Carg27416 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27416
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ABC transporter family protein
Location	Carg_Chr10: 10217941 .. 10221704 (+)
RNA-Seq Expression	Carg27416
Synteny	Carg27416

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAGCAATGGCGGTGCCACTTCTGAAACAATGCAAAATGCACGCGGAATGGGCACTTCGTGTCATCTGGAAGAATCGAGTGCCTGAAACAATGCCACGCCTCACTTCGTGTTCTTTCTCCATCTCCCACCCACCGAATTACTCAAATTCAACTGTTTCTCCTTCAATCCCTCTTTTATACTCCATTTCTCTGCTCCTAATTCCTATCCTACACTCTGCAAAATGCCTACCACGATGCCTGGTTCCTCTCCCACCATCGTCATCGACGCCCTCCGATTCACCTACCCTGGAATCGACGGCCATCCTCCGCCTGGTTCCAAGCCCCTCATCGATGATTTCTCCCTCACTCTCAACGCTGGCGATCGTTGCCTTCTTGTCGGATCCAATGGCGCTGGTGAGTCCCCGTTGTAGATCTCTTAAAATGTCGAACCAAATATCTAGGGGATTTTTGTTTACTCTTTTGAAATGTAATGTTGTTGACAGGGAAGACCACGATCTTGAAGATTTTGGGAGGGAAGCATATGGTGGAACCTCATATGGTTCGTGTGCTTGGAAGATCGGCGTTTCACGATACTGCTTTGACTGTTTCTGGCGATCTCTGTTATCTAGGAGGAGAGGTTCATCCTCTTTCTTTCTTCTTCCTTTCTTTTCGTTTCTTTGTTCTTGTTGCTCTTTGTTTCTCTCTGTGTTTTCTGAATCTGTTGGTCATTGATCTTGCTTGCCTTCAATTTCGTTCGTTTCCACCATGATTGAATACGGCATTGTTCTTAGAGGACTGATTTAAATCTCTTGATTTGAGGAACTAGAAATGATTTCTTTGTGTTCTGCTTTGCTTGGAATGGGATAAGATTTGTTGTTTTGTTTTTGTTTTGTGGATCATGAGGATCTTTTCTAGTGTAGCTCTCTGATCATGATTTGTGCATAGGAACATTGTTGAACATTGTTGTCTGAAATGCAAAGGAATTCATTTAAATTCTGATAACTGAAAATTACAGGGTGTTCTTGCTTGTATACACTGTGTTGGTGTTAAATCTAGGCAGTCGTTTTTCGAGTTTATTGCGTTTACGAAGCAATAACCAGCTTGATTTTGAGAAATTCTTATAAATCTTGTTTGCATGTTCTTCATTTTTTTTTTGTATCTGCTTATGTGAATAGAAAAGATACTGAAAATGCTGACGATCCCTTTCCTGCAGTGGAGGAGAGATGTGGCGTTTGCAGGATTTGAGGTTCCCATTCAAATGGCTGTGTCTGCAGAGAAGCTAATTTTTGGAGTAGGCGGGGTTGATCCTCAAAGGAGAGCTGAACTCATTAATGTAAGGTGGTCTGATAATCTCATGCTTCTGTTATGTGAACTTAACCTTCTTAGCTTGTATTGCCCTCTGCTGTACTATAATGGATGTGTAGCAACCCAAGCCCACCCGCTAGGCTAGCAGATATTGTTCTCTTTGAGCTTTCCCTTTTGAGTTTCCCTTTAAGGTTTTTAAAATGTGTCGGCTAGGGAGAGGTTTCCACACTCTTATAAAGAATGTTTTGTTCCCCTCTCTAATCGATGCGGGATCTTACAATCCACCCTTCTTCGGGGCCCAGCGTCCTCGTTGGCACTCCTACCCCTCAAAAATCATGTCAATCCACCCTCTTTAGGGCCCAGCGTCCTTGTTGGTACTCGTTCCCCTCTCCAATCGATGTGGGATCTCACAATCCACCCTTTTCAGGGCCAAGCGTCCTCGCTGGTCCTCATTTCTCTCTCCAATTGATGTGGGATCTCATAATCCATCCCCTTCAGGGCCAAGCGTCCTCGCTGGTCCTCATTTCTCTCTCCAATTGATGTGGGATCTCATAATCCACCCCCTTTCAGGGCCAAGCGTCCTCGCTGGCCTTCGTTCTTCCCTCCAATCGATGTGGGATCTCACAATCCACCCCCTTTTCGCTGGCCCTCGTTTCTCTCTCCAATCAATGTGGGATCTCACAATCCACCCTCCTCGGGGGCCAAGTGTCCTCGTTGGTCCTCGTTTCTCTCTCTCCAATTGATGTGGGATCTCACAATCCACCCCCTTTCAAGGCCAAATGTCCTCGTTGATACTCATTTCCCTCTCCAATCGATGTGAGGTCTCACAATCCACCTCCTTTAGGGCCAAGCGTTCTTGTTGACACATTGCCCAGTGTCTGGCTCTGATACCCTTTGTAACATCCCAATGGGGAAGCCCGAAAGGGAAAACACAAAGAGGACAATATCGGCTATTGGTGGGCTTGGGCCATTACAAAATGTTCTCATAAATAATGTCAATGTCAGTCTGTCAGCTCACAACTCCTTTTCTTGTTTTGGGACTTCAGATATTAGACATTGATTTATCATGGACGATGCACAAGGTATCTGATGGTCAGAGAAGACGGGTGCAAATATGCATGGGTCTTCTGAAGGCATATAAGGTATTTTATCATTTTTTCTTGTGAAATATTGATATTTTTATATTTGAAAACGAAGTTGATTGTTCTCTTTTCCTCTTAGGTTCTTCTTCTTGATGAGATAACTGTGGATCTTGACGTGCTGGCAAGGGCGAACCTTTTGAAGTTTCTGAGAAGGGAATGTGAAGAGCGTGGCGCTACAATTATCTACGCCACACATATATTTGATGGTCTCGAAGACTGGCCATCACATATGGTATGCTCAATTCTTTTGTTTGTCTTCTCTCTCTATTTGAGATCCCACCTCGGTTGAGGAGGTGAACGAAACATTCTTTGTAAGGGTGTGGAAACCTCTCCATAGTAGGATGCGTTTTAAAAACTTGGAGGGTAGCCCAAAAGGGAAAGCTCAAAGAGAATAATATCTGCTAACGGTGGGCTTGGGCTGTTACAAATGGTATTAGAGCTAGACACTGGGTGATGTGCCAGCGAGAAAAGCCTCGAAGGGGGGTGGACATGAGGCGGTGTGCCACCAAGGACGCTAGGCCCCAAAGGGAGTGGATTGTGAGACCCCACATTGGTTGAGGAGGAGAACGAAGCATTCTTTATAAGAGTGTGGAAACCTCACCTGGTGGACGCGTTTTAAAAACCTTGAGGGGATGCTTGCAAGGAAAAGCTCAAAAAGAACCATATCTGTTAGTGGTTAGCGGTCAGCTTGAGCGGTTACCTTCTAAGTCTTTGTTTTGCTTTGGTAGGTCTATGTGTCGCATGGGAAGTTGCAGATCTCAATGCCAATGGATAAAATTAAGGAGATTAGCCAGTTGTCTCTTATGGTAAGTTTTTACAACATGGAATCCTTATTTCCGTCGAATTGAAAGACCGAACAAATTTCAAATGTTCTTTATTTTCGTTATTTCGAAACTCTCAGAGAACAGTTGAGAGTTGGCTAAGGAAGGAGCGAGACGAGGAGAGGAAAAAGAGGAGGGAAAGAAAGGCAAGTGGTCTGCCTGAATTTGAAGAAAGAATAGAGGAAAGCCGTGTGACGGGGGATCCAGCCCGCGCTGCTGTTCGAGTCATGAACAACGGCTGGGCAGCAGGACGGCTTCACTCCACCGTAGCCGGAGAAGAGAACTTCTTGTTGAGCTCTAACAGAGTTCTCAGACAGTAAGAGTGTTCCTTTACTCTTTGCAATGTTTAGTAAAAGAAGTAGATAAGGCTCAAACAAAATTCATGGAAGCATTTTAGTTTCCTTGCGTATTTACAGGGTGCTCTTATGATATCGATTTCTATAGCAAGTCATCTTGTTAGATTAGACCCACTGTTTTTGAATTGCTATTAAATGAAGAAAATTTGTTGTATTATG

mRNA sequence

CAAAAGCAATGGCGCTGGAAGAATCGAGTGCCTGAAACAATGCCACGCCTCACTTCGTGTTCTTTCTCCATCTCCCACCCACCGAATTACTCAAATTCAACTGTTTCTCCTTCAATCCCTCTTTTATACTCCATTTCTCTGCTCCTAATTCCTATCCTACACTCTGCAAAATGCCTACCACGATGCCTGGTTCCTCTCCCACCATCGTCATCGACGCCCTCCGATTCACCTACCCTGGAATCGACGGCCATCCTCCGCCTGGTTCCAAGCCCCTCATCGATGATTTCTCCCTCACTCTCAACGCTGGCGATCGTTGCCTTCTTGTCGGATCCAATGGCGCTGGGAAGACCACGATCTTGAAGATTTTGGGAGGGAAGCATATGGTGGAACCTCATATGGTTCGTGTGCTTGGAAGATCGGCGTTTCACGATACTGCTTTGACTGTTTCTGGCGATCTCTGTTATCTAGGAGGAGAGTGGAGGAGAGATGTGGCGTTTGCAGGATTTGAGGTTCCCATTCAAATGGCTGTGTCTGCAGAGAAGCTAATTTTTGGAGTAGGCGGGGTTGATCCTCAAAGGAGAGCTGAACTCATTAATATATTAGACATTGATTTATCATGGACGATGCACAAGGTATCTGATGGTCAGAGAAGACGGGTGCAAATATGCATGGGTCTTCTGAAGGCATATAAGAGAACAGTTGAGAGTTGGCTAAGGAAGGAGCGAGACGAGGAGAGGAAAAAGAGGAGGGAAAGAAAGGCAAGTGGTCTGCCTGAATTTGAAGAAAGAATAGAGGAAAGCCGTGTGACGGGGGATCCAGCCCGCGCTGCTGTTCGAGTCATGAACAACGGCTGGGCAGCAGGACGGCTTCACTCCACCGTAGCCGGAGAAGAGAACTTCTTGTTGAGCTCTAACAGAGTTCTCAGACAGTAAGAGTGTTCCTTTACTCTTTGCAATGTTTAGTAAAAGAAGTAGATAAGGCTCAAACAAAATTCATGGAAGCATTTTAGTTTCCTTGCGTATTTACAGGGTGCTCTTATGATATCGATTTCTATAGCAAGTCATCTTGTTAGATTAGACCCACTGTTTTTGAATTGCTATTAAATGAAGAAAATTTGTTGTATTATG

Coding sequence (CDS)

ATGCCTACCACGATGCCTGGTTCCTCTCCCACCATCGTCATCGACGCCCTCCGATTCACCTACCCTGGAATCGACGGCCATCCTCCGCCTGGTTCCAAGCCCCTCATCGATGATTTCTCCCTCACTCTCAACGCTGGCGATCGTTGCCTTCTTGTCGGATCCAATGGCGCTGGGAAGACCACGATCTTGAAGATTTTGGGAGGGAAGCATATGGTGGAACCTCATATGGTTCGTGTGCTTGGAAGATCGGCGTTTCACGATACTGCTTTGACTGTTTCTGGCGATCTCTGTTATCTAGGAGGAGAGTGGAGGAGAGATGTGGCGTTTGCAGGATTTGAGGTTCCCATTCAAATGGCTGTGTCTGCAGAGAAGCTAATTTTTGGAGTAGGCGGGGTTGATCCTCAAAGGAGAGCTGAACTCATTAATATATTAGACATTGATTTATCATGGACGATGCACAAGGTATCTGATGGTCAGAGAAGACGGGTGCAAATATGCATGGGTCTTCTGAAGGCATATAAGAGAACAGTTGAGAGTTGGCTAAGGAAGGAGCGAGACGAGGAGAGGAAAAAGAGGAGGGAAAGAAAGGCAAGTGGTCTGCCTGAATTTGAAGAAAGAATAGAGGAAAGCCGTGTGACGGGGGATCCAGCCCGCGCTGCTGTTCGAGTCATGAACAACGGCTGGGCAGCAGGACGGCTTCACTCCACCGTAGCCGGAGAAGAGAACTTCTTGTTGAGCTCTAACAGAGTTCTCAGACAGTAA

Protein sequence

MPTTMPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYKRTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRVMNNGWAAGRLHSTVAGEENFLLSSNRVLRQ

Homology

[Close]

BLAST of Carg27416 vs. NCBI nr
Match: KAG7024037.1 (ABC transporter I family member 20 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 509.6 bits (1311), Expect = 1.5e-140
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MPTTMPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT 60
           MPTTMPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT
Sbjct: 1   MPTTMPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT 60

Query: 61  TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV 120
           TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV
Sbjct: 61  TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV 120

Query: 121 SAEKLIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYKRTVESW 180
           SAEKLIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYKRTVESW
Sbjct: 121 SAEKLIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYKRTVESW 180

Query: 181 LRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRVMNNGWAAGRLHSTVAGE 240
           LRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRVMNNGWAAGRLHSTVAGE
Sbjct: 181 LRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRVMNNGWAAGRLHSTVAGE 240

Query: 241 ENFLLSSNRVLRQ 254
           ENFLLSSNRVLRQ
Sbjct: 241 ENFLLSSNRVLRQ 253

[Close]

BLAST of Carg27416 vs. NCBI nr
Match: XP_022961477.1 (ABC transporter I family member 20 [Cucurbita moschata] >XP_023516750.1 ABC transporter I family member 20 [Cucurbita pepo subsp. pepo] >KAG6590503.1 ABC transporter I family member 20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 474.6 bits (1220), Expect = 5.5e-130
Identity = 252/330 (76.36%), Postives = 253/330 (76.67%), Query Frame = 0


Query: 1   MPTTMPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT 60
           MPTTMPGS+PTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT
Sbjct: 1   MPTTMPGSTPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT 60

Query: 61  TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV 120
           TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV
Sbjct: 61  TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV 120

Query: 121 SAEKLIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK------ 180
           SAEKLIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK      
Sbjct: 121 SAEKLIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYKVLLLDE 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ITVDLDVLARANLLKFLRRECEERGATIIYATHIFDGLEDWPSHMVYVSHGKLQISMPMD 240

Query: 241 -----------RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRV 254
                      RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRV
Sbjct: 241 KIKEISQLSLMRTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRV 300

[Close]

BLAST of Carg27416 vs. NCBI nr
Match: XP_022968754.1 (ABC transporter I family member 20 [Cucurbita maxima])

HSP 1 Score: 468.0 bits (1203), Expect = 5.1e-128
Identity = 249/330 (75.45%), Postives = 251/330 (76.06%), Query Frame = 0


Query: 1   MPTTMPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT 60
           MPTTMPGS+PTIVID LRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT
Sbjct: 1   MPTTMPGSNPTIVIDGLRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT 60

Query: 61  TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV 120
           TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV
Sbjct: 61  TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV 120

Query: 121 SAEKLIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK------ 180
           SAEKLIFGVGGVDPQRRAELINIL IDLSWTMHKVSDGQRRRVQICMGLLKAYK      
Sbjct: 121 SAEKLIFGVGGVDPQRRAELINILVIDLSWTMHKVSDGQRRRVQICMGLLKAYKVLLLDE 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ITVDLDVLARANLLKFLRRECEERGATVIYATHIFDGLEDWPSHMVYVSHGKLQISMPMD 240

Query: 241 -----------RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRV 254
                      RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRV
Sbjct: 241 KIKEISQLSLMRTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRV 300

[Close]

BLAST of Carg27416 vs. NCBI nr
Match: XP_038895579.1 (ABC transporter I family member 20 isoform X1 [Benincasa hispida])

HSP 1 Score: 445.7 bits (1145), Expect = 2.7e-121
Identity = 235/326 (72.09%), Postives = 244/326 (74.85%), Query Frame = 0


Query: 5   MPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILK 64
           MP S PTIVID LRFTYPGIDGHPPPGS PLI+DFSLTLNAGDRCLLVGSNGAGKTTILK
Sbjct: 1   MPSSDPTIVIDRLRFTYPGIDGHPPPGSNPLIEDFSLTLNAGDRCLLVGSNGAGKTTILK 60

Query: 65  ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEK 124
           ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEK
Sbjct: 61  ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEK 120

Query: 125 LIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK---------- 184
           LIFGVGGVDP+RRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK          
Sbjct: 121 LIFGVGGVDPKRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYKVLLLDEITVD 180

Query: 185 ------------------------------------------------------------ 244
                                                                       
Sbjct: 181 LDVLARADLLKFLKRECEERGATIIYATHIFDGLEDWPSHMVYVSHGKLQISMPMDKIKE 240

Query: 245 -------RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRVMNNG 254
                  RTVESWLRKERDEER++RRERKA+GLPEFEERIEESRVTGDPAR+AVRV+NNG
Sbjct: 241 ISKLSLMRTVESWLRKERDEERQRRRERKANGLPEFEERIEESRVTGDPARSAVRVINNG 300

[Close]

BLAST of Carg27416 vs. NCBI nr
Match: XP_038895580.1 (ABC transporter I family member 20 isoform X2 [Benincasa hispida])

HSP 1 Score: 445.7 bits (1145), Expect = 2.7e-121
Identity = 235/326 (72.09%), Postives = 244/326 (74.85%), Query Frame = 0


Query: 5   MPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILK 64
           MP S PTIVID LRFTYPGIDGHPPPGS PLI+DFSLTLNAGDRCLLVGSNGAGKTTILK
Sbjct: 1   MPSSDPTIVIDRLRFTYPGIDGHPPPGSNPLIEDFSLTLNAGDRCLLVGSNGAGKTTILK 60

Query: 65  ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEK 124
           ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEK
Sbjct: 61  ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEK 120

Query: 125 LIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK---------- 184
           LIFGVGGVDP+RRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK          
Sbjct: 121 LIFGVGGVDPKRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYKVLLLDEITVD 180

Query: 185 ------------------------------------------------------------ 244
                                                                       
Sbjct: 181 LDVLARADLLKFLKRECEERGATIIYATHIFDGLEDWPSHMVYVSHGKLQISMPMDKIKE 240

Query: 245 -------RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRVMNNG 254
                  RTVESWLRKERDEER++RRERKA+GLPEFEERIEESRVTGDPAR+AVRV+NNG
Sbjct: 241 ISKLSLMRTVESWLRKERDEERQRRRERKANGLPEFEERIEESRVTGDPARSAVRVINNG 300

[Close]

BLAST of Carg27416 vs. ExPASy Swiss-Prot
Match: Q9LZ98 (ABC transporter I family member 20 OS=Arabidopsis thaliana OX=3702 GN=ABCI20 PE=2 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 3.1e-107
Identity = 206/320 (64.38%), Postives = 224/320 (70.00%), Query Frame = 0


Query: 11  TIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKH 70
           T+ I  LRFTYPGIDGHPPPGSKPLI+DFS+TLN+ DRCLLVGSNGAGKTTILKILGGKH
Sbjct: 13  TVEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAGKTTILKILGGKH 72

Query: 71  MVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGVG 130
           MVEPHMVRVLGRSAFHDT LT SGDLCYLGGEWRRDVAFAGFEVPIQM +SAEK+IFGV 
Sbjct: 73  MVEPHMVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIFGVA 132

Query: 131 GVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK---------------- 190
           G+DPQRR ELI +LDID+SW +HKVSDGQRRRVQICMGLLK +K                
Sbjct: 133 GIDPQRRDELIKVLDIDISWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLAR 192

Query: 191 ------------------------------------------------------------ 250
                                                                       
Sbjct: 193 ADLLKFLRKECEERGATIIYATHIFDGLEDWPTHIVYVANGKLQLALPMEKVKETSKKSL 252

Query: 251 -RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRVMNNGWAAGRL 253
            RTVESWLRKERDEERK+R+ERKA+GLPEFE R EESRVTGDPA    R++NNGWAAGRL
Sbjct: 253 MRTVESWLRKERDEERKRRKERKANGLPEFETRTEESRVTGDPA----RMLNNGWAAGRL 312

[Close]

BLAST of Carg27416 vs. ExPASy Swiss-Prot
Match: Q3EDJ0 (ABC transporter I family member 19 OS=Arabidopsis thaliana OX=3702 GN=ABCI19 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 3.0e-46
Identity = 93/142 (65.49%), Postives = 110/142 (77.46%), Query Frame = 0


Query: 34  PLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKHMV-EPHMVRVLGRSAFHDTALTV 93
           P+  DF+L L AG RCLLVG+NG+GKTT+LKIL GKHMV   ++V+VL RSAFHDT L  
Sbjct: 28  PIFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHMVGGKNVVQVLSRSAFHDTQLVC 87

Query: 94  SGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGVGGVDPQRRAELINILDIDLSWTM 153
           SGDL YLGG W + V  AG EVP+Q   SAE +IFGV G DP RR +LI++LDI+L W M
Sbjct: 88  SGDLSYLGGSWSKTVGSAG-EVPLQGDFSAEHMIFGVEGTDPVRREKLIDLLDINLQWRM 147

Query: 154 HKVSDGQRRRVQICMGLLKAYK 175
           HKVSDGQ+RRVQICMGLL  +K
Sbjct: 148 HKVSDGQKRRVQICMGLLHPFK 168

[Close]

BLAST of Carg27416 vs. ExPASy Swiss-Prot
Match: Q9XF19 (ABC transporter I family member 21 OS=Arabidopsis thaliana OX=3702 GN=ABCI21 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.9e-46
Identity = 95/164 (57.93%), Postives = 118/164 (71.95%), Query Frame = 0


Query: 12  IVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKHM 71
           I +  ++F+Y   D        P+  DF+L L AG RCLLVG+NG+GKTT+LKIL GKHM
Sbjct: 13  IRVSGMQFSYDVQD--------PIFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHM 72

Query: 72  V-EPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGVG 131
           V   ++V+VL RSAFHDT L  SGDL YLGG W +    AG ++P+Q   SAE +IFGV 
Sbjct: 73  VGGKNVVQVLDRSAFHDTELVCSGDLSYLGGSWSKTAGSAG-DIPLQGDFSAEHMIFGVE 132

Query: 132 GVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK 175
           G+DP RR +LI++LDI+L W MHKVSDGQRRRVQICMGLL  +K
Sbjct: 133 GIDPFRREKLIDLLDINLQWRMHKVSDGQRRRVQICMGLLHPFK 167

[Close]

BLAST of Carg27416 vs. ExPASy Swiss-Prot
Match: Q7Z991 (ABC transporter domain-containing protein C20G4.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC20G4.01 PE=4 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 4.2e-24
Identity = 63/140 (45.00%), Postives = 85/140 (60.71%), Query Frame = 0


Query: 36  IDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGD 95
           +D  +L L  G R LLVG+NGAGK+T+LK+L GK + +   + V G+  F ++    S  
Sbjct: 20  LDHVTLDLPKGSRTLLVGANGAGKSTLLKLLSGKSLAKAGHISVGGKDPFRES----SSA 79

Query: 96  LCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGVGGVD-PQRRAELINILDIDLSWTMHK 155
             YLG EW  +         I   +S  +LI  VGG    +RR  LI+ILDIDL W MH 
Sbjct: 80  FVYLGTEWVNNPV-------IHRDMSVARLIASVGGDKFAERRDFLISILDIDLRWRMHA 139

Query: 156 VSDGQRRRVQICMGLLKAYK 175
           VSDG+RRRVQ+CMGLL+ ++
Sbjct: 140 VSDGERRRVQLCMGLLRPFE 148

[Close]

BLAST of Carg27416 vs. ExPASy Swiss-Prot
Match: P43569 (CCR4-associated factor 16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CAF16 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.0e-18
Identity = 56/156 (35.90%), Postives = 81/156 (51.92%), Query Frame = 0


Query: 32  SKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKHMVEPHMVRVLGRSAFHDTALT 91
           S P + D +L +    R L+VG+NGAGK+T+LK+L GKH+     + V G   F   ++ 
Sbjct: 20  SDPSVVDINLQIPWNTRSLVVGANGAGKSTLLKLLSGKHLCLDGKILVNGLDPFSPLSMN 79

Query: 92  VSGD------------LCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGVGGVDPQRRAE 151
              D              YLG EW            I   +   +L+  +G    + R E
Sbjct: 80  QVDDDESVEDSTNYQTTTYLGTEWCHMSI-------INRDIGVLELLKSIGFDHFRERGE 139

Query: 152 -LINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK 175
            L+ ILDID+ W MH++SDGQ+RRVQ+ MGLLK ++
Sbjct: 140 RLVRILDIDVRWRMHRLSDGQKRRVQLAMGLLKPWR 168

[Close]

BLAST of Carg27416 vs. ExPASy TrEMBL
Match: A0A6J1HAA8 (ABC transporter I family member 20 OS=Cucurbita moschata OX=3662 GN=LOC111462046 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 2.7e-130
Identity = 252/330 (76.36%), Postives = 253/330 (76.67%), Query Frame = 0


Query: 1   MPTTMPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT 60
           MPTTMPGS+PTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT
Sbjct: 1   MPTTMPGSTPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT 60

Query: 61  TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV 120
           TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV
Sbjct: 61  TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV 120

Query: 121 SAEKLIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK------ 180
           SAEKLIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK      
Sbjct: 121 SAEKLIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYKVLLLDE 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ITVDLDVLARANLLKFLRRECEERGATIIYATHIFDGLEDWPSHMVYVSHGKLQISMPMD 240

Query: 241 -----------RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRV 254
                      RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRV
Sbjct: 241 KIKEISQLSLMRTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRV 300

[Close]

BLAST of Carg27416 vs. ExPASy TrEMBL
Match: A0A6J1I0K8 (ABC transporter I family member 20 OS=Cucurbita maxima OX=3661 GN=LOC111467898 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 2.5e-128
Identity = 249/330 (75.45%), Postives = 251/330 (76.06%), Query Frame = 0


Query: 1   MPTTMPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT 60
           MPTTMPGS+PTIVID LRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT
Sbjct: 1   MPTTMPGSNPTIVIDGLRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT 60

Query: 61  TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV 120
           TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV
Sbjct: 61  TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV 120

Query: 121 SAEKLIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK------ 180
           SAEKLIFGVGGVDPQRRAELINIL IDLSWTMHKVSDGQRRRVQICMGLLKAYK      
Sbjct: 121 SAEKLIFGVGGVDPQRRAELINILVIDLSWTMHKVSDGQRRRVQICMGLLKAYKVLLLDE 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ITVDLDVLARANLLKFLRRECEERGATVIYATHIFDGLEDWPSHMVYVSHGKLQISMPMD 240

Query: 241 -----------RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRV 254
                      RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRV
Sbjct: 241 KIKEISQLSLMRTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRV 300

[Close]

BLAST of Carg27416 vs. ExPASy TrEMBL
Match: A0A1S3CJM7 (ABC transporter I family member 20 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501708 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 4.0e-118
Identity = 230/326 (70.55%), Postives = 241/326 (73.93%), Query Frame = 0


Query: 5   MPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILK 64
           MP S PTIVID LRFTYPGIDGHPPP SKPLI++FSLTLN+GDRCLLVGSNGAGKTTILK
Sbjct: 1   MPSSDPTIVIDRLRFTYPGIDGHPPPCSKPLIENFSLTLNSGDRCLLVGSNGAGKTTILK 60

Query: 65  ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEK 124
           ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRD+AFAGF+VPIQMAVSAEK
Sbjct: 61  ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDMAFAGFDVPIQMAVSAEK 120

Query: 125 LIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK---------- 184
           LIFGVGGVDP+RR ELINILDIDLSW MHKVSDGQRRRVQICMGLLKAYK          
Sbjct: 121 LIFGVGGVDPKRRVELINILDIDLSWKMHKVSDGQRRRVQICMGLLKAYKVLLLDEITVD 180

Query: 185 ------------------------------------------------------------ 244
                                                                       
Sbjct: 181 LDVLARANLLKFLRRECEERGATIIYATHIFDGLEDWPSHMVYVSHGKLQISMPMDKIKE 240

Query: 245 -------RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRVMNNG 254
                  RTVESWLRKERDEER +RRERKA+GLPEFEERIEESRVTGDPAR+AVRV+NNG
Sbjct: 241 ISKLSLMRTVESWLRKERDEERLRRRERKANGLPEFEERIEESRVTGDPARSAVRVINNG 300

[Close]

BLAST of Carg27416 vs. ExPASy TrEMBL
Match: A0A0A0LTD5 (ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G181360 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 5.2e-118
Identity = 230/326 (70.55%), Postives = 240/326 (73.62%), Query Frame = 0


Query: 5   MPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILK 64
           MP S PTIVID LRFTYPGIDGHPP GSKPLI++FSLTLNAGDRCLLVGSNGAGKTTILK
Sbjct: 1   MPSSDPTIVIDRLRFTYPGIDGHPPSGSKPLIENFSLTLNAGDRCLLVGSNGAGKTTILK 60

Query: 65  ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEK 124
           ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRD+AFAGF+VPIQMAVSAEK
Sbjct: 61  ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDMAFAGFDVPIQMAVSAEK 120

Query: 125 LIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK---------- 184
           LIFGVGGVDP+RR ELINILDIDLSW MHKVSDGQRRRVQICMGLLKAYK          
Sbjct: 121 LIFGVGGVDPKRRVELINILDIDLSWKMHKVSDGQRRRVQICMGLLKAYKVLLLDEITVD 180

Query: 185 ------------------------------------------------------------ 244
                                                                       
Sbjct: 181 LDVLARANLLKFLRRECEERGATIIYATHIFDGLEDWPSHMVYVSHGKLQISMPMDKIKE 240

Query: 245 -------RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRVMNNG 254
                  RTVESWLRKERDEER +RRERKA+GLPEFEERIEESRVTGDPA +AVRV+NNG
Sbjct: 241 ISKLSLMRTVESWLRKERDEERLRRRERKANGLPEFEERIEESRVTGDPAHSAVRVINNG 300

[Close]

BLAST of Carg27416 vs. ExPASy TrEMBL
Match: A0A6J1E177 (ABC transporter I family member 20 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025483 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 2.0e-117
Identity = 228/330 (69.09%), Postives = 239/330 (72.42%), Query Frame = 0


Query: 1   MPTTMPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT 60
           M    PGS PTIVID LRFTYPGIDGHPPPGSKPLIDDFSLTLNAG RCLLVGSNGAGKT
Sbjct: 1   MAVMKPGSDPTIVIDGLRFTYPGIDGHPPPGSKPLIDDFSLTLNAGHRCLLVGSNGAGKT 60

Query: 61  TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV 120
           TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEW+RDVAFAGFEV IQMAV
Sbjct: 61  TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWKRDVAFAGFEVSIQMAV 120

Query: 121 SAEKLIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK------ 180
           SAEKLIFGV G+DP+RR ELIN+LDIDLSW MHKVSDGQRRRVQICMGLLKAYK      
Sbjct: 121 SAEKLIFGVDGIDPKRRDELINMLDIDLSWKMHKVSDGQRRRVQICMGLLKAYKVLLLDE 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ITVDLDVLARANLLKFLRRECEERGATIIYATHIFDGLEDWPSHIVYVSHGKLQISMPME 240

Query: 241 -----------RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRV 254
                      RTVESWLRKERDEER++RRERKA+GLPEFE++IEESRVTGDPA  AVRV
Sbjct: 241 KIKEISKLSLMRTVESWLRKERDEERQRRRERKANGLPEFEQQIEESRVTGDPASCAVRV 300

[Close]

BLAST of Carg27416 vs. TAIR 10
Match: AT5G02270.1 (non-intrinsic ABC protein 9 )

HSP 1 Score: 389.4 bits (999), Expect = 2.2e-108
Identity = 206/320 (64.38%), Postives = 224/320 (70.00%), Query Frame = 0


Query: 11  TIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKH 70
           T+ I  LRFTYPGIDGHPPPGSKPLI+DFS+TLN+ DRCLLVGSNGAGKTTILKILGGKH
Sbjct: 13  TVEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAGKTTILKILGGKH 72

Query: 71  MVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGVG 130
           MVEPHMVRVLGRSAFHDT LT SGDLCYLGGEWRRDVAFAGFEVPIQM +SAEK+IFGV 
Sbjct: 73  MVEPHMVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIFGVA 132

Query: 131 GVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK---------------- 190
           G+DPQRR ELI +LDID+SW +HKVSDGQRRRVQICMGLLK +K                
Sbjct: 133 GIDPQRRDELIKVLDIDISWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLAR 192

Query: 191 ------------------------------------------------------------ 250
                                                                       
Sbjct: 193 ADLLKFLRKECEERGATIIYATHIFDGLEDWPTHIVYVANGKLQLALPMEKVKETSKKSL 252

Query: 251 -RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRVMNNGWAAGRL 253
            RTVESWLRKERDEERK+R+ERKA+GLPEFE R EESRVTGDPA    R++NNGWAAGRL
Sbjct: 253 MRTVESWLRKERDEERKRRKERKANGLPEFETRTEESRVTGDPA----RMLNNGWAAGRL 312

[Close]

BLAST of Carg27416 vs. TAIR 10
Match: AT5G02270.2 (non-intrinsic ABC protein 9 )

HSP 1 Score: 375.6 bits (963), Expect = 3.2e-104
Identity = 206/346 (59.54%), Postives = 225/346 (65.03%), Query Frame = 0


Query: 11  TIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKH 70
           T+ I  LRFTYPGIDGHPPPGSKPLI+DFS+TLN+ DRCLLVGSNGAGKTTILKILGGKH
Sbjct: 13  TVEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAGKTTILKILGGKH 72

Query: 71  MVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGVG 130
           MVEPHMVRVLGRSAFHDT LT SGDLCYLGGEWRRDVAFAGFEVPIQM +SAEK+IFGV 
Sbjct: 73  MVEPHMVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIFGVA 132

Query: 131 GVDPQRRAELI--------------------------NILDIDLSWTMHKVSDGQRRRVQ 190
           G+DPQRR ELI                          ++LDID+SW +HKVSDGQRRRVQ
Sbjct: 133 GIDPQRRDELIKLEHGLIFDLCHIPNLRALHCLEYYYSVLDIDISWRLHKVSDGQRRRVQ 192

Query: 191 ICMGLLKAYK-------------------------------------------------- 250
           ICMGLLK +K                                                  
Sbjct: 193 ICMGLLKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEDWPTH 252

Query: 251 ---------------------------RTVESWLRKERDEERKKRRERKASGLPEFEERI 253
                                      RTVESWLRKERDEERK+R+ERKA+GLPEFE R 
Sbjct: 253 IVYVANGKLQLALPMEKVKETSKKSLMRTVESWLRKERDEERKRRKERKANGLPEFETRT 312

[Close]

BLAST of Carg27416 vs. TAIR 10
Match: AT1G03905.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 186.8 bits (473), Expect = 2.1e-47
Identity = 93/142 (65.49%), Postives = 110/142 (77.46%), Query Frame = 0


Query: 34  PLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKHMV-EPHMVRVLGRSAFHDTALTV 93
           P+  DF+L L AG RCLLVG+NG+GKTT+LKIL GKHMV   ++V+VL RSAFHDT L  
Sbjct: 28  PIFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHMVGGKNVVQVLSRSAFHDTQLVC 87

Query: 94  SGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGVGGVDPQRRAELINILDIDLSWTM 153
           SGDL YLGG W + V  AG EVP+Q   SAE +IFGV G DP RR +LI++LDI+L W M
Sbjct: 88  SGDLSYLGGSWSKTVGSAG-EVPLQGDFSAEHMIFGVEGTDPVRREKLIDLLDINLQWRM 147

Query: 154 HKVSDGQRRRVQICMGLLKAYK 175
           HKVSDGQ+RRVQICMGLL  +K
Sbjct: 148 HKVSDGQKRRVQICMGLLHPFK 168

[Close]

BLAST of Carg27416 vs. TAIR 10
Match: AT5G44110.3 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 186.8 bits (473), Expect = 2.1e-47
Identity = 95/163 (58.28%), Postives = 117/163 (71.78%), Query Frame = 0


Query: 12  IVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKHM 71
           I +  ++F+Y   D        P+  DF+L L AG RCLLVG+NG+GKTT+LKIL GKHM
Sbjct: 13  IRVSGMQFSYDVQD--------PIFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHM 72

Query: 72  V-EPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGVG 131
           V   ++V+VL RSAFHDT L  SGDL YLGG W +    AG ++P+Q   SAE +IFGV 
Sbjct: 73  VGGKNVVQVLDRSAFHDTELVCSGDLSYLGGSWSKTAGSAG-DIPLQGDFSAEHMIFGVE 132

Query: 132 GVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAY 174
           G+DP RR +LI++LDI+L W MHKVSDGQRRRVQICMGLL  Y
Sbjct: 133 GIDPFRREKLIDLLDINLQWRMHKVSDGQRRRVQICMGLLHPY 166

[Close]

BLAST of Carg27416 vs. TAIR 10
Match: AT5G44110.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 186.4 bits (472), Expect = 2.8e-47
Identity = 95/164 (57.93%), Postives = 118/164 (71.95%), Query Frame = 0


Query: 12  IVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKHM 71
           I +  ++F+Y   D        P+  DF+L L AG RCLLVG+NG+GKTT+LKIL GKHM
Sbjct: 13  IRVSGMQFSYDVQD--------PIFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHM 72

Query: 72  V-EPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGVG 131
           V   ++V+VL RSAFHDT L  SGDL YLGG W +    AG ++P+Q   SAE +IFGV 
Sbjct: 73  VGGKNVVQVLDRSAFHDTELVCSGDLSYLGGSWSKTAGSAG-DIPLQGDFSAEHMIFGVE 132

Query: 132 GVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK 175
           G+DP RR +LI++LDI+L W MHKVSDGQRRRVQICMGLL  +K
Sbjct: 133 GIDPFRREKLIDLLDINLQWRMHKVSDGQRRRVQICMGLLHPFK 167

The following BLAST results are available for this feature:

BLAST of Carg27416 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024037.1	1.5e-140	100.00	ABC transporter I family member 20 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022961477.1	5.5e-130	76.36	ABC transporter I family member 20 [Cucurbita moschata] >XP_023516750.1 ABC tran...	[more]
XP_022968754.1	5.1e-128	75.45	ABC transporter I family member 20 [Cucurbita maxima]	[more]
XP_038895579.1	2.7e-121	72.09	ABC transporter I family member 20 isoform X1 [Benincasa hispida]	[more]
XP_038895580.1	2.7e-121	72.09	ABC transporter I family member 20 isoform X2 [Benincasa hispida]	[more]

BLAST of Carg27416 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZ98	3.1e-107	64.38	ABC transporter I family member 20 OS=Arabidopsis thaliana OX=3702 GN=ABCI20 PE=...	[more]
Q3EDJ0	3.0e-46	65.49	ABC transporter I family member 19 OS=Arabidopsis thaliana OX=3702 GN=ABCI19 PE=...	[more]
Q9XF19	3.9e-46	57.93	ABC transporter I family member 21 OS=Arabidopsis thaliana OX=3702 GN=ABCI21 PE=...	[more]
Q7Z991	4.2e-24	45.00	ABC transporter domain-containing protein C20G4.01 OS=Schizosaccharomyces pombe ...	[more]
P43569	2.0e-18	35.90	CCR4-associated factor 16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288...	[more]

BLAST of Carg27416 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAA8	2.7e-130	76.36	ABC transporter I family member 20 OS=Cucurbita moschata OX=3662 GN=LOC111462046...	[more]
A0A6J1I0K8	2.5e-128	75.45	ABC transporter I family member 20 OS=Cucurbita maxima OX=3661 GN=LOC111467898 P...	[more]
A0A1S3CJM7	4.0e-118	70.55	ABC transporter I family member 20 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A0A0LTD5	5.2e-118	70.55	ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G18...	[more]
A0A6J1E177	2.0e-117	69.09	ABC transporter I family member 20 isoform X1 OS=Momordica charantia OX=3673 GN=...	[more]

BLAST of Carg27416 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02270.1	2.2e-108	64.38	non-intrinsic ABC protein 9	[more]
AT5G02270.2	3.2e-104	59.54	non-intrinsic ABC protein 9	[more]
AT1G03905.1	2.1e-47	65.49	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G44110.3	2.1e-47	58.28	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G44110.1	2.8e-47	57.93	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 170..190
None	No IPR available	PANTHER	PTHR12847	ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED	coord: 9..174 coord: 175..252
None	No IPR available	PANTHER	PTHR12847:SF12	ABC TRANSPORTER I FAMILY MEMBER 20	coord: 9..174 coord: 175..252
IPR003439	ABC transporter-like, ATP-binding domain	PFAM	PF00005	ABC_tran	coord: 37..172 e-value: 5.8E-11 score: 43.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..197 e-value: 1.1E-17 score: 66.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27416-RA	Carg27416-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding