Carg27751 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27751
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ankyrin repeat-containing protein ITN1-like
Location	Carg_Chr18: 4302037 .. 4302443 (-)
RNA-Seq Expression	Carg27751
Synteny	Carg27751

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGACCCAAAGAAGATATGGATCTGTCCAAGCAGAACAAAGAGTGCTACATTTTAGCGATGAGGGGAGAATGGGATAATCTGGGCAAGGTATGTAAGGAAGCGTGGAAGCTGGTGCTTCCGATCACTGGCAGTGGAGACACGTCGTTGCATTTGGCAGTGCACAGTGGAAAAGAAGAACCTTTAAAAACCTTTCTTGCGCAGGTGATGGAGATTGAGTACACATTGTATTGGAAGAGCTTCGCTGAAAACACACCTCTACATGAAGCTGCCACTGTCGGGAATTTGGGTGCTGTTAAGCTCTTGGTTGAGTTAAGGAAGGAGGATTTGTTGGAGATGAACATTAGGGGTGAAACGCCTTTGTATAGGGCAGCCAGATATGGGAAACTCGAGATCGTTGAACAATGA

mRNA sequence

TAAGACCCAAAGAAGATATGGATCTGTCCAAGCAGAACAAAGAGTGCTACATTTTAGCGATGAGGGGAGAATGGGATAATCTGGGCAAGGTATGTAAGGAAGCGTGGAAGCTGGTGCTTCCGATCACTGGCAGTGGAGACACGTCGTTGCATTTGGCAGTGCACAGTGGAAAAGAAGAACCTTTAAAAACCTTTCTTGCGCAGGTGATGGAGATTGAGTACACATTGTATTGGAAGAGCTTCGCTGAAAACACACCTCTACATGAAGCTGCCACTGTCGGGAATTTGGGTGCTGTTAAGCTCTTGGTTGAGTTAAGGAAGGAGGATTTGTTGGAGATGAACATTAGGGGTGAAACGCCTTTGTATAGGGCAGCCAGATATGGGAAACTCGAGATCGTTGAACAATGA

Coding sequence (CDS)

ATGGATCTGTCCAAGCAGAACAAAGAGTGCTACATTTTAGCGATGAGGGGAGAATGGGATAATCTGGGCAAGGTATGTAAGGAAGCGTGGAAGCTGGTGCTTCCGATCACTGGCAGTGGAGACACGTCGTTGCATTTGGCAGTGCACAGTGGAAAAGAAGAACCTTTAAAAACCTTTCTTGCGCAGGTGATGGAGATTGAGTACACATTGTATTGGAAGAGCTTCGCTGAAAACACACCTCTACATGAAGCTGCCACTGTCGGGAATTTGGGTGCTGTTAAGCTCTTGGTTGAGTTAAGGAAGGAGGATTTGTTGGAGATGAACATTAGGGGTGAAACGCCTTTGTATAGGGCAGCCAGATATGGGAAACTCGAGATCGTTGAACAATGA

Protein sequence

MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFLAQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAARYGKLEIVEQ

Homology

[Close]

BLAST of Carg27751 vs. NCBI nr
Match: KAG7012621.1 (hypothetical protein SDJN02_25373 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 267.3 bits (682), Expect = 6.8e-68
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL 60
           MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL
Sbjct: 1   MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL 60

Query: 61  AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR 120
           AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR
Sbjct: 61  AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR 120

Query: 121 YGKLEIVEQ 130
           YGKLEIVEQ
Sbjct: 121 YGKLEIVEQ 129

[Close]

BLAST of Carg27751 vs. NCBI nr
Match: XP_022954461.1 (ankyrin repeat-containing protein ITN1-like [Cucurbita moschata])

HSP 1 Score: 265.4 bits (677), Expect = 2.6e-67
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL 60
           MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL
Sbjct: 1   MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL 60

Query: 61  AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR 120
           AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR
Sbjct: 61  AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR 120

Query: 121 YGKLEIVE 129
           YGKLEIVE
Sbjct: 121 YGKLEIVE 128

[Close]

BLAST of Carg27751 vs. NCBI nr
Match: KAG6573481.1 (Ankyrin repeat-containing protein NPR4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265.4 bits (677), Expect = 2.6e-67
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL 60
           MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL
Sbjct: 1   MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL 60

Query: 61  AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR 120
           AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR
Sbjct: 61  AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR 120

Query: 121 YGKLEIVE 129
           YGKLEIVE
Sbjct: 121 YGKLEIVE 128

[Close]

BLAST of Carg27751 vs. NCBI nr
Match: XP_022954412.1 (espin-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 265.4 bits (677), Expect = 2.6e-67
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL 60
           MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL
Sbjct: 1   MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL 60

Query: 61  AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR 120
           AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR
Sbjct: 61  AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR 120

Query: 121 YGKLEIVE 129
           YGKLEIVE
Sbjct: 121 YGKLEIVE 128

[Close]

BLAST of Carg27751 vs. NCBI nr
Match: XP_022954413.1 (espin-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 265.4 bits (677), Expect = 2.6e-67
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL 60
           MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL
Sbjct: 1   MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL 60

Query: 61  AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR 120
           AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR
Sbjct: 61  AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR 120

Query: 121 YGKLEIVE 129
           YGKLEIVE
Sbjct: 121 YGKLEIVE 128

[Close]

BLAST of Carg27751 vs. ExPASy Swiss-Prot
Match: P16157 (Ankyrin-1 OS=Homo sapiens OX=9606 GN=ANK1 PE=1 SV=3)

HSP 1 Score: 48.5 bits (114), Expect = 6.5e-05
Identity = 32/87 (36.78%), Postives = 44/87 (50.57%), Query Frame = 0


Query: 41  DTSLHLAVHSGKEEPLKTFLAQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELR 100
           +T LH+A  +G  E  K  L    ++      K+  + TPLH AA +G+   VKLL+E  
Sbjct: 438 ETPLHMAARAGHTEVAKYLLQNKAKVNA----KAKDDQTPLHCAARIGHTNMVKLLLENN 497

Query: 101 KEDLLEMNIRGETPLYRAARYGKLEIV 128
               L     G TPL+ AAR G +E V
Sbjct: 498 ANPNL-ATTAGHTPLHIAAREGHVETV 519

[Close]

BLAST of Carg27751 vs. ExPASy Swiss-Prot
Match: Q02357 (Ankyrin-1 OS=Mus musculus OX=10090 GN=Ank1 PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 1.9e-04
Identity = 31/85 (36.47%), Postives = 43/85 (50.59%), Query Frame = 0


Query: 41  DTSLHLAVHSGKEEPLKTFLAQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELR 100
           +T LH+A  +G  E  K  L    +       K+  + TPLH AA +G+ G VKLL+E  
Sbjct: 434 ETPLHMAARAGHTEVAKYLLQNKAKANA----KAKDDQTPLHCAARIGHTGMVKLLLENG 493

Query: 101 KEDLLEMNIRGETPLYRAARYGKLE 126
               L     G TPL+ AAR G ++
Sbjct: 494 ASPNL-ATTAGHTPLHTAAREGHVD 513

[Close]

BLAST of Carg27751 vs. ExPASy Swiss-Prot
Match: Q9J4Z4 (Putative ankyrin repeat protein FPV246 OS=Fowlpox virus (strain NVSL) OX=928301 GN=FPV246 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.5e-04
Identity = 31/88 (35.23%), Postives = 44/88 (50.00%), Query Frame = 0


Query: 40  GDTSLHLAVHSGKEEPLKTFLAQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVEL 99
           G+T LH A  SG  E +   ++    ++     K    +TPL  A   GN    KLL+E 
Sbjct: 289 GETPLHAATRSGSVETVNALISYGSTVDI----KDNIGSTPLMHAC--GNKDISKLLIE- 348

Query: 100 RKEDLLEMNIRGETPLYRAARYGKLEIV 128
           +  D    NI G TPL+ AA YG +++V
Sbjct: 349 KGADPNISNIHGYTPLHNAAAYGSVDVV 369

[Close]

BLAST of Carg27751 vs. ExPASy Swiss-Prot
Match: P40480 (Protein HOS4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HOS4 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.2e-04
Identity = 30/90 (33.33%), Postives = 50/90 (55.56%), Query Frame = 0


Query: 40  GDTSLHLAVHSGKEEPLKTFLAQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVEL 99
           G T L +A   GK + +K     + E  Y +  +  A NT LHEAA  G++  V+LL+E 
Sbjct: 330 GRTRLQIACDKGKYDVVK---KMIEEGGYDINDQDNAGNTALHEAALQGHIEIVELLIEN 389

Query: 100 RKE-DLLEMNIRGETPLYRAARYGKLEIVE 129
             + ++  + + G+TPL  A+  G L++V+
Sbjct: 390 GADVNIKSIEMFGDTPLIDASANGHLDVVK 416

[Close]

BLAST of Carg27751 vs. ExPASy Swiss-Prot
Match: Q8BTI7 (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C OS=Mus musculus OX=10090 GN=Ankrd52 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 4.2e-04
Identity = 33/90 (36.67%), Postives = 48/90 (53.33%), Query Frame = 0


Query: 39  SGDTSLHLAVHSGKEEPLKTFLAQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVE 98
           SG ++LH AVHSG  E +   L +   +          E  PLH AA +G+L  +KLLV 
Sbjct: 139 SGRSALHHAVHSGHLETVNLLLNKGASLNVC----DKKERQPLHWAAFLGHLEVLKLLV- 198

Query: 99  LRKEDLLEMNIRGETPLYRAARYGKLEIVE 129
            R  DL   + +G   L+ AA  G++E+V+
Sbjct: 199 ARGADLSCKDRKGYGLLHTAAASGQIEVVK 223

[Close]

BLAST of Carg27751 vs. ExPASy TrEMBL
Match: A0A6J1GQZ1 (ankyrin repeat-containing protein ITN1-like OS=Cucurbita moschata OX=3662 GN=LOC111456726 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL 60
           MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL
Sbjct: 1   MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL 60

Query: 61  AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR 120
           AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR
Sbjct: 61  AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR 120

Query: 121 YGKLEIVE 129
           YGKLEIVE
Sbjct: 121 YGKLEIVE 128

[Close]

BLAST of Carg27751 vs. ExPASy TrEMBL
Match: A0A6J1GR15 (espin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456673 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL 60
           MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL
Sbjct: 1   MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL 60

Query: 61  AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR 120
           AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR
Sbjct: 61  AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR 120

Query: 121 YGKLEIVE 129
           YGKLEIVE
Sbjct: 121 YGKLEIVE 128

[Close]

BLAST of Carg27751 vs. ExPASy TrEMBL
Match: A0A6J1GQX5 (espin-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456673 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL 60
           MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL
Sbjct: 1   MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL 60

Query: 61  AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR 120
           AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR
Sbjct: 61  AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR 120

Query: 121 YGKLEIVE 129
           YGKLEIVE
Sbjct: 121 YGKLEIVE 128

[Close]

BLAST of Carg27751 vs. ExPASy TrEMBL
Match: A0A6J1K0P4 (espin-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490547 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 7.6e-49
Identity = 96/128 (75.00%), Postives = 112/128 (87.50%), Query Frame = 0


Query: 1   MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL 60
           MDL K+ K  Y  A+R +W+ +G+VCK+A + VLPI   GDT+LHLAVHSGKEEPLKTFL
Sbjct: 1   MDLYKEKKALYKFALREQWEYVGEVCKDARQFVLPINNGGDTALHLAVHSGKEEPLKTFL 60

Query: 61  AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR 120
           AQVME+EYT +WKS+ ENTPLHEAA+VGNLGAVKLLVELRKEDLLE+NI GETPLYRAAR
Sbjct: 61  AQVMEMEYTEHWKSYVENTPLHEAASVGNLGAVKLLVELRKEDLLEVNIWGETPLYRAAR 120

Query: 121 YGKLEIVE 129
           YGKL+IV+
Sbjct: 121 YGKLDIVQ 128

[Close]

BLAST of Carg27751 vs. ExPASy TrEMBL
Match: A0A6J1JXD5 (uncharacterized protein LOC111490543 OS=Cucurbita maxima OX=3661 GN=LOC111490543 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.8e-48
Identity = 95/128 (74.22%), Postives = 111/128 (86.72%), Query Frame = 0


Query: 1   MDLSKQNKECYILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFL 60
           MDL K+ K  Y  A+R +W+ +G+VCK+A + VLPI   GDT+LHLAVHSGKEEPLKTFL
Sbjct: 1   MDLYKEKKALYKFALREQWEYVGEVCKDARQFVLPINNGGDTALHLAVHSGKEEPLKTFL 60

Query: 61  AQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAAR 120
           AQVME+EYT +WKS+ ENTPLHEAA+VGNLGAVKLLVELRKEDLLE+NI GETPLY AAR
Sbjct: 61  AQVMEMEYTEHWKSYVENTPLHEAASVGNLGAVKLLVELRKEDLLEVNIWGETPLYSAAR 120

Query: 121 YGKLEIVE 129
           YGKL+IV+
Sbjct: 121 YGKLDIVQ 128

[Close]

BLAST of Carg27751 vs. TAIR 10
Match: AT3G54070.1 (Ankyrin repeat family protein )

HSP 1 Score: 52.0 bits (123), Expect = 4.2e-07
Identity = 31/119 (26.05%), Postives = 65/119 (54.62%), Query Frame = 0


Query: 11  YILAMRGEWDNLGK-VCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFLAQVMEIEYT 70
           Y   + G+W      + ++   +V  ITG+ + +LH+AV +  ++ ++  L ++   + +
Sbjct: 55  YKAVLTGDWKTASTLISRKECNVVEQITGNSEIALHIAVAAKHKDFVRNLLREMDPPDLS 114

Query: 71  LYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGETPLYRAARYGKLEIVE 129
           L  K+   NTPL  AA +G++   ++L+ + ++     N +  TP++ AA YG  E+V+
Sbjct: 115 L--KNKDGNTPLSFAAALGDIETAEMLINMIRDLPDISNEKTMTPIHIAALYGHGEMVQ 171

[Close]

BLAST of Carg27751 vs. TAIR 10
Match: AT1G14500.1 (Ankyrin repeat family protein )

HSP 1 Score: 47.0 bits (110), Expect = 1.3e-05
Identity = 33/112 (29.46%), Postives = 55/112 (49.11%), Query Frame = 0


Query: 11  YILAMRGEWDNLGKVCKEAWKLVLPITGSGDTSLHLAVHSGKEEPLKTFLAQVMEIEYT- 70
           ++LA+RG+ + + +  K     +  ++ +G  +LHLAV + + E L+     +  +    
Sbjct: 110 HLLAIRGDVNLVAECLKYCPVCIQDVSVNGHNALHLAVMNDRFEILQVLTGWLQRMSQKD 169

Query: 71  --------LYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEMNIRGET 114
                   L  K  A NTPLH AA   +  AVKLL++ +   L E+N  G T
Sbjct: 170 SASTESDFLNRKDLAHNTPLHLAAYKEDHQAVKLLLQCQLVKLNEVNADGLT 221

[Close]

BLAST of Carg27751 vs. TAIR 10
Match: AT5G60070.1 (ankyrin repeat family protein )

HSP 1 Score: 44.7 bits (104), Expect = 6.7e-05
Identity = 36/135 (26.67%), Postives = 64/135 (47.41%), Query Frame = 0


Query: 2   DLSKQNKEC-----YILAMRGEWDNLGKVCKEAWKLVLPIT--GSGDTSLHLAVHSGKEE 61
           DL ++  +C     Y+ A  G+ D + ++ K  + L    T   +G    H+A   G+ +
Sbjct: 64  DLLRKQNQCGETALYVAAEYGDADVVAELIK-YYDLEDAETKARNGFDPFHIAAKQGELD 123

Query: 62  PLKTFLAQVMEIEYTLYWKSFAENTPLHEAATVGNLGAVKLLVELRKEDLLEM-NIRGET 121
            L+  + +  E+  T+     +  T LH AA  G++  V+ L+E     L  +    G+T
Sbjct: 124 VLRVLMEEHPELSMTV---DLSNTTALHTAAAQGHVEVVEYLLEAAGSSLAAIAKSNGKT 183

Query: 122 PLYRAARYGKLEIVE 129
            L+ AAR G  E+V+
Sbjct: 184 ALHSAARNGHAEVVK 194

[Close]

BLAST of Carg27751 vs. TAIR 10
Match: AT2G24600.3 (Ankyrin repeat family protein )

HSP 1 Score: 43.1 bits (100), Expect = 1.9e-04
Identity = 30/80 (37.50%), Postives = 41/80 (51.25%), Query Frame = 0


Query: 53  EEPLKTFLAQVMEIEYTLYWKSFAE---NTPLHEAATVGNLGAVKLLVELRKEDLLEMNI 112
           +  L  FL  V   E +L  +S  +   NT LH AA +G+   V  ++ELR   L   N 
Sbjct: 10  QNDLPAFLGLVEARESSLEERSEEQNTNNTVLHVAAKLGHRELVAKIIELRPSLLSSRNA 69

Query: 113 RGETPLYRAARYGKLEIVEQ 130
            G+TPL+ AA  G + IV Q
Sbjct: 70  YGDTPLHLAALLGDVNIVMQ 89

[Close]

BLAST of Carg27751 vs. TAIR 10
Match: AT2G24600.1 (Ankyrin repeat family protein )

HSP 1 Score: 43.1 bits (100), Expect = 1.9e-04
Identity = 30/80 (37.50%), Postives = 41/80 (51.25%), Query Frame = 0


Query: 53  EEPLKTFLAQVMEIEYTLYWKSFAE---NTPLHEAATVGNLGAVKLLVELRKEDLLEMNI 112
           +  L  FL  V   E +L  +S  +   NT LH AA +G+   V  ++ELR   L   N 
Sbjct: 10  QNDLPAFLGLVEARESSLEERSEEQNTNNTVLHVAAKLGHRELVAKIIELRPSLLSSRNA 69

Query: 113 RGETPLYRAARYGKLEIVEQ 130
            G+TPL+ AA  G + IV Q
Sbjct: 70  YGDTPLHLAALLGDVNIVMQ 89

The following BLAST results are available for this feature:

BLAST of Carg27751 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7012621.1	6.8e-68	100.00	hypothetical protein SDJN02_25373 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022954461.1	2.6e-67	100.00	ankyrin repeat-containing protein ITN1-like [Cucurbita moschata]	[more]
KAG6573481.1	2.6e-67	100.00	Ankyrin repeat-containing protein NPR4, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022954412.1	2.6e-67	100.00	espin-like isoform X1 [Cucurbita moschata]	[more]
XP_022954413.1	2.6e-67	100.00	espin-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg27751 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P16157	6.5e-05	36.78	Ankyrin-1 OS=Homo sapiens OX=9606 GN=ANK1 PE=1 SV=3	[more]
Q02357	1.9e-04	36.47	Ankyrin-1 OS=Mus musculus OX=10090 GN=Ank1 PE=1 SV=2	[more]
Q9J4Z4	2.5e-04	35.23	Putative ankyrin repeat protein FPV246 OS=Fowlpox virus (strain NVSL) OX=928301 ...	[more]
P40480	3.2e-04	33.33	Protein HOS4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ...	[more]
Q8BTI7	4.2e-04	36.67	Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C OS=Mu...	[more]

BLAST of Carg27751 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GQZ1	1.3e-67	100.00	ankyrin repeat-containing protein ITN1-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1GR15	1.3e-67	100.00	espin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456673 PE=4 SV=1	[more]
A0A6J1GQX5	1.3e-67	100.00	espin-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456673 PE=4 SV=1	[more]
A0A6J1K0P4	7.6e-49	75.00	espin-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490547 PE=4 SV=1	[more]
A0A6J1JXD5	3.8e-48	74.22	uncharacterized protein LOC111490543 OS=Cucurbita maxima OX=3661 GN=LOC111490543...	[more]

BLAST of Carg27751 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54070.1	4.2e-07	26.05	Ankyrin repeat family protein	[more]
AT1G14500.1	1.3e-05	29.46	Ankyrin repeat family protein	[more]
AT5G60070.1	6.7e-05	26.67	ankyrin repeat family protein	[more]
AT2G24600.3	1.9e-04	37.50	Ankyrin repeat family protein	[more]
AT2G24600.1	1.9e-04	37.50	Ankyrin repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 39..68 e-value: 13.0 score: 14.7 coord: 76..106 e-value: 1.8 score: 17.6
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 110..129 score: 8.95002
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 3..129 e-value: 2.3E-17 score: 65.0
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 37..129
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 44..128 e-value: 2.5E-9 score: 37.6
None	No IPR available	PANTHER	PTHR24177:SF331	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 23..121
None	No IPR available	PANTHER	PTHR24177	CASKIN	coord: 23..121
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 110..129 score: 8.932349

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27751-RA	Carg27751-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding