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Carg27438 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTGTTGATCTTCACCAAATCTCATACAAGAATGTTGATATACGTGGACTCATCACAGGGTTTCAATTTCTACAGGTAAATCATATTTTCCGTAATATCTTTATACTTTTTTTTATAAAAAAAAAAAAGAAAATTTCAAGTCCTTGTGGATTTTATAGTACATTGAAACGTTTTAGTGTGCATATAATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAGAATTACTACCCAGAACGCTTGGGTAAGTGCTTCATTTTAAACATGCCATGGTTTTTCGTCAGCATTTGGAGAATGGTTTCTCGTTTCGTGGACCCTGCAACGCTCAAAAACGTAAGCCCTTCCCTTCCCTTTCCTTTTCATTTCCAATATTAATTTCTTCCAATTTTCACCATTTCTTTTGTCTCACTCTCTCGGATTCGTCCCCACCTCCTATATCAAACATCCAATTCCATTCCCTTTCATAGGAGAGAAAGTAATGTTAGAAATCATGACTTTTAAAGATGGTATAATATTTTCCACTTTAAGCATAAACTCTTCTCACATGTAAATATATTTCTTACTTATAAACTCGAGATTAGTTAGCCAATATAGAACTCCTACTTTTTTTTAAAAAGTGCGAAAAAATTTAATGAAAATGGACCCGTTTGATGTTTGATTTATGGGGTATTTGAAGTTTTGGGTGGGTGTTACGTCTGTTTCAGACAAGTCATCTCAAAGCTTTAAGGTCTTATTACTCCCCTCCCATCTATTTCTTTTGTTGGTTGGTTGGTTGTTACCTCTTCCTTTCTTACAAAACCTCCATAGGTATTAAGCTGCCACTTAGCTCCAAGTTTGTTAAGACAACACGTATAAAGAACCGGACAAAATTATTATAATACTATGCTAATTTTAAAATACATTTTTATTTTGATTCAGAAACTAAAATAAAGCATTAAATTTGTTTGAATACCTAAAATAAAGTATGTTTAAAATGTAAAGTAGAATTCCCCCATCTTTTATAGTTAAAAAAGAGGCAAAAGTTGAAACAAAAGAATAAAATGTCATGAATAGAATATAGAATAAAAAATAAAAAAAATTAAATCTTACATTTAATCTTATACGTAACATTATTTATATATATATGCATGCATTGATTTTCAGATTTTAATTGTGAGCAATGAAGAAGAAAGAAGAAGTATGATAGAGGAAGTTGGAGAAGAAGTATTGCCAGAAGAGTACGGCGGAAAGGCAAAGTTTATTGCTCTTCAAGATGCTGTTCTTCCTCACTTGGATGCCTGAATCATTAAAACCAATCCACTTAAATTTTTCGATTTTTTGAGAAGATGTTTGAAGATATTTGAAATCAATAATGTCATTTGAATGTAATTAATGACCAAATAATAGAGAGAGGGTTGTGTAAAATTTTAAGTCTTCCGGAATGTTAAAGTTAGGTAAAGATTCTCTAACTTAGCATCCATATTTACTTGAGCGGACCCATTGTGTACGGATAAGTCTATCTTGCCTTGCCCACAACAAAGCATGATTGTGACTTTTGATTTGTCGACTATTTGATATAAAGATAATCGATCTACCCCTATAAAGATGCAAAATAAATGCAAATTGAAGAGCTAGTAGAGCCTAGTAGCTAGTTTTTCTAGAAAATGTAAGATCTCGGATTATGGTATTCAAAGTATGAAATAAAACAACTTACATTACTTACTTACCATTTTTATATTCATCTATACTAATTT ATGATTGTTGATCTTCACCAAATCTCATACAAGAATGTTGATATACGTGGACTCATCACAGGGTTTCAATTTCTACAGAATTACTACCCAGAACGCTTGGGTAAGTGCTTCATTTTAAACATGCCATGGTTTTTCGTCAGCATTTGGAGAATGGTTTCTCGTTTCGTGGACCCTGCAACGCTCAAAAACATTTTAATTGTGAGCAATGAAGAAGAAAGAAGAAGTATGATAGAGGAAGTTGGAGAAGAAGTATTGCCAGAAGAGTACGGCGGAAAGGCAAAGTTTATTGCTCTTCAAGATGCTGTTCTTCCTCACTTGGATGCCTGAATCATTAAAACCAATCCACTTAAATTTTTCGATTTTTTGAGAAGATGTTTGAAGATATTTGAAATCAATAATGTCATTTGAATGTAATTAATGACCAAATAATAGAGAGAGGGTTGTGTAAAATTTTAAGTCTTCCGGAATGTTAAAGTTAGGTAAAGATTCTCTAACTTAGCATCCATATTTACTTGAGCGGACCCATTGTGTACGGATAAGTCTATCTTGCCTTGCCCACAACAAAGCATGATTGTGACTTTTGATTTGTCGACTATTTGATATAAAGATAATCGATCTACCCCTATAAAGATGCAAAATAAATGCAAATTGAAGAGCTAGTAGAGCCTAGTAGCTAGTTTTTCTAGAAAATGTAAGATCTCGGATTATGGTATTCAAAGTATGAAATAAAACAACTTACATTACTTACTTACCATTTTTATATTCATCTATACTAATTT ATGATTGTTGATCTTCACCAAATCTCATACAAGAATGTTGATATACGTGGACTCATCACAGGGTTTCAATTTCTACAGAATTACTACCCAGAACGCTTGGGTAAGTGCTTCATTTTAAACATGCCATGGTTTTTCGTCAGCATTTGGAGAATGGTTTCTCGTTTCGTGGACCCTGCAACGCTCAAAAACATTTTAATTGTGAGCAATGAAGAAGAAAGAAGAAGTATGATAGAGGAAGTTGGAGAAGAAGTATTGCCAGAAGAGTACGGCGGAAAGGCAAAGTTTATTGCTCTTCAAGATGCTGTTCTTCCTCACTTGGATGCCTGA MIVDLHQISYKNVDIRGLITGFQFLQNYYPERLGKCFILNMPWFFVSIWRMVSRFVDPATLKNILIVSNEEERRSMIEEVGEEVLPEEYGGKAKFIALQDAVLPHLDA Homology
BLAST of Carg27438 vs. NCBI nr
Match: KAG7030604.1 (SEC14, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 221.5 bits (563), Expect = 3.6e-54 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Carg27438 vs. NCBI nr
Match: XP_022941638.1 (SEC14 cytosolic factor-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 219.5 bits (558), Expect = 1.4e-53 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of Carg27438 vs. NCBI nr
Match: KAG6599921.1 (hypothetical protein SDJN03_05154, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 219.5 bits (558), Expect = 1.4e-53 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of Carg27438 vs. NCBI nr
Match: XP_023537304.1 (SEC14 cytosolic factor-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 215.7 bits (548), Expect = 2.0e-52 Identity = 105/107 (98.13%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of Carg27438 vs. NCBI nr
Match: XP_022996420.1 (SEC14 cytosolic factor-like [Cucurbita maxima]) HSP 1 Score: 213.0 bits (541), Expect = 1.3e-51 Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of Carg27438 vs. ExPASy Swiss-Prot
Match: P24280 (SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SEC14 PE=1 SV=3) HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08 Identity = 26/69 (37.68%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of Carg27438 vs. ExPASy Swiss-Prot
Match: P53989 (SEC14 cytosolic factor OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=SEC14 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.4e-08 Identity = 25/69 (36.23%), Postives = 47/69 (68.12%), Query Frame = 0
BLAST of Carg27438 vs. ExPASy Swiss-Prot
Match: P24859 (SEC14 cytosolic factor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=SEC14 PE=3 SV=2) HSP 1 Score: 59.7 bits (143), Expect = 2.4e-08 Identity = 24/69 (34.78%), Postives = 49/69 (71.01%), Query Frame = 0
BLAST of Carg27438 vs. ExPASy Swiss-Prot
Match: P33324 (CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YKL091C PE=1 SV=2) HSP 1 Score: 59.7 bits (143), Expect = 2.4e-08 Identity = 26/66 (39.39%), Postives = 47/66 (71.21%), Query Frame = 0
BLAST of Carg27438 vs. ExPASy Swiss-Prot
Match: Q10137 (Sec14 cytosolic factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sec14 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 5.3e-08 Identity = 25/69 (36.23%), Postives = 46/69 (66.67%), Query Frame = 0
BLAST of Carg27438 vs. ExPASy TrEMBL
Match: A0A6J1FSN7 (SEC14 cytosolic factor-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446938 PE=4 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 6.6e-54 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of Carg27438 vs. ExPASy TrEMBL
Match: A0A6J1K6Q5 (SEC14 cytosolic factor-like OS=Cucurbita maxima OX=3661 GN=LOC111491647 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 6.2e-52 Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of Carg27438 vs. ExPASy TrEMBL
Match: A0A6J1CY34 (sec14 cytosolic factor-like OS=Momordica charantia OX=3673 GN=LOC111015872 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 3.0e-46 Identity = 99/108 (91.67%), Postives = 101/108 (93.52%), Query Frame = 0
BLAST of Carg27438 vs. ExPASy TrEMBL
Match: A0A1S3BT62 (sec14 cytosolic factor-like OS=Cucumis melo OX=3656 GN=LOC103493455 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 3.9e-46 Identity = 94/105 (89.52%), Postives = 98/105 (93.33%), Query Frame = 0
BLAST of Carg27438 vs. ExPASy TrEMBL
Match: A0A0A0KL83 (CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G021320 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 8.6e-46 Identity = 94/105 (89.52%), Postives = 97/105 (92.38%), Query Frame = 0
BLAST of Carg27438 vs. TAIR 10
Match: AT1G14820.3 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 140.2 bits (352), Expect = 9.8e-34 Identity = 62/103 (60.19%), Postives = 84/103 (81.55%), Query Frame = 0
BLAST of Carg27438 vs. TAIR 10
Match: AT1G14820.2 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 140.2 bits (352), Expect = 9.8e-34 Identity = 62/103 (60.19%), Postives = 84/103 (81.55%), Query Frame = 0
BLAST of Carg27438 vs. TAIR 10
Match: AT1G14820.1 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 140.2 bits (352), Expect = 9.8e-34 Identity = 62/103 (60.19%), Postives = 84/103 (81.55%), Query Frame = 0
BLAST of Carg27438 vs. TAIR 10
Match: AT1G01630.1 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 85.9 bits (211), Expect = 2.2e-17 Identity = 38/99 (38.38%), Postives = 62/99 (62.63%), Query Frame = 0
BLAST of Carg27438 vs. TAIR 10
Match: AT4G36640.1 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 54.3 bits (129), Expect = 7.1e-08 Identity = 28/71 (39.44%), Postives = 41/71 (57.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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