Carg27607 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCTCTCATGTATTCCTAGTGAACGATTGACGCAAGTTTTTGTGAATGCAGTAACAAAGTTATTTGGTGGTGAGTCGACAGTCGGTATTAGTTGTCTTCACAGTTTGTGGTCTTGATGAATGTATATTTGATAATAGTTCGTGAATGAATCTGAATTTGATTTCTTGCATTTTGGTTTCTCACTTTTGAGTCTTAACAAAATGTGAGGTGGAAATTTTGAATTCTTGACCTTTTAGTTGAAGGCATATATATGCTTTAACAAGTTGAACTATGATTTGGTTGTCATTCATTTAGGCAAGAGGGAATTTATTAGAGGGTCTAACTTCATACTTTGAGATGTCTGCCATTGCATAAACTATAGCCTTTTTTTGTCACATTCAACAAAAGGTCAATTCGGAGCCAAAGCCTTGCAAACGGTATATAGGATCATTAATAATAATAGTGAAGAAAAATGATAAACATAAAATTTGAGTTCACTTAATACAATATTTCAACCGAGTTGGATGCTGTCTTATATGAGTCTTCAATTGCAGGCCATCTTATAAAACAAGTTAGCCTTGGGAATTATGTTGAGGACAAAGTTCCAAGTTTGAAGCATTTCATGATTGAAGGAAATGCAGGCCATGAGCATAGCATACCATCCTTGGCAGCCCTTGCAAGATCGATGCAATTGCTTCAGAGGTTCTGATCTGGCCATGAATCGTAACTCAAATTCTATTTAGCTAATTGATCATAATATATTTTTGTGCTGAATGAACGACTGATCTTCATCTCCTCACTTTTTACTTCTCCTTTGTAGGTATGAGTTCAAAATCAATCACGAAGAATGGGTTAGGACTTGCAATCCTCATTTGGGTCCAGGAATATCAGAACGAGTATTAGAAGCCATGAGGACGACAGATGAGAATATTGATCTGTGTCGTTCCATTAAAATCAAGCTGCGGGAAGCTCTTGCTTCTCTTCTTGAAGTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACCCAGATTACAAATTTCGAAGTAAAATAGTTAGCAACTTAAAATGTATGCATTTTCCTTTTAGTTGACAGGTATAAATAGTGGGAGTTAGGATAGAATTTTGGAAATTAGTTTTGAGGGAGAGCTCCTCAAAAGGCTAAAACCTGTGTAACTCAAGTAGTGTTTTGGTCAACTTGGGCATAACTCAAGTAGTTAGTCATTTATACCTTTTCCTATGAGTTATAAATTCAAATCTCCTCTCCTTTATGTGGAATAGAATATATTTATATATAGCAAACAGTGAGACAAGGAATCGAATAGGGGACATGAGAGTTTCTTCTCATCCAGCTGCTTTACTTACCTTATTTAATTTAGTAAAGGAGTGAAAGAGAATTCTGTTGAACACAACTCTCTGCGAGAATATTAAGACCCATCGAAAAGGAATTTACAAAACACTCTGTAGAAACTACTCCTTTGTATTGTTTGGGATTTCTTGGGATGATGATCTAAAGTAGGATGGAGGGGTATTTATACGAGAGGGTAGTCAATCTATTCCTAAAATTTCTCACCCTTTTCTCTAGAATACTTAAATCATTTTCTTAAATTTATTCCTGAAATCCCTAAATCATAAATATAATTATTCATACATTAATAATAATAATGGTTGGGCTTAACCCTATTGGGCTAGTGATGACATTTTAACAAATTCTTGTTGAGTATTTCCTTCCTGTTTAGTCGAATTAATCTTTCGTTTCGTATTTCGTTTCGTATTTCGTTCCTCGAATTAATCTTTCGTTTCGTATTTTGTTCCTCTTTTTTCTTATTCTTTGATAAAGGTAAAGGAGAATGGATCTTGTCTTGCTTTCTTCTTTCTCTTTTTCAATGAAGTAAATTCCTTTCTAGTTTCTGCCTTCATTTGTCCGGCAACGGATTTGTCCAAAAGCTCCTTCTTTTGTTCTAGTTCCCTATTTGCTTCTGCTAGTGAGACAATGGCGGTATCTTGGTAATTGACCTCCTGCCCCAATTGGTTCCTTAATGCCTCAAAAAAAAAAAAAAAGTTTTAATTGAATCTAAAGAGACTACCTTCGACCTTTCCTCAAGTAATTGGATGGAAAGAGTGAGCCCTTCATTCAAAGTTTCACTTATTATCTAAGAAAAGGAGCTCTTAGCATAACTTTTGATCATTGAATGTGGTCGACCATTAGGCTTGGGTTATATATATATATAGTTTACTTGGGCAACTACAAAGTGACATCTAGCTATCATATCAAATTATGGGGTGAAATTTGTTTTAGAGTTATAGCGGCACATTGGAGTTTGTTTAATGAAGAGTTTTTACGATACACGATTTACTTTTTTCGGTTCGTGAATCATAATTTTAAACTAATCTTGAGCTATTATTTTGGATCATTTCATTTCAGGATTTTGGGGTCCTTGTAATTCCTACAGTCCCAGGCCCCCCTCCAGAACTAAACACAGACGTCTCGAAGCTACACAACTTTCGTGCGAAAGCTTTCAGCTTGCTTTCCATTGCTGGAGTTTCTGGATTGTGTCAGGTTCCCTCTCTCTCTCTCTGTCTCTCCCAAAAGTTGTAGCAACCATTTTGATGTTCCTTTTCCTGACTAAGTAATCTGCAGGTTAGCATACCTCTAGGCTTGTACAATGGCCTTCCGGTATCATTATCTTTGCTAGCAAAACATGGTTCAGATGGATTTTTGCTCAATGTTGTTGATAGTCTTTACAACACTCTAAAACAAGAAGTTGAGGTAAGCTTCTAAGAAATCTAAAAGAAACTACCTTGATGCTTGAAAATTGCTGTCCTATTTTCAGATTGGAAGAATAAGAGCATGTGCAAGCCAGGTATAAGCATTTTGATTAGCTTTTCTTTTTCTAGCGATGAATCAATTTTAAGTTGATTGAATGATGAGATGTTTGATACTCGATCTGTCTCATGTATTGTTCTGTGTATAGCTGTTGATAATGAATCTTTAGAACAATGCTCCACTATTCTTCCATACTTATTTCTGGAGTTTTGAATCACTCGATGAGATATTTATTCATGATTTTTTTGAAATGTTGGTCAAAATCAATGGATATGTTGATTACAAAATTATGAAAATCATAGATATTATTGGAAGGCGGTTAGAAATCACGAACCTTGGCATAATATTGTCCACTTTGAGTATAAACTCTCATC ATGAAGCTCTCATGTATTCCTAGTGAACGATTGACGCAAGTTTTTGTGAATGCAGTAACAAAGTTATTTGGTGGCCATCTTATAAAACAAGTTAGCCTTGGGAATTATGTTGAGGACAAAGTTCCAAGTTTGAAGCATTTCATGATTGAAGGAAATGCAGGCCATGAGCATAGCATACCATCCTTGGCAGCCCTTGCAAGATCGATGCAATTGCTTCAGAGGTATGAGTTCAAAATCAATCACGAAGAATGGGTTAGGACTTGCAATCCTCATTTGGGTCCAGGAATATCAGAACGAGTATTAGAAGCCATGAGGACGACAGATGAGAATATTGATCTGTGTCGTTCCATTAAAATCAAGCTGCGGGAAGCTCTTGCTTCTCTTCTTGAAGATTTTGGGGTCCTTGTAATTCCTACAGTCCCAGGCCCCCCTCCAGAACTAAACACAGACGTCTCGAAGCTACACAACTTTCGTGCGAAAGCTTTCAGCTTGCTTTCCATTGCTGGAGTTTCTGGATTGTGTCAGGTTAGCATACCTCTAGGCTTGTACAATGGCCTTCCGGTATCATTATCTTTGCTAGCAAAACATGGTTCAGATGGATTTTTGCTCAATGTTGTTGATAGTCTTTACAACACTCTAAAACAAGAAGTTGAGGTAAGCTTCTAAGAAATCTAAAAGAAACTACCTTGATGCTTGAAAATTGCTGTCCTATTTTCAGATTGGAAGAATAAGAGCATGTGCAAGCCAGGTATAAGCATTTTGATTAGCTTTTCTTTTTCTAGCGATGAATCAATTTTAAGTTGATTGAATGATGAGATGTTTGATACTCGATCTGTCTCATGTATTGTTCTGTGTATAGCTGTTGATAATGAATCTTTAGAACAATGCTCCACTATTCTTCCATACTTATTTCTGGAGTTTTGAATCACTCGATGAGATATTTATTCATGATTTTTTTGAAATGTTGGTCAAAATCAATGGATATGTTGATTACAAAATTATGAAAATCATAGATATTATTGGAAGGCGGTTAGAAATCACGAACCTTGGCATAATATTGTCCACTTTGAGTATAAACTCTCATC ATGAAGCTCTCATGTATTCCTAGTGAACGATTGACGCAAGTTTTTGTGAATGCAGTAACAAAGTTATTTGGTGGCCATCTTATAAAACAAGTTAGCCTTGGGAATTATGTTGAGGACAAAGTTCCAAGTTTGAAGCATTTCATGATTGAAGGAAATGCAGGCCATGAGCATAGCATACCATCCTTGGCAGCCCTTGCAAGATCGATGCAATTGCTTCAGAGGTATGAGTTCAAAATCAATCACGAAGAATGGGTTAGGACTTGCAATCCTCATTTGGGTCCAGGAATATCAGAACGAGTATTAGAAGCCATGAGGACGACAGATGAGAATATTGATCTGTGTCGTTCCATTAAAATCAAGCTGCGGGAAGCTCTTGCTTCTCTTCTTGAAGATTTTGGGGTCCTTGTAATTCCTACAGTCCCAGGCCCCCCTCCAGAACTAAACACAGACGTCTCGAAGCTACACAACTTTCGTGCGAAAGCTTTCAGCTTGCTTTCCATTGCTGGAGTTTCTGGATTGTGTCAGGTTAGCATACCTCTAGGCTTGTACAATGGCCTTCCGGTATCATTATCTTTGCTAGCAAAACATGGTTCAGATGGATTTTTGCTCAATGTTGTTGATAGTCTTTACAACACTCTAAAACAAGAAGTTGAGGTAAGCTTCTAA MKLSCIPSERLTQVFVNAVTKLFGGHLIKQVSLGNYVEDKVPSLKHFMIEGNAGHEHSIPSLAALARSMQLLQRYEFKINHEEWVRTCNPHLGPGISERVLEAMRTTDENIDLCRSIKIKLREALASLLEDFGVLVIPTVPGPPPELNTDVSKLHNFRAKAFSLLSIAGVSGLCQVSIPLGLYNGLPVSLSLLAKHGSDGFLLNVVDSLYNTLKQEVEVSF Homology
BLAST of Carg27607 vs. NCBI nr
Match: XP_022961591.1 (amidase 1-like [Cucurbita moschata]) HSP 1 Score: 443.4 bits (1139), Expect = 1.2e-120 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of Carg27607 vs. NCBI nr
Match: KAG7023951.1 (Amidase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 443.4 bits (1139), Expect = 1.2e-120 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of Carg27607 vs. NCBI nr
Match: XP_022968726.1 (amidase 1 isoform X4 [Cucurbita maxima]) HSP 1 Score: 441.0 bits (1133), Expect = 5.9e-120 Identity = 219/221 (99.10%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of Carg27607 vs. NCBI nr
Match: XP_022968725.1 (amidase 1 isoform X3 [Cucurbita maxima]) HSP 1 Score: 441.0 bits (1133), Expect = 5.9e-120 Identity = 219/221 (99.10%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of Carg27607 vs. NCBI nr
Match: KAG6590388.1 (Amidase 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 440.3 bits (1131), Expect = 1.0e-119 Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 0
BLAST of Carg27607 vs. ExPASy Swiss-Prot
Match: Q9FR37 (Amidase 1 OS=Arabidopsis thaliana OX=3702 GN=AMI1 PE=1 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 4.3e-65 Identity = 127/211 (60.19%), Postives = 161/211 (76.30%), Query Frame = 0
BLAST of Carg27607 vs. ExPASy Swiss-Prot
Match: Q7XTK3 (Amidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=AMI1 PE=1 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.8e-55 Identity = 104/209 (49.76%), Postives = 152/209 (72.73%), Query Frame = 0
BLAST of Carg27607 vs. ExPASy Swiss-Prot
Match: Q9MUK5 (Translocon at the outer membrane of chloroplasts 64 OS=Pisum sativum OX=3888 GN=TOC64 PE=1 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 5.5e-44 Identity = 89/215 (41.40%), Postives = 140/215 (65.12%), Query Frame = 0
BLAST of Carg27607 vs. ExPASy Swiss-Prot
Match: Q9LVH5 (Outer envelope protein 64, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP64 PE=1 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 3.3e-41 Identity = 88/210 (41.90%), Postives = 129/210 (61.43%), Query Frame = 0
BLAST of Carg27607 vs. ExPASy Swiss-Prot
Match: F4KCL7 (Outer envelope protein 64, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OM64 PE=1 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 2.2e-40 Identity = 90/220 (40.91%), Postives = 136/220 (61.82%), Query Frame = 0
BLAST of Carg27607 vs. ExPASy TrEMBL
Match: A0A6J1HAS6 (amidase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111462124 PE=3 SV=1) HSP 1 Score: 443.4 bits (1139), Expect = 5.7e-121 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of Carg27607 vs. ExPASy TrEMBL
Match: A0A6J1HY10 (amidase 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111467873 PE=3 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 2.9e-120 Identity = 219/221 (99.10%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of Carg27607 vs. ExPASy TrEMBL
Match: A0A6J1HVP2 (amidase 1 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111467873 PE=3 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 2.9e-120 Identity = 219/221 (99.10%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of Carg27607 vs. ExPASy TrEMBL
Match: A0A5D3CG55 (Amidase 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003790 PE=4 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 3.7e-104 Identity = 191/220 (86.82%), Postives = 206/220 (93.64%), Query Frame = 0
BLAST of Carg27607 vs. ExPASy TrEMBL
Match: A0A1S3BPN7 (amidase 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492180 PE=3 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 3.7e-104 Identity = 191/220 (86.82%), Postives = 206/220 (93.64%), Query Frame = 0
BLAST of Carg27607 vs. TAIR 10
Match: AT1G08980.1 (amidase 1 ) HSP 1 Score: 249.2 bits (635), Expect = 3.1e-66 Identity = 127/211 (60.19%), Postives = 161/211 (76.30%), Query Frame = 0
BLAST of Carg27607 vs. TAIR 10
Match: AT3G17970.1 (translocon at the outer membrane of chloroplasts 64-III ) HSP 1 Score: 169.9 bits (429), Expect = 2.4e-42 Identity = 88/210 (41.90%), Postives = 129/210 (61.43%), Query Frame = 0
BLAST of Carg27607 vs. TAIR 10
Match: AT5G09420.1 (translocon at the outer membrane of chloroplasts 64-V ) HSP 1 Score: 167.2 bits (422), Expect = 1.5e-41 Identity = 90/220 (40.91%), Postives = 136/220 (61.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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