Carg27060 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCTACTACAAGTCCACCAGATCATGAACAAACATCCACCTAAACCACAAGATTCTATAGGGCATCATTCTAGCTCTGTGCCATATTATTCACAAGATTCTTTCCAAGAACAATCAACAAAGAAAGCCCTGGTTCAGATGTTTCCGACCACCACCGGTTCGAGTCACGAAATCGGGTTTTCGACTCCTCTCTCCGGTGATTCACCATCCGAACACATAACAATCCCTCCATCAGCCCAGAGGCGTCCATCGATGGACGGACGACCCATACTTTTCGTACCCAAATTTATTTACATCACAGAAACCAAATCCAGGCTTTTGATCATTCAATCAGCTGATGGTTCTTTGGATCTTCAGGAGGTATGAGTTCTATGCCATGCCTTCTTTACAAGCAATTTGTTAGTATCTAAATACACGATCCACACACCATACATACATAAACTCACTAGATGGAGCCTCGTATGCATACACCACGGAGTCTAACTACGGGCTAGCACACATTCACAGGTTGTTGGAAGCCACAAAGGGAAAAGAGTGTGTATCATCATGATGTATGCATCTGTACTAATCATACTGAGAAAGTATCTCAATGCTTCGTGAGACATAAATATGCATAAAGTCCTAATATTAGATAATTTATTTTTCGGTGGCTCGGGTATTTCACTAAGAGCAGTAAAACATGTTTTATCCTACATACAACATTATATTGAAGTAGTATCTTACATTCCAAACATCCTTAAAAACATCGATAAGGAGGCTATTAATATTTTCAAGTATTTAATATTTAATTAGACCTCGTCAGCATTAATCGGTTTGGTTGTTGGTCAAAAGGTGGCCGTAGAGAGTGATTAATGATTTGTTAATCACGTGTTAATTACATTTGGCGTTTTGTGACGGCTATCTAAATTCAATATTCACTTAGTTTCAAATTCAAATTTGTAACTTCTATAACCTCCTTTTCTTTTGTTTTTCTTCTCAATTCGAAATAACATTCATTAAAATGAGTAGAATTACGGGTTCGGTTTGTGTTTCGGATTGCTTGCTCTTGTTTATTGGAACTCTCTTACCCTATTGTTTGCTGTGACCCACGACAAATATTGAGGTATGTTGGTTGGAAGTTGCCTTGACGCTGCACCTTCTTCTTTGAATGGGCCGTATACCCGGTTTGTGCTGACAGGCTATATACTATCCAGATACTATTTGTTGATTGTTCTACTTTTTTATAAAACAACGAAAACATATTTGATCACATTTCTTAGTTGCTCTGGATCTCTAAAATTTTATGTAAAATTTTTTATATAGGGATGTTACATGGTCGGTTAAATCTTTAAACAACCCAATTTGTGATTGTTCGGTTTGGTTCTGCAACATTAATGAGTTTAACTCTATTCATAGTCACCATGTGTCCTAACCATGTTAAACATCAATGTGAGATCCCACATTGGTTGGATGTTGAGAGAGACGAAATTATTATAAGGGTGTGAAAAACTCTCTAACAAATATCTAATCTTAGATTGATAGTATACTAACGGGTCAAAGGCGAACAATATGTATGGTGTTGGGTTTACACGATAAAGGCAGAACCCGACGGTGACAACAGGCGTGGGCTCCAAGAGGGGATGTGAATCCCGTGGTTAGAGAGGAGAACGAAACATTCCTTTATCGTGAGGTGACGGCCGTACTGGGTGATCAAGTAAGTTGGTTGGTCAAGTCTAGGCGAATTGTGTATAGGGTAGGATTGAGTTGAGTTGGTCAAGTTGACCCGACCCAAATCAAAAGTAGGGTTTTCAAAAATGTCAACATGTGAACTACCGAATTTTTCATCTCTTCATAAATCAACCTACCCAAATCAAACAGGTGGTTGCCCCCTATTCGGTGGTCAACTTGCCTGGGTTGGTTGTCCCCTATTTTCGGGTTGTCAACTTGCCATTGGGTTGGGTTGTCCCCCTATTTTCGGGTTGTCAACCTGCCAACTGACCCAAATTTTCAATTTTTCAAAAACTCAACCCTACCCAAACCAAAAGTAGGGTAGGATTAGGTTGAGTTATCACCCTATTTTCGGGTTGATAACCTACTAACTGACCCCAATTTTTAAATTTTCAAAAATTCAACCATGGATTGGGTTGGGCTATCATCCTATTTTCGGGTGGATCAAGTTGACTTCCAAAAAAGTCACTACAAATACCCCAATCTTCAATTTCAAAAATTCAACCCTACCAACGATAATAACCAAATCCACTAACTATACGATCTCAGTGTTATCAAGTTATAGACTACATGCAATCAACTGTAACAAACGAAAACAGAACTTCTTAAACATCTCGAACAATCATTACTATTGTCGGTTTATCTTAACTAGAAATGTATATTTGTTTTACGATGTAGAATTCATACCACGAGCCAACGAGACACACACATACGCCGAAGCCGAATCTCAAAAGGATTATGATGGATGCATAGAACAAGGAATAGTGTTTGATTCCACCATTATTTTAACCCTACACAATCCTCCTCGTCGTCTTTACTTTGTGTGCACTGATGGTAACCTTGCAACAATGCATGAAATTCCCATTGATGTCTTACCCAAAGCACACACGCAATATGCACTCCAAATTGATATCTTCCTTGCTTCTCTTCATCACTATTGTATATGTCTTGTTTGAGATATCTATTGTTCTTTTCGATTCTTGTATTATAAGTGTTCGTAGTTCGATTGAAGCCTATGTTGTTACTGTTTAAAGTTAAATTACACAAATACTCTCGAGTTTCCGTAGGTCGATCGAAGAGCACAAACCCGAAACAAATAATCGAAGTAGTACTGAAAATATATTCTAAGTAGATCCAGTGACGCTAATTATAGATGTTTTAATATCGTGCACCCTGATTATGAGTTATGATCAAAGACTGACTTTAGTGCTTCCCGATTCATGATGCCTCAAGAGTAGTTCCAAAGTCTTATTAAGTAATAATTTGGGTTATAAACTTCAAGGTGCGTTAAGTACTTGTTACATCACGACATTCAGAAGTTGATATATCAGTTATTGGCGTAACGGCATCACAGAACGGAGACCAGTTCTTTTCACACGGGTAAATATTGCGCTTACTAGGAATAATTAAATGGTCCTACCCGTCGTATAAGTTTTAGTAACGATCACGGCTTGATCTATGTAGAGACTATGTATATCGAGAATTTTCATGTGTGCTTATCGTGAATGTAATGGTAGGGTCTCTGATAAGGCCTCTTGTAACGACTCAAAATTTCTAACTAATTTAGTCTCACTGAATGAATCATGACATGAATGGAAATACTTTATTAACTTTCATAAAAGCATCTTCGTCTAAAACATAGCCATGGACTGCGTGTTTGGAAAAACACCTTTAATAACTACAACAAAAGGACAACATTAAAATAAATAAACGTTTAAATTAAAAACATTTATTCTGTCTAGTTAGAAATAAATTGATAACCTATAATGTTCATGGTTCGTTGCATTTTCGTTAGCCGTACATGATGAACTTGAGGTGCTGTGATGTGAGAATACTAGTGACCCACTATTGGGGTTAGAGGCATATAATGCAATACGGACTATATATCGTCTTTTTCCTACGCATATCCTAACGCACAATTGATATCCATTCAATACACAACTCATGCGTGCAAGTATGGGCTCACTAGTCAGTTTGAACGGGAGCCCTTTTTATCGATGAGTTGTCTTGGTAGCTCCTATCGCACCATGATTAACTGCCACGTGAATTTGAGATGGTGTAGAAGAAAGAAATATCTAGAACATCCCACGAACTTAGAAAAAATATATAATAAAATAGTGAAAAGTTCGAAAAATTGGTCAAAGTCAATCCTGGAGGAGTATTTTGGTCATTTTTGGGAAAAAGAAAGAAAGAGGGAAAGAGAAACCGTGGAGAGAAGAAAGTTTTAGAGAAAGGGAGGAGGTATAACCTCACAAGCTCATGGCACGGGAGTTGGTTCGGTCGTCTTCACTTAAAAAACTTTCTCAGAACTTCGAGAAGAAGTATTATGGACTTTGGTATCGTCCAAAACCGTCAAGCAACAAAGAAGATCCAGAGTTACGTTTTTGAGTTTTTTGTTCTCGGATTTCCTCAGTATTGGGATATTTGATTTAGGGTTTACGGCTGTGAGTGTACGAAATTGTGGTCAAAGCTAGTGGAACCAAGCAGTGGGCATTACGTAATCATTAGTAGATAACATATTTGAATAAATTTTGAGTTACTTTTATTTGAAATTGGTTTATGAATGTTTGATGTGTAGTATAGTGTATATATATTTTTTAAACGGATATCTATATGATACTAATCATGTGGTGTGTGTCATGCTGTCGTGAACCTTGTTTTTTAATAAAAGAAATACGGTATATATATATATTTTTTTTAATATTTTTCCTTTAAGTTGGCTGATGTATTTTTTATTTGATTTTTTTTTTTTAGGAACTCGTCTCAAAGAGGAGGTTTTCCATGTGTTGTCCGTTAGTCGAACGATCCAGCATAGTTGATATTGTCCCTGAAGCGAAACCGATCCGCCCAAAGATTTCCTCCAAATGA ATGGAGCTACTACAAGTCCACCAGATCATGAACAAACATCCACCTAAACCACAAGATTCTATAGGGCATCATTCTAGCTCTGTGCCATATTATTCACAAGATTCTTTCCAAGAACAATCAACAAAGAAAGCCCTGGTTCAGATGTTTCCGACCACCACCGGTTCGAGTCACGAAATCGGGTTTTCGACTCCTCTCTCCGGTGATTCACCATCCGAACACATAACAATCCCTCCATCAGCCCAGAGGCGTCCATCGATGGACGGACGACCCATACTTTTCGTACCCAAATTTATTTACATCACAGAAACCAAATCCAGGCTTTTGATCATTCAATCAGCTGATGAATTCATACCACGAGCCAACGAGACACACACATACGCCGAAGCCGAATCTCAAAAGGATTATGATGGATGCATAGAACAAGGAATAGAACTCGTCTCAAAGAGGAGGTTTTCCATGTGTTGTCCGTTAGTCGAACGATCCAGCATAGTTGATATTGTCCCTGAAGCGAAACCGATCCGCCCAAAGATTTCCTCCAAATGA ATGGAGCTACTACAAGTCCACCAGATCATGAACAAACATCCACCTAAACCACAAGATTCTATAGGGCATCATTCTAGCTCTGTGCCATATTATTCACAAGATTCTTTCCAAGAACAATCAACAAAGAAAGCCCTGGTTCAGATGTTTCCGACCACCACCGGTTCGAGTCACGAAATCGGGTTTTCGACTCCTCTCTCCGGTGATTCACCATCCGAACACATAACAATCCCTCCATCAGCCCAGAGGCGTCCATCGATGGACGGACGACCCATACTTTTCGTACCCAAATTTATTTACATCACAGAAACCAAATCCAGGCTTTTGATCATTCAATCAGCTGATGAATTCATACCACGAGCCAACGAGACACACACATACGCCGAAGCCGAATCTCAAAAGGATTATGATGGATGCATAGAACAAGGAATAGAACTCGTCTCAAAGAGGAGGTTTTCCATGTGTTGTCCGTTAGTCGAACGATCCAGCATAGTTGATATTGTCCCTGAAGCGAAACCGATCCGCCCAAAGATTTCCTCCAAATGA MELLQVHQIMNKHPPKPQDSIGHHSSSVPYYSQDSFQEQSTKKALVQMFPTTTGSSHEIGFSTPLSGDSPSEHITIPPSAQRRPSMDGRPILFVPKFIYITETKSRLLIIQSADEFIPRANETHTYAEAESQKDYDGCIEQGIELVSKRRFSMCCPLVERSSIVDIVPEAKPIRPKISSK Homology
BLAST of Carg27060 vs. NCBI nr
Match: KAG7025136.1 (hypothetical protein SDJN02_13959, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 359.0 bits (920), Expect = 2.4e-95 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of Carg27060 vs. NCBI nr
Match: KAG7025137.1 (hypothetical protein SDJN02_13960, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 76.6 bits (187), Expect = 2.4e-10 Identity = 44/78 (56.41%), Postives = 48/78 (61.54%), Query Frame = 0
BLAST of Carg27060 vs. NCBI nr
Match: KAG6592298.1 (IST1-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 68.2 bits (165), Expect = 8.4e-08 Identity = 42/79 (53.16%), Postives = 47/79 (59.49%), Query Frame = 0
BLAST of Carg27060 vs. NCBI nr
Match: XP_023536600.1 (uncharacterized protein LOC111797723 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 68.2 bits (165), Expect = 8.4e-08 Identity = 42/79 (53.16%), Postives = 47/79 (59.49%), Query Frame = 0
BLAST of Carg27060 vs. NCBI nr
Match: XP_022930138.1 (uncharacterized protein LOC111436655 isoform X1 [Cucurbita moschata] >XP_022930139.1 uncharacterized protein LOC111436655 isoform X2 [Cucurbita moschata] >XP_022930140.1 uncharacterized protein LOC111436655 isoform X1 [Cucurbita moschata]) HSP 1 Score: 68.2 bits (165), Expect = 8.4e-08 Identity = 42/79 (53.16%), Postives = 47/79 (59.49%), Query Frame = 0
BLAST of Carg27060 vs. ExPASy TrEMBL
Match: A0A6J1EU69 (uncharacterized protein LOC111436655 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436655 PE=3 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 4.1e-08 Identity = 42/79 (53.16%), Postives = 47/79 (59.49%), Query Frame = 0
BLAST of Carg27060 vs. ExPASy TrEMBL
Match: A0A6J1I985 (uncharacterized protein LOC111472688 OS=Cucurbita maxima OX=3661 GN=LOC111472688 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 5.3e-08 Identity = 39/70 (55.71%), Postives = 44/70 (62.86%), Query Frame = 0
BLAST of Carg27060 vs. ExPASy TrEMBL
Match: A0A6J1IGG2 (cucumber peeling cupredoxin-like OS=Cucurbita maxima OX=3661 GN=LOC111472691 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 3.5e-07 Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 0
BLAST of Carg27060 vs. ExPASy TrEMBL
Match: A0A6J1EW61 (cucumber peeling cupredoxin-like OS=Cucurbita moschata OX=3662 GN=LOC111436657 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.7e-06 Identity = 37/71 (52.11%), Postives = 45/71 (63.38%), Query Frame = 0
BLAST of Carg27060 vs. ExPASy TrEMBL
Match: A0A5D3D4I0 (IST1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold607G00160 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 2.1e-04 Identity = 35/79 (44.30%), Postives = 44/79 (55.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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