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Carg27439 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGCTACGACTGCACAAACTCTCCTCCTCACCTCTCTTCCAACTCATTTATTCCCTCTCTCACACTCTCTGCATTCTCCTATCAGTTCGTCCTCAATTCGGTTCCACGCCTGATCTCATCACCTAACCTCTGCCCGTCGCCGACGTCGATTCACCTCAAAGCACCTCCACGGATTCCGAGATGGAGAATTCTCGCGCCAATGCGCTAATCCAGATGAGGAAAGCCGTCGAGAAATCAGGCATCAACACACAAGTAACAAGAAATCAAAATCCTAATATATTCGTTTTTTCGTTCGATTTTCTGATGGATTTCTGACTCTGTGAGTGTTTCGACAGGAGTACTGTGATGCGACGATGATGAGATTCTTGATCGCGAGGTCTATGGAGCCTTCGAAAGGAGCAAAGATGTTCGTACAATGGCGGAAATGGAGAGATGCGGTGGTTCCGAAGGGTTTTATTTGTGAATCGGAGGTGAAGGAGGAGTTGGAGGCTAAGAAGATTTTCTTGCAGGGATTGTCCAAGACAGGACTGGCTGTGATGATTGTTATGGCTAAACGCCATTTTTCTTCCAAGGATCAACTCCAGTTCAAGAGTTAG AGCTACGACTGCACAAACTCTCCTCCTCACCTCTCTTCCAACTCATTTATTCCCTCTCTCACACTCTCTGCATTCTCCTATCAGTTCGTCCTCAATTCGGTTCCACGCCTGATCTCATCACCTAACCTCTGCCCGTCGCCGACGTCGATTCACCTCAAAGCACCTCCACGGATTCCGAGATGGAGAATTCTCGCGCCAATGCGCTAATCCAGATGAGGAAAGCCGTCGAGAAATCAGGCATCAACACACAAGAGTACTGTGATGCGACGATGATGAGATTCTTGATCGCGAGGTCTATGGAGCCTTCGAAAGGAGCAAAGATGTTCGTACAATGGCGGAAATGGAGAGATGCGGTGGTTCCGAAGGGTTTTATTTGTGAATCGGAGGTGAAGGAGGAGTTGGAGGCTAAGAAGATTTTCTTGCAGGGATTGTCCAAGACAGGACTGGCTGTGATGATTGTTATGGCTAAACGCCATTTTTCTTCCAAGGATCAACTCCAGTTCAAGAGTTAG ATGGAGAATTCTCGCGCCAATGCGCTAATCCAGATGAGGAAAGCCGTCGAGAAATCAGGCATCAACACACAAGAGTACTGTGATGCGACGATGATGAGATTCTTGATCGCGAGGTCTATGGAGCCTTCGAAAGGAGCAAAGATGTTCGTACAATGGCGGAAATGGAGAGATGCGGTGGTTCCGAAGGGTTTTATTTGTGAATCGGAGGTGAAGGAGGAGTTGGAGGCTAAGAAGATTTTCTTGCAGGGATTGTCCAAGACAGGACTGGCTGTGATGATTGTTATGGCTAAACGCCATTTTTCTTCCAAGGATCAACTCCAGTTCAAGAGTTAG MENSRANALIQMRKAVEKSGINTQEYCDATMMRFLIARSMEPSKGAKMFVQWRKWRDAVVPKGFICESEVKEELEAKKIFLQGLSKTGLAVMIVMAKRHFSSKDQLQFKS Homology
BLAST of Carg27439 vs. NCBI nr
Match: KAG7030603.1 (hypothetical protein SDJN02_04640 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 218.0 bits (554), Expect = 4.0e-53 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of Carg27439 vs. NCBI nr
Match: KAG6599921.1 (hypothetical protein SDJN03_05154, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 216.5 bits (550), Expect = 1.2e-52 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Carg27439 vs. NCBI nr
Match: XP_023537304.1 (SEC14 cytosolic factor-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 214.5 bits (545), Expect = 4.5e-52 Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Carg27439 vs. NCBI nr
Match: XP_022996420.1 (SEC14 cytosolic factor-like [Cucurbita maxima]) HSP 1 Score: 211.1 bits (536), Expect = 4.9e-51 Identity = 106/109 (97.25%), Postives = 108/109 (99.08%), Query Frame = 0
BLAST of Carg27439 vs. NCBI nr
Match: XP_022941639.1 (sec14 cytosolic factor-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 210.7 bits (535), Expect = 6.4e-51 Identity = 107/109 (98.17%), Postives = 108/109 (99.08%), Query Frame = 0
BLAST of Carg27439 vs. ExPASy TrEMBL
Match: A0A6J1K6Q5 (SEC14 cytosolic factor-like OS=Cucurbita maxima OX=3661 GN=LOC111491647 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 2.4e-51 Identity = 106/109 (97.25%), Postives = 108/109 (99.08%), Query Frame = 0
BLAST of Carg27439 vs. ExPASy TrEMBL
Match: A0A6J1FP08 (sec14 cytosolic factor-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446938 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 3.1e-51 Identity = 107/109 (98.17%), Postives = 108/109 (99.08%), Query Frame = 0
BLAST of Carg27439 vs. ExPASy TrEMBL
Match: A0A6J1FSN7 (SEC14 cytosolic factor-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446938 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 3.1e-51 Identity = 107/109 (98.17%), Postives = 108/109 (99.08%), Query Frame = 0
BLAST of Carg27439 vs. ExPASy TrEMBL
Match: A0A6J1CY34 (sec14 cytosolic factor-like OS=Momordica charantia OX=3673 GN=LOC111015872 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 7.2e-40 Identity = 86/109 (78.90%), Postives = 96/109 (88.07%), Query Frame = 0
BLAST of Carg27439 vs. ExPASy TrEMBL
Match: A0A1S3BT62 (sec14 cytosolic factor-like OS=Cucumis melo OX=3656 GN=LOC103493455 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 6.3e-36 Identity = 79/109 (72.48%), Postives = 93/109 (85.32%), Query Frame = 0
BLAST of Carg27439 vs. TAIR 10
Match: AT1G14820.3 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 116.7 bits (291), Expect = 1.2e-26 Identity = 59/110 (53.64%), Postives = 82/110 (74.55%), Query Frame = 0
BLAST of Carg27439 vs. TAIR 10
Match: AT1G14820.2 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 97.4 bits (241), Expect = 7.4e-21 Identity = 47/85 (55.29%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of Carg27439 vs. TAIR 10
Match: AT1G14820.1 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 97.4 bits (241), Expect = 7.4e-21 Identity = 47/85 (55.29%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of Carg27439 vs. TAIR 10
Match: AT1G01630.1 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 61.6 bits (148), Expect = 4.5e-10 Identity = 30/92 (32.61%), Postives = 51/92 (55.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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