Homology
BLAST of Carg27443 vs. NCBI nr
Match:
KAG7030599.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 300.8 bits (769), Expect = 6.4e-78
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
Query: 1 MLLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTMLIDALCKEGNLDEA 60
MLLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTMLIDALCKEGNLDEA
Sbjct: 1 MLLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTMLIDALCKEGNLDEA 60
Query: 61 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 120
ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG
Sbjct: 61 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 120
Query: 121 LAEKGLMIEAKQVFDDMLNAGITPDSVD 149
LAEKGLMIEAKQVFDDMLNAGITPDSVD
Sbjct: 121 LAEKGLMIEAKQVFDDMLNAGITPDSVD 148
BLAST of Carg27443 vs. NCBI nr
Match:
KAG6599919.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 298.9 bits (764), Expect = 2.4e-77
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
Query: 1 MLLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTMLIDALCKEGNLDEA 60
MLLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTMLIDALCKEGNLDEA
Sbjct: 360 MLLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTMLIDALCKEGNLDEA 419
Query: 61 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 120
ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG
Sbjct: 420 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 479
Query: 121 LAEKGLMIEAKQVFDDMLNAGITPDSV 148
LAEKGLMIEAKQVFDDMLNAGITPDSV
Sbjct: 480 LAEKGLMIEAKQVFDDMLNAGITPDSV 506
BLAST of Carg27443 vs. NCBI nr
Match:
XP_022995400.1 (pentatricopeptide repeat-containing protein At2g01740 [Cucurbita maxima] >XP_022995410.1 pentatricopeptide repeat-containing protein At2g01740 [Cucurbita maxima])
HSP 1 Score: 295.8 bits (756), Expect = 2.0e-76
Identity = 145/147 (98.64%), Postives = 147/147 (100.00%), Query Frame = 0
Query: 1 MLLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTMLIDALCKEGNLDEA 60
+LLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYT+LIDALCKEGNLDEA
Sbjct: 360 ILLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEA 419
Query: 61 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 120
ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG
Sbjct: 420 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 479
Query: 121 LAEKGLMIEAKQVFDDMLNAGITPDSV 148
LAEKGLMIEAKQVFDDMLNAGITPDSV
Sbjct: 480 LAEKGLMIEAKQVFDDMLNAGITPDSV 506
BLAST of Carg27443 vs. NCBI nr
Match:
XP_023537260.1 (pentatricopeptide repeat-containing protein At2g01740 [Cucurbita pepo subsp. pepo] >XP_023537269.1 pentatricopeptide repeat-containing protein At2g01740 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 294.3 bits (752), Expect = 6.0e-76
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 0
Query: 1 MLLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTMLIDALCKEGNLDEA 60
+LLARGFEPDTVTLS LIDGLCKNGYLQEARRYVVKEKANEILYT+LIDALCKEGNLDEA
Sbjct: 360 ILLARGFEPDTVTLSTLIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEA 419
Query: 61 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 120
ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG
Sbjct: 420 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 479
Query: 121 LAEKGLMIEAKQVFDDMLNAGITPDSV 148
LAEKGLMIEAKQVFDDMLNAGITPDSV
Sbjct: 480 LAEKGLMIEAKQVFDDMLNAGITPDSV 506
BLAST of Carg27443 vs. NCBI nr
Match:
XP_022943027.1 (pentatricopeptide repeat-containing protein At2g01740 [Cucurbita moschata] >XP_022943028.1 pentatricopeptide repeat-containing protein At2g01740 [Cucurbita moschata])
HSP 1 Score: 292.0 bits (746), Expect = 3.0e-75
Identity = 143/147 (97.28%), Postives = 145/147 (98.64%), Query Frame = 0
Query: 1 MLLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTMLIDALCKEGNLDEA 60
MLLARGFEPDTVTLSALIDGLCKNGYL EAR+YVVKEKANEILYT+ IDALCKEGNLDEA
Sbjct: 360 MLLARGFEPDTVTLSALIDGLCKNGYLPEARQYVVKEKANEILYTVFIDALCKEGNLDEA 419
Query: 61 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 120
ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG
Sbjct: 420 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 479
Query: 121 LAEKGLMIEAKQVFDDMLNAGITPDSV 148
LAEKGLMIEAKQVFDDMLNAGITPDSV
Sbjct: 480 LAEKGLMIEAKQVFDDMLNAGITPDSV 506
BLAST of Carg27443 vs. ExPASy Swiss-Prot
Match:
Q9ZUA2 (Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana OX=3702 GN=At2g01740 PE=3 SV=1)
HSP 1 Score: 196.8 bits (499), Expect = 1.7e-49
Identity = 93/145 (64.14%), Postives = 115/145 (79.31%), Query Frame = 0
Query: 2 LLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTMLIDALCKEGNLDEAE 61
L+ RGFEPD V LS +IDG+ KNG L EA Y EKAN+++YT+LIDALCKEG+ E E
Sbjct: 364 LIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVE 423
Query: 62 RTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGL 121
R ++ EAG VPDK++YTSWIA LCKQGNL+ AF +K RMVQE + DLL Y++LI GL
Sbjct: 424 RLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGL 483
Query: 122 AEKGLMIEAKQVFDDMLNAGITPDS 147
A KGLM+EA+QVFD+MLN+GI+PDS
Sbjct: 484 ASKGLMVEARQVFDEMLNSGISPDS 508
BLAST of Carg27443 vs. ExPASy Swiss-Prot
Match:
O04491 (Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana OX=3702 GN=At1g09680 PE=3 SV=1)
HSP 1 Score: 107.8 bits (268), Expect = 1.0e-22
Identity = 52/152 (34.21%), Postives = 84/152 (55.26%), Query Frame = 0
Query: 2 LLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKE------KANEILYTMLIDALCKEG 61
++ RG PD +T + LIDG C+ G ++ A + KE + + + ++ L+ +CKEG
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALE-IRKEMDQNGIELDRVGFSALVCGMCKEG 465
Query: 62 NLDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYS 121
+ +AER ++EM AG PD YT + CK+G+ F + K M + P ++TY+
Sbjct: 466 RVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYN 525
Query: 122 SLIGGLAEKGLMIEAKQVFDDMLNAGITPDSV 148
L+ GL + G M A + D MLN G+ PD +
Sbjct: 526 VLLNGLCKLGQMKNADMLLDAMLNIGVVPDDI 556
BLAST of Carg27443 vs. ExPASy Swiss-Prot
Match:
Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)
HSP 1 Score: 106.7 bits (265), Expect = 2.3e-22
Identity = 52/151 (34.44%), Postives = 87/151 (57.62%), Query Frame = 0
Query: 2 LLARGFEPDTVTLSALIDGLCKNGYLQEARR---YVVKE--KANEILYTMLIDALCKEGN 61
+ +G EPD+VT + LI+G CK G++++A R ++++ N + YT LID LCKEG+
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 62 LDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSS 121
LD A + EM + G P+ + Y S + LCK GN+ +A + + D +TY++
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 122 LIGGLAEKGLMIEAKQVFDDMLNAGITPDSV 148
L+ + G M +A+++ +ML G+ P V
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562
BLAST of Carg27443 vs. ExPASy Swiss-Prot
Match:
P0C7R3 (Pentatricopeptide repeat-containing protein At1g64583, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g64583 PE=2 SV=1)
HSP 1 Score: 104.8 bits (260), Expect = 8.8e-22
Identity = 54/152 (35.53%), Postives = 89/152 (58.55%), Query Frame = 0
Query: 1 MLLARGFEPDTVTLSALIDGLCKNGYLQEARRYV--VKEK---ANEILYTMLIDALCKEG 60
+++ G+EP+ V + LIDGLCKNG L A + +++K A+ + Y L+ LC G
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225
Query: 61 NLDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYS 120
+A R +++M + PD +T+ I KQGNL +A + K M+Q +++P+ +TY+
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285
Query: 121 SLIGGLAEKGLMIEAKQVFDDMLNAGITPDSV 148
S+I GL G + +AK+ FD M + G P+ V
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVV 317
BLAST of Carg27443 vs. ExPASy Swiss-Prot
Match:
P0C894 (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1)
HSP 1 Score: 104.8 bits (260), Expect = 8.8e-22
Identity = 55/143 (38.46%), Postives = 83/143 (58.04%), Query Frame = 0
Query: 8 EPDTVTLSALIDGLCKNGYLQEARRYVVKEKA-----NEILYTMLIDALCKEGNLDEAER 67
EPD +T +ALI+ CK G L + + K N + Y+ L+DA CKEG + +A +
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388
Query: 68 TIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGLA 127
+M G VP++Y YTS I CK GNL AF + M+Q +E +++TY++LI GL
Sbjct: 389 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448
Query: 128 EKGLMIEAKQVFDDMLNAGITPD 146
+ M EA+++F M AG+ P+
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPN 471
BLAST of Carg27443 vs. ExPASy TrEMBL
Match:
A0A6J1K3Y4 (pentatricopeptide repeat-containing protein At2g01740 OS=Cucurbita maxima OX=3661 GN=LOC111490957 PE=4 SV=1)
HSP 1 Score: 295.8 bits (756), Expect = 9.9e-77
Identity = 145/147 (98.64%), Postives = 147/147 (100.00%), Query Frame = 0
Query: 1 MLLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTMLIDALCKEGNLDEA 60
+LLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYT+LIDALCKEGNLDEA
Sbjct: 360 ILLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEA 419
Query: 61 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 120
ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG
Sbjct: 420 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 479
Query: 121 LAEKGLMIEAKQVFDDMLNAGITPDSV 148
LAEKGLMIEAKQVFDDMLNAGITPDSV
Sbjct: 480 LAEKGLMIEAKQVFDDMLNAGITPDSV 506
BLAST of Carg27443 vs. ExPASy TrEMBL
Match:
A0A6J1FRV7 (pentatricopeptide repeat-containing protein At2g01740 OS=Cucurbita moschata OX=3662 GN=LOC111447887 PE=4 SV=1)
HSP 1 Score: 292.0 bits (746), Expect = 1.4e-75
Identity = 143/147 (97.28%), Postives = 145/147 (98.64%), Query Frame = 0
Query: 1 MLLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTMLIDALCKEGNLDEA 60
MLLARGFEPDTVTLSALIDGLCKNGYL EAR+YVVKEKANEILYT+ IDALCKEGNLDEA
Sbjct: 360 MLLARGFEPDTVTLSALIDGLCKNGYLPEARQYVVKEKANEILYTVFIDALCKEGNLDEA 419
Query: 61 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 120
ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG
Sbjct: 420 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 479
Query: 121 LAEKGLMIEAKQVFDDMLNAGITPDSV 148
LAEKGLMIEAKQVFDDMLNAGITPDSV
Sbjct: 480 LAEKGLMIEAKQVFDDMLNAGITPDSV 506
BLAST of Carg27443 vs. ExPASy TrEMBL
Match:
A0A0A0KPG7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G021290 PE=4 SV=1)
HSP 1 Score: 259.2 bits (661), Expect = 1.0e-65
Identity = 126/147 (85.71%), Postives = 137/147 (93.20%), Query Frame = 0
Query: 1 MLLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTMLIDALCKEGNLDEA 60
+LLA+GFE D VTLSAL+DGL K+GYLQEARRY+VKE ANEILYT+ IDALCKEGNLD+A
Sbjct: 233 ILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNLDDA 292
Query: 61 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 120
E+ IKEM EAGFVPDK+VYTSWIAELCKQGNLLKAF VKKRMVQE++EPDLLTYSSLIGG
Sbjct: 293 EKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLIGG 352
Query: 121 LAEKGLMIEAKQVFDDMLNAGITPDSV 148
LAEKGLMIEAKQVFDDMLN GITPD V
Sbjct: 353 LAEKGLMIEAKQVFDDMLNKGITPDFV 379
BLAST of Carg27443 vs. ExPASy TrEMBL
Match:
A0A6J1D0T3 (pentatricopeptide repeat-containing protein At2g01740 OS=Momordica charantia OX=3673 GN=LOC111015970 PE=4 SV=1)
HSP 1 Score: 256.5 bits (654), Expect = 6.7e-65
Identity = 121/146 (82.88%), Postives = 138/146 (94.52%), Query Frame = 0
Query: 2 LLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTMLIDALCKEGNLDEAE 61
LLARGFEPD +TLS L+DGLCK+GY+QEARRY+++EKANE+LYT+LIDALCKEG+LDE E
Sbjct: 361 LLARGFEPDAMTLSTLMDGLCKHGYVQEARRYLIREKANEVLYTVLIDALCKEGSLDEVE 420
Query: 62 RTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGL 121
R I+EM EAGFVPDKYVYTSWIAELCKQG+LLKAF +KKRMV+E+IEPDLLTYSSLI G+
Sbjct: 421 RIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPDLLTYSSLICGM 480
Query: 122 AEKGLMIEAKQVFDDMLNAGITPDSV 148
AEKGLMIEAKQVF+DMLN GITPDSV
Sbjct: 481 AEKGLMIEAKQVFEDMLNKGITPDSV 506
BLAST of Carg27443 vs. ExPASy TrEMBL
Match:
A0A5A7UTD7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00420 PE=3 SV=1)
HSP 1 Score: 251.5 bits (641), Expect = 2.1e-63
Identity = 125/147 (85.03%), Postives = 134/147 (91.16%), Query Frame = 0
Query: 1 MLLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTMLIDALCKEGNLDEA 60
+LLA+GFE D TLSAL+DGL K+GYLQ+ARRY VKEKANEILYT+ IDALCKEGNLDEA
Sbjct: 641 ILLAKGFEADVATLSALMDGLSKHGYLQKARRYFVKEKANEILYTVFIDALCKEGNLDEA 700
Query: 61 ERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGG 120
E+ IKEM EAGFVPDK+VYTS IAELCKQGNLLKAF VKKRMVQE+IEPDLLTYSSLI G
Sbjct: 701 EKMIKEMSEAGFVPDKFVYTSLIAELCKQGNLLKAFMVKKRMVQEHIEPDLLTYSSLISG 760
Query: 121 LAEKGLMIEAKQVFDDMLNAGITPDSV 148
LAEKGLMIEAKQVFDDMLN GITPD V
Sbjct: 761 LAEKGLMIEAKQVFDDMLNKGITPDFV 787
BLAST of Carg27443 vs. TAIR 10
Match:
AT2G01740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 196.8 bits (499), Expect = 1.2e-50
Identity = 93/145 (64.14%), Postives = 115/145 (79.31%), Query Frame = 0
Query: 2 LLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTMLIDALCKEGNLDEAE 61
L+ RGFEPD V LS +IDG+ KNG L EA Y EKAN+++YT+LIDALCKEG+ E E
Sbjct: 364 LIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVE 423
Query: 62 RTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGL 121
R ++ EAG VPDK++YTSWIA LCKQGNL+ AF +K RMVQE + DLL Y++LI GL
Sbjct: 424 RLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGL 483
Query: 122 AEKGLMIEAKQVFDDMLNAGITPDS 147
A KGLM+EA+QVFD+MLN+GI+PDS
Sbjct: 484 ASKGLMVEARQVFDEMLNSGISPDS 508
BLAST of Carg27443 vs. TAIR 10
Match:
AT1G09680.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 107.8 bits (268), Expect = 7.4e-24
Identity = 52/152 (34.21%), Postives = 84/152 (55.26%), Query Frame = 0
Query: 2 LLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKE------KANEILYTMLIDALCKEG 61
++ RG PD +T + LIDG C+ G ++ A + KE + + + ++ L+ +CKEG
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALE-IRKEMDQNGIELDRVGFSALVCGMCKEG 465
Query: 62 NLDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYS 121
+ +AER ++EM AG PD YT + CK+G+ F + K M + P ++TY+
Sbjct: 466 RVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYN 525
Query: 122 SLIGGLAEKGLMIEAKQVFDDMLNAGITPDSV 148
L+ GL + G M A + D MLN G+ PD +
Sbjct: 526 VLLNGLCKLGQMKNADMLLDAMLNIGVVPDDI 556
BLAST of Carg27443 vs. TAIR 10
Match:
AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 106.7 bits (265), Expect = 1.6e-23
Identity = 52/151 (34.44%), Postives = 87/151 (57.62%), Query Frame = 0
Query: 2 LLARGFEPDTVTLSALIDGLCKNGYLQEARR---YVVKE--KANEILYTMLIDALCKEGN 61
+ +G EPD+VT + LI+G CK G++++A R ++++ N + YT LID LCKEG+
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 62 LDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSS 121
LD A + EM + G P+ + Y S + LCK GN+ +A + + D +TY++
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 122 LIGGLAEKGLMIEAKQVFDDMLNAGITPDSV 148
L+ + G M +A+++ +ML G+ P V
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562
BLAST of Carg27443 vs. TAIR 10
Match:
AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 106.7 bits (265), Expect = 1.6e-23
Identity = 52/151 (34.44%), Postives = 87/151 (57.62%), Query Frame = 0
Query: 2 LLARGFEPDTVTLSALIDGLCKNGYLQEARR---YVVKE--KANEILYTMLIDALCKEGN 61
+ +G EPD+VT + LI+G CK G++++A R ++++ N + YT LID LCKEG+
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 62 LDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSS 121
LD A + EM + G P+ + Y S + LCK GN+ +A + + D +TY++
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 122 LIGGLAEKGLMIEAKQVFDDMLNAGITPDSV 148
L+ + G M +A+++ +ML G+ P V
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562
BLAST of Carg27443 vs. TAIR 10
Match:
AT1G63080.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 104.8 bits (260), Expect = 6.2e-23
Identity = 53/151 (35.10%), Postives = 90/151 (59.60%), Query Frame = 0
Query: 2 LLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKE-----KANEILYTMLIDALCKEGN 61
++ +G +PD VT A+I+GLCK G A + K +A+ ++Y+ +ID+LCK +
Sbjct: 196 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH 255
Query: 62 LDEAERTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSS 121
+D+A EM G PD + Y+S I+ LC G A + M++ I P+++T++S
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNS 315
Query: 122 LIGGLAEKGLMIEAKQVFDDMLNAGITPDSV 148
LI A++G +IEA+++FD+M+ I P+ V
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7030599.1 | 6.4e-78 | 100.00 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
KAG6599919.1 | 2.4e-77 | 100.00 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022995400.1 | 2.0e-76 | 98.64 | pentatricopeptide repeat-containing protein At2g01740 [Cucurbita maxima] >XP_022... | [more] |
XP_023537260.1 | 6.0e-76 | 97.96 | pentatricopeptide repeat-containing protein At2g01740 [Cucurbita pepo subsp. pep... | [more] |
XP_022943027.1 | 3.0e-75 | 97.28 | pentatricopeptide repeat-containing protein At2g01740 [Cucurbita moschata] >XP_0... | [more] |
Match Name | E-value | Identity | Description | |
Q9ZUA2 | 1.7e-49 | 64.14 | Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana OX... | [more] |
O04491 | 1.0e-22 | 34.21 | Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis th... | [more] |
Q0WVK7 | 2.3e-22 | 34.44 | Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... | [more] |
P0C7R3 | 8.8e-22 | 35.53 | Pentatricopeptide repeat-containing protein At1g64583, mitochondrial OS=Arabidop... | [more] |
P0C894 | 8.8e-22 | 38.46 | Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1K3Y4 | 9.9e-77 | 98.64 | pentatricopeptide repeat-containing protein At2g01740 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1FRV7 | 1.4e-75 | 97.28 | pentatricopeptide repeat-containing protein At2g01740 OS=Cucurbita moschata OX=3... | [more] |
A0A0A0KPG7 | 1.0e-65 | 85.71 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G021290 PE=4 SV=1 | [more] |
A0A6J1D0T3 | 6.7e-65 | 82.88 | pentatricopeptide repeat-containing protein At2g01740 OS=Momordica charantia OX=... | [more] |
A0A5A7UTD7 | 2.1e-63 | 85.03 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT2G01740.1 | 1.2e-50 | 64.14 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G09680.1 | 7.4e-24 | 34.21 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G05670.1 | 1.6e-23 | 34.44 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G05670.2 | 1.6e-23 | 34.44 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G63080.1 | 6.2e-23 | 35.10 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |