Carg27041 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGGATTTTTCTATTCATCACCTCACCACAAAGGAGATCAAAAGGCTATAGAAAAAATTAAGGTATATCCAAACCTTTACTTCAACCATCTTCAATATCTAATCTTATTCATTTTCACAGAACAAAAAGACCATAATTTATCCAAAAGGCTTAGACATCACATGGGGCAAGGACGACCGATACTGGCGCTTGCCTAGCCAATACCAAAACATGTAAGCGACTCTATCCGTTTTCATTTAAGAATTACATGCTTTGGTCGACATATATCGATATTTAACCTCTCAGGAAGGACCCGAGCGCTGCTGCGGAGCTGCTGCAAGTGTCGTGGCTCGAGGTGACGTGCTCGACCGACAATGTCGAGGCTGGAAAAAGCTATAGAGTTGGCTTCAACGTATCGATGGCACCAGCGGCTTTTGGATGGAAAGGGTGTGACGTTTACATTATGGCTAAGATTGGGAAGGCAGGGAGATTTGTGTACAAAAAGATGTCGCTAGAGAACAAATGTTCTGTTCCAAATAAGTTTAGTATGCCGGAGGAGGGTCTTATTATCACTGTGAAACCTCCACCAAGCTCACTAGGAGACCATTGTCTGTACTTCGGAATGTACGAG ATGGTTGGATTTTTCTATTCATCACCTCACCACAAAGGAGATCAAAAGGCTATAGAAAAAATTAAGAACAAAAAGACCATAATTTATCCAAAAGGCTTAGACATCACATGGGGCAAGGACGACCGATACTGGCGCTTGCCTAGCCAATACCAAAACATGAAGGACCCGAGCGCTGCTGCGGAGCTGCTGCAAGTGTCGTGGCTCGAGGTGACGTGCTCGACCGACAATGTCGAGGCTGGAAAAAGCTATAGAGTTGGCTTCAACGTATCGATGGCACCAGCGGCTTTTGGATGGAAAGGGTGTGACGTTTACATTATGGCTAAGATTGGGAAGGCAGGGAGATTTGTGTACAAAAAGATGTCGCTAGAGAACAAATGTTCTGTTCCAAATAAGTTTAGTATGCCGGAGGAGGGTCTTATTATCACTGTGAAACCTCCACCAAGCTCACTAGGAGACCATTGTCTGTACTTCGGAATGTACGAG ATGGTTGGATTTTTCTATTCATCACCTCACCACAAAGGAGATCAAAAGGCTATAGAAAAAATTAAGAACAAAAAGACCATAATTTATCCAAAAGGCTTAGACATCACATGGGGCAAGGACGACCGATACTGGCGCTTGCCTAGCCAATACCAAAACATGAAGGACCCGAGCGCTGCTGCGGAGCTGCTGCAAGTGTCGTGGCTCGAGGTGACGTGCTCGACCGACAATGTCGAGGCTGGAAAAAGCTATAGAGTTGGCTTCAACGTATCGATGGCACCAGCGGCTTTTGGATGGAAAGGGTGTGACGTTTACATTATGGCTAAGATTGGGAAGGCAGGGAGATTTGTGTACAAAAAGATGTCGCTAGAGAACAAATGTTCTGTTCCAAATAAGTTTAGTATGCCGGAGGAGGGTCTTATTATCACTGTGAAACCTCCACCAAGCTCACTAGGAGACCATTGTCTGTACTTCGGAATGTACGAG MVGFFYSSPHHKGDQKAIEKIKNKKTIIYPKGLDITWGKDDRYWRLPSQYQNMKDPSAAAELLQVSWLEVTCSTDNVEAGKSYRVGFNVSMAPAAFGWKGCDVYIMAKIGKAGRFVYKKMSLENKCSVPNKFSMPEEGLIITVKPPPSSLGDHCLYFGMYE Homology
BLAST of Carg27041 vs. NCBI nr
Match: KAG7012604.1 (Protein PHLOEM PROTEIN 2-LIKE A9, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 345.5 bits (885), Expect = 2.5e-91 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of Carg27041 vs. NCBI nr
Match: XP_022955086.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita moschata]) HSP 1 Score: 344.0 bits (881), Expect = 7.1e-91 Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of Carg27041 vs. NCBI nr
Match: XP_023542832.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 335.5 bits (859), Expect = 2.5e-88 Identity = 157/161 (97.52%), Postives = 158/161 (98.14%), Query Frame = 0
BLAST of Carg27041 vs. NCBI nr
Match: XP_022994904.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita maxima]) HSP 1 Score: 327.0 bits (837), Expect = 9.0e-86 Identity = 151/161 (93.79%), Postives = 158/161 (98.14%), Query Frame = 0
BLAST of Carg27041 vs. NCBI nr
Match: KAG6573457.1 (Protein PHLOEM PROTEIN 2-LIKE A9, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 301.2 bits (770), Expect = 5.3e-78 Identity = 140/145 (96.55%), Postives = 143/145 (98.62%), Query Frame = 0
BLAST of Carg27041 vs. ExPASy Swiss-Prot
Match: Q9SA16 (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 2.4e-25 Identity = 64/161 (39.75%), Postives = 84/161 (52.17%), Query Frame = 0
BLAST of Carg27041 vs. ExPASy TrEMBL
Match: A0A6J1GSR3 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucurbita moschata OX=3662 GN=LOC111457157 PE=4 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 3.5e-91 Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of Carg27041 vs. ExPASy TrEMBL
Match: A0A6J1K461 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucurbita maxima OX=3661 GN=LOC111490489 PE=4 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 4.4e-86 Identity = 151/161 (93.79%), Postives = 158/161 (98.14%), Query Frame = 0
BLAST of Carg27041 vs. ExPASy TrEMBL
Match: A0A5A7TIT6 (Protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1814G00100 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 7.0e-68 Identity = 128/162 (79.01%), Postives = 139/162 (85.80%), Query Frame = 0
BLAST of Carg27041 vs. ExPASy TrEMBL
Match: A0A1S3CAI0 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo OX=3656 GN=LOC103498273 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 7.0e-68 Identity = 128/162 (79.01%), Postives = 139/162 (85.80%), Query Frame = 0
BLAST of Carg27041 vs. ExPASy TrEMBL
Match: A0A0A0LYD1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G703580 PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 4.7e-64 Identity = 121/162 (74.69%), Postives = 134/162 (82.72%), Query Frame = 0
BLAST of Carg27041 vs. TAIR 10
Match: AT1G31200.1 (phloem protein 2-A9 ) HSP 1 Score: 116.7 bits (291), Expect = 1.7e-26 Identity = 64/161 (39.75%), Postives = 84/161 (52.17%), Query Frame = 0
BLAST of Carg27041 vs. TAIR 10
Match: AT1G10155.1 (phloem protein 2-A10 ) HSP 1 Score: 104.4 bits (259), Expect = 8.9e-23 Identity = 61/167 (36.53%), Postives = 86/167 (51.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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