Carg27457 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27457
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Rieske domain-containing protein
Location	Carg_Chr09: 11872967 .. 11876822 (+)
RNA-Seq Expression	Carg27457
Synteny	Carg27457

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTCAGATCACCGGCGCTCCATTTTCATTGACCCTTTCCTGTTATCCATTTCATGTGGTCTATGGCAAATCCTCCATTTTCTCTCTCTAAATCCCTCTCTCTCTCTCCTCCCCTGCTTCTTCTCTCACTGTCATTCACCCCCTCCATTCCCCTTCCACTTCCACCTCCCAATGGCCGTCAATTCCACTAACCTCACTTCCCATTTTGCCCTCCCTTTCCGCCGGAACCATCCGATCTCCTCCCCATGCACCGCCGCCCTTCCCATTCTCAAACCCGCCCTTCGCCGTTCCCTTTTCGCCTCTCCTCCTTCCGGTCCCCGGAAAATCTTGTGCAAAGCGTCGGAGGTCTCGGTGGCTGAGGAATCGTCGGCGTCTGGTAACTGGGTGCCCGTGGTTCCGTTGTCGGCGCTGCCGAAAGGGGAGCGGCGCGTGATTATTCAGGGTGGGGAGACGGTTTTGCTTCTTTGGTATAAGGAGAGGATTTTTGCTATTGAGAATCGTTCCCCTGCTGAAGGTGCTTACACTGAAGGTCTCCTTAATGCCAAACTCACTAAGGTTCATTTCATTTCCTCTGTTTCTTCTTTTCTTGCGACTGTCAAAGAATTGTAGAATTATCTGAATTCTGCCCTTGTTTCATATGATTCATAGAGAATAACAGTGATGATTGCCCAATTGGGGAGGACATATTTTCCTGATTTAGAGAAGATTAGGTTCGTTATTGCATCAAGGACGGTTAGGAATCACGAATCTTCACGATAGTATGATATTGTCCACTTTGAGTATAAGCTCTCACGGCTTTGCTTGTGATATTCCCAAAGGGTCTCGTACCAATGGAGATGTATTTCTTACTTATAAACCTATGATCGTTTTCTTAATTAGTTAACGTGGGACTCCCTCCCAACCATCCTCCTCTCAAACAAAGTATACCATAGAGCTTTCCCTGAGGTCTATGGTGTCCTTGAACAGTCTCCCCTTAATTGAGGCTCGACTCCTTTCTCTGGAGCACTCAAACAAAGTACACCATTTGTTCGACACTTGAGTCACTTTTGACTACACTTTCGAGTGTCCCAATTTCTTTGTTCGGTATTTGAGGATTCTGTTGACATGGCTAAGTTAAGGGCATGGCTCTCATACCATGTTAGGAATCACGAATCTTCATAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGTTTTGCTTTTGGTTTCCCCAAAAGGCCTTATACGAAGGGAGATGTATTCCCTACTTATAAACCCATGATCATTCCCTTAATTAGCCAATGTGGGAGCCCTCGAACGAAGTACACTATTTATTCGACACTTGAGTCACTTTTGACTATACTTTCGAGGGTCCCAATTTCTTTGTTTGACATTTGAGGATTCTATTGACATGGCTAAGTTAAGGGCATGACTCCGATGCCATGTTAGGAATCACGAATCTCCACGGTGATATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCATTTGGTTTTCCCAAAGGGCCTCATGCCAATGGAGATGTATTCCTTACTTATAAACCCATGATCGTTCCATTAATTAGCCGATCATTCCCTTAATTAGCCAATGTGGAACTCCCTCCTAACCATCCTCAATATGAATATGACAATCGATTCCTTTTCTTTCTTTACAATGGTACGATAGAGTCAATTGGGTCAAGCTCGATTTCACCTAAACACCAAATAGAATGGAAATGTTCAACTCCTTACGGCTGGATAGATAAAACTTTGGTTCTTACTCATTCAAATTGACTGTTGGGCTTCAATGTTCTTCATATTTATCAGCATTTCAGTTTTTGAAACTAGAATAAGTTCTAATGCTTGCAATGTAGAACACTTCATTGAATGACCATACCTGTTCTCTACTCAGGATGGCTGTATTGTCTGTCCAACGACAGATAGCACATTTGACCTCCAAACTGGAGACATCAAGGAATGGTATCCAAACAATCCTGTCCTCAGAGTCCTCACACCAGCCTTAAGGAAGCTTTTTGTATACCCTGTAAAAACTGATGAAAACAACATTTATATCAACATGAGGGGAAACGTGATATCAGATTCGTCTGCTGAAATTGTCTTTAGTGGTAAAGCTCAACCCGGTGTAACTGCTACCGATGTCAATGTCGACGAGGTAACTATGGAATTGTTTAGTCGAACGTATTCTATTTTTTTGCCGATAGTTTTCTTCCGTTCTTGAACTTATACCTTGTGTTATGTTCATGTCGACGAGGTAACTATGGAATTGTTTAGTCGAATGTATTCTATTTTTTCGCCAATAGTTTTCTTCCGTTCTTGAACTTCTACCCTCGTGTTATGTCCATGTCGACGAGGTAACTATGAAATGGTTTAGTCAAACGCATTCTGTTTTTTTGCCGATAGTTTTCTTCCGTTCTTGAACTTCTACCTTGTGTTATGTTCATGTCGACGAGGTAACTATGGAATTGTTTAGTCGAATGTATTCTATTTTTTTGCCGATAGTTTTCTTCCGTTCTTGAACTTCTACCTTGTGTTATGGTCATGTCGACGAGGTAACTATGGAATTGTTTAGTCAAATGTATTCTATTTTTTCGCCAATAGTTTTCTTCCGTTCTTGAACTTCTACCCTCGTGTTATGTCCATGTCGACGAGGTAACTATGAAATGGTTTAGTCCAACGCATTCTGTTTTTTTGCCGATAGTTTTCTTCCGTTCTTGAACTTCTACCTTGTGTTATGTTCATGTCGACGAGGTAACTATGGAATTGTTTAGTCAAATGTATTCTATTTTTTTGAATGTAACTTCTACCCTTTTTTATGAATGGTTTAGTCCAACGCATTCTGTTTTTTTTTTGCCGATGTTCCGTTCTTGATGTAATGTTCTACGAGGTAACTATGGAATTGTTTAGTCGAATGTATTCTATTTTTTTGCCGATAGTTTTCTTCCGTTCTTGAACTTCTACCTTGTGTTATGTTCATGTCGACGAGGTAACTATGGAATTGTTTAGTCGAATGTATTCTATTTTTTTGCCGATAGTTTTCTTCCGTTCTTGAACTTCTACCTTGTGTTATGTTCATGTCGACGAGGTAACTATGGAATTGTTTAGTCAAATGTATTCTATTTTTTCGCCGATAGTTTTCTTCCATTCTTGAACTTCTACCCTCGTGTTATGTTCATGTCGACGAGGTAACTATGGAATTGTTTAGTTGAACGTATTCTGTTTTTTTTGCCGATAGTTTTCTTCAGTTCTTGAACTTCTACCTTATGTTATGTTCATGTCGACAAGGTAACTATGGAATTGTTTAGTCGAGGTAACTATGAAATTATTTAGTCGAACGTATTTTGTTCTTTTGCCGATAGTTTTATTCGGTTCTTGAACTTCTACCTTGTGTTAATTCGACGAGATAACTATGGAATTGTTTAGTCGAACGTATTTTGTTTTTTCGCTAATAATTTTCTTCCGTTCTTGAACTTCTACCTTGTGTTATGTTCATATCGATAAGGTAACTATGAAATTGGTATTCTGTTTTTTTGCAGTTTTCTTCCGTTCTTGAACTTCTACCTTACGTTATGCTCATGTTGACGAGATAACTATGGAATTGTTTAGTCGAACGTATTCTATTTTTTTTTTTCTTGAACTCCTTGTGTTATGTTGAAGGTGAAAATGGTGGTCGATGAAGGAACTTGAAGGGTTTGGCTTCACTGGAAAGAATGAAGTGATAAATGGAAAGGCAGCAGTGATTGGGTTCTTGTTGTTGTTGGATTTTGAGCTCTTAACTGGGAAGGGTCTTCTCAAGGGAACTGGATTCTTGGACTTCATTTATTCTGCTTCAGATGCCTTCAAATAG

mRNA sequence

TATTCAGATCACCGGCGCTCCATTTTCATTGACCCTTTCCTGTTATCCATTTCATGTGGTCTATGGCAAATCCTCCATTTTCTCTCTCTAAATCCCTCTCTCTCTCTCCTCCCCTGCTTCTTCTCTCACTGTCATTCACCCCCTCCATTCCCCTTCCACTTCCACCTCCCAATGGCCGTCAATTCCACTAACCTCACTTCCCATTTTGCCCTCCCTTTCCGCCGGAACCATCCGATCTCCTCCCCATGCACCGCCGCCCTTCCCATTCTCAAACCCGCCCTTCGCCGTTCCCTTTTCGCCTCTCCTCCTTCCGGTCCCCGGAAAATCTTGTGCAAAGCGTCGGAGGTCTCGGTGGCTGAGGAATCGTCGGCGTCTGGTAACTGGGTGCCCGTGGTTCCGTTGTCGGCGCTGCCGAAAGGGGAGCGGCGCGTGATTATTCAGGGTGGGGAGACGGTTTTGCTTCTTTGGTATAAGGAGAGGATTTTTGCTATTGAGAATCGTTCCCCTGCTGAAGGTGCTTACACTGAAGGTCTCCTTAATGCCAAACTCACTAAGGATGGCTGTATTGTCTGTCCAACGACAGATAGCACATTTGACCTCCAAACTGGAGACATCAAGGAATGGTATCCAAACAATCCTGTCCTCAGAGTCCTCACACCAGCCTTAAGGAAGCTTTTTGTATACCCTGTAAAAACTGATGAAAACAACATTTATATCAACATGAGGGGAAACGTGATATCAGATTCGTCTGCTGAAATTGTCTTTAGTGGTAAAGCTCAACCCGGTGTAACTGCTACCGATGTCAATGTCGACGAGGAACTTGAAGGGTTTGGCTTCACTGGAAAGAATGAAGTGATAAATGGAAAGGCAGCAGTGATTGGGTTCTTGTTGTTGTTGGATTTTGAGCTCTTAACTGGGAAGGGTCTTCTCAAGGGAACTGGATTCTTGGACTTCATTTATTCTGCTTCAGATGCCTTCAAATAG

Coding sequence (CDS)

ATGGCCGTCAATTCCACTAACCTCACTTCCCATTTTGCCCTCCCTTTCCGCCGGAACCATCCGATCTCCTCCCCATGCACCGCCGCCCTTCCCATTCTCAAACCCGCCCTTCGCCGTTCCCTTTTCGCCTCTCCTCCTTCCGGTCCCCGGAAAATCTTGTGCAAAGCGTCGGAGGTCTCGGTGGCTGAGGAATCGTCGGCGTCTGGTAACTGGGTGCCCGTGGTTCCGTTGTCGGCGCTGCCGAAAGGGGAGCGGCGCGTGATTATTCAGGGTGGGGAGACGGTTTTGCTTCTTTGGTATAAGGAGAGGATTTTTGCTATTGAGAATCGTTCCCCTGCTGAAGGTGCTTACACTGAAGGTCTCCTTAATGCCAAACTCACTAAGGATGGCTGTATTGTCTGTCCAACGACAGATAGCACATTTGACCTCCAAACTGGAGACATCAAGGAATGGTATCCAAACAATCCTGTCCTCAGAGTCCTCACACCAGCCTTAAGGAAGCTTTTTGTATACCCTGTAAAAACTGATGAAAACAACATTTATATCAACATGAGGGGAAACGTGATATCAGATTCGTCTGCTGAAATTGTCTTTAGTGGTAAAGCTCAACCCGGTGTAACTGCTACCGATGTCAATGTCGACGAGGAACTTGAAGGGTTTGGCTTCACTGGAAAGAATGAAGTGATAAATGGAAAGGCAGCAGTGATTGGGTTCTTGTTGTTGTTGGATTTTGAGCTCTTAACTGGGAAGGGTCTTCTCAAGGGAACTGGATTCTTGGACTTCATTTATTCTGCTTCAGATGCCTTCAAATAG

Protein sequence

MAVNSTNLTSHFALPFRRNHPISSPCTAALPILKPALRRSLFASPPSGPRKILCKASEVSVAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENRSPAEGAYTEGLLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNIYINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEELEGFGFTGKNEVINGKAAVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK

Homology

[Close]

BLAST of Carg27457 vs. NCBI nr
Match: KAG7025185.1 (hypothetical protein SDJN02_14008 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 540.0 bits (1390), Expect = 1.1e-149
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MAVNSTNLTSHFALPFRRNHPISSPCTAALPILKPALRRSLFASPPSGPRKILCKASEVS 60
           MAVNSTNLTSHFALPFRRNHPISSPCTAALPILKPALRRSLFASPPSGPRKILCKASEVS
Sbjct: 1   MAVNSTNLTSHFALPFRRNHPISSPCTAALPILKPALRRSLFASPPSGPRKILCKASEVS 60

Query: 61  VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENRSPAEGAYTEG 120
           VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENRSPAEGAYTEG
Sbjct: 61  VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENRSPAEGAYTEG 120

Query: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI 180
           LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI
Sbjct: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI 180

Query: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEELEGFGFTGKNEVINGKAAVIGFLL 240
           YINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEELEGFGFTGKNEVINGKAAVIGFLL
Sbjct: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEELEGFGFTGKNEVINGKAAVIGFLL 240

Query: 241 LLDFELLTGKGLLKGTGFLDFIYSASDAFK 271
           LLDFELLTGKGLLKGTGFLDFIYSASDAFK
Sbjct: 241 LLDFELLTGKGLLKGTGFLDFIYSASDAFK 270

[Close]

BLAST of Carg27457 vs. NCBI nr
Match: KAG6592369.1 (hypothetical protein SDJN03_14715, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 533.1 bits (1372), Expect = 1.4e-147
Identity = 270/277 (97.47%), Postives = 270/277 (97.47%), Query Frame = 0


Query: 1   MAVNSTNLTSHFALPFRRNHPISSPCTAALPILKPALRRSLFASPPSGPRKILCKASEVS 60
           MAVNSTNLTSHFALPFRRNHPISSPCTAALPILKPALRRSLFASPPSGPRKILCKASEVS
Sbjct: 1   MAVNSTNLTSHFALPFRRNHPISSPCTAALPILKPALRRSLFASPPSGPRKILCKASEVS 60

Query: 61  VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENRSPAEGAYTEG 120
           VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENRSPAEGAYTEG
Sbjct: 61  VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENRSPAEGAYTEG 120

Query: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI 180
           LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI
Sbjct: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI 180

Query: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVN-------VDEELEGFGFTGKNEVINGKA 240
           YINMRGNVISDSSAEIVFSGKAQPGVTATDVN       VDEELEGFGFTGKNEVINGKA
Sbjct: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEVKMVVDEELEGFGFTGKNEVINGKA 240

Query: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 271
           AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK
Sbjct: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 277

[Close]

BLAST of Carg27457 vs. NCBI nr
Match: XP_022925511.1 (uncharacterized protein LOC111432790 [Cucurbita moschata] >XP_022925512.1 uncharacterized protein LOC111432790 [Cucurbita moschata])

HSP 1 Score: 530.4 bits (1365), Expect = 9.0e-147
Identity = 269/277 (97.11%), Postives = 269/277 (97.11%), Query Frame = 0


Query: 1   MAVNSTNLTSHFALPFRRNHPISSPCTAALPILKPALRRSLFASPPSGPRKILCKASEVS 60
           MAVNSTNLTSHFA PFRRNHPISSPCTAALPILKPALRRSLFASPPSGPRKILCKASEVS
Sbjct: 1   MAVNSTNLTSHFAHPFRRNHPISSPCTAALPILKPALRRSLFASPPSGPRKILCKASEVS 60

Query: 61  VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENRSPAEGAYTEG 120
           VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENRSPAEGAYTEG
Sbjct: 61  VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENRSPAEGAYTEG 120

Query: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI 180
           LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI
Sbjct: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI 180

Query: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVN-------VDEELEGFGFTGKNEVINGKA 240
           YINMRGNVISDSSAEIVFSGKAQPGVTATDVN       VDEELEGFGFTGKNEVINGKA
Sbjct: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEVKMVVDEELEGFGFTGKNEVINGKA 240

Query: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 271
           AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK
Sbjct: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 277

[Close]

BLAST of Carg27457 vs. NCBI nr
Match: XP_022973986.1 (uncharacterized protein LOC111472599 [Cucurbita maxima])

HSP 1 Score: 528.1 bits (1359), Expect = 4.5e-146
Identity = 267/277 (96.39%), Postives = 268/277 (96.75%), Query Frame = 0


Query: 1   MAVNSTNLTSHFALPFRRNHPISSPCTAALPILKPALRRSLFASPPSGPRKILCKASEVS 60
           MAVNSTNLTSHFALPFRR HPISSPCTAALPILKP LRRSLFASPPSGPRKILCKASEVS
Sbjct: 1   MAVNSTNLTSHFALPFRRTHPISSPCTAALPILKPGLRRSLFASPPSGPRKILCKASEVS 60

Query: 61  VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENRSPAEGAYTEG 120
           VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKE+IFAIENRSPAEGAYTEG
Sbjct: 61  VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKEKIFAIENRSPAEGAYTEG 120

Query: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI 180
           LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI
Sbjct: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI 180

Query: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVN-------VDEELEGFGFTGKNEVINGKA 240
           YINMRGNVISDSSAEIVFSGKAQPGVTATDVN       VDEELEGFGFTGKNEVINGKA
Sbjct: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEVKMVVDEELEGFGFTGKNEVINGKA 240

Query: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 271
           AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK
Sbjct: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 277

[Close]

BLAST of Carg27457 vs. NCBI nr
Match: XP_023535514.1 (uncharacterized protein LOC111796930 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 525.4 bits (1352), Expect = 2.9e-145
Identity = 265/277 (95.67%), Postives = 269/277 (97.11%), Query Frame = 0


Query: 1   MAVNSTNLTSHFALPFRRNHPISSPCTAALPILKPALRRSLFASPPSGPRKILCKASEVS 60
           MAVNSTNLTSHFALPFRRNHPISSPCTAALPILKPALRRSLFASPPSGPRKILCKASEVS
Sbjct: 1   MAVNSTNLTSHFALPFRRNHPISSPCTAALPILKPALRRSLFASPPSGPRKILCKASEVS 60

Query: 61  VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENRSPAEGAYTEG 120
           VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENRSPAEGAYTEG
Sbjct: 61  VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENRSPAEGAYTEG 120

Query: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI 180
           LLNAKLTKDGCIVCPTTDSTFDLQTG+IKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI
Sbjct: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGEIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI 180

Query: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVN-------VDEELEGFGFTGKNEVINGKA 240
           YINMRGNVISD+SAEIVFSGKAQPGVTATDVN       VDE+L GFGFTGKNE+INGKA
Sbjct: 181 YINMRGNVISDASAEIVFSGKAQPGVTATDVNVDEVRMVVDEDLGGFGFTGKNELINGKA 240

Query: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 271
           AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK
Sbjct: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 277

[Close]

BLAST of Carg27457 vs. ExPASy TrEMBL
Match: A0A6J1ECE7 (uncharacterized protein LOC111432790 OS=Cucurbita moschata OX=3662 GN=LOC111432790 PE=4 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 4.4e-147
Identity = 269/277 (97.11%), Postives = 269/277 (97.11%), Query Frame = 0


Query: 1   MAVNSTNLTSHFALPFRRNHPISSPCTAALPILKPALRRSLFASPPSGPRKILCKASEVS 60
           MAVNSTNLTSHFA PFRRNHPISSPCTAALPILKPALRRSLFASPPSGPRKILCKASEVS
Sbjct: 1   MAVNSTNLTSHFAHPFRRNHPISSPCTAALPILKPALRRSLFASPPSGPRKILCKASEVS 60

Query: 61  VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENRSPAEGAYTEG 120
           VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENRSPAEGAYTEG
Sbjct: 61  VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENRSPAEGAYTEG 120

Query: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI 180
           LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI
Sbjct: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI 180

Query: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVN-------VDEELEGFGFTGKNEVINGKA 240
           YINMRGNVISDSSAEIVFSGKAQPGVTATDVN       VDEELEGFGFTGKNEVINGKA
Sbjct: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEVKMVVDEELEGFGFTGKNEVINGKA 240

Query: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 271
           AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK
Sbjct: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 277

[Close]

BLAST of Carg27457 vs. ExPASy TrEMBL
Match: A0A6J1IA65 (uncharacterized protein LOC111472599 OS=Cucurbita maxima OX=3661 GN=LOC111472599 PE=4 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.2e-146
Identity = 267/277 (96.39%), Postives = 268/277 (96.75%), Query Frame = 0


Query: 1   MAVNSTNLTSHFALPFRRNHPISSPCTAALPILKPALRRSLFASPPSGPRKILCKASEVS 60
           MAVNSTNLTSHFALPFRR HPISSPCTAALPILKP LRRSLFASPPSGPRKILCKASEVS
Sbjct: 1   MAVNSTNLTSHFALPFRRTHPISSPCTAALPILKPGLRRSLFASPPSGPRKILCKASEVS 60

Query: 61  VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENRSPAEGAYTEG 120
           VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKE+IFAIENRSPAEGAYTEG
Sbjct: 61  VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKEKIFAIENRSPAEGAYTEG 120

Query: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI 180
           LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI
Sbjct: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI 180

Query: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVN-------VDEELEGFGFTGKNEVINGKA 240
           YINMRGNVISDSSAEIVFSGKAQPGVTATDVN       VDEELEGFGFTGKNEVINGKA
Sbjct: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEVKMVVDEELEGFGFTGKNEVINGKA 240

Query: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 271
           AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK
Sbjct: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 277

[Close]

BLAST of Carg27457 vs. ExPASy TrEMBL
Match: A0A5D3BMM3 (Rieske domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00510 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.7e-135
Identity = 247/277 (89.17%), Postives = 257/277 (92.78%), Query Frame = 0


Query: 1   MAVNSTNLTSHFALPFRRNHPISSPCTAALPILKPALRRSLFASPPSGPRKILCKASEVS 60
           MA+NSTN TSHF   FRR HPIS+PCTAALP+LKPAL RSL ASP    RKI CKASE+S
Sbjct: 1   MALNSTNFTSHFPSTFRRIHPISAPCTAALPLLKPALHRSLLASPLPPARKISCKASEIS 60

Query: 61  VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENRSPAEGAYTEG 120
           VAEESSASGNWVPVVPLSALP+GERRVIIQGGET+LLLWYK+RIFAIENRSPAEGAYTEG
Sbjct: 61  VAEESSASGNWVPVVPLSALPRGERRVIIQGGETILLLWYKDRIFAIENRSPAEGAYTEG 120

Query: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI 180
           LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLF+YPVKTDENNI
Sbjct: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFIYPVKTDENNI 180

Query: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVN-------VDEELEGFGFTGKNEVINGKA 240
           YINMRGNVISD+SAEIVFSGKAQPGVTATDVN       VDE+LEGFGFTGKNEVINGKA
Sbjct: 181 YINMRGNVISDASAEIVFSGKAQPGVTATDVNVDEVKMVVDEDLEGFGFTGKNEVINGKA 240

Query: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 271
           AVIGFLLLLDFELLTGKGLLKGTGFLDFIYS SDAFK
Sbjct: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSDAFK 277

[Close]

BLAST of Carg27457 vs. ExPASy TrEMBL
Match: A0A1S3CBV1 (uncharacterized protein LOC103498694 OS=Cucumis melo OX=3656 GN=LOC103498694 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.7e-135
Identity = 247/277 (89.17%), Postives = 257/277 (92.78%), Query Frame = 0


Query: 1   MAVNSTNLTSHFALPFRRNHPISSPCTAALPILKPALRRSLFASPPSGPRKILCKASEVS 60
           MA+NSTN TSHF   FRR HPIS+PCTAALP+LKPAL RSL ASP    RKI CKASE+S
Sbjct: 1   MALNSTNFTSHFPSTFRRIHPISAPCTAALPLLKPALHRSLLASPLPPARKISCKASEIS 60

Query: 61  VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENRSPAEGAYTEG 120
           VAEESSASGNWVPVVPLSALP+GERRVIIQGGET+LLLWYK+RIFAIENRSPAEGAYTEG
Sbjct: 61  VAEESSASGNWVPVVPLSALPRGERRVIIQGGETILLLWYKDRIFAIENRSPAEGAYTEG 120

Query: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI 180
           LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLF+YPVKTDENNI
Sbjct: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFIYPVKTDENNI 180

Query: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVN-------VDEELEGFGFTGKNEVINGKA 240
           YINMRGNVISD+SAEIVFSGKAQPGVTATDVN       VDE+LEGFGFTGKNEVINGKA
Sbjct: 181 YINMRGNVISDASAEIVFSGKAQPGVTATDVNVDEVKMVVDEDLEGFGFTGKNEVINGKA 240

Query: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 271
           AVIGFLLLLDFELLTGKGLLKGTGFLDFIYS SDAFK
Sbjct: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSDAFK 277

[Close]

BLAST of Carg27457 vs. ExPASy TrEMBL
Match: A0A0A0KXX5 (Rieske domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G650460 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 8.5e-135
Identity = 247/277 (89.17%), Postives = 257/277 (92.78%), Query Frame = 0


Query: 1   MAVNSTNLTSHFALPFRRNHPISSPCTAALPILKPALRRSLFASPPSGPRKILCKASEVS 60
           MA+NSTN TSHFA  FRR HPIS+PCTAALP+LKPAL RSLFASP    RKI CKASE+S
Sbjct: 1   MALNSTNFTSHFASTFRRIHPISAPCTAALPLLKPALHRSLFASPLPLARKISCKASEIS 60

Query: 61  VAEESSASGNWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENRSPAEGAYTEG 120
           VAEESSASGNWVPVVPLSALP+GERRVIIQGGET+LLLWYK+RIFAIENRSPAEGAYTEG
Sbjct: 61  VAEESSASGNWVPVVPLSALPRGERRVIIQGGETILLLWYKDRIFAIENRSPAEGAYTEG 120

Query: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFVYPVKTDENNI 180
           LLNAKLTKDGCIVCPTTDSTFDLQTG+IKEWYP NPVLRVLTPALRKLF+Y VKTDENNI
Sbjct: 121 LLNAKLTKDGCIVCPTTDSTFDLQTGEIKEWYPKNPVLRVLTPALRKLFIYAVKTDENNI 180

Query: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVN-------VDEELEGFGFTGKNEVINGKA 240
           YINMRGNVISDSSAEIVFSGKAQPGVTATDVN       VDE+LEGFGFTGKNEVINGKA
Sbjct: 181 YINMRGNVISDSSAEIVFSGKAQPGVTATDVNVDEVRMVVDEDLEGFGFTGKNEVINGKA 240

Query: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 271
           AVIGFLLLLDFELLTGKGLLKGTGFLDFIYS SDAFK
Sbjct: 241 AVIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSDAFK 277

[Close]

BLAST of Carg27457 vs. TAIR 10
Match: AT1G71500.1 (Rieske (2Fe-2S) domain-containing protein )

HSP 1 Score: 350.9 bits (899), Expect = 9.1e-97
Identity = 175/227 (77.09%), Postives = 199/227 (87.67%), Query Frame = 0


Query: 52  ILCKASEVSVAEESSASG-NWVPVVPLSALPKGERRVIIQGGETVLLLWYKERIFAIENR 111
           + C+A+EVS +   S  G NWVPVVPLSALPKGERRV+IQ  ET+LLLWYK  +FAIENR
Sbjct: 61  VRCEATEVSSSSSVSTPGRNWVPVVPLSALPKGERRVVIQDDETILLLWYKNDVFAIENR 120

Query: 112 SPAEGAYTEGLLNAKLTKDGCIVCPTTDSTFDLQTGDIKEWYPNNPVLRVLTPALRKLFV 171
           SPAEGAY+EGLLNA+LT+DGCIVCP+TDSTFDL+TG+I+EWYP NPVLRVLTPALRKLFV
Sbjct: 121 SPAEGAYSEGLLNARLTQDGCIVCPSTDSTFDLRTGEIREWYPKNPVLRVLTPALRKLFV 180

Query: 172 YPVKTDENNIYINMRGNVISDSSAEIVFSGKAQPGVTATDVN-------VDEELEGFGFT 231
           YPVK DE NIYI++R +  ++++AEIVFSGKAQPG+TAT+VN       VDE  EGFGFT
Sbjct: 181 YPVKYDEENIYISIRDSGKTEAAAEIVFSGKAQPGLTATNVNVDEVRMIVDEGSEGFGFT 240

Query: 232 GKNEVINGKAAVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASDAFK 271
            KNEVINGKAAVIGFLLLLDFELLTGKGLLKGTGFLDF+YSASDAFK
Sbjct: 241 KKNEVINGKAAVIGFLLLLDFELLTGKGLLKGTGFLDFLYSASDAFK 287

The following BLAST results are available for this feature:

BLAST of Carg27457 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025185.1	1.1e-149	100.00	hypothetical protein SDJN02_14008 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6592369.1	1.4e-147	97.47	hypothetical protein SDJN03_14715, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022925511.1	9.0e-147	97.11	uncharacterized protein LOC111432790 [Cucurbita moschata] >XP_022925512.1 unchar...	[more]
XP_022973986.1	4.5e-146	96.39	uncharacterized protein LOC111472599 [Cucurbita maxima]	[more]
XP_023535514.1	2.9e-145	95.67	uncharacterized protein LOC111796930 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg27457 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg27457 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ECE7	4.4e-147	97.11	uncharacterized protein LOC111432790 OS=Cucurbita moschata OX=3662 GN=LOC1114327...	[more]
A0A6J1IA65	2.2e-146	96.39	uncharacterized protein LOC111472599 OS=Cucurbita maxima OX=3661 GN=LOC111472599...	[more]
A0A5D3BMM3	1.7e-135	89.17	Rieske domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CBV1	1.7e-135	89.17	uncharacterized protein LOC103498694 OS=Cucumis melo OX=3656 GN=LOC103498694 PE=...	[more]
A0A0A0KXX5	8.5e-135	89.17	Rieske domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G650460 PE=4...	[more]

BLAST of Carg27457 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71500.1	9.1e-97	77.09	Rieske (2Fe-2S) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	GENE3D	2.102.10.10		coord: 67..190 e-value: 4.3E-16 score: 60.6
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	SUPERFAMILY	50022	ISP domain	coord: 70..184
IPR012748	Rieske-like [2Fe-2S] domain, NirD-type	PFAM	PF13806	Rieske_2	coord: 70..182 e-value: 2.2E-20 score: 72.5
None	No IPR available	PANTHER	PTHR43456	RIESKE (2FE-2S) DOMAIN-CONTAINING PROTEIN	coord: 39..270
None	No IPR available	PANTHER	PTHR43456:SF2	RIESKE (2FE-2S) DOMAIN-CONTAINING PROTEIN	coord: 39..270
None	No IPR available	CDD	cd03467	Rieske	coord: 71..178 e-value: 4.52661E-20 score: 80.6106
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 199..254
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROSITE	PS51296	RIESKE	coord: 71..182 score: 13.723253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27457-RA	Carg27457-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042128	nitrate assimilation
cellular_component	GO:0031967	organelle envelope
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008942	nitrite reductase [NAD(P)H] activity