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Carg27468 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGCAATTCAAAAATTTATTCAAGTTAGATTTTTTTTTACTCTATTGTTCTCAAGATGTTGATATTTTCATATGAAACGATTTTCACTGTGTTCAGTTTATCTTTGATAGGAAACTGTTGCCGATGGTGCACAGTATACCAATTTCTGCTCAGCTGAAGTACAATATTGATGTTGTTTGCGAGTATATAGTGAAAAAGATTCAAATTCCTGAAAGGAATTTTGTCTCTCCGCCTAATATGATTGTGATTCGATCTTTTGATGTTAACAAACCTGGATTTGAGTTTGACGAGATCAAAGTTGGTGTGGCTGGTGGTAGCATATTACGGGTATATACTTGTTACTTTTTTCTGAAAAAGATAATCATCAGTTTTGTTTAAATTGTGTGCTATGGATAACCTGAGCAGCTTTCAGGATGTATGAAATACTTAAGGCAGCATCCTATGCTTATGTGAAAAGAGGGTTTTGACTTTGCATGTAGGTGAATATTGGTTAAATAGTAGAGTTTACGTCGCAGTTGTGACTTTAATACAAGTTCTCGGATGTCGGTTTGAGTTATTAGGATACTAGTTTCGATAAAAATCGTAATAAGTAGTAAAACAAAATTTTATCTAAGTTTAGTTTGTGGTTTGGATGTTTTAACCTCCTGAATTTTGCAGTTGAACCTGTTTTGAATTAATTTTTGTAAGAAATTCATGTCATCACTTAACATTTTCTTAACCCATATTTTACCTTGGAAAATTGATCCACAGTTTTGGTTGGTATGCATTATACATGGCTAACAAATTGAAAATATTGTCTTACCAGGGTGTTTAAAGGTGAATCAATTTATTGAAGTTCGTCCGGGGTTGTGGTTAAGGATGAAAGTGGTAACATCAAGTGCACCCCCAATATACTCGAGGATTGTTTCTTTGTATGCCGAGCAAAATGAGCTGCAATTTTGCAGTCCCTGGAGGTCTTATTGGAGTTGGCACAACCATGGATCCCACTTTGACTCGTGCTGACAGATTGGTCGGTCAGGTTCTTGGAGAAGTCGATCACTTCCTGATGTTTTTGTTGAGCTAGAGGTAAAGCTCTTAAATTGATTTGAATGTTTATTTATTTCATGGATGAAATACCTTTAGTCCAACCCAGGACTACTTCTAAGATTCTTTAGAGCCCTCAGCTTCTTTCTGGATTGTGTTTTTTTTTCACCTTTTGATTATAAGGGCTAAATCTTATGGCACGCTGCCTTCTTACAGTTCTGTGTAGAATTTTATAGTGGTTTTGAGAGAACTTCGACAAGAGGTTTGATCCTGTGTAATGCTTCTCTTTAGGCAATGGCCTCCCATCATTTTTTTAATTATTTGTTGGGTCTTATTATCTTGGGTTAGAGCTCTTTTTTTGTATAGCTAATTTAGTTGTGTATATTTGTATTATTTCATTTTACTCTATAAAAACTCAGTTTTCGGTAAGAATAAATTTCATCCTCAGTTTCTCGAAGTTCCTCTGTTGCTCTGATTTGCTGGTTTGGACATTGTAATGAGAACTGTTAACGAATTGGTCTCAAAGAGCTGGAGGGCAATTGTCCTTACAAATTGCCTGTTTTGAGATTTGTCCTCCTTGTCTTTGTAGGTGAACTTTTTCCTTCTGCGGCGGCTCCTAGGTGTCAGGACGAAAGGATCAGAAAGGCAGGGAAAAGTATCAAAATTGGCTAAGGGAGAGATTCTAATGTTGAACATAGGATCCATGTCTACAGGAGCTAGAGTACTTGCAGTTAAGAATGATTTAGCAAAGTTGCAGCTTACCTCTCCTGTTTGCACCAGCAAGGGGGAGAAGATTGCTCTAAGTCGTCGAGTCGAGAAGCACTGGCGTCTTATTGGCTGGGGTCAAATTCAAGCTGGAATGACCCTTGACGTTCCCCCTTGCCCCATTTGA ATGAAGGCAATTCAAAAATTTATTCAATTTATCTTTGATAGGAAACTGTTGCCGATGGTGCACAGTATACCAATTTCTGCTCAGCTGAAGTACAATATTGATGTTGTTTGCGAGTATATAGTGAAAAAGATTCAAATTCCTGAAAGGAATTTTGTCTCTCCGCCTAATATGATTGTGATTCGATCTTTTGATGTTAACAAACCTGGATTTGAGTTTGACGAGATCAAAGTTGGTGTGGCTGGTGGTAGCATATTACGGGTGAATCAATTTATTGAAGTTCGTCCGGGGTTGTGGTTAAGGATGAAAGTGGTAACATCAATCCCTGGAGGTCTTATTGGAGTTGGCACAACCATGGATCCCACTTTGACTCGTGCTGACAGATTGGTCGGTCAGGTGAACTTTTTCCTTCTGCGGCGGCTCCTAGGTGTCAGGACGAAAGGATCAGAAAGGCAGGGAAAAGTATCAAAATTGGCTAAGGGAGAGATTCTAATGTTGAACATAGGATCCATGTCTACAGGAGCTAGAGTACTTGCAGTTAAGAATGATTTAGCAAAGTTGCAGCTTACCTCTCCTGTTTGCACCAGCAAGGGGGAGAAGATTGCTCTAAGTCGTCGAGTCGAGAAGCACTGGCGTCTTATTGGCTGGGGTCAAATTCAAGCTGGAATGACCCTTGACGTTCCCCCTTGCCCCATTTGA ATGAAGGCAATTCAAAAATTTATTCAATTTATCTTTGATAGGAAACTGTTGCCGATGGTGCACAGTATACCAATTTCTGCTCAGCTGAAGTACAATATTGATGTTGTTTGCGAGTATATAGTGAAAAAGATTCAAATTCCTGAAAGGAATTTTGTCTCTCCGCCTAATATGATTGTGATTCGATCTTTTGATGTTAACAAACCTGGATTTGAGTTTGACGAGATCAAAGTTGGTGTGGCTGGTGGTAGCATATTACGGGTGAATCAATTTATTGAAGTTCGTCCGGGGTTGTGGTTAAGGATGAAAGTGGTAACATCAATCCCTGGAGGTCTTATTGGAGTTGGCACAACCATGGATCCCACTTTGACTCGTGCTGACAGATTGGTCGGTCAGGTGAACTTTTTCCTTCTGCGGCGGCTCCTAGGTGTCAGGACGAAAGGATCAGAAAGGCAGGGAAAAGTATCAAAATTGGCTAAGGGAGAGATTCTAATGTTGAACATAGGATCCATGTCTACAGGAGCTAGAGTACTTGCAGTTAAGAATGATTTAGCAAAGTTGCAGCTTACCTCTCCTGTTTGCACCAGCAAGGGGGAGAAGATTGCTCTAAGTCGTCGAGTCGAGAAGCACTGGCGTCTTATTGGCTGGGGTCAAATTCAAGCTGGAATGACCCTTGACGTTCCCCCTTGCCCCATTTGA MKAIQKFIQFIFDRKLLPMVHSIPISAQLKYNIDVVCEYIVKKIQIPERNFVSPPNMIVIRSFDVNKPGFEFDEIKVGVAGGSILRVNQFIEVRPGLWLRMKVVTSIPGGLIGVGTTMDPTLTRADRLVGQVNFFLLRRLLGVRTKGSERQGKVSKLAKGEILMLNIGSMSTGARVLAVKNDLAKLQLTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGMTLDVPPCPI Homology
BLAST of Carg27468 vs. NCBI nr
Match: KAG7030543.1 (Eukaryotic translation initiation factor 2 subunit 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 458.8 bits (1179), Expect = 2.9e-125 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0
BLAST of Carg27468 vs. NCBI nr
Match: KAG6599860.1 (Eukaryotic translation initiation factor 2 subunit 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 362.1 bits (928), Expect = 3.6e-96 Identity = 201/272 (73.90%), Postives = 213/272 (78.31%), Query Frame = 0
BLAST of Carg27468 vs. NCBI nr
Match: TYI95864.1 (hypothetical protein E1A91_D01G028800v1 [Gossypium mustelinum]) HSP 1 Score: 361.7 bits (927), Expect = 4.7e-96 Identity = 196/268 (73.13%), Postives = 212/268 (79.10%), Query Frame = 0
BLAST of Carg27468 vs. NCBI nr
Match: XP_008460222.1 (PREDICTED: eukaryotic translation initiation factor 2 subunit gamma-like [Cucumis melo] >XP_008460223.1 PREDICTED: eukaryotic translation initiation factor 2 subunit gamma-like [Cucumis melo] >XP_008460224.1 PREDICTED: eukaryotic translation initiation factor 2 subunit gamma-like [Cucumis melo] >KAA0035997.1 eukaryotic translation initiation factor 2 subunit gamma-like [Cucumis melo var. makuwa] >TYK30408.1 eukaryotic translation initiation factor 2 subunit gamma-like [Cucumis melo var. makuwa]) HSP 1 Score: 360.9 bits (925), Expect = 8.1e-96 Identity = 201/272 (73.90%), Postives = 212/272 (77.94%), Query Frame = 0
BLAST of Carg27468 vs. NCBI nr
Match: XP_022941895.1 (eukaryotic translation initiation factor 2 subunit 3-like [Cucurbita moschata] >XP_022941896.1 eukaryotic translation initiation factor 2 subunit 3-like [Cucurbita moschata] >XP_022941897.1 eukaryotic translation initiation factor 2 subunit 3-like [Cucurbita moschata] >XP_022941898.1 eukaryotic translation initiation factor 2 subunit 3-like [Cucurbita moschata] >XP_022941899.1 eukaryotic translation initiation factor 2 subunit 3-like [Cucurbita moschata] >XP_022974664.1 eukaryotic translation initiation factor 2 subunit 3-like [Cucurbita maxima] >XP_022974699.1 eukaryotic translation initiation factor 2 subunit 3-like [Cucurbita maxima] >XP_022974741.1 eukaryotic translation initiation factor 2 subunit 3-like [Cucurbita maxima] >XP_022974790.1 eukaryotic translation initiation factor 2 subunit 3-like [Cucurbita maxima] >XP_022974842.1 eukaryotic translation initiation factor 2 subunit 3-like [Cucurbita maxima] >XP_022974904.1 eukaryotic translation initiation factor 2 subunit 3-like [Cucurbita maxima] >XP_023543572.1 eukaryotic translation initiation factor 2 subunit 3-like [Cucurbita pepo subsp. pepo] >XP_023543582.1 eukaryotic translation initiation factor 2 subunit 3-like [Cucurbita pepo subsp. pepo] >XP_023543591.1 eukaryotic translation initiation factor 2 subunit 3-like [Cucurbita pepo subsp. pepo] >XP_023543599.1 eukaryotic translation initiation factor 2 subunit 3-like [Cucurbita pepo subsp. pepo] >KAG7031437.1 Eukaryotic translation initiation factor 2 subunit 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 360.9 bits (925), Expect = 8.1e-96 Identity = 201/272 (73.90%), Postives = 212/272 (77.94%), Query Frame = 0
BLAST of Carg27468 vs. ExPASy Swiss-Prot
Match: Q2KHU8 (Eukaryotic translation initiation factor 2 subunit 3 OS=Bos taurus OX=9913 GN=EIF2S3 PE=2 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 1.4e-69 Identity = 145/244 (59.43%), Postives = 173/244 (70.90%), Query Frame = 0
BLAST of Carg27468 vs. ExPASy Swiss-Prot
Match: P41091 (Eukaryotic translation initiation factor 2 subunit 3 OS=Homo sapiens OX=9606 GN=EIF2S3 PE=1 SV=3) HSP 1 Score: 264.2 bits (674), Expect = 1.4e-69 Identity = 145/244 (59.43%), Postives = 173/244 (70.90%), Query Frame = 0
BLAST of Carg27468 vs. ExPASy Swiss-Prot
Match: Q9Z0N1 (Eukaryotic translation initiation factor 2 subunit 3, X-linked OS=Mus musculus OX=10090 GN=Eif2s3x PE=1 SV=2) HSP 1 Score: 264.2 bits (674), Expect = 1.4e-69 Identity = 145/244 (59.43%), Postives = 173/244 (70.90%), Query Frame = 0
BLAST of Carg27468 vs. ExPASy Swiss-Prot
Match: P81795 (Eukaryotic translation initiation factor 2 subunit 3, X-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3 PE=1 SV=2) HSP 1 Score: 264.2 bits (674), Expect = 1.4e-69 Identity = 145/244 (59.43%), Postives = 173/244 (70.90%), Query Frame = 0
BLAST of Carg27468 vs. ExPASy Swiss-Prot
Match: Q9Z0N2 (Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Mus musculus OX=10090 GN=Eif2s3y PE=1 SV=2) HSP 1 Score: 263.5 bits (672), Expect = 2.3e-69 Identity = 145/244 (59.43%), Postives = 173/244 (70.90%), Query Frame = 0
BLAST of Carg27468 vs. ExPASy TrEMBL
Match: A0A5D2W239 (Tr-type G domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D01G028800v1 PE=4 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 2.3e-96 Identity = 196/268 (73.13%), Postives = 212/268 (79.10%), Query Frame = 0
BLAST of Carg27468 vs. ExPASy TrEMBL
Match: A0A6J1JLA1 (Protein-synthesizing GTPase OS=Cucurbita maxima OX=3661 GN=LOC111485443 PE=4 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 3.9e-96 Identity = 201/272 (73.90%), Postives = 212/272 (77.94%), Query Frame = 0
BLAST of Carg27468 vs. ExPASy TrEMBL
Match: A0A6J1IID6 (Protein-synthesizing GTPase OS=Cucurbita maxima OX=3661 GN=LOC111473313 PE=4 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 3.9e-96 Identity = 201/272 (73.90%), Postives = 212/272 (77.94%), Query Frame = 0
BLAST of Carg27468 vs. ExPASy TrEMBL
Match: A0A1S3CC41 (Protein-synthesizing GTPase OS=Cucumis melo OX=3656 GN=LOC103499107 PE=4 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 3.9e-96 Identity = 201/272 (73.90%), Postives = 212/272 (77.94%), Query Frame = 0
BLAST of Carg27468 vs. ExPASy TrEMBL
Match: A0A6J1FVQ5 (Protein-synthesizing GTPase OS=Cucurbita moschata OX=3662 GN=LOC111447300 PE=4 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 3.9e-96 Identity = 201/272 (73.90%), Postives = 212/272 (77.94%), Query Frame = 0
BLAST of Carg27468 vs. TAIR 10
Match: AT1G04170.1 (eukaryotic translation initiation factor 2 gamma subunit ) HSP 1 Score: 335.9 bits (860), Expect = 2.6e-92 Identity = 183/271 (67.53%), Postives = 204/271 (75.28%), Query Frame = 0
BLAST of Carg27468 vs. TAIR 10
Match: AT4G18330.2 (Translation elongation factor EF1A/initiation factor IF2gamma family protein ) HSP 1 Score: 277.7 bits (709), Expect = 8.4e-75 Identity = 162/271 (59.78%), Postives = 191/271 (70.48%), Query Frame = 0
BLAST of Carg27468 vs. TAIR 10
Match: AT2G18720.1 (Translation elongation factor EF1A/initiation factor IF2gamma family protein ) HSP 1 Score: 267.3 bits (682), Expect = 1.1e-71 Identity = 143/250 (57.20%), Postives = 176/250 (70.40%), Query Frame = 0
BLAST of Carg27468 vs. TAIR 10
Match: AT4G18330.1 (Translation elongation factor EF1A/initiation factor IF2gamma family protein ) HSP 1 Score: 100.9 bits (250), Expect = 1.4e-21 Identity = 58/85 (68.24%), Postives = 66/85 (77.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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