Carg27305 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg27305
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr15: 60730 .. 61120 (+)
RNA-Seq ExpressionCarg27305
SyntenyCarg27305
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGCGTTGGCCAGAGAAGGCGGGGTCTTTGTGCAACTTGGAGTGAAGGGAAGAGATGGGCATGCTGGTTCTTCTGTCAAATTGGATACATGGGTTTGTGCAACGGGCGACGGCCTATTCTGGGAAGATTGTAAACCTGATTTAATTACTAACATGAAGATGGAAAGGAAGAAGAAGAGAAGAAGAATGAGCTTAAGGTTAATGGAGAGTGGAGGTCTGGACCTCATGCTCATTGTTGAATGTTGTTGTTGAAGCTTTTTCTGAAAATTTATGGACGAATTACATTAACATTCAGACGATGGAAGAGGGAGTGAAATGAGTTTCAAATTCTTCACGAAGTGCAGCAGCAGAGATCCCAGACATTTATGAGAACGCAAAGCTGCAGTGA

mRNA sequence

ATGAGAGCGTTGGCCAGAGAAGGCGGGGTCTTTGTGCAACTTGGAGTGAAGGGAAGAGATGGGCATGCTGGTTCTTCTGTCAAATTGGATACATGGGTTTGTGCAACGGGCGACGGCCTATTCTGGGAAGATTGTAAACCTGATTTAATTACTAACATGAAGATGGAAAGGAAGAAGAAGAGAAGAAGAATGAGCTTAAGTGCAGCAGCAGAGATCCCAGACATTTATGAGAACGCAAAGCTGCAGTGA

Coding sequence (CDS)

ATGAGAGCGTTGGCCAGAGAAGGCGGGGTCTTTGTGCAACTTGGAGTGAAGGGAAGAGATGGGCATGCTGGTTCTTCTGTCAAATTGGATACATGGGTTTGTGCAACGGGCGACGGCCTATTCTGGGAAGATTGTAAACCTGATTTAATTACTAACATGAAGATGGAAAGGAAGAAGAAGAGAAGAAGAATGAGCTTAAGTGCAGCAGCAGAGATCCCAGACATTTATGAGAACGCAAAGCTGCAGTGA

Protein sequence

MRALAREGGVFVQLGVKGRDGHAGSSVKLDTWVCATGDGLFWEDCKPDLITNMKMERKKKRRRMSLSAAAEIPDIYENAKLQ
Homology
[Close]
BLAST of Carg27305 vs. NCBI nr
Match: KAG7015878.1 (hypothetical protein SDJN02_20981, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 170.2 bits (430), Expect = 7.2e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1  MRALAREGGVFVQLGVKGRDGHAGSSVKLDTWVCATGDGLFWEDCKPDLITNMKMERKKK 60
          MRALAREGGVFVQLGVKGRDGHAGSSVKLDTWVCATGDGLFWEDCKPDLITNMKMERKKK
Sbjct: 1  MRALAREGGVFVQLGVKGRDGHAGSSVKLDTWVCATGDGLFWEDCKPDLITNMKMERKKK 60

Query: 61 RRRMSLSAAAEIPDIYENAKLQ 83
          RRRMSLSAAAEIPDIYENAKLQ
Sbjct: 61 RRRMSLSAAAEIPDIYENAKLQ 82

The following BLAST results are available for this feature:
BLAST of Carg27305 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7015878.17.2e-39100.00hypothetical protein SDJN02_20981, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg27305 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg27305 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg27305 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg27305-RACarg27305-RAmRNA