Carg27846 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27846
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	polypyrimidine tract-binding protein homolog 3
Location	Carg_Chr01: 6346212 .. 6357739 (+)
RNA-Seq Expression	Carg27846
Synteny	Carg27846

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAGGATGACTGAACCATCAAAAGTTATTCACGTCCGAAATGTTGGTCATGAAATATCCGAGGTCCGTTCTCATTCTCTCTCTCTCGCAACTTCAAATTCAATTGATAATTTTTTAATTTTGAATCATCTCTGCAAATGTGTATTGGTAGATGAGCTATTGCCATGGCAAATGCCATGTTGGATGTCTTACGATTGTTTATAACCAAGATAATGGCTGGTCTATGCTTCACTTGAGGCTAAGTTACCTTGAAATTATGATTGCTCTTGATGTAATTTACATCCATTTTTTTGTTAAAGAACCATTCTTTCATTAAAAGAATGAAAGAATACAAGAGCATTCAAAAGACAAGTCTCTACAAAGAAAAGGGAGTCCAACCCGACCTACATAAATCGACTCCATTTCAAAAGAACAATGCCAAGATCATAATTACAAAGACAATTAGAGATTGAATCTCACAAGGATTCAGAAGTACCTTCTTCATCGTAGGTATCTCATCTTCAATTCATGCCCCACAAACCTCGAATGAACTCCACCAACGATCCCAAAGGTTGAACTGACACTCAAGGCAGTAGGTTATTAGACTTCCGAAAAACAATAAATTTGTAAAATCCATTTTTAGGCTCATGGTTTCTCGGAAAACCATAATATTTAAATTGAAAATCTCCATTTGCTTCTCTAATTTCTCTATTTTCTTAAATTGACACAAAACCTGGGGTTTGATTCCAAAATTGATGCAATGAATCAAAAGAAAGAAATCATCAAAAATCTCAACCAAAACATTTACTAATGTTCAGAAGTATATAAATGTGAGAGATTAACTGAAACCAACTAAACTAACTATCATTATTAATAAATTCAGACAAAATTACCAAATAACTCCTAATTATACTTAACGTACGCTACATCATGATAAATAGTTTGATATTTCTATTTGTATCCTTCAGCATTTTATTTCTTTCCATCAAACAATGAGAACTTATTTCTTCTTTCAAAAATAGTTGAACGTTGCTTTGTTGCTTAAAGTAGACCATAAATTGATATATGATTGTGTTAGGTTAGCATACTTGGTGCATTGGGTATTGGTTTGGCTAACATAGTATCGATGTACTTTTTCCTTAGCGAATGGTACAAAACCAATTATTCAGGAGTGAGTAAGTGTTGGGAAGCTCATGGCAAAATTTTGTCTGTGTTTATCAGAAATAAATGCAATAATCCTGTTACAATCTTTGGATATCCAAGAATATATAATCATTTTCTAGCAAAGCAAATATTACCTCAAATATATATATAATTTTTTTTTTTTTTTTTGTTGATCAAAGGTAATATTTCAAAGAGATCTATTTTGAGGGTGGCTCTTTATTGTAATGTCTGCAATTCAACTTTTATTTGTATTATTAATGAATTAATGTGTATCTTTGCACATTCTCCCATCTCTCCCGACTTTTTATATCTGTTGACTCCTTTTACATTCTTGCAGAATGATTTGCTTCAGTTATTCCAGCCATTTGGTGTCATAACTAAGCTTGTGATGCTTCGTGCTAAAAATCAGGTTTCATTTAACTCTGATACAGTGACGTCTGATGTTGTCCTATATTTGAGCTAAAGTAGAATATTCATCGTTTTGTCATTTTATCATGAACTCAGGCTCTTATCCAGATGCAAGATGTTCCCTCAGCAGTTAGTGCTTTACAGTTCTTTGCGAATGTTCAACCGAGCATTAGGTATATACTGTTAAAATATATCCTTGAAAATTTGATTTATGTTTTTTATGGGTAGTATTATCATAAGTTGCAGTAGCATGTATTAGTATTATAATCGAGCTCCAATTGTGAAAGTATATAGCAGGAAGGGTGGAGGGTGCATCTGTTAAATAGTTAGGACTCTGAAATATGAGAGGTCTATTTGTAATTTGCAACCGAGAGTGCTGAAGTAAGAGCGATCCTTTAGCTAGTGCTTAGGAGGGGGAGGGGTAGGAGGGAAGTGGAGCAGTTGCTGTCAAATTTTTGCAATACCTAAAGTTAGATCGTTATTTGAAAGTTAATCGTAGTTGTTTTTTTTACACTAAAATCAGTGCTCACTCAAGGTCATTGGGTTCAGAATTAGTGTACTTTTTTCAGTTTTTGGTTACGTTATAATAAGTTGGTACTCTTTTAATAATTTTTCATTTCATCAATAAAATTCTATTTCCTTAAAAGGAAAAAGAGATGGAAACAAGATTAAATGCACTTGAGGAAAAGATAGTGCGCAAGAATCTATTGGGAGCAGTTGAATTAGTTGTTTAAAGAAGGAAGAGGTGTTAGCTCATATTTGAGGAGCCTAAAGTAATAGGGTCAACGAACAAGAAGGAAATGAAGGGAAAGGCAGAATAGGAGCCCTTTCCTGTAATTGTGTTGTTTGTTAGTTTTTTTCCCTTTGGCCTTTTTCATTGGCATTCCTTTTTTGATAAATTTCCCTTGTTTAGTCTTTGGTTCTTCTCATTATGAAGTTTTGTTCTTAAATAAAGTAGAGACATGGGACAGGCACTCTCAAGAGCAGGGCATACTGAAATGATGGATGGAGGGTCTACTAGTAGAACTACTAAGTTCTTGCTGCCAAATGATGTATGATTGAGGAAACTCAAGGTGACTTATTCAATTGAGCTAGATGACAAATATAGGGGAACAGGAATAAAGCTATCTGAGATCATCAGAGGCAATTTTTTTTTTTCATATTTCTAAAATGGGACTCTTTCTAATGGCATCATTTGATCAACCCCTGCCGTTGGCTTCACTGAACCAAAATTTCTTCCCAGAGAAACATTTTTTTTAGAACAAACCATTTGGATAGAGCAACCCACTAACAAGAAGGGCACTATGTGAATTATCTCACTCCATGGAAATGATGGTCTTAATAAATTTTTTATTCTAGTGGGTGAAAAATGAAAAGGATGGACAACTTTTCTCAACCTCATTGAAAATGATCCTTCTTCATTCATTAAAAACCCAATCAACTTCGGATTCGAAAGCAGAACAATAAATATTTTCTCCAACCCTCACAACCCATCATTAACAAACCATCACAAAGGCCTGAAAATCTAGAGGCAAATATAGAAACGTACCATTGATCCTCAACAAAAAGGGCAAGACCGTCATTGCAAAGGTTCCCCTCTCCACCATCCCTATCCTATGGGATACAGTGGTGACCATTACTCAGAAATGCTTCTACAACCAACGATTTCCATGATCTAATTCCTTTCAGGGTGGACAAGGCAATCCTCCATTGCATGACAAAGGAGTAGGTTTCTTTACTTGTAACAAAAATGATTGGCAAAATGTGGGAAGCTTTCGGTTGAAAATAGAATCATGGTCAGATGAGGAACACTTGAACAACCTAGTGGTTCCTTCATATGGAGGTTGGATTAAAATAAAAAATCTCTCTTTCAACCGTTGGATCAAGGAAAACTCATGGGGTTTCATACCAAAGATAGTTTTTCTCCCATCATCATAAAAAACTCCTCTTTTGGTCAACGTAGTCCATTGTTTCCATGAAGATTTTTTTTGTTGATTATATGACCGAATATCATGGCACCGAAGCGGCATTGAAAGGAGGCATACTTGGGATATCATTCAACCCTCTAAGGTTCATCATCTAAAGGGACTTTTCATGTTCAACATGACTCAACAACCTTCAGTTTATACATCGTAGAGACAGAGGCCATACCTCAAAGCCCTATAAAGGCAAACACCGTCCCCTCATTCATAGGCTGCCCCCATCTTTCCAAGCCCATCCCTATTAAGAAAAAAAAGAAGCCAAACCCCCTAACCAAATCCAACTCCCTCACCTACCTATCGGCCTTTCTTCATGGGCCTATAGCTACCTTAATTGACCTGCCCATCTCTACATATAAAAGCCCACCTCCACACAATCCAAAGGCCACCAACCCCCACCCCACCTTTTGCCAACCCATCTATTTCACCTCTTTATACCCCCGATCTACAAGTTGTGACATCTTCACTTGAAAATCATGCGCTACCATTAGAAACCAAAAAATCTTCCTTGTCTTAGGAACAAAATTCCCTACCCTTGACTCCCTCCAAGACTTTGACGATGATTACACATCTAGCCCTCTCTCCCTCTCCACATCCCCCCACCCCCTACCGTGGGTGTGCCCAATCCCACTCCCCCGCCGCTAGAAATTGTCCTTGCAAATACGAAACTTGACACTATTCTTCAAGAAAAGTTTAGGATGAACTTGACACTATTCTTCAAGAAAAGTAGGATGAAACAAAGGTAGAAGAAGTCTCCCCCATCTCGGCAAAATTCACACCTAAAACGACAGTAGGATGAAACAAAGGTAGAAGAAGTCTCCCCCATCTCGGCAAAATTCACACCTAAAACAACCATTTGAATCTTTGCACCATGGCTAAAAGAACATCACATGTGCATCATGGCCATTCCATGTGGAAAAAAAGCGCAGTACAACCAAGAAATAGAGTAAACTAACTTGGGAGATTGTTGGCCTCCTCTCGAATATCAATTATGATAATCCAACCTATCTCAATCGAGTGGCTTGGGAGACTGGCAGAAGAGAGCCCTCATCAAGACCTTCCTCTAATACAATCCCACCATGATCATTCTTGAAGAAACAAAATTCAATTTTGTTGACCGTTAGATTGTTAAATTCTTTTGGAGTGCTAGACATATTGATTGCACATCTTTGGATGCCTCCAAAACACCGAGGGAATCTTAATGATGATGTTGAATGACCCAACTCAGATCATCTCTGAAGTCACTAAAGGTCTATACACCCTAATCACATATATTTCTTTGGCTGACGGTTACAATTTTTTGAAATATGGGATCCATGGCTCTAAAACTACCAAGAAAGACCGCTCTTCTGCTAGGAGGTAGAGGACTTCTCGTCTTTGTATAGAATATTTGCTTCTGGCTAGTGACTTCAATGTCTCTCGGTGGGCACATGAAAAATCTAATAGAGAAGTTATCGGAGGCATGCGACATTTCAATACTTTCATAAGAGAAGTTGTACTCATTGATATTTTCCTTAGTAATGGTATTTATACTTGGTCGAACAACAAACCATCGCCCACCATGATCATTAACAGATTTTTGGCTACCAAAGGTCTCCTAGGAGAATTTAGTAATGCTTGTGTTCGAAGGCTGAATAGACCCACATCGAAACATTATCCTATTGTACTTTCCATGGGTTGCATCAAATAAGGCACCTTGCCCTTTTTGTTTTGTGAATATGTGGCTGGATTATTAATTTCTTGCTCACAGTAGAATACTAATGGAAGAGTACATGCCTCCGTAGATGGCTGGGACACGAATTCATTAACTAACTCAAAGGGCTAAAAGAAGTCATCAAGAAATAGAACAGAAAGGAAATTGGACCTATCACATTGGTTCAACATACACATAAGAAGCTCATTAAAGTAGAACTCATCTTTTTGACAGCAATATTGGAGAAAAAAGTATAAAAAACCATGGCTTGAGGAGGGTGACATAAATTCCATATTTTCCCATTACATTATGGCTTCAAAGAAATGAAAGAGTACCATCATGGAAATTCTTTCGACAAGGGGATCCATTATCCCCTTTTCTTTTCATAATAGTAATCGATTGCCTTACCCACTTACTCACCAAGACCAAATATGAAGGCCAGATAAAGGGCTTCCATGTTGATAACAAAGGCTCAACCACTTGTAGTTTGCGGATGACACAGTTCTCTTCAAATATCTCCTCCACAAAATCATGTTTGATATAGTGGAAACCTTTGAAAGGTTCTAGAGATAAAACATCAACCTCAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAATAAAAAACAGAATCATGGGCATCAATATTAGGATAGAGGACATTGACAACATTGTCAACAAATATGGTTGTAAAAAAGGTGAAGGACCGAATATGTACATGGGATTGCCCTTAAATGGGAGCCCTAATTTCTTCTCCTTTTGGAAAACCGTCATTGAAAAAATAGGAAGAAGGTAATCAACATGGTCATGTTACACACTTTTAAAGCTCGACAACTCAACCTAATACAAGCCACATTGTCTAACCTTCCTACTTACTACATGTCTTTATTCAAAATGCCTCACAAAGTGACTATGAGAATAGAAATATTATTAAGAAACTATCTTTGGAATGAAGGTTCACATCTTGTCTAGGGAGGTATTGGCCTATATTCGATGAAGGAGAAGAATAGAGTCCTCCTTGTCAAATGGATATGGAGATATTATCAGGAAGGAACTGCCTTGTGTAGAAATCTTATAAAGGCTAAATACACTCCTACATCATGTACAAATCGGTCCTCCATCTTCTACAAAGGGGCCATGGAAGTACATAAAAAAGCACTAAAATCTCATCACTAGCCACATTAGCCATAGAGTGGGTGATGGAGGAAATACATCTTTTTGGAATGATCCATGGATTGACAACACCATGCTAGCTTCGTGATATTTTCTTTTGTATAGACTCTCTCATTGCATAATGGCCACGATCAAAGAAACATGAATAGATGTCAATAAATTCTAGGACCTATATCTTCGTAGGAACCTAAAGAATAAGGAAGAATGAGCCGAATTAAGTCTTGACCTCGCCCCAATTGTGCTGTCCCAAGAAGTAGACTCATTGAAATGGTTTCTTAGTGTAGATGGGGTCTTCTCCACTAAATTTTTTATGATGGATAATGGAGGAAAAGGTAGAAGCCATAAAACCCACTAGCGAAGACAATATGGAAAGGAAAATCACCCTAAGAAGGTGAAGTTTTTCCTATGAGAAATGGTGCACTAAGTCATTAGTATAAGTGAAAACTTACAAAAGAAAAAAAAAAAAAAAAACCCTACATGACTCTTTAAGCAAGAAAGACACGAATCACAAAACAACGGTTTATGCTTATAATATTTGGATAAAGATCTTCAATATCTGCAGATGGTACATCATTTTTCCTAGAGAGATAAAAGAGTTATTGGACATAGTCTTAACGTACCACCCATTCAAGAATGTCTCTTTTGAAATACACGGAGAAGACATAGACTTATTTTAGGCTCCTTTGAAATGTTGTTTACCACGCCATTTATTGGGGTAAATAGTCTAACACATGCTTTTTAAGTTATATCTCATTCATGGTATTGTGAAGGTCTTTTTTGAGCATCACGGATAACTCATCCTTTTTGTAAATTTCAAACATCAATGAAATTGTTTCTTATAAGAAAAAAGTTTTGATACGTTATAAAGATGCTTAATCTAAGATGGAACGTGGGAGCATGCCTCAACTAAGATGCAACTTGGGAACATGGTCCTACCGTTCACTTTCATGGCGAGGTGGCCTTTGAGGGGCTGGATAGTCACAGGCCCTGATTCTAAAAGTAAACATTAGGGAAAGGGAAGGTATTCATCTACTAAGTAGTTAACTAGAATTAGGGATCTCTTCTGTAAAAGAGTAATCTCAGCTAATACTTTAGGGACTGCAAGAGAGAGAAGGTACTCTTTCGGTAGTTGCTTAGGTTGTGAGTCAAGAGAACTTGGGATCTCTTCAATCATCATCCTTTGGCTATTTTTCTTTCTAGTAAATAAAGTGTGTTCTATCATTTCTTTCCTCCAAATCTAGTCTTAGATGAAGCATGTAATGTTTGAATTCTTTTCTATTCTTCAGGGGGAGGAATGTTTATGTCCAGTTTTCATCACATCAAGAGCTAACTACAGCAGATCAAAATGCTCAAGGACGAGGAGATGAGGTTTGCAACTATTTACCTTACTTTTTAGAAGGAAAGTGCTTAGTTATCTTGATGGGAACCTTGAAATGACTAAGGCAGAAATAGACCTCTATAAATATGTAAAATGAATTCGAGCATAGTTTTTGTTTTGAACACCCAGTAGCCATAACACCATATTAAGTTTTGCAGATATGTGAAAGCATGAGCATGACCGATTTTCATTTTCAGCCTTATACCATGCAGGAGAATCTCTCTTGCTTCTAATAGCATGGTATACTAAATCTATTTTAGGACCATGCTTTTCCCTTTTTTCCCTCCTTTGGACTTGTTAGATACGGAAAAATATTATTTTGATGAATTGAGGTTTGACTTGTAGCAACAATTCTCAAATCTTGAACTGCAATATATGATATTTTAATAAACGTTCCTCCTAAGCTTGATAAAATCTTTTTTTGTACGGTTAGTCAAATAATTTATGTGCATATTTTGGAATAATTGTCAAATTTTTTGTTCAATACCCACTTTTACATTTGTTCAATACAATAATCTTTTATTGTATGCTTCCTCTTTTTTTATTTGTTTTTCTTTTTTGAATTCTGAATTCAATTGTTTATTATGAAGTTTTTCTAGTGATATAAATTGATCCTAGTTGAATCATACGGCCGTGATTCTAATTTTACCCTCATGCACTATTATTTTTTCCTCTCCATGTCAAAAAGAATTATTGATAACTTGACATGTTAGGCTGGTTAATGAGCCCGCATGTGAAATTAGTGGAATATAAGAATGAATTGTTTAAGTTTATTTTAGTTAAACAGAAAAAGCTTTTGGTATTAGGGTTATTTGCTATTCTACTAATCAGTAACCATTACCCAACACCTAGATCTTCGCTTAGCAAAATTGCTGGTACTCTAACTTTAGAAGAACAATTGTAATATTTTTGGAATTCTTTTCCTTCTCAATTTATTTCCTTCTCTCTCATCCTTCTCCATGTGAATACACTCTTGGTCACTCTCTGAAGCAGCCAAATCGAATACTCTTAGTCACAATCCATCACATGCTATATCCCATTACAGTGGAAGTGCTGCATCAAGTGTTTTTCCCACATGGATTTGTGGAGAAGATCGTGACATTTCAGAAGTCAGCTGGTTAGATTAAGTTCTCTCTTCTCCCCCCTTTCTCATATCATCACTTAATACATGGATTTATTGAAATTCTTTTCTTTTTGTGTTGTTCTTTCTTTCCTTTCTCCCTTTTCGGGTTAATTGAGGGCGAGTTTCCCTTTTGCAATTATGATTGGGCCTCAAATCAAAATTAAGCGGTTTCGTCTAGAACTTGTTGCCAAATATGTTGTTGCTTTCTACTGCAAGTATTTTTTTTTTTCTTTTTAAGTGAGTCTTCAGACTTATGCATGATTATCCTTTTTTCGTTTATGTAGGTTTTCAGGCCCTTATTCAGTATCAATCTCGCCAGTGTGCTGTTTCTGCTAGGACTGCATTACAGGTAATACTATATTTTGTTGTACCAGTCACTTCAAGCTTGATCCTTTCTTTAAGAAGTTTTTGTCCTGATTTATTTACCTAAAAGATGGACACTTCTGCTACTCCTGTAGGGGCGCAATATATATGATGGTTGCTGTCAGCTAGACATTCAGTTCTCCAAGTAGGTTCTATAACTAATCATGATATGCTTGTGATGTTCTCTCTCTTTACTTGGTCAATTATAGATTATGGGTTTCTTGTGCAGTCTTGATGAGTTACAGGTGAACTACAATAACGAACGTTCAAGGTTTGTAGCATGCCTAGTCCCCCTTATTTTTTTTTTCTTGTTTGCATCTTGGATTCTATTAGTATGGATATTTCTTCTTGATATTGTTCCAGGGATTTCACAAATCCTAATCTGCCTTCTGAACCAAAAGGCCGGCCATCGCAAGTATGTAGCACCACATATTAATCTCCTACAATGTTGGCTCCATTCTTTCTGAAATCTTATTTTTCTTATCTTGGATGTGCAACAGCCTGGATATGGCGATGCAGGTGGCATGTATGGAGTTCAAGCATCTGGAGCAAGACCAGGTGCTGACGTTTTCTATTATATAATGGATGCATATAGAAACCCAATTCGATTAGTTGAATTGAAAGAAATTGCTTCATATATCTTTGCTTTCATCGTCATAGATTGACTTCCTTGTCAGAAAACCTATATACTTACCTTTTTTTCTTCTTCTTTTTGGTTTCAGTTGCACTACCACAGGTGTGTTTTGCTCCTGTCAAACATATGGTTGAGATGATTGAAGAAAACCGACTATTAAGATGGTTCATTTATTATTAGGGTTTTTCTTTATTTTTGGAATAATATATTAATCCTATTGCAAGGATTATACTTTCCACAAGATCCTTTAGCTTTGTGAACTGGAATGTTCTTGATGAATATGGTTGACTACATTGTGGAATTCTTGAATTAATTTAAGATCTAAAAGTTTGTCGACATCATTGCCTATTATTGTTGAAAATATGTCTTGTTTACATGATTTTCAGATGGCAAACGCAGCTGCTGTTGCTGCTGCATTTGGAGGAGGTTTGCCACCTGGTATTAGTGGGACAAATGACAGGTGTACAGTCCTTGTGTCCAATCTGAATCCTGATGTGAGTAGTATTCTTTGTTCTTTGTTCTTTGTTAGACTCCTGTTCAAGTTTTTATTTTCATGGTTGACACCGCCGTTAATTTGTTACAGCAAATTGATGAAGACAAGCTTTTTAACCTTTTCTCCATCTACGGTAACATTGTAAGAATTAAGCTTCTCCGAAATAAACCTGATCATGCACTTGTTCAGATGGGAGATGGTTTCCAGGCGGAATTAGCTGTGCACTTTTTGAAGGTTTGTTGTTTCTAAATTTCTCGTCTGAAAGGCCTAACTTCGTATGTTAACTTCGTATGTTCAAGGCTTTTGGTTTCTTGGGTGTCAATTGCCTCAGAATACTTTTGAATTTTTATATAGGGAGCGATGTTGTTTGGCAAGAGATTGGAGGTTAACTTCTCAAAGCATCCTAACATTACGCAAGGGGCTGACACTCATGAATACGCCAACTCAAATCTTAATCGTTTTAACCGAAATGCTGCAAAGAACTACCGTTACTGCTGCTCTCCGACAAAGATTATCCACATTTCATCTCTATCCCAGGAAGTAACTGAAGAAGAAATTGTGAATTTACTCGAGGAACACATGCCGATTGTCAACACCAAGCTCTTCGAGATGAATGGGAAAAGGCAGGCACTCATCATGTTCGACACTGAGGAGCAGGCCACCGAGGCTCTTGTTTGCAAGCACGCTACTTCGCTTGGTGGGTCAATCATTCGCATTTCATTTTCCCAGTTGCAGACTATATGAAGTTAGGAAGGGATTCGTAATGCGAATTTTAAAAATGAAGATGATGGCGCATATTGTTTTGATTCTTGTAACAATTAATTTGTGTTTGGATTTCTTGTGGGATTGTACTCTTTCTGCTTTGTTGTCTCAATTCTTCTCTTCTCATCTCATCTCATCTCTCTCTTCTCCCCTTGGGCTTGTTGAAATCATTCTTAGACGCCTTCCAACGGAGTTAGATTTTGGTTTTATGCTCAGTTTTGAAGAGAATTAGGAAGAAGGAAAGCTAACCTGCCTTTTTTTTTTTTTTGAGTTGAGGATATCTTCGTTAGGTGGTATGTACATGGGCCTTGTATTTTTTGGCAAGTCAGGCCATTGGCTGTTGTAATATCAGTTCATAGTACGCTTAAATCTCTTCTACTTA

mRNA sequence

TTCAGGATGACTGAACCATCAAAAGTTATTCACGTCCGAAATGTTGGTCATGAAATATCCGAGAATGATTTGCTTCAGTTATTCCAGCCATTTGGTGTCATAACTAAGCTTGTGATGCTTCGTGCTAAAAATCAGGCTCTTATCCAGATGCAAGATGTTCCCTCAGCAGTTAGTGCTTTACAGTTCTTTGCGAATGTTCAACCGAGCATTAGGGGGAGGAATGTTTATGTCCAGTTTTCATCACATCAAGAGCTAACTACAGCAGATCAAAATGCTCAAGGACGAGGAGATGAGCCAAATCGAATACTCTTAGTCACAATCCATCACATGCTATATCCCATTACAGTGGAAGTGCTGCATCAAGTGTTTTTCCCACATGGATTTGTGGAGAAGATCGTGACATTTCAGAAGTCAGCTGGTTTTCAGGCCCTTATTCAGTATCAATCTCGCCAGTGTGCTGTTTCTGCTAGGACTGCATTACAGGGGCGCAATATATATGATGGTTGCTGTCAGCTAGACATTCAGTTCTCCAATCTTGATGAGTTACAGGTGAACTACAATAACGAACGTTCAAGGGATTTCACAAATCCTAATCTGCCTTCTGAACCAAAAGGCCGGCCATCGCAACCTGGATATGGCGATGCAGGTGGCATGTATGGAGTTCAAGCATCTGGAGCAAGACCAGTTGCACTACCACAGATGGCAAACGCAGCTGCTGTTGCTGCTGCATTTGGAGGAGGTTTGCCACCTGGTATTAGTGGGACAAATGACAGGTGTACAGTCCTTGTGTCCAATCTGAATCCTGATCAAATTGATGAAGACAAGCTTTTTAACCTTTTCTCCATCTACGGTAACATTGTAAGAATTAAGCTTCTCCGAAATAAACCTGATCATGCACTTGTTCAGATGGGAGATGGTTTCCAGGCGGAATTAGCTGTGCACTTTTTGAAGGGAGCGATGTTGTTTGGCAAGAGATTGGAGGTTAACTTCTCAAAGCATCCTAACATTACGCAAGGGGCTGACACTCATGAATACGCCAACTCAAATCTTAATCGTTTTAACCGAAATGCTGCAAAGAACTACCGTTACTGCTGCTCTCCGACAAAGATTATCCACATTTCATCTCTATCCCAGGAAGTAACTGAAGAAGAAATTGTGAATTTACTCGAGGAACACATGCCGATTGTCAACACCAAGCTCTTCGAGATGAATGGGAAAAGGCAGGCACTCATCATGTTCGACACTGAGGAGCAGGCCACCGAGGCTCTTGTTTGCAAGCACGCTACTTCGCTTGGTGGGTCAATCATTCGCATTTCATTTTCCCAGTTGCAGACTATATGAAGTTAGGAAGGGATTCGTAATGCGAATTTTAAAAATGAAGATGATGGCGCATATTGTTTTGATTCTTGTAACAATTAATTTGTGTTTGGATTTCTTGTGGGATTGTACTCTTTCTGCTTTGTTGTCTCAATTCTTCTCTTCTCATCTCATCTCATCTCTCTCTTCTCCCCTTGGGCTTGTTGAAATCATTCTTAGACGCCTTCCAACGGAGTTAGATTTTGGTTTTATGCTCAGTTTTGAAGAGAATTAGGAAGAAGGAAAGCTAACCTGCCTTTTTTTTTTTTTTGAGTTGAGGATATCTTCGTTAGGTGGTATGTACATGGGCCTTGTATTTTTTGGCAAGTCAGGCCATTGGCTGTTGTAATATCAGTTCATAGTACGCTTAAATCTCTTCTACTTA

Coding sequence (CDS)

TTCAGGATGACTGAACCATCAAAAGTTATTCACGTCCGAAATGTTGGTCATGAAATATCCGAGAATGATTTGCTTCAGTTATTCCAGCCATTTGGTGTCATAACTAAGCTTGTGATGCTTCGTGCTAAAAATCAGGCTCTTATCCAGATGCAAGATGTTCCCTCAGCAGTTAGTGCTTTACAGTTCTTTGCGAATGTTCAACCGAGCATTAGGGGGAGGAATGTTTATGTCCAGTTTTCATCACATCAAGAGCTAACTACAGCAGATCAAAATGCTCAAGGACGAGGAGATGAGCCAAATCGAATACTCTTAGTCACAATCCATCACATGCTATATCCCATTACAGTGGAAGTGCTGCATCAAGTGTTTTTCCCACATGGATTTGTGGAGAAGATCGTGACATTTCAGAAGTCAGCTGGTTTTCAGGCCCTTATTCAGTATCAATCTCGCCAGTGTGCTGTTTCTGCTAGGACTGCATTACAGGGGCGCAATATATATGATGGTTGCTGTCAGCTAGACATTCAGTTCTCCAATCTTGATGAGTTACAGGTGAACTACAATAACGAACGTTCAAGGGATTTCACAAATCCTAATCTGCCTTCTGAACCAAAAGGCCGGCCATCGCAACCTGGATATGGCGATGCAGGTGGCATGTATGGAGTTCAAGCATCTGGAGCAAGACCAGTTGCACTACCACAGATGGCAAACGCAGCTGCTGTTGCTGCTGCATTTGGAGGAGGTTTGCCACCTGGTATTAGTGGGACAAATGACAGGTGTACAGTCCTTGTGTCCAATCTGAATCCTGATCAAATTGATGAAGACAAGCTTTTTAACCTTTTCTCCATCTACGGTAACATTGTAAGAATTAAGCTTCTCCGAAATAAACCTGATCATGCACTTGTTCAGATGGGAGATGGTTTCCAGGCGGAATTAGCTGTGCACTTTTTGAAGGGAGCGATGTTGTTTGGCAAGAGATTGGAGGTTAACTTCTCAAAGCATCCTAACATTACGCAAGGGGCTGACACTCATGAATACGCCAACTCAAATCTTAATCGTTTTAACCGAAATGCTGCAAAGAACTACCGTTACTGCTGCTCTCCGACAAAGATTATCCACATTTCATCTCTATCCCAGGAAGTAACTGAAGAAGAAATTGTGAATTTACTCGAGGAACACATGCCGATTGTCAACACCAAGCTCTTCGAGATGAATGGGAAAAGGCAGGCACTCATCATGTTCGACACTGAGGAGCAGGCCACCGAGGCTCTTGTTTGCAAGCACGCTACTTCGCTTGGTGGGTCAATCATTCGCATTTCATTTTCCCAGTTGCAGACTATATGA

Protein sequence

FRMTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQFFANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDELQVNYNNERSRDFTNPNLPSEPKGRPSQPGYGDAGGMYGVQASGARPVALPQMANAAAVAAAFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATEALVCKHATSLGGSIIRISFSQLQTI

Homology

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BLAST of Carg27846 vs. NCBI nr
Match: KAG7037205.1 (Polypyrimidine tract-binding protein-like 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 882.5 bits (2279), Expect = 1.5e-252
Identity = 446/446 (100.00%), Postives = 446/446 (100.00%), Query Frame = 0


Query: 1   FRMTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSAL 60
           FRMTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSAL
Sbjct: 1   FRMTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSAL 60

Query: 61  QFFANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLH 120
           QFFANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLH
Sbjct: 61  QFFANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLH 120

Query: 121 QVFFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLD 180
           QVFFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLD
Sbjct: 121 QVFFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLD 180

Query: 181 ELQVNYNNERSRDFTNPNLPSEPKGRPSQPGYGDAGGMYGVQASGARPVALPQMANAAAV 240
           ELQVNYNNERSRDFTNPNLPSEPKGRPSQPGYGDAGGMYGVQASGARPVALPQMANAAAV
Sbjct: 181 ELQVNYNNERSRDFTNPNLPSEPKGRPSQPGYGDAGGMYGVQASGARPVALPQMANAAAV 240

Query: 241 AAAFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHAL 300
           AAAFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHAL
Sbjct: 241 AAAFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHAL 300

Query: 301 VQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKN 360
           VQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKN
Sbjct: 301 VQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKN 360

Query: 361 YRYCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQAT 420
           YRYCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQAT
Sbjct: 361 YRYCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQAT 420

Query: 421 EALVCKHATSLGGSIIRISFSQLQTI 447
           EALVCKHATSLGGSIIRISFSQLQTI
Sbjct: 421 EALVCKHATSLGGSIIRISFSQLQTI 446

[Close]

BLAST of Carg27846 vs. NCBI nr
Match: XP_023525438.1 (polypyrimidine tract-binding protein homolog 3 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 875.2 bits (2260), Expect = 2.5e-250
Identity = 443/444 (99.77%), Postives = 443/444 (99.77%), Query Frame = 0


Query: 3   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF 62
           MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF 60

Query: 63  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV 122
           FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV
Sbjct: 61  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV 120

Query: 123 FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL 182
           FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL
Sbjct: 121 FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL 180

Query: 183 QVNYNNERSRDFTNPNLPSEPKGRPSQPGYGDAGGMYGVQASGARPVALPQMANAAAVAA 242
           QVNYNNERSRDFTNPNLPSEPKGR SQPGYGDAGGMYGVQASGARPVALPQMANAAAVAA
Sbjct: 181 QVNYNNERSRDFTNPNLPSEPKGRSSQPGYGDAGGMYGVQASGARPVALPQMANAAAVAA 240

Query: 243 AFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ 302
           AFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ
Sbjct: 241 AFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ 300

Query: 303 MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNYR 362
           MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNYR
Sbjct: 301 MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNYR 360

Query: 363 YCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATEA 422
           YCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATEA
Sbjct: 361 YCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATEA 420

Query: 423 LVCKHATSLGGSIIRISFSQLQTI 447
           LVCKHATSLGGSIIRISFSQLQTI
Sbjct: 421 LVCKHATSLGGSIIRISFSQLQTI 444

[Close]

BLAST of Carg27846 vs. NCBI nr
Match: XP_022932099.1 (polypyrimidine tract-binding protein homolog 3 isoform X2 [Cucurbita moschata] >KAG6607582.1 Polypyrimidine tract-binding protein-like 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 874.0 bits (2257), Expect = 5.5e-250
Identity = 442/444 (99.55%), Postives = 443/444 (99.77%), Query Frame = 0


Query: 3   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF 62
           MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF 60

Query: 63  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV 122
           FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV
Sbjct: 61  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV 120

Query: 123 FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL 182
           FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL
Sbjct: 121 FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL 180

Query: 183 QVNYNNERSRDFTNPNLPSEPKGRPSQPGYGDAGGMYGVQASGARPVALPQMANAAAVAA 242
           QVNYNNERSRDFTNPNLPSEPKGR SQPGYGDAGGMYGVQASGARPVALPQMANAAAVAA
Sbjct: 181 QVNYNNERSRDFTNPNLPSEPKGRSSQPGYGDAGGMYGVQASGARPVALPQMANAAAVAA 240

Query: 243 AFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ 302
           AFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ
Sbjct: 241 AFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ 300

Query: 303 MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNYR 362
           MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNYR
Sbjct: 301 MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNYR 360

Query: 363 YCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATEA 422
           YCCSPTKIIHISSLSQEVTEEEIVNLLE+HMPIVNTKLFEMNGKRQALIMFDTEEQATEA
Sbjct: 361 YCCSPTKIIHISSLSQEVTEEEIVNLLEQHMPIVNTKLFEMNGKRQALIMFDTEEQATEA 420

Query: 423 LVCKHATSLGGSIIRISFSQLQTI 447
           LVCKHATSLGGSIIRISFSQLQTI
Sbjct: 421 LVCKHATSLGGSIIRISFSQLQTI 444

[Close]

BLAST of Carg27846 vs. NCBI nr
Match: XP_022972881.1 (polypyrimidine tract-binding protein homolog 3 isoform X2 [Cucurbita maxima])

HSP 1 Score: 870.9 bits (2249), Expect = 4.6e-249
Identity = 441/444 (99.32%), Postives = 442/444 (99.55%), Query Frame = 0


Query: 3   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF 62
           MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAV+ALQF
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVNALQF 60

Query: 63  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV 122
           FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV
Sbjct: 61  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV 120

Query: 123 FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL 182
           FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL
Sbjct: 121 FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL 180

Query: 183 QVNYNNERSRDFTNPNLPSEPKGRPSQPGYGDAGGMYGVQASGARPVALPQMANAAAVAA 242
           QVNYNNERSRDFTNPNLPSEPKGR SQPGYGDAGGMYGVQASGARPVALPQMANAAAVAA
Sbjct: 181 QVNYNNERSRDFTNPNLPSEPKGRSSQPGYGDAGGMYGVQASGARPVALPQMANAAAVAA 240

Query: 243 AFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ 302
           AFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ
Sbjct: 241 AFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ 300

Query: 303 MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNYR 362
           MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADT EYANSNLNRFNRNAAKNYR
Sbjct: 301 MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTREYANSNLNRFNRNAAKNYR 360

Query: 363 YCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATEA 422
           YCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATEA
Sbjct: 361 YCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATEA 420

Query: 423 LVCKHATSLGGSIIRISFSQLQTI 447
           LVCKHATSLGGSIIRISFSQLQTI
Sbjct: 421 LVCKHATSLGGSIIRISFSQLQTI 444

[Close]

BLAST of Carg27846 vs. NCBI nr
Match: XP_023525437.1 (polypyrimidine tract-binding protein homolog 3 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 870.5 bits (2248), Expect = 6.1e-249
Identity = 443/445 (99.55%), Postives = 443/445 (99.55%), Query Frame = 0


Query: 3   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF 62
           MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF 60

Query: 63  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDE-PNRILLVTIHHMLYPITVEVLHQ 122
           FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDE PNRILLVTIHHMLYPITVEVLHQ
Sbjct: 61  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEQPNRILLVTIHHMLYPITVEVLHQ 120

Query: 123 VFFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDE 182
           VFFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDE
Sbjct: 121 VFFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDE 180

Query: 183 LQVNYNNERSRDFTNPNLPSEPKGRPSQPGYGDAGGMYGVQASGARPVALPQMANAAAVA 242
           LQVNYNNERSRDFTNPNLPSEPKGR SQPGYGDAGGMYGVQASGARPVALPQMANAAAVA
Sbjct: 181 LQVNYNNERSRDFTNPNLPSEPKGRSSQPGYGDAGGMYGVQASGARPVALPQMANAAAVA 240

Query: 243 AAFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALV 302
           AAFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALV
Sbjct: 241 AAFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALV 300

Query: 303 QMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNY 362
           QMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNY
Sbjct: 301 QMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNY 360

Query: 363 RYCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATE 422
           RYCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATE
Sbjct: 361 RYCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATE 420

Query: 423 ALVCKHATSLGGSIIRISFSQLQTI 447
           ALVCKHATSLGGSIIRISFSQLQTI
Sbjct: 421 ALVCKHATSLGGSIIRISFSQLQTI 445

[Close]

BLAST of Carg27846 vs. ExPASy Swiss-Prot
Match: Q6ICX4 (Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g43190 PE=2 SV=1)

HSP 1 Score: 742.7 bits (1916), Expect = 2.5e-213
Identity = 370/444 (83.33%), Postives = 402/444 (90.54%), Query Frame = 0


Query: 3   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF 62
           M E SKV+HVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQAL+QMQDV SAVSALQF
Sbjct: 1   MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQF 60

Query: 63  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV 122
           F NVQP+IRGRNVYVQFSSHQELTT +QN  GR DEPNRILLVTIHHMLYPITV+VLHQV
Sbjct: 61  FTNVQPTIRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHMLYPITVDVLHQV 120

Query: 123 FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL 182
           F P+GFVEK+VTFQKSAGFQALIQYQ +QCA SARTALQGRNIYDGCCQLDIQFSNL+EL
Sbjct: 121 FSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSNLEEL 180

Query: 183 QVNYNNERSRDFTNPNLPSEPKGRPSQPGYGDAGGMYGVQASGARPVALPQMANAAAVAA 242
           QVNYNN+RSRD+TNPNLP+E KGR S P YGD G            VA PQMAN +A+AA
Sbjct: 181 QVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTG------------VAYPQMANTSAIAA 240

Query: 243 AFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ 302
           AFGGGLPPGI+GTNDRCTVLVSNLN D IDEDKLFNLFS+YGNIVRIKLLRNKPDHALVQ
Sbjct: 241 AFGGGLPPGITGTNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQ 300

Query: 303 MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNYR 362
           MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNIT G D+H+Y NSNLNRFNRNAAKNYR
Sbjct: 301 MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNRFNRNAAKNYR 360

Query: 363 YCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATEA 422
           YCCSPTK+IH+S+L Q+VTEEE++N ++EH  +VNTK+FEMNGK+QAL+ F+ EE+A EA
Sbjct: 361 YCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQFENEEEAAEA 420

Query: 423 LVCKHATSLGGSIIRISFSQLQTI 447
           LVCKHATSLGGSIIRISFSQLQTI
Sbjct: 421 LVCKHATSLGGSIIRISFSQLQTI 432

[Close]

BLAST of Carg27846 vs. ExPASy Swiss-Prot
Match: P26599 (Polypyrimidine tract-binding protein 1 OS=Homo sapiens OX=9606 GN=PTBP1 PE=1 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 4.4e-77
Identity = 175/478 (36.61%), Postives = 270/478 (56.49%), Query Frame = 0


Query: 6   PSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQFFAN 65
           PS+VIH+R +  +++E +++ L  PFG +T L+ML+ KNQA I+M    +A + + ++ +
Sbjct: 57  PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTS 116

Query: 66  VQPSIRGRNVYVQFSSHQELTTADQNAQGR------------------------------ 125
           V P +RG+ +Y+QFS+H+EL T     Q R                              
Sbjct: 117 VTPVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMA 176

Query: 126 --GDEPNRILLVTIHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQSRQCA 185
             G  P  +L + + ++ YP+T++VLHQ+F   G V KI+TF K+  FQAL+QY     A
Sbjct: 177 MAGQSP--VLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSA 236

Query: 186 VSARTALQGRNIYDGCCQLDIQFSNLDELQVNYNNERSRDFTNPNLPSEPKGRPSQPGYG 245
             A+ +L G+NIY+ CC L I FS L  L V YNN++SRD+T P+LPS            
Sbjct: 237 QHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMA 296

Query: 246 DAGGMYGVQASGA-RPVALPQMANAAAVAAAFGGGLPPGISGTNDRCTVLVSNLNPDQID 305
            A G+      GA  P+A+P   +AAA AAA G    PG++G  +   +LVSNLNP+++ 
Sbjct: 297 AAFGLSVPNVHGALAPLAIP---SAAAAAAAAGRIAIPGLAGAGN-SVLLVSNLNPERVT 356

Query: 306 EDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSK 365
              LF LF +YG++ R+K+L NK ++ALVQM DG QA+LA+  L G  L GK + +  SK
Sbjct: 357 PQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSK 416

Query: 366 HPNI---TQGAD----THEYANSNLNRFNRNAAKNYRYCCSPTKIIHISSLSQEVTEEEI 425
           H N+    +G +    T +Y NS L+RF +  +KN++    P+  +H+S++   V+EE++
Sbjct: 417 HQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDL 476

Query: 426 VNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATEALVCKHATSLG-GSIIRISFSQ 443
             L   +  +V    F    ++ ALI   + E+A +AL+  H   LG    +R+SFS+
Sbjct: 477 KVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSK 528

[Close]

BLAST of Carg27846 vs. ExPASy Swiss-Prot
Match: Q8WN55 (Polypyrimidine tract-binding protein 1 OS=Bos taurus OX=9913 GN=PTBP1 PE=2 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 4.9e-76
Identity = 173/478 (36.19%), Postives = 270/478 (56.49%), Query Frame = 0


Query: 6   PSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQFFAN 65
           PS+VIH+R +  +++E +++ L  PFG +T L+ML+ KNQA I+M    +A + + ++ +
Sbjct: 57  PSRVIHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMHTEEAANTMVNYYTS 116

Query: 66  VQPSIRGRNVYVQFSSHQELTTADQNAQGR------------------------------ 125
           V P +RG+ +Y+QFS+H+EL T     Q R                              
Sbjct: 117 VTPVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMA 176

Query: 126 --GDEPNRILLVTIHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQSRQCA 185
             G  P  +L + + ++ YP+T++VLHQ+F   G V KI+TF K+  FQAL+QY     A
Sbjct: 177 MAGQSP--VLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSA 236

Query: 186 VSARTALQGRNIYDGCCQLDIQFSNLDELQVNYNNERSRDFTNPNLPSEPKGRPSQPGYG 245
             A+ +L G+NIY+ CC L I FS L  L V YNN++SRD+T P+LPS            
Sbjct: 237 QHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMA 296

Query: 246 DAGGMYGVQASGA-RPVALPQMANAAAVAAAFGGGLPPGISGTNDRCTVLVSNLNPDQID 305
            A G+      GA  P+A+P   +AAA AAA G    PG++G  +   +LVSNLNP+++ 
Sbjct: 297 AAFGLSVPNVHGALAPLAIP---SAAAAAAAAGRIAIPGLAGAGN-SVLLVSNLNPERVT 356

Query: 306 EDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSK 365
              LF LF +YG++ R+K+L NK ++ALVQM DG QA+LA+  L G  L GK + +  SK
Sbjct: 357 PQSLFILFGVYGDVQRVKVLFNKKENALVQMADGSQAQLAMSHLNGHKLHGKPVRITLSK 416

Query: 366 HPNI---TQGAD----THEYANSNLNRFNRNAAKNYRYCCSPTKIIHISSLSQEVTEEEI 425
           H ++    +G +    T +Y NS L+RF +  +KN++    P+  +H+S++   ++E+++
Sbjct: 417 HQSVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEDDL 476

Query: 426 VNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATEALVCKHATSLG-GSIIRISFSQ 443
             L   +  IV    F    ++ ALI   + E+A +AL+  H   LG    +R+SFS+
Sbjct: 477 KILFSSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQALIDLHNHDLGENHHLRVSFSK 528

[Close]

BLAST of Carg27846 vs. ExPASy Swiss-Prot
Match: Q29099 (Polypyrimidine tract-binding protein 1 OS=Sus scrofa OX=9823 GN=PTBP1 PE=2 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.0e-73
Identity = 177/501 (35.33%), Postives = 274/501 (54.69%), Query Frame = 0


Query: 6   PSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQFFAN 65
           PS+VIH+R +  +++E +++ L  PFG +T L+ML+ KNQA I+M    +A + + ++ +
Sbjct: 57  PSRVIHIRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTS 116

Query: 66  VQPSIRGRNVYVQFSSHQELTTADQNAQGR------------------------------ 125
           V P +RG+ +Y+QFS+H+EL T     Q R                              
Sbjct: 117 VTPVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMA 176

Query: 126 --GDEPNRILLVTIHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQSRQCA 185
             G  P  +L + + ++ YP+T++VLHQ+F   G V KI+TF K+  FQAL+QY     A
Sbjct: 177 MAGQSP--VLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSA 236

Query: 186 VSARTALQGRNIYDGCCQLDIQFSNLDELQVNYNNERSRDFTNPNLPS---EPK-GRPSQ 245
             A+ +L G+NIY+ CC L I FS L  L V YNN++SRD+T P+LPS   +P   +   
Sbjct: 237 QHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPSLDQTMA 296

Query: 246 PGYGDAGGMYGVQASGA---RPVALPQMA-----------------NAAAVAAAFGGGLP 305
             +G  G M     +GA      A+PQ A                 +AAA AAA G    
Sbjct: 297 AAFGAPGIMSASPYAGAGFPPTFAIPQAATVSVPNVHGALAPLAIPSAAARAAAAGRIAI 356

Query: 306 PGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQA 365
           PG++G  +   +LVSNLNP+++    LF LF +Y ++ R+K+L NK ++ALVQM DG QA
Sbjct: 357 PGLAGAGN-SVLLVSNLNPERVTPQSLFILFGVYCDVQRVKILFNKKENALVQMADGSQA 416

Query: 366 ELAVHFLKGAMLFGKRLEVNFSKHPNI---TQGAD----THEYANSNLNRFNRNAAKNYR 425
           +LA+  L G  L GK + +  SKH N+    +G +    T +Y NS L+RF +  +KN++
Sbjct: 417 QLAMSHLNGHKLHGKPVRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQ 476

Query: 426 YCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATEA 443
               P+  +H+S++   ++EE++  L   +  IV    F    ++ ALI   + E+A +A
Sbjct: 477 NIFPPSATLHLSNIPPSISEEDLKILFSSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQA 536

[Close]

BLAST of Carg27846 vs. ExPASy Swiss-Prot
Match: Q00438 (Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.0e-73
Identity = 173/500 (34.60%), Postives = 277/500 (55.40%), Query Frame = 0


Query: 6   PSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQFFAN 65
           PS+VIHVR +  +++E +++ L  PFG +T L+ML+ KNQA I+M    +A + + ++ +
Sbjct: 56  PSRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMSTEEAANTMVNYYTS 115

Query: 66  VQPSIRGRNVYVQFSSHQELTTADQNAQGR------------------------------ 125
           V P +RG+ +Y+QFS+H+EL T     Q R                              
Sbjct: 116 VAPVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMA 175

Query: 126 --GDEPNRILLVTIHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQSRQCA 185
             G  P  +L + + ++ YP+T++VLHQ+F   G V KI+TF K+  FQAL+QY     A
Sbjct: 176 MAGQSP--VLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSA 235

Query: 186 VSARTALQGRNIYDGCCQLDIQFSNLDELQVNYNNERSRDFTNPNLP---SEPK-GRPSQ 245
             A+ +L G+NIY+ CC L I FS L  L V YNN++SRD+T P+LP   S+P   +   
Sbjct: 236 QHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMA 295

Query: 246 PGYGDAGGMYGVQASGARP----------VALPQ---------MANAAAVAAAFGGGLPP 305
             +G  G M     +GA P          +++P          + +AAA AAA G    P
Sbjct: 296 AAFGAPGIMSASPYAGAVPSHLCHPSRAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIP 355

Query: 306 GISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAE 365
           G++G  +   +LVSNLNP+++    LF LF +YG++ R+K+L NK ++ALV+M DG QA+
Sbjct: 356 GLAGAGN-SVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVEMADGSQAQ 415

Query: 366 LAVHFLKGAMLFGKRLEVNFSKHPNI---TQGAD----THEYANSNLNRFNRNAAKNYRY 425
           LA+  L G  L GK + +  SKH ++    +G +    T +Y +S L+RF +  +KN++ 
Sbjct: 416 LAMSHLNGHKLHGKSVRITLSKHQSVQLPREGQEDQGLTKDYGSSPLHRFKKPGSKNFQN 475

Query: 426 CCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATEAL 443
              P+  +H+S++   V+E+++ +L   +  +V    F    ++ ALI   + E+A +AL
Sbjct: 476 IFPPSATLHLSNIPPSVSEDDLKSLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQAL 535

[Close]

BLAST of Carg27846 vs. ExPASy TrEMBL
Match: A0A6J1EW29 (polypyrimidine tract-binding protein homolog 3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111438417 PE=4 SV=1)

HSP 1 Score: 874.0 bits (2257), Expect = 2.7e-250
Identity = 442/444 (99.55%), Postives = 443/444 (99.77%), Query Frame = 0


Query: 3   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF 62
           MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF 60

Query: 63  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV 122
           FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV
Sbjct: 61  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV 120

Query: 123 FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL 182
           FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL
Sbjct: 121 FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL 180

Query: 183 QVNYNNERSRDFTNPNLPSEPKGRPSQPGYGDAGGMYGVQASGARPVALPQMANAAAVAA 242
           QVNYNNERSRDFTNPNLPSEPKGR SQPGYGDAGGMYGVQASGARPVALPQMANAAAVAA
Sbjct: 181 QVNYNNERSRDFTNPNLPSEPKGRSSQPGYGDAGGMYGVQASGARPVALPQMANAAAVAA 240

Query: 243 AFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ 302
           AFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ
Sbjct: 241 AFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ 300

Query: 303 MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNYR 362
           MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNYR
Sbjct: 301 MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNYR 360

Query: 363 YCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATEA 422
           YCCSPTKIIHISSLSQEVTEEEIVNLLE+HMPIVNTKLFEMNGKRQALIMFDTEEQATEA
Sbjct: 361 YCCSPTKIIHISSLSQEVTEEEIVNLLEQHMPIVNTKLFEMNGKRQALIMFDTEEQATEA 420

Query: 423 LVCKHATSLGGSIIRISFSQLQTI 447
           LVCKHATSLGGSIIRISFSQLQTI
Sbjct: 421 LVCKHATSLGGSIIRISFSQLQTI 444

[Close]

BLAST of Carg27846 vs. ExPASy TrEMBL
Match: A0A6J1I765 (polypyrimidine tract-binding protein homolog 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471391 PE=4 SV=1)

HSP 1 Score: 870.9 bits (2249), Expect = 2.3e-249
Identity = 441/444 (99.32%), Postives = 442/444 (99.55%), Query Frame = 0


Query: 3   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF 62
           MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAV+ALQF
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVNALQF 60

Query: 63  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV 122
           FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV
Sbjct: 61  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV 120

Query: 123 FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL 182
           FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL
Sbjct: 121 FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL 180

Query: 183 QVNYNNERSRDFTNPNLPSEPKGRPSQPGYGDAGGMYGVQASGARPVALPQMANAAAVAA 242
           QVNYNNERSRDFTNPNLPSEPKGR SQPGYGDAGGMYGVQASGARPVALPQMANAAAVAA
Sbjct: 181 QVNYNNERSRDFTNPNLPSEPKGRSSQPGYGDAGGMYGVQASGARPVALPQMANAAAVAA 240

Query: 243 AFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ 302
           AFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ
Sbjct: 241 AFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ 300

Query: 303 MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNYR 362
           MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADT EYANSNLNRFNRNAAKNYR
Sbjct: 301 MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTREYANSNLNRFNRNAAKNYR 360

Query: 363 YCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATEA 422
           YCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATEA
Sbjct: 361 YCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATEA 420

Query: 423 LVCKHATSLGGSIIRISFSQLQTI 447
           LVCKHATSLGGSIIRISFSQLQTI
Sbjct: 421 LVCKHATSLGGSIIRISFSQLQTI 444

[Close]

BLAST of Carg27846 vs. ExPASy TrEMBL
Match: A0A6J1EVP5 (polypyrimidine tract-binding protein homolog 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438417 PE=4 SV=1)

HSP 1 Score: 869.4 bits (2245), Expect = 6.5e-249
Identity = 442/445 (99.33%), Postives = 443/445 (99.55%), Query Frame = 0


Query: 3   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF 62
           MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF 60

Query: 63  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDE-PNRILLVTIHHMLYPITVEVLHQ 122
           FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDE PNRILLVTIHHMLYPITVEVLHQ
Sbjct: 61  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEQPNRILLVTIHHMLYPITVEVLHQ 120

Query: 123 VFFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDE 182
           VFFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDE
Sbjct: 121 VFFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDE 180

Query: 183 LQVNYNNERSRDFTNPNLPSEPKGRPSQPGYGDAGGMYGVQASGARPVALPQMANAAAVA 242
           LQVNYNNERSRDFTNPNLPSEPKGR SQPGYGDAGGMYGVQASGARPVALPQMANAAAVA
Sbjct: 181 LQVNYNNERSRDFTNPNLPSEPKGRSSQPGYGDAGGMYGVQASGARPVALPQMANAAAVA 240

Query: 243 AAFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALV 302
           AAFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALV
Sbjct: 241 AAFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALV 300

Query: 303 QMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNY 362
           QMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNY
Sbjct: 301 QMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNY 360

Query: 363 RYCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATE 422
           RYCCSPTKIIHISSLSQEVTEEEIVNLLE+HMPIVNTKLFEMNGKRQALIMFDTEEQATE
Sbjct: 361 RYCCSPTKIIHISSLSQEVTEEEIVNLLEQHMPIVNTKLFEMNGKRQALIMFDTEEQATE 420

Query: 423 ALVCKHATSLGGSIIRISFSQLQTI 447
           ALVCKHATSLGGSIIRISFSQLQTI
Sbjct: 421 ALVCKHATSLGGSIIRISFSQLQTI 445

[Close]

BLAST of Carg27846 vs. ExPASy TrEMBL
Match: A0A6J1I9W1 (polypyrimidine tract-binding protein homolog 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471391 PE=4 SV=1)

HSP 1 Score: 866.3 bits (2237), Expect = 5.5e-248
Identity = 441/445 (99.10%), Postives = 442/445 (99.33%), Query Frame = 0


Query: 3   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF 62
           MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAV+ALQF
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVNALQF 60

Query: 63  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDE-PNRILLVTIHHMLYPITVEVLHQ 122
           FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDE PNRILLVTIHHMLYPITVEVLHQ
Sbjct: 61  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEQPNRILLVTIHHMLYPITVEVLHQ 120

Query: 123 VFFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDE 182
           VFFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDE
Sbjct: 121 VFFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDE 180

Query: 183 LQVNYNNERSRDFTNPNLPSEPKGRPSQPGYGDAGGMYGVQASGARPVALPQMANAAAVA 242
           LQVNYNNERSRDFTNPNLPSEPKGR SQPGYGDAGGMYGVQASGARPVALPQMANAAAVA
Sbjct: 181 LQVNYNNERSRDFTNPNLPSEPKGRSSQPGYGDAGGMYGVQASGARPVALPQMANAAAVA 240

Query: 243 AAFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALV 302
           AAFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALV
Sbjct: 241 AAFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALV 300

Query: 303 QMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNY 362
           QMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADT EYANSNLNRFNRNAAKNY
Sbjct: 301 QMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTREYANSNLNRFNRNAAKNY 360

Query: 363 RYCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATE 422
           RYCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATE
Sbjct: 361 RYCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATE 420

Query: 423 ALVCKHATSLGGSIIRISFSQLQTI 447
           ALVCKHATSLGGSIIRISFSQLQTI
Sbjct: 421 ALVCKHATSLGGSIIRISFSQLQTI 445

[Close]

BLAST of Carg27846 vs. ExPASy TrEMBL
Match: A0A6J1DFL0 (polypyrimidine tract-binding protein homolog 3 OS=Momordica charantia OX=3673 GN=LOC111019646 PE=4 SV=1)

HSP 1 Score: 850.9 bits (2197), Expect = 2.4e-243
Identity = 427/444 (96.17%), Postives = 438/444 (98.65%), Query Frame = 0


Query: 3   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF 62
           MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAV+ALQF
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVNALQF 60

Query: 63  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV 122
           FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV
Sbjct: 61  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV 120

Query: 123 FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL 182
           FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL
Sbjct: 121 FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL 180

Query: 183 QVNYNNERSRDFTNPNLPSEPKGRPSQPGYGDAGGMYGVQASGARPVALPQMANAAAVAA 242
           QVNYNNERSRDFTNP+LPSEPKGR SQPGYGDAGGMY +QASGARPVA PQMANAAAVAA
Sbjct: 181 QVNYNNERSRDFTNPSLPSEPKGRSSQPGYGDAGGMYALQASGARPVAFPQMANAAAVAA 240

Query: 243 AFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ 302
           AFGGGLPPG+SGTNDRCTVLVSNL+PD+IDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ
Sbjct: 241 AFGGGLPPGVSGTNDRCTVLVSNLDPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ 300

Query: 303 MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNYR 362
           MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNYR
Sbjct: 301 MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNYR 360

Query: 363 YCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATEA 422
           YCCSPTK+IHISSLSQEVTEEEI  +LEEH PIVNTKLFEMNGK+QAL+MFDTEEQATEA
Sbjct: 361 YCCSPTKMIHISSLSQEVTEEEIATVLEEHGPIVNTKLFEMNGKKQALVMFDTEEQATEA 420

Query: 423 LVCKHATSLGGSIIRISFSQLQTI 447
           LVCKHA+SLGGSIIRISFSQLQTI
Sbjct: 421 LVCKHASSLGGSIIRISFSQLQTI 444

[Close]

BLAST of Carg27846 vs. TAIR 10
Match: AT1G43190.1 (polypyrimidine tract-binding protein 3 )

HSP 1 Score: 742.7 bits (1916), Expect = 1.8e-214
Identity = 370/444 (83.33%), Postives = 402/444 (90.54%), Query Frame = 0


Query: 3   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF 62
           M E SKV+HVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQAL+QMQDV SAVSALQF
Sbjct: 1   MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQF 60

Query: 63  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV 122
           F NVQP+IRGRNVYVQFSSHQELTT +QN  GR DEPNRILLVTIHHMLYPITV+VLHQV
Sbjct: 61  FTNVQPTIRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHMLYPITVDVLHQV 120

Query: 123 FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL 182
           F P+GFVEK+VTFQKSAGFQALIQYQ +QCA SARTALQGRNIYDGCCQLDIQFSNL+EL
Sbjct: 121 FSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSNLEEL 180

Query: 183 QVNYNNERSRDFTNPNLPSEPKGRPSQPGYGDAGGMYGVQASGARPVALPQMANAAAVAA 242
           QVNYNN+RSRD+TNPNLP+E KGR S P YGD G            VA PQMAN +A+AA
Sbjct: 181 QVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTG------------VAYPQMANTSAIAA 240

Query: 243 AFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ 302
           AFGGGLPPGI+GTNDRCTVLVSNLN D IDEDKLFNLFS+YGNIVRIKLLRNKPDHALVQ
Sbjct: 241 AFGGGLPPGITGTNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQ 300

Query: 303 MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNYR 362
           MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNIT G D+H+Y NSNLNRFNRNAAKNYR
Sbjct: 301 MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNRFNRNAAKNYR 360

Query: 363 YCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATEA 422
           YCCSPTK+IH+S+L Q+VTEEE++N ++EH  +VNTK+FEMNGK+QAL+ F+ EE+A EA
Sbjct: 361 YCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQFENEEEAAEA 420

Query: 423 LVCKHATSLGGSIIRISFSQLQTI 447
           LVCKHATSLGGSIIRISFSQLQTI
Sbjct: 421 LVCKHATSLGGSIIRISFSQLQTI 432

[Close]

BLAST of Carg27846 vs. TAIR 10
Match: AT1G43190.2 (polypyrimidine tract-binding protein 3 )

HSP 1 Score: 742.7 bits (1916), Expect = 1.8e-214
Identity = 370/444 (83.33%), Postives = 402/444 (90.54%), Query Frame = 0


Query: 3   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF 62
           M E SKV+HVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQAL+QMQDV SAVSALQF
Sbjct: 1   MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQF 60

Query: 63  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV 122
           F NVQP+IRGRNVYVQFSSHQELTT +QN  GR DEPNRILLVTIHHMLYPITV+VLHQV
Sbjct: 61  FTNVQPTIRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHMLYPITVDVLHQV 120

Query: 123 FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL 182
           F P+GFVEK+VTFQKSAGFQALIQYQ +QCA SARTALQGRNIYDGCCQLDIQFSNL+EL
Sbjct: 121 FSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSNLEEL 180

Query: 183 QVNYNNERSRDFTNPNLPSEPKGRPSQPGYGDAGGMYGVQASGARPVALPQMANAAAVAA 242
           QVNYNN+RSRD+TNPNLP+E KGR S P YGD G            VA PQMAN +A+AA
Sbjct: 181 QVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTG------------VAYPQMANTSAIAA 240

Query: 243 AFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ 302
           AFGGGLPPGI+GTNDRCTVLVSNLN D IDEDKLFNLFS+YGNIVRIKLLRNKPDHALVQ
Sbjct: 241 AFGGGLPPGITGTNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQ 300

Query: 303 MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNYR 362
           MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNIT G D+H+Y NSNLNRFNRNAAKNYR
Sbjct: 301 MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNRFNRNAAKNYR 360

Query: 363 YCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATEA 422
           YCCSPTK+IH+S+L Q+VTEEE++N ++EH  +VNTK+FEMNGK+QAL+ F+ EE+A EA
Sbjct: 361 YCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQFENEEEAAEA 420

Query: 423 LVCKHATSLGGSIIRISFSQLQTI 447
           LVCKHATSLGGSIIRISFSQLQTI
Sbjct: 421 LVCKHATSLGGSIIRISFSQLQTI 432

[Close]

BLAST of Carg27846 vs. TAIR 10
Match: AT1G43190.3 (polypyrimidine tract-binding protein 3 )

HSP 1 Score: 733.4 bits (1892), Expect = 1.1e-211
Identity = 368/444 (82.88%), Postives = 400/444 (90.09%), Query Frame = 0


Query: 3   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALQF 62
           M E SKV+HVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQAL+QMQDV SAVSALQF
Sbjct: 1   MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQF 60

Query: 63  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV 122
           F NVQP+I  RNVYVQFSSHQELTT +QN  GR DEPNRILLVTIHHMLYPITV+VLHQV
Sbjct: 61  FTNVQPTI--RNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHMLYPITVDVLHQV 120

Query: 123 FFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNIYDGCCQLDIQFSNLDEL 182
           F P+GFVEK+VTFQKSAGFQALIQYQ +QCA SARTALQGRNIYDGCCQLDIQFSNL+EL
Sbjct: 121 FSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSNLEEL 180

Query: 183 QVNYNNERSRDFTNPNLPSEPKGRPSQPGYGDAGGMYGVQASGARPVALPQMANAAAVAA 242
           QVNYNN+RSRD+TNPNLP+E KGR S P YGD G            VA PQMAN +A+AA
Sbjct: 181 QVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTG------------VAYPQMANTSAIAA 240

Query: 243 AFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ 302
           AFGGGLPPGI+GTNDRCTVLVSNLN D IDEDKLFNLFS+YGNIVRIKLLRNKPDHALVQ
Sbjct: 241 AFGGGLPPGITGTNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQ 300

Query: 303 MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRFNRNAAKNYR 362
           MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNIT G D+H+Y NSNLNRFNRNAAKNYR
Sbjct: 301 MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNRFNRNAAKNYR 360

Query: 363 YCCSPTKIIHISSLSQEVTEEEIVNLLEEHMPIVNTKLFEMNGKRQALIMFDTEEQATEA 422
           YCCSPTK+IH+S+L Q+VTEEE++N ++EH  +VNTK+FEMNGK+QAL+ F+ EE+A EA
Sbjct: 361 YCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQFENEEEAAEA 420

Query: 423 LVCKHATSLGGSIIRISFSQLQTI 447
           LVCKHATSLGGSIIRISFSQLQTI
Sbjct: 421 LVCKHATSLGGSIIRISFSQLQTI 430

[Close]

BLAST of Carg27846 vs. TAIR 10
Match: AT3G01150.1 (polypyrimidine tract-binding protein 1 )

HSP 1 Score: 149.8 bits (377), Expect = 5.1e-36
Identity = 109/353 (30.88%), Postives = 181/353 (51.27%), Query Frame = 0


Query: 1   FRMTE-PSKVIHVRNVGHEISENDLLQLFQPFGVI--TKLVMLRAKNQALIQMQDVPSAV 60
           FR T+ PSKV+H+RN+  E  E +L+ L + FG I  TK  +   +NQA ++  D+  A+
Sbjct: 9   FRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEFADLNQAI 68

Query: 61  SALQFFANVQ--PSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHM-LYPI 120
           S + ++A+      IRG+ VY+Q+S+  E+     N Q  GD P  +LLVT   +  + +
Sbjct: 69  SMVSYYASSSEPAQIRGKTVYIQYSNRHEIV----NNQSPGDVPGNVLLVTFEGVESHEV 128

Query: 121 TVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNI-------YD 180
           +++V+H VF   GFV KI TF+K+AGFQAL+Q+   + A +AR+AL GR+I       + 
Sbjct: 129 SIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLSAHV 188

Query: 181 GCCQLDIQFSNLDELQVNYNNERSRDFTNPNLPSEPKGRPSQPGYGDAGGMYGVQASGAR 240
           G C L + +S   +L + + + RSRD+TNP LP                           
Sbjct: 189 GSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLP--------------------------- 248

Query: 241 PVALPQMANAAAVAAAFGGGLPPGISGTNDRCTVLVSNLNPDQIDEDKLFNLFSIYGNIV 300
              + Q A   ++  A G      +   ++    L+ N+    +  D L  +FS YG + 
Sbjct: 249 ---VNQTAMDGSMQPALGAD-GKKVESQSNVLLGLIENMQ-YAVTVDVLHTVFSAYGTVQ 308

Query: 301 RIKLL-RNKPDHALVQMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNI 337
           +I +  +N    AL+Q  D   A +A   L+G  ++     +L +++S+H ++
Sbjct: 309 KIAIFEKNGSTQALIQYSDIPTAAMAKEALEGHCIYDGGYCKLRLSYSRHTDL 325

[Close]

BLAST of Carg27846 vs. TAIR 10
Match: AT5G53180.1 (polypyrimidine tract-binding protein 2 )

HSP 1 Score: 146.7 bits (369), Expect = 4.3e-35
Identity = 108/356 (30.34%), Postives = 180/356 (50.56%), Query Frame = 0


Query: 1   FRMTE-PSKVIHVRNVGHEISENDLLQLFQPFGVI--TKLVMLRAKNQALIQMQDVPSAV 60
           FR T+ PSKV+H+RN+  E +E +L++L +PFG +  TK  +   +NQA I+ +D+  A+
Sbjct: 10  FRYTQPPSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFIEFEDLNQAI 69

Query: 61  SALQFFANVQ--PSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIH-HMLYPI 120
             + ++A+      +RG+ VY+Q+S+ QE+     N +   D    +LLVTI       +
Sbjct: 70  QMISYYASSSEPAQVRGKTVYLQYSNRQEIV----NNKTTADVVGNVLLVTIEGDDARMV 129

Query: 121 TVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQSRQCAVSARTALQGRNI-------YD 180
           +++VLH VF   GFV KI TF+K+AG+QAL+Q+   + A +A+ AL GR+I         
Sbjct: 130 SIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYLLAETV 189

Query: 181 GCCQLDIQFSNLDELQVNYNNERSRDFTNPNLPSEPKGRPSQPGYGDAGGMYGVQASGAR 240
           G C L I +S   +L V + + RSRD+TNP LP  P          D+ G   V   G +
Sbjct: 190 GQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAI-------DSTGQVAVGVDGKK 249

Query: 241 PVALPQMANAAAVAAAFGGGLPPGISGTNDRCTVLVSNLNPDQ--IDEDKLFNLFSIYGN 300
                                            VL++++   Q  +  D L  +F+ +G 
Sbjct: 250 ---------------------------MEPESNVLLASIENMQYAVTLDVLHMVFAAFGE 309

Query: 301 IVRIKLL-RNKPDHALVQMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNIT 338
           + +I +  +N    AL+Q  D   A +A   L+G  ++     +L + +S+H +++
Sbjct: 310 VQKIAMFDKNGGVQALIQYSDVQTAVVAKEALEGHCIYDGGFCKLHITYSRHTDLS 327

The following BLAST results are available for this feature:

BLAST of Carg27846 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037205.1	1.5e-252	100.00	Polypyrimidine tract-binding protein-like 3, partial [Cucurbita argyrosperma sub...	[more]
XP_023525438.1	2.5e-250	99.77	polypyrimidine tract-binding protein homolog 3 isoform X2 [Cucurbita pepo subsp....	[more]
XP_022932099.1	5.5e-250	99.55	polypyrimidine tract-binding protein homolog 3 isoform X2 [Cucurbita moschata] >...	[more]
XP_022972881.1	4.6e-249	99.32	polypyrimidine tract-binding protein homolog 3 isoform X2 [Cucurbita maxima]	[more]
XP_023525437.1	6.1e-249	99.55	polypyrimidine tract-binding protein homolog 3 isoform X1 [Cucurbita pepo subsp....	[more]

BLAST of Carg27846 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6ICX4	2.5e-213	83.33	Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana OX=3702 G...	[more]
P26599	4.4e-77	36.61	Polypyrimidine tract-binding protein 1 OS=Homo sapiens OX=9606 GN=PTBP1 PE=1 SV=...	[more]
Q8WN55	4.9e-76	36.19	Polypyrimidine tract-binding protein 1 OS=Bos taurus OX=9913 GN=PTBP1 PE=2 SV=1	[more]
Q29099	1.0e-73	35.33	Polypyrimidine tract-binding protein 1 OS=Sus scrofa OX=9823 GN=PTBP1 PE=2 SV=1	[more]
Q00438	1.0e-73	34.60	Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE...	[more]

BLAST of Carg27846 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EW29	2.7e-250	99.55	polypyrimidine tract-binding protein homolog 3 isoform X2 OS=Cucurbita moschata ...	[more]
A0A6J1I765	2.3e-249	99.32	polypyrimidine tract-binding protein homolog 3 isoform X2 OS=Cucurbita maxima OX...	[more]
A0A6J1EVP5	6.5e-249	99.33	polypyrimidine tract-binding protein homolog 3 isoform X1 OS=Cucurbita moschata ...	[more]
A0A6J1I9W1	5.5e-248	99.10	polypyrimidine tract-binding protein homolog 3 isoform X1 OS=Cucurbita maxima OX...	[more]
A0A6J1DFL0	2.4e-243	96.17	polypyrimidine tract-binding protein homolog 3 OS=Momordica charantia OX=3673 GN...	[more]

BLAST of Carg27846 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43190.1	1.8e-214	83.33	polypyrimidine tract-binding protein 3	[more]
AT1G43190.2	1.8e-214	83.33	polypyrimidine tract-binding protein 3	[more]
AT1G43190.3	1.1e-211	82.88	polypyrimidine tract-binding protein 3	[more]
AT3G01150.1	5.1e-36	30.88	polypyrimidine tract-binding protein 1	[more]
AT5G53180.1	4.3e-35	30.34	polypyrimidine tract-binding protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 260..329 e-value: 4.1E-13 score: 59.6 coord: 104..173 e-value: 0.88 score: 7.0 coord: 370..439 e-value: 3.7E-7 score: 39.8 coord: 9..78 e-value: 2.2E-8 score: 43.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 11..61 e-value: 2.7E-6 score: 27.1 coord: 373..436 e-value: 5.1E-6 score: 26.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 259..333 score: 13.123163
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 8..82 score: 11.332346
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 369..443 score: 10.274912
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 354..446 e-value: 1.3E-13 score: 52.9 coord: 2..99 e-value: 4.3E-26 score: 93.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 256..353 e-value: 2.9E-26 score: 93.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 100..203 e-value: 4.9E-36 score: 125.0
None	No IPR available	PFAM	PF13893	RRM_5	coord: 243..345 e-value: 3.4E-32 score: 110.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..217
None	No IPR available	PANTHER	PTHR15592	MATRIN 3/NUCLEAR PROTEIN 220-RELATED	coord: 3..445
None	No IPR available	PANTHER	PTHR15592:SF35	POLYPYRIMIDINE TRACT-BINDING PROTEIN HOMOLOG 3	coord: 3..445
None	No IPR available	CDD	cd12426	RRM4_PTBPH3	coord: 362..440 e-value: 1.11186E-42 score: 143.398
IPR006536	HnRNP-L/PTB	TIGRFAM	TIGR01649	TIGR01649	coord: 6..442 e-value: 1.4E-115 score: 385.1
IPR021790	PTBP1, RNA recognition motif 2-like	PFAM	PF11835	RRM_8	coord: 98..177 e-value: 6.1E-21 score: 74.4
IPR034795	PTBPH3, RNA recognition motif 1	CDD	cd12687	RRM1_PTBPH3	coord: 8..82 e-value: 6.71015E-46 score: 151.635
IPR034796	PTBPH3, RNA recognition motif 2	CDD	cd12692	RRM2_PTBPH3	coord: 99..186 e-value: 1.05114E-57 score: 182.83
IPR034797	PTBPH3, RNA recognition motif 3	CDD	cd12698	RRM3_PTBPH3	coord: 258..333 e-value: 1.41001E-49 score: 161.216
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 257..441
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 99..200
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 4..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27846-RA	Carg27846-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding