Carg27732 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27732
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	AP2/ERF and B3 domain-containing transcription factor RAV1-like
Location	Carg_Chr04: 13539041 .. 13540018 (-)
RNA-Seq Expression	Carg27732
Synteny	Carg27732

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACACAACAAGCTCTTTAGACGACAGCGCCGCCAGTGACTCCACCTCCGTCTCTCCCGTCACCCCATTACTCTTCCACTCCTCCTCCTCCTCCTCCTCCCCCGGAGTACCCCACGACGCCGAATCCCGGAAGCTTCCATCTTCCCGTTTCAAAGGGGTCGTCCCTCAGCCCAACGGCCGATGGGGGGCTCAGATTTACGAGAAGCACCAAAGGGTCTGGTTGGGCACATTCAACCACGAACACCAGGCCGCCAAAGCCTACGACATCGCCGCCCTCCGCTTCCGCGGCCGCGACGCTGTCACCAATTTCAAGCCCGGCGCCTTCTCTTCCGTCGACGCCGCCTTCGAGGCTGACTTTCTCAACTCCCACTCCAAGCTCGAGATCGTCGACATGCTCCGCAAACACACCTACAATGACGAGCTCCAGCAAAGCAAGCGATACGGTGGAGGAACGACGACGACGACGACAGCGGCGGCGCACTCTCTCCAGAACGCGGCGTCGGAGTCGGACCGGGAGGTGCTGTTTGAGAAAACCGTGACGCCGAGCGACGTGGGGAAGTTGAACCGGCTGGTGATTCCGAAGCAACACGCGGAGAAGAATTTTCCATTGGGGGAAGGGATGGGTTCGGCCAAAGGAGTACTCCTGAATTTCGAGGATATGGGAGGGAAGCTGTGGCGGTTCCGGTACTCGTATTGGAACAGCAGCCAGAGCTATGTGTTGACCAAGGGATGGAGCCGGTTCGTAAAAGAGAAAACCCTCAGAGCCGGGGACGTGGTCCGGTTCCTACGCTCGACCGGCCCGGATAAGAAGCTTTACATCGATGGCAAAGCAGGCGGAGTGAAGCCGGTTCAAGTGGTAAAGCTATTTGGAGTGAATATTTTGGAAGTGCCGGTGGGGTGGTGCGGGAAGAGAGACAGAGAAGGCCTGTCGGAATTAGAAAGGGCGAAGAAGCAAAGAATAACCAAAGCATTGTAA

mRNA sequence

ATGGACACAACAAGCTCTTTAGACGACAGCGCCGCCAGTGACTCCACCTCCGTCTCTCCCGTCACCCCATTACTCTTCCACTCCTCCTCCTCCTCCTCCTCCCCCGGAGTACCCCACGACGCCGAATCCCGGAAGCTTCCATCTTCCCGTTTCAAAGGGGTCGTCCCTCAGCCCAACGGCCGATGGGGGGCTCAGATTTACGAGAAGCACCAAAGGGTCTGGTTGGGCACATTCAACCACGAACACCAGGCCGCCAAAGCCTACGACATCGCCGCCCTCCGCTTCCGCGGCCGCGACGCTGTCACCAATTTCAAGCCCGGCGCCTTCTCTTCCGTCGACGCCGCCTTCGAGGCTGACTTTCTCAACTCCCACTCCAAGCTCGAGATCGTCGACATGCTCCGCAAACACACCTACAATGACGAGCTCCAGCAAAGCAAGCGATACGGTGGAGGAACGACGACGACGACGACAGCGGCGGCGCACTCTCTCCAGAACGCGGCGTCGGAGTCGGACCGGGAGGTGCTGTTTGAGAAAACCGTGACGCCGAGCGACGTGGGGAAGTTGAACCGGCTGGTGATTCCGAAGCAACACGCGGAGAAGAATTTTCCATTGGGGGAAGGGATGGGTTCGGCCAAAGGAGTACTCCTGAATTTCGAGGATATGGGAGGGAAGCTGTGGCGGTTCCGGTACTCGTATTGGAACAGCAGCCAGAGCTATGTGTTGACCAAGGGATGGAGCCGGTTCGTAAAAGAGAAAACCCTCAGAGCCGGGGACGTGGTCCGGTTCCTACGCTCGACCGGCCCGGATAAGAAGCTTTACATCGATGGCAAAGCAGGCGGAGTGAAGCCGGTTCAAGTGGTAAAGCTATTTGGAGTGAATATTTTGGAAGTGCCGGTGGGGTGGTGCGGGAAGAGAGACAGAGAAGGCCTGTCGGAATTAGAAAGGGCGAAGAAGCAAAGAATAACCAAAGCATTGTAA

Coding sequence (CDS)

ATGGACACAACAAGCTCTTTAGACGACAGCGCCGCCAGTGACTCCACCTCCGTCTCTCCCGTCACCCCATTACTCTTCCACTCCTCCTCCTCCTCCTCCTCCCCCGGAGTACCCCACGACGCCGAATCCCGGAAGCTTCCATCTTCCCGTTTCAAAGGGGTCGTCCCTCAGCCCAACGGCCGATGGGGGGCTCAGATTTACGAGAAGCACCAAAGGGTCTGGTTGGGCACATTCAACCACGAACACCAGGCCGCCAAAGCCTACGACATCGCCGCCCTCCGCTTCCGCGGCCGCGACGCTGTCACCAATTTCAAGCCCGGCGCCTTCTCTTCCGTCGACGCCGCCTTCGAGGCTGACTTTCTCAACTCCCACTCCAAGCTCGAGATCGTCGACATGCTCCGCAAACACACCTACAATGACGAGCTCCAGCAAAGCAAGCGATACGGTGGAGGAACGACGACGACGACGACAGCGGCGGCGCACTCTCTCCAGAACGCGGCGTCGGAGTCGGACCGGGAGGTGCTGTTTGAGAAAACCGTGACGCCGAGCGACGTGGGGAAGTTGAACCGGCTGGTGATTCCGAAGCAACACGCGGAGAAGAATTTTCCATTGGGGGAAGGGATGGGTTCGGCCAAAGGAGTACTCCTGAATTTCGAGGATATGGGAGGGAAGCTGTGGCGGTTCCGGTACTCGTATTGGAACAGCAGCCAGAGCTATGTGTTGACCAAGGGATGGAGCCGGTTCGTAAAAGAGAAAACCCTCAGAGCCGGGGACGTGGTCCGGTTCCTACGCTCGACCGGCCCGGATAAGAAGCTTTACATCGATGGCAAAGCAGGCGGAGTGAAGCCGGTTCAAGTGGTAAAGCTATTTGGAGTGAATATTTTGGAAGTGCCGGTGGGGTGGTGCGGGAAGAGAGACAGAGAAGGCCTGTCGGAATTAGAAAGGGCGAAGAAGCAAAGAATAACCAAAGCATTGTAA

Protein sequence

MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSSSPGVPHDAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTAAAHSLQNAASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVKLFGVNILEVPVGWCGKRDREGLSELERAKKQRITKAL

Homology

[Close]

BLAST of Carg27732 vs. NCBI nr
Match: KAG7032471.1 (AP2/ERF and B3 domain-containing transcription repressor TEM1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 646.4 bits (1666), Expect = 1.4e-181
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSSSPGVPHDAESRKLPSSRFKGVVPQPNG 60
           MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSSSPGVPHDAESRKLPSSRFKGVVPQPNG
Sbjct: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSSSPGVPHDAESRKLPSSRFKGVVPQPNG 60

Query: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120
           RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF
Sbjct: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120

Query: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTAAAHSLQNAASESDREVLFEKTV 180
           LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTAAAHSLQNAASESDREVLFEKTV
Sbjct: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTAAAHSLQNAASESDREVLFEKTV 180

Query: 181 TPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSYV 240
           TPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSYV
Sbjct: 181 TPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSYV 240

Query: 241 LTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVKLFGVNILEVPVG 300
           LTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVKLFGVNILEVPVG
Sbjct: 241 LTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVKLFGVNILEVPVG 300

Query: 301 WCGKRDREGLSELERAKKQRITKAL 326
           WCGKRDREGLSELERAKKQRITKAL
Sbjct: 301 WCGKRDREGLSELERAKKQRITKAL 325

[Close]

BLAST of Carg27732 vs. NCBI nr
Match: KAG6601748.1 (AP2/ERF and B3 domain-containing transcription factor ARF14, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 640.6 bits (1651), Expect = 7.4e-180
Identity = 324/326 (99.39%), Postives = 325/326 (99.69%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSSSPGVPHDAESRKLPSSRFKGVVPQPNG 60
           MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSSSPGVPHDAESRKLPSSRFKGVVPQPNG
Sbjct: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSSSPGVPHDAESRKLPSSRFKGVVPQPNG 60

Query: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120
           RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF
Sbjct: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120

Query: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTT-AAAHSLQNAASESDREVLFEKT 180
           LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTT AAAHSLQNAASESDREVLFEKT
Sbjct: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTAAAAHSLQNAASESDREVLFEKT 180

Query: 181 VTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSY 240
           VTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKG+LLNFEDMGGKLWRFRYSYWNSSQSY
Sbjct: 181 VTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGLLLNFEDMGGKLWRFRYSYWNSSQSY 240

Query: 241 VLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVKLFGVNILEVPV 300
           VLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVKLFGVNILEVPV
Sbjct: 241 VLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVKLFGVNILEVPV 300

Query: 301 GWCGKRDREGLSELERAKKQRITKAL 326
           GWCGKRDREGLSELERAKKQRITKAL
Sbjct: 301 GWCGKRDREGLSELERAKKQRITKAL 326

[Close]

BLAST of Carg27732 vs. NCBI nr
Match: XP_022930067.1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita moschata])

HSP 1 Score: 627.5 bits (1617), Expect = 6.5e-176
Identity = 319/328 (97.26%), Postives = 320/328 (97.56%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSSSPGVPHDAESRKLPSSRFKGVVPQPNG 60
           MDTTSSLDDSAASDSTSVSPVTPLLFH   SSSSPGVPHDAESRKLPSSRFKGVVPQPNG
Sbjct: 1   MDTTSSLDDSAASDSTSVSPVTPLLFH---SSSSPGVPHDAESRKLPSSRFKGVVPQPNG 60

Query: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120
           RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF
Sbjct: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120

Query: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTT---AAAHSLQNAASESDREVLFE 180
           LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTT   AAAHSLQNAASESDREVLFE
Sbjct: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNAASESDREVLFE 180

Query: 181 KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQ 240
           KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQ
Sbjct: 181 KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQ 240

Query: 241 SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVKLFGVNILEV 300
           SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDG+AGGVKPVQVVKLFGVNILEV
Sbjct: 241 SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGRAGGVKPVQVVKLFGVNILEV 300

Query: 301 PVGWCGKRDREGLSELERAKKQRITKAL 326
           PVGWCGKRDREGLSELER KKQRI KAL
Sbjct: 301 PVGWCGKRDREGLSELERTKKQRIIKAL 325

[Close]

BLAST of Carg27732 vs. NCBI nr
Match: XP_023541268.1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 624.4 bits (1609), Expect = 5.5e-175
Identity = 315/326 (96.63%), Postives = 318/326 (97.55%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSSSPGVPHDAESRKLPSSRFKGVVPQPNG 60
           MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSS  PGVP+DAESRKLPSSRFKGVVPQPNG
Sbjct: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSCPPGVPYDAESRKLPSSRFKGVVPQPNG 60

Query: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120
           RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF
Sbjct: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120

Query: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTT-AAAHSLQNAASESDREVLFEKT 180
           LNSHSKLEIVDMLRKHTYNDE+QQSKRYGGGTTTTTT AAAHSLQNAASESDREVLFEKT
Sbjct: 121 LNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAHSLQNAASESDREVLFEKT 180

Query: 181 VTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSY 240
           VTPSDVGKLNRLVIPKQHAEKNFPLGEGMGS KG+LLNFEDMGGKLWRFRYSYWNSSQSY
Sbjct: 181 VTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQSY 240

Query: 241 VLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVKLFGVNILEVPV 300
           VLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGK GGVK VQVVKLFGVNILEVPV
Sbjct: 241 VLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKPGGVKAVQVVKLFGVNILEVPV 300

Query: 301 GWCGKRDREGLSELERAKKQRITKAL 326
           GWCGKRDREGLSELER KKQRI KAL
Sbjct: 301 GWCGKRDREGLSELERTKKQRIVKAL 326

[Close]

BLAST of Carg27732 vs. NCBI nr
Match: XP_022973620.1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita maxima])

HSP 1 Score: 621.3 bits (1601), Expect = 4.7e-174
Identity = 314/327 (96.02%), Postives = 318/327 (97.25%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSSSPGVPHDAESRKLPSSRFKGVVPQPNG 60
           MDTTSSLDDS ASDSTSVSPVTPLLFHSSSSSS PGVP+DAESRKLPSSRFKGVVPQPNG
Sbjct: 1   MDTTSSLDDSTASDSTSVSPVTPLLFHSSSSSSPPGVPYDAESRKLPSSRFKGVVPQPNG 60

Query: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120
           RWGAQIYEKHQRVWLGTFN EHQAAKAYDIAALR+RGRDAVTNFKPGAFSSVDAAFEADF
Sbjct: 61  RWGAQIYEKHQRVWLGTFNQEHQAAKAYDIAALRYRGRDAVTNFKPGAFSSVDAAFEADF 120

Query: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTT--TTTAAAHSLQNAASESDREVLFEK 180
           LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTT  T TAAAHSL NAASESDREVLFEK
Sbjct: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTATATAAAHSLHNAASESDREVLFEK 180

Query: 181 TVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQS 240
           TVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQS
Sbjct: 181 TVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQS 240

Query: 241 YVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVKLFGVNILEVP 300
           YVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVV+LFGVNILEVP
Sbjct: 241 YVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVRLFGVNILEVP 300

Query: 301 VGWCGKRDREGLSELERAKKQRITKAL 326
           VGWCGKRDREGLSELER KKQR+ KAL
Sbjct: 301 VGWCGKRDREGLSELERTKKQRMIKAL 327

[Close]

BLAST of Carg27732 vs. ExPASy Swiss-Prot
Match: Q9ZWM9 (AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana OX=3702 GN=RAV1 PE=1 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 7.4e-90
Identity = 202/339 (59.59%), Postives = 228/339 (67.26%), Query Frame = 0


Query: 3   TTSSLDDSAASDSTSVSPVTPLLFHSSSSS----SSPGVPHDAESRKLPSSRFKGVVPQP 62
           +T S+ ++ A      S V  L    S SS    S  GV  +AESRKLPSS++KGVVPQP
Sbjct: 12  STGSICETPAITPAKKSSVGNLYRMGSGSSVVLDSENGV--EAESRKLPSSKYKGVVPQP 71

Query: 63  NGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEA 122
           NGRWGAQIYEKHQRVWLGTFN E +AA+AYD+A  RFR RDAVTNFK           E 
Sbjct: 72  NGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDAVTNFKDVKMDE----DEV 131

Query: 123 DFLNSHSKLEIVDMLRKHTYNDELQQSK--RYGGGTTTTTTAAAHSLQNAASES---DRE 182
           DFLNSHSK EIVDMLRKHTYN+EL+QSK  R G G  T T   +    +  S +     E
Sbjct: 132 DFLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLLTSGLSNDGVSTTGFRSAE 191

Query: 183 VLFEKTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYW 242
            LFEK VTPSDVGKLNRLVIPK HAEK+FPL     S KGVLLNFED+ GK+WRFRYSYW
Sbjct: 192 ALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYW 251

Query: 243 NSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKA---GGVKPVQVVKLF 302
           NSSQSYVLTKGWSRFVKEK LRAGDVV F RS G D++LYI  K+     +   +V++LF
Sbjct: 252 NSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWKSRSGSDLDAGRVLRLF 311

Query: 303 GVNILEVP-----VGWCGKRDREGLSELERAKKQRITKA 325
           GVNI         VG     D E LS L  +KKQRI  A
Sbjct: 312 GVNISPESSRNDVVGNKRVNDTEMLS-LVCSKKQRIFHA 343

[Close]

BLAST of Carg27732 vs. ExPASy Swiss-Prot
Match: Q9C6M5 (AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis thaliana OX=3702 GN=TEM1 PE=1 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 3.7e-89
Identity = 205/360 (56.94%), Postives = 229/360 (63.61%), Query Frame = 0


Query: 8   DDSAASDSTSVS----------------PVTPLLFHSSSSSSSPGVPH-----DAESRKL 67
           D S  S+S S+S                P T +  +   S  S  V       + ESRKL
Sbjct: 8   DSSTTSESLSISTTPKPTTTTEKKLSSPPATSMRLYRMGSGGSSVVLDSENGVETESRKL 67

Query: 68  PSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKP 127
           PSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA +YDIA  RFRGRDAVTNFK 
Sbjct: 68  PSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRDAVTNFK- 127

Query: 128 GAFSSVDA-AFEADFLNSHSKLEIVDMLRKHTYNDELQQSKR---YGGGTTTTTTAAAHS 187
              S VD    E+ FL++HSK EIVDMLRKHTY DE +QS+R    G G  +    A + 
Sbjct: 128 ---SQVDGNDAESAFLDAHSKAEIVDMLRKHTYADEFEQSRRKFVNGDGKRSGLETATYG 187

Query: 188 LQNAASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPL-------GEGMGSAKGVL 247
             N A    REVLFEKTVTPSDVGKLNRLVIPKQHAEK+FPL       G      KGVL
Sbjct: 188 --NDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVL 247

Query: 248 LNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYID 307
           +N ED  GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK LRAGDVV F RSTGPD++LYI 
Sbjct: 248 INLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDRQLYIH 307

Query: 308 GKAGGVKPVQVVKLFGVNIL--------EVPVGWCG-KRDRE-GLSELERAKKQRITKAL 326
            K        VV+LFGVNI         +V V   G KR RE  L  L  +KKQ I   L
Sbjct: 308 WKVRSSPVQTVVRLFGVNIFNVSNEKPNDVAVECVGKKRSREDDLFSLGCSKKQAIINIL 361

[Close]

BLAST of Carg27732 vs. ExPASy Swiss-Prot
Match: Q9LS06 (AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thaliana OX=3702 GN=ARF14 PE=2 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.4e-88
Identity = 195/339 (57.52%), Postives = 229/339 (67.55%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDST-----SVSPVTPLLFHSSS-------SSSSPGVPHDAESRKLPS 60
           MD  SS+D+S+ +  +     S SP + LL+   S       S +   V  +AESRKLPS
Sbjct: 1   MDAMSSVDESSTTTDSIPARKSSSPAS-LLYRMGSGTSVVLDSENGVEVEVEAESRKLPS 60

Query: 61  SRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGA 120
           SRFKGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA+AYD+AA RFRGRDAVTNFK   
Sbjct: 61  SRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDTT 120

Query: 121 FSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTA-AAHSLQNAA 180
           F       E +FLN+HSK EIVDMLRKHTY +EL Q KR   G    TTA A  S+    
Sbjct: 121 FEE-----EVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMT 180

Query: 181 SESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNF--PLGEGMGSAKGVLLNFEDMGGKL 240
                E+LFEKTVTPSDVGKLNRLVIPK  AEK+F  PLG    S KG+LLNFED+ GK+
Sbjct: 181 GFKTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKV 240

Query: 241 WRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGG---VK 300
           WRFRYSYWNSSQSYVLTKGWSRFVKEK L AGD++ F RS   D+K +I  K+     ++
Sbjct: 241 WRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKSGLDLE 300

Query: 301 PVQVVKLFGVNILEVPVGWCGKRDREGLSELERAKKQRI 322
             +V++LFGV+I  +      K   E L    R KKQR+
Sbjct: 301 TGRVMRLFGVDI-SLNAVVVVKETTEVLMSSLRCKKQRV 332

[Close]

BLAST of Carg27732 vs. ExPASy Swiss-Prot
Match: P82280 (AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis thaliana OX=3702 GN=RAV2 PE=1 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 4.1e-88
Identity = 203/365 (55.62%), Postives = 231/365 (63.29%), Query Frame = 0


Query: 4   TSSLDDSAASDSTSVSPVTP-----------LLFHSSSSSSS----PGVPHDAESRKLPS 63
           +S +D+ ++S S S S  T             L+   S  SS    P    + ESRKLPS
Sbjct: 3   SSCIDEISSSTSESFSATTAKKLSPPPAAALRLYRMGSGGSSVVLDPENGLETESRKLPS 62

Query: 64  SRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGA 123
           S++KGVVPQPNGRWGAQIYEKHQRVWLGTFN + +AA++YDIAA RFRGRDAV NFK   
Sbjct: 63  SKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNFK-NV 122

Query: 124 FSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDELQQS-------------KRYGGGTTTT 183
               D A    FL +HSK EIVDMLRKHTY DEL+Q+             KR G  TT  
Sbjct: 123 LEDGDLA----FLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKRNGSSTT-- 182

Query: 184 TTAAAHSLQNAASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPL-GEGMGSAKGV 243
                   QN      REVLFEK VTPSDVGKLNRLVIPKQHAEK+FPL        KGV
Sbjct: 183 --------QNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGV 242

Query: 244 LLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYI 303
           L+NFED+ GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK LRAGDVV F RSTG +++LYI
Sbjct: 243 LINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYI 302

Query: 304 DGKAGG---VKPVQ-VVKLFGVNILEVP-------VGWCG---KRDREGLSELERAKKQR 326
           D K        PVQ VV+LFGV+I  V        V  CG    RD + +  L  +KKQ 
Sbjct: 303 DWKVRSGPRENPVQVVVRLFGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFALRCSKKQA 352

[Close]

BLAST of Carg27732 vs. ExPASy Swiss-Prot
Match: Q8RZX9 (AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0693400 PE=2 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 4.5e-87
Identity = 176/282 (62.41%), Postives = 197/282 (69.86%), Query Frame = 0


Query: 45  KLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNF 104
           KLPSS+FKGVVPQPNGRWGAQIYE+HQRVWLGTF  E  AA+AYD+AA RFRGRDAVTNF
Sbjct: 76  KLPSSKFKGVVPQPNGRWGAQIYERHQRVWLGTFAGEDDAARAYDVAAQRFRGRDAVTNF 135

Query: 105 KPGAFSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTAAAHSLQ 164
           +P A +  DAA E  FL + SK E+VDMLRKHTY DEL QSKR    +T +      SL 
Sbjct: 136 RPLAEADPDAAAELRFLATRSKAEVVDMLRKHTYFDELAQSKRTFAASTPSAATTTASLS 195

Query: 165 NA---------ASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFP--LGEGMGSAKG 224
           N          A  + R+ LF+KTVTPSDVGKLNRLVIPKQHAEK+FP  L    G +KG
Sbjct: 196 NGHLSSPRSPFAPAAARDHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKG 255

Query: 225 VLLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLR---STGPDK 284
           VLLNFED  GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK L AGDVV F R   S G D 
Sbjct: 256 VLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDG 315

Query: 285 KLYIDGK--------------AGGVKPVQVVKLFGVNILEVP 299
           KL+ID K                   PV+ V+LFGV++L  P
Sbjct: 316 KLFIDCKLVRSTGAALASPADQPAPSPVKAVRLFGVDLLTAP 357

[Close]

BLAST of Carg27732 vs. ExPASy TrEMBL
Match: A0A6J1EPB7 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita moschata OX=3662 GN=LOC111436555 PE=3 SV=1)

HSP 1 Score: 627.5 bits (1617), Expect = 3.2e-176
Identity = 319/328 (97.26%), Postives = 320/328 (97.56%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSSSPGVPHDAESRKLPSSRFKGVVPQPNG 60
           MDTTSSLDDSAASDSTSVSPVTPLLFH   SSSSPGVPHDAESRKLPSSRFKGVVPQPNG
Sbjct: 1   MDTTSSLDDSAASDSTSVSPVTPLLFH---SSSSPGVPHDAESRKLPSSRFKGVVPQPNG 60

Query: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120
           RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF
Sbjct: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120

Query: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTT---AAAHSLQNAASESDREVLFE 180
           LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTT   AAAHSLQNAASESDREVLFE
Sbjct: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNAASESDREVLFE 180

Query: 181 KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQ 240
           KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQ
Sbjct: 181 KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQ 240

Query: 241 SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVKLFGVNILEV 300
           SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDG+AGGVKPVQVVKLFGVNILEV
Sbjct: 241 SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGRAGGVKPVQVVKLFGVNILEV 300

Query: 301 PVGWCGKRDREGLSELERAKKQRITKAL 326
           PVGWCGKRDREGLSELER KKQRI KAL
Sbjct: 301 PVGWCGKRDREGLSELERTKKQRIIKAL 325

[Close]

BLAST of Carg27732 vs. ExPASy TrEMBL
Match: A0A6J1IBU1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita maxima OX=3661 GN=LOC111472203 PE=3 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 2.3e-174
Identity = 314/327 (96.02%), Postives = 318/327 (97.25%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSSSPGVPHDAESRKLPSSRFKGVVPQPNG 60
           MDTTSSLDDS ASDSTSVSPVTPLLFHSSSSSS PGVP+DAESRKLPSSRFKGVVPQPNG
Sbjct: 1   MDTTSSLDDSTASDSTSVSPVTPLLFHSSSSSSPPGVPYDAESRKLPSSRFKGVVPQPNG 60

Query: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120
           RWGAQIYEKHQRVWLGTFN EHQAAKAYDIAALR+RGRDAVTNFKPGAFSSVDAAFEADF
Sbjct: 61  RWGAQIYEKHQRVWLGTFNQEHQAAKAYDIAALRYRGRDAVTNFKPGAFSSVDAAFEADF 120

Query: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTT--TTTAAAHSLQNAASESDREVLFEK 180
           LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTT  T TAAAHSL NAASESDREVLFEK
Sbjct: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTATATAAAHSLHNAASESDREVLFEK 180

Query: 181 TVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQS 240
           TVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQS
Sbjct: 181 TVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQS 240

Query: 241 YVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVKLFGVNILEVP 300
           YVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVV+LFGVNILEVP
Sbjct: 241 YVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVRLFGVNILEVP 300

Query: 301 VGWCGKRDREGLSELERAKKQRITKAL 326
           VGWCGKRDREGLSELER KKQR+ KAL
Sbjct: 301 VGWCGKRDREGLSELERTKKQRMIKAL 327

[Close]

BLAST of Carg27732 vs. ExPASy TrEMBL
Match: A0A6J1E5P2 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita moschata OX=3662 GN=LOC111430186 PE=3 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 5.8e-130
Identity = 251/328 (76.52%), Postives = 272/328 (82.93%), Query Frame = 0


Query: 5   SSLDDSAASDSTSVSPVTPLLFHSSSSSSSPGVPHDAESRKLPSSRFKGVVPQPNGRWGA 64
           SS+D+S  SDSTS+SPVTPLLFH   SS +PG+PH+AESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 4   SSIDESRGSDSTSISPVTPLLFH---SSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 63

Query: 65  QIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSH 124
           QIYEKHQRVWLGTFN EH AA AYDIAALRFRGRDAVTNFK         A E +FLNSH
Sbjct: 64  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLDDEDDKDAMEGEFLNSH 123

Query: 125 SKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTAAAHSLQNAASESDREVLFEKTVTPSD 184
           SKLEIVDMLRKHTYN+EL+QSKR  G      TA  HS      +S REVLFEKTVTPSD
Sbjct: 124 SKLEIVDMLRKHTYNEELEQSKRQRGAIAAANTAVHHS----GVDSKREVLFEKTVTPSD 183

Query: 185 VGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSYVLTKG 244
           VGKLNRLVIPKQHAEKNFP+GEG+GS KG+LLN EDMGGK+WRFRYSYWNSSQSYVLTKG
Sbjct: 184 VGKLNRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTKG 243

Query: 245 WSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKA---GGVKPVQVVKLFGVNILEV--PV 304
           WSRFVKEK+LRAGDVVRFLRSTG DK+LYIDGKA   GGVK V VVKLFGVNILEV  PV
Sbjct: 244 WSRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKATSEGGVKAVHVVKLFGVNILEVPLPV 303

Query: 305 GWCG--KRDREGLSELERAKKQRITKAL 326
           G CG   +++  L EL+ +KKQRI KAL
Sbjct: 304 GRCGGEPKNQGVLLELQPSKKQRIIKAL 324

[Close]

BLAST of Carg27732 vs. ExPASy TrEMBL
Match: A0A6J1IG08 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita maxima OX=3661 GN=LOC111472990 PE=3 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 7.6e-130
Identity = 250/328 (76.22%), Postives = 272/328 (82.93%), Query Frame = 0


Query: 5   SSLDDSAASDSTSVSPVTPLLFHSSSSSSSPGVPHDAESRKLPSSRFKGVVPQPNGRWGA 64
           SS+D+S+ SDSTS+SP+TPLLFH   SS +PG+PH+AESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 29  SSIDESSGSDSTSISPITPLLFH---SSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 88

Query: 65  QIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSH 124
           QIYEKHQRVWLGTFN EH AA AYDIAALRFRGRDAVTNFK       + A E +FLNSH
Sbjct: 89  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLDDDDDNDAMEGEFLNSH 148

Query: 125 SKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTAAAHSLQNAASESDREVLFEKTVTPSD 184
           SKLEIVDMLRKHTYN+ELQQSKR  G      T   HS      +S REVLFEKTVTPSD
Sbjct: 149 SKLEIVDMLRKHTYNEELQQSKRQRGAIAAANTPVHHS----GVDSKREVLFEKTVTPSD 208

Query: 185 VGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSYVLTKG 244
           VGKLNRLVIPKQHAEKNFP GEG+GS KG+LLN EDMGGK+WRFRYSYWNSSQSYVLTKG
Sbjct: 209 VGKLNRLVIPKQHAEKNFPTGEGLGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTKG 268

Query: 245 WSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKA---GGVKPVQVVKLFGVNILEV--PV 304
           WSRFVKEK+LRAGDVVRFLRSTG DK+LYIDGKA   GGVK V VVKLFGVNILEV  PV
Sbjct: 269 WSRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVKAVHVVKLFGVNILEVPLPV 328

Query: 305 GWCG--KRDREGLSELERAKKQRITKAL 326
           G CG   +++  L EL+ +KKQRI KAL
Sbjct: 329 GRCGGEPKNQGVLLELQPSKKQRIIKAL 349

[Close]

BLAST of Carg27732 vs. ExPASy TrEMBL
Match: A0A5D3BWI9 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00090 PE=3 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 4.8e-124
Identity = 241/326 (73.93%), Postives = 267/326 (81.90%), Query Frame = 0


Query: 5   SSLDDSAASDSTSVSPVTPLLFHSSSSSSSPGVPHDAESRKLPSSRFKGVVPQPNGRWGA 64
           SS+D+S ASDSTS+SPVTPLLFHSS S+++     +AESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 4   SSIDESTASDSTSISPVTPLLFHSSPSATA-----EAESRKLPSSRFKGVVPQPNGRWGA 63

Query: 65  QIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSH 124
           QIYEKHQRVWLGTFN E+ AAKAYDIAALRFRGRDAVTNFKP      D A EADFLNSH
Sbjct: 64  QIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDHALEADFLNSH 123

Query: 125 SKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTAA--AHSLQNAASESDREVLFEKTVTP 184
           SKLEIVDMLRKHTYN+ELQQSKR+  G     + +   +S   + S+S REVLFEKTVTP
Sbjct: 124 SKLEIVDMLRKHTYNEELQQSKRHQRGAMAVDSGSFPHYSGSGSGSDSKREVLFEKTVTP 183

Query: 185 SDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSYVLT 244
           SDVGKLNRLVIPKQHAEKNFP+ EG+ S KG+LLNFEDMGGK+WRFRYSYWNSSQSYVLT
Sbjct: 184 SDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLT 243

Query: 245 KGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDG---KAGGVKPVQVVKLFGVNILEVPV 304
           KGWSRFVK+ TLRAGDVVRFLRSTGPDK+LYI      A G+KPV VVKLFGVNIL++PV
Sbjct: 244 KGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPINAPGIKPVHVVKLFGVNILQLPV 303

Query: 305 GWCGKRDREGLSELERAKKQRITKAL 326
              GK +   L   +  KKQRI K L
Sbjct: 304 ---GKTEGAFLELQQPTKKQRIIKPL 321

[Close]

BLAST of Carg27732 vs. TAIR 10
Match: AT1G13260.1 (related to ABI3/VP1 1 )

HSP 1 Score: 332.0 bits (850), Expect = 5.3e-91
Identity = 202/339 (59.59%), Postives = 228/339 (67.26%), Query Frame = 0


Query: 3   TTSSLDDSAASDSTSVSPVTPLLFHSSSSS----SSPGVPHDAESRKLPSSRFKGVVPQP 62
           +T S+ ++ A      S V  L    S SS    S  GV  +AESRKLPSS++KGVVPQP
Sbjct: 12  STGSICETPAITPAKKSSVGNLYRMGSGSSVVLDSENGV--EAESRKLPSSKYKGVVPQP 71

Query: 63  NGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEA 122
           NGRWGAQIYEKHQRVWLGTFN E +AA+AYD+A  RFR RDAVTNFK           E 
Sbjct: 72  NGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDAVTNFKDVKMDE----DEV 131

Query: 123 DFLNSHSKLEIVDMLRKHTYNDELQQSK--RYGGGTTTTTTAAAHSLQNAASES---DRE 182
           DFLNSHSK EIVDMLRKHTYN+EL+QSK  R G G  T T   +    +  S +     E
Sbjct: 132 DFLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLLTSGLSNDGVSTTGFRSAE 191

Query: 183 VLFEKTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYW 242
            LFEK VTPSDVGKLNRLVIPK HAEK+FPL     S KGVLLNFED+ GK+WRFRYSYW
Sbjct: 192 ALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYW 251

Query: 243 NSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKA---GGVKPVQVVKLF 302
           NSSQSYVLTKGWSRFVKEK LRAGDVV F RS G D++LYI  K+     +   +V++LF
Sbjct: 252 NSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWKSRSGSDLDAGRVLRLF 311

Query: 303 GVNILEVP-----VGWCGKRDREGLSELERAKKQRITKA 325
           GVNI         VG     D E LS L  +KKQRI  A
Sbjct: 312 GVNISPESSRNDVVGNKRVNDTEMLS-LVCSKKQRIFHA 343

[Close]

BLAST of Carg27732 vs. TAIR 10
Match: AT1G25560.1 (AP2/B3 transcription factor family protein )

HSP 1 Score: 329.7 bits (844), Expect = 2.6e-90
Identity = 205/360 (56.94%), Postives = 229/360 (63.61%), Query Frame = 0


Query: 8   DDSAASDSTSVS----------------PVTPLLFHSSSSSSSPGVPH-----DAESRKL 67
           D S  S+S S+S                P T +  +   S  S  V       + ESRKL
Sbjct: 8   DSSTTSESLSISTTPKPTTTTEKKLSSPPATSMRLYRMGSGGSSVVLDSENGVETESRKL 67

Query: 68  PSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKP 127
           PSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA +YDIA  RFRGRDAVTNFK 
Sbjct: 68  PSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRDAVTNFK- 127

Query: 128 GAFSSVDA-AFEADFLNSHSKLEIVDMLRKHTYNDELQQSKR---YGGGTTTTTTAAAHS 187
              S VD    E+ FL++HSK EIVDMLRKHTY DE +QS+R    G G  +    A + 
Sbjct: 128 ---SQVDGNDAESAFLDAHSKAEIVDMLRKHTYADEFEQSRRKFVNGDGKRSGLETATYG 187

Query: 188 LQNAASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPL-------GEGMGSAKGVL 247
             N A    REVLFEKTVTPSDVGKLNRLVIPKQHAEK+FPL       G      KGVL
Sbjct: 188 --NDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVL 247

Query: 248 LNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYID 307
           +N ED  GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK LRAGDVV F RSTGPD++LYI 
Sbjct: 248 INLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDRQLYIH 307

Query: 308 GKAGGVKPVQVVKLFGVNIL--------EVPVGWCG-KRDRE-GLSELERAKKQRITKAL 326
            K        VV+LFGVNI         +V V   G KR RE  L  L  +KKQ I   L
Sbjct: 308 WKVRSSPVQTVVRLFGVNIFNVSNEKPNDVAVECVGKKRSREDDLFSLGCSKKQAIINIL 361

[Close]

BLAST of Carg27732 vs. TAIR 10
Match: AT3G25730.1 (ethylene response DNA binding factor 3 )

HSP 1 Score: 327.8 bits (839), Expect = 1.0e-89
Identity = 195/339 (57.52%), Postives = 229/339 (67.55%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDST-----SVSPVTPLLFHSSS-------SSSSPGVPHDAESRKLPS 60
           MD  SS+D+S+ +  +     S SP + LL+   S       S +   V  +AESRKLPS
Sbjct: 1   MDAMSSVDESSTTTDSIPARKSSSPAS-LLYRMGSGTSVVLDSENGVEVEVEAESRKLPS 60

Query: 61  SRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGA 120
           SRFKGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA+AYD+AA RFRGRDAVTNFK   
Sbjct: 61  SRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDTT 120

Query: 121 FSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTA-AAHSLQNAA 180
           F       E +FLN+HSK EIVDMLRKHTY +EL Q KR   G    TTA A  S+    
Sbjct: 121 FEE-----EVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMT 180

Query: 181 SESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNF--PLGEGMGSAKGVLLNFEDMGGKL 240
                E+LFEKTVTPSDVGKLNRLVIPK  AEK+F  PLG    S KG+LLNFED+ GK+
Sbjct: 181 GFKTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKV 240

Query: 241 WRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGG---VK 300
           WRFRYSYWNSSQSYVLTKGWSRFVKEK L AGD++ F RS   D+K +I  K+     ++
Sbjct: 241 WRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKSGLDLE 300

Query: 301 PVQVVKLFGVNILEVPVGWCGKRDREGLSELERAKKQRI 322
             +V++LFGV+I  +      K   E L    R KKQR+
Sbjct: 301 TGRVMRLFGVDI-SLNAVVVVKETTEVLMSSLRCKKQRV 332

[Close]

BLAST of Carg27732 vs. TAIR 10
Match: AT1G68840.1 (related to ABI3/VP1 2 )

HSP 1 Score: 326.2 bits (835), Expect = 2.9e-89
Identity = 203/365 (55.62%), Postives = 231/365 (63.29%), Query Frame = 0


Query: 4   TSSLDDSAASDSTSVSPVTP-----------LLFHSSSSSSS----PGVPHDAESRKLPS 63
           +S +D+ ++S S S S  T             L+   S  SS    P    + ESRKLPS
Sbjct: 3   SSCIDEISSSTSESFSATTAKKLSPPPAAALRLYRMGSGGSSVVLDPENGLETESRKLPS 62

Query: 64  SRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGA 123
           S++KGVVPQPNGRWGAQIYEKHQRVWLGTFN + +AA++YDIAA RFRGRDAV NFK   
Sbjct: 63  SKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNFK-NV 122

Query: 124 FSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDELQQS-------------KRYGGGTTTT 183
               D A    FL +HSK EIVDMLRKHTY DEL+Q+             KR G  TT  
Sbjct: 123 LEDGDLA----FLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKRNGSSTT-- 182

Query: 184 TTAAAHSLQNAASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPL-GEGMGSAKGV 243
                   QN      REVLFEK VTPSDVGKLNRLVIPKQHAEK+FPL        KGV
Sbjct: 183 --------QNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGV 242

Query: 244 LLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYI 303
           L+NFED+ GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK LRAGDVV F RSTG +++LYI
Sbjct: 243 LINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYI 302

Query: 304 DGKAGG---VKPVQ-VVKLFGVNILEVP-------VGWCG---KRDREGLSELERAKKQR 326
           D K        PVQ VV+LFGV+I  V        V  CG    RD + +  L  +KKQ 
Sbjct: 303 DWKVRSGPRENPVQVVVRLFGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFALRCSKKQA 352

[Close]

BLAST of Carg27732 vs. TAIR 10
Match: AT1G68840.2 (related to ABI3/VP1 2 )

HSP 1 Score: 326.2 bits (835), Expect = 2.9e-89
Identity = 203/365 (55.62%), Postives = 231/365 (63.29%), Query Frame = 0


Query: 4   TSSLDDSAASDSTSVSPVTP-----------LLFHSSSSSSS----PGVPHDAESRKLPS 63
           +S +D+ ++S S S S  T             L+   S  SS    P    + ESRKLPS
Sbjct: 3   SSCIDEISSSTSESFSATTAKKLSPPPAAALRLYRMGSGGSSVVLDPENGLETESRKLPS 62

Query: 64  SRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGA 123
           S++KGVVPQPNGRWGAQIYEKHQRVWLGTFN + +AA++YDIAA RFRGRDAV NFK   
Sbjct: 63  SKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNFK-NV 122

Query: 124 FSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDELQQS-------------KRYGGGTTTT 183
               D A    FL +HSK EIVDMLRKHTY DEL+Q+             KR G  TT  
Sbjct: 123 LEDGDLA----FLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKRNGSSTT-- 182

Query: 184 TTAAAHSLQNAASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPL-GEGMGSAKGV 243
                   QN      REVLFEK VTPSDVGKLNRLVIPKQHAEK+FPL        KGV
Sbjct: 183 --------QNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGV 242

Query: 244 LLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYI 303
           L+NFED+ GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK LRAGDVV F RSTG +++LYI
Sbjct: 243 LINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYI 302

Query: 304 DGKAGG---VKPVQ-VVKLFGVNILEVP-------VGWCG---KRDREGLSELERAKKQR 326
           D K        PVQ VV+LFGV+I  V        V  CG    RD + +  L  +KKQ 
Sbjct: 303 DWKVRSGPRENPVQVVVRLFGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFALRCSKKQA 352

The following BLAST results are available for this feature:

BLAST of Carg27732 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032471.1	1.4e-181	100.00	AP2/ERF and B3 domain-containing transcription repressor TEM1, partial [Cucurbit...	[more]
KAG6601748.1	7.4e-180	99.39	AP2/ERF and B3 domain-containing transcription factor ARF14, partial [Cucurbita ...	[more]
XP_022930067.1	6.5e-176	97.26	AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita mosch...	[more]
XP_023541268.1	5.5e-175	96.63	AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita pepo ...	[more]
XP_022973620.1	4.7e-174	96.02	AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita maxim...	[more]

BLAST of Carg27732 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZWM9	7.4e-90	59.59	AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thalia...	[more]
Q9C6M5	3.7e-89	56.94	AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis tha...	[more]
Q9LS06	1.4e-88	57.52	AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thali...	[more]
P82280	4.1e-88	55.62	AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis tha...	[more]
Q8RZX9	4.5e-87	62.41	AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. jap...	[more]

BLAST of Carg27732 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EPB7	3.2e-176	97.26	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita mos...	[more]
A0A6J1IBU1	2.3e-174	96.02	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita max...	[more]
A0A6J1E5P2	5.8e-130	76.52	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita mos...	[more]
A0A6J1IG08	7.6e-130	76.22	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita max...	[more]
A0A5D3BWI9	4.8e-124	73.93	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucumis melo ...	[more]

BLAST of Carg27732 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13260.1	5.3e-91	59.59	related to ABI3/VP1 1	[more]
AT1G25560.1	2.6e-90	56.94	AP2/B3 transcription factor family protein	[more]
AT3G25730.1	1.0e-89	57.52	ethylene response DNA binding factor 3	[more]
AT1G68840.1	2.9e-89	55.62	related to ABI3/VP1 2	[more]
AT1G68840.2	2.9e-89	55.62	related to ABI3/VP1 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 176..278 e-value: 7.1E-23 score: 92.0
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 176..270 e-value: 1.2E-26 score: 92.5
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 176..278 score: 13.648081
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 175..262 e-value: 2.32237E-26 score: 98.554
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 50..111 e-value: 1.4E-27 score: 107.6
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 49..97 e-value: 1.3E-7 score: 31.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 50..105 score: 19.941164
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 49..104 e-value: 1.18963E-24 score: 92.7198
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 49..106 e-value: 2.8E-20 score: 74.2
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 164..281 e-value: 1.5E-43 score: 149.3
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 172..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..57
None	No IPR available	PANTHER	PTHR31140:SF1	AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR TEM1	coord: 37..301
IPR044800	B3 domain-containing transcription factor LEC2-like	PANTHER	PTHR31140	B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3	coord: 37..301
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 49..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27732-RA	Carg27732-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity