Homology
BLAST of Carg27026 vs. NCBI nr
Match:
KAG7030065.1 (Endoribonuclease Dicer-like 3a, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 3276.9 bits (8495), Expect = 0.0e+00
Identity = 1641/1641 (100.00%), Postives = 1641/1641 (100.00%), Query Frame = 0
Query: 1 MHNPEEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV 60
MHNPEEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV
Sbjct: 1 MHNPEEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV 60
Query: 61 LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY 120
LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY
Sbjct: 61 LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY 120
Query: 121 GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP 180
GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP
Sbjct: 121 GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP 180
Query: 181 YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE 240
YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE
Sbjct: 181 YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE 240
Query: 241 VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKA 300
VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKA
Sbjct: 241 VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKA 300
Query: 301 LKKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL 360
LKKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL
Sbjct: 301 LKKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL 360
Query: 361 RVIGESFPLGNENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII 420
RVIGESFPLGNENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII
Sbjct: 361 RVIGESFPLGNENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII 420
Query: 421 AANVIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE 480
AANVIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE
Sbjct: 421 AANVIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE 480
Query: 481 EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR 540
EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR
Sbjct: 481 EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR 540
Query: 541 SMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASVTADYSVGLIHQYCKKLPGDKYFSP 600
SMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASVTADYSVGLIHQYCKKLPGDKYFSP
Sbjct: 541 SMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASVTADYSVGLIHQYCKKLPGDKYFSP 600
Query: 601 KPIFQLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH 660
KPIFQLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH
Sbjct: 601 KPIFQLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH 660
Query: 661 LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFD 720
LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFD
Sbjct: 661 LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFD 720
Query: 721 FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK 780
FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK
Sbjct: 721 FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK 780
Query: 781 CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWK 840
CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWK
Sbjct: 781 CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWK 840
Query: 841 IHWRAIDSCVSVVEFLKKNSSLDAERNCGATSDSSPSRNCSAETESNAASLIHFANCVLD 900
IHWRAIDSCVSVVEFLKKNSSLDAERNCGATSDSSPSRNCSAETESNAASLIHFANCVLD
Sbjct: 841 IHWRAIDSCVSVVEFLKKNSSLDAERNCGATSDSSPSRNCSAETESNAASLIHFANCVLD 900
Query: 901 VHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGIMLS 960
VHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGIMLS
Sbjct: 901 VHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGIMLS 960
Query: 961 YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAFRKPQMHVHMPPELVLSMDVPKG 1020
YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAFRKPQMHVHMPPELVLSMDVPKG
Sbjct: 961 YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAFRKPQMHVHMPPELVLSMDVPKG 1020
Query: 1021 VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL 1080
VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL
Sbjct: 1021 VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL 1080
Query: 1081 ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFD 1140
ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFD
Sbjct: 1081 ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFD 1140
Query: 1141 PRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC 1200
PRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC
Sbjct: 1141 PRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC 1200
Query: 1201 AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESK 1260
AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESK
Sbjct: 1201 AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESK 1260
Query: 1261 IGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGEL 1320
IGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGEL
Sbjct: 1261 IGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGEL 1320
Query: 1321 TDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQISEYVKYLSESHDAGKSLHGNKGP 1380
TDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQISEYVKYLSESHDAGKSLHGNKGP
Sbjct: 1321 TDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQISEYVKYLSESHDAGKSLHGNKGP 1380
Query: 1381 KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYF 1440
KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYF
Sbjct: 1381 KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYF 1440
Query: 1441 IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSG 1500
IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSG
Sbjct: 1441 IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSG 1500
Query: 1501 SKKRKQNPSCVEAAMVFSSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKLQW 1560
SKKRKQNPSCVEAAMVFSSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKLQW
Sbjct: 1501 SKKRKQNPSCVEAAMVFSSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKLQW 1560
Query: 1561 PMPTFNTVENKSRVLIDIGEGSERRKGFNSYLSSIILQIPNAGCIECKGDARADKKSSLD 1620
PMPTFNTVENKSRVLIDIGEGSERRKGFNSYLSSIILQIPNAGCIECKGDARADKKSSLD
Sbjct: 1561 PMPTFNTVENKSRVLIDIGEGSERRKGFNSYLSSIILQIPNAGCIECKGDARADKKSSLD 1620
Query: 1621 SASLVMLEELRQRGRVVINDS 1642
SASLVMLEELRQRGRVVINDS
Sbjct: 1621 SASLVMLEELRQRGRVVINDS 1641
BLAST of Carg27026 vs. NCBI nr
Match:
XP_022946818.1 (endoribonuclease Dicer homolog 3a isoform X1 [Cucurbita moschata])
HSP 1 Score: 3253.4 bits (8434), Expect = 0.0e+00
Identity = 1629/1641 (99.27%), Postives = 1635/1641 (99.63%), Query Frame = 0
Query: 1 MHNPEEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV 60
MHNPEEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVF+VGMKRNTIAV
Sbjct: 1 MHNPEEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFKVGMKRNTIAV 60
Query: 61 LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY 120
LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY
Sbjct: 61 LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY 120
Query: 121 GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP 180
GAMGVDDWN+NCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP
Sbjct: 121 GAMGVDDWNINCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP 180
Query: 181 YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE 240
YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE
Sbjct: 181 YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE 240
Query: 241 VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKA 300
VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKA
Sbjct: 241 VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKA 300
Query: 301 LKKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL 360
LKKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL
Sbjct: 301 LKKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL 360
Query: 361 RVIGESFPLGNENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII 420
RVIGESFPLGNENIPNFGFD QKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII
Sbjct: 361 RVIGESFPLGNENIPNFGFDCQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII 420
Query: 421 AANVIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE 480
AANVIE+FVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE
Sbjct: 421 AANVIEKFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE 480
Query: 481 EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR 540
EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR
Sbjct: 481 EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR 540
Query: 541 SMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASVTADYSVGLIHQYCKKLPGDKYFSP 600
SMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASVTAD SVGLIHQYCKKLPGDKYFSP
Sbjct: 541 SMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASVTADSSVGLIHQYCKKLPGDKYFSP 600
Query: 601 KPIFQLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH 660
KPIFQLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH
Sbjct: 601 KPIFQLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH 660
Query: 661 LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFD 720
LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFD
Sbjct: 661 LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFD 720
Query: 721 FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK 780
FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK
Sbjct: 721 FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK 780
Query: 781 CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWK 840
CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWK
Sbjct: 781 CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWK 840
Query: 841 IHWRAIDSCVSVVEFLKKNSSLDAERNCGATSDSSPSRNCSAETESNAASLIHFANCVLD 900
IHWRAIDSCVSVVEFLKKNSSLDAERNCGA SDSSPSRNCSAETESNAASLIHFANCVLD
Sbjct: 841 IHWRAIDSCVSVVEFLKKNSSLDAERNCGAISDSSPSRNCSAETESNAASLIHFANCVLD 900
Query: 901 VHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGIMLS 960
VHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGI LS
Sbjct: 901 VHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGITLS 960
Query: 961 YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAFRKPQMHVHMPPELVLSMDVPKG 1020
YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAFRKPQMHVHMPPELVLSMDVPKG
Sbjct: 961 YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAFRKPQMHVHMPPELVLSMDVPKG 1020
Query: 1021 VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL 1080
VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL
Sbjct: 1021 VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL 1080
Query: 1081 ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFD 1140
ELLGDSVLKYAVSCHLFLKFPEKHEGQLS RRQQVICNATLHALGTKCKLQGYIRDSAFD
Sbjct: 1081 ELLGDSVLKYAVSCHLFLKFPEKHEGQLSFRRQQVICNATLHALGTKCKLQGYIRDSAFD 1140
Query: 1141 PRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC 1200
PRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC
Sbjct: 1141 PRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC 1200
Query: 1201 AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESK 1260
AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESK
Sbjct: 1201 AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESK 1260
Query: 1261 IGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGEL 1320
IGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGEL
Sbjct: 1261 IGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGEL 1320
Query: 1321 TDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQISEYVKYLSESHDAGKSLHGNKGP 1380
TDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQI+EYVKYLSESHDAGKSLHGNKGP
Sbjct: 1321 TDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQITEYVKYLSESHDAGKSLHGNKGP 1380
Query: 1381 KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYF 1440
KVLGDMVESI+GAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYF
Sbjct: 1381 KVLGDMVESISGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYF 1440
Query: 1441 IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSG 1500
IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSG
Sbjct: 1441 IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSG 1500
Query: 1501 SKKRKQNPSCVEAAMVFSSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKLQW 1560
SKKRKQNPSCVEAAMV SSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKLQW
Sbjct: 1501 SKKRKQNPSCVEAAMVLSSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKLQW 1560
Query: 1561 PMPTFNTVENKSRVLIDIGEGSERRKGFNSYLSSIILQIPNAGCIECKGDARADKKSSLD 1620
PMPTFNTVENKSRVLIDIGEGSERRKGFNSYLSSIILQIPNAGCIECKGDARADKKSSLD
Sbjct: 1561 PMPTFNTVENKSRVLIDIGEGSERRKGFNSYLSSIILQIPNAGCIECKGDARADKKSSLD 1620
Query: 1621 SASLVMLEELRQRGRVVINDS 1642
SASLVMLEELRQRGRVVIND+
Sbjct: 1621 SASLVMLEELRQRGRVVINDA 1641
BLAST of Carg27026 vs. NCBI nr
Match:
KAG6599127.1 (Endoribonuclease Dicer-like 3a, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 3252.6 bits (8432), Expect = 0.0e+00
Identity = 1629/1641 (99.27%), Postives = 1634/1641 (99.57%), Query Frame = 0
Query: 1 MHNPEEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV 60
MHNPEEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV
Sbjct: 1 MHNPEEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV 60
Query: 61 LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY 120
LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY
Sbjct: 61 LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY 120
Query: 121 GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP 180
GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP
Sbjct: 121 GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP 180
Query: 181 YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE 240
YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE
Sbjct: 181 YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE 240
Query: 241 VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKA 300
VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSK+KA
Sbjct: 241 VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKIKA 300
Query: 301 LKKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL 360
LKKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL
Sbjct: 301 LKKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL 360
Query: 361 RVIGESFPLGNENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII 420
RVIGESFPLGNENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII
Sbjct: 361 RVIGESFPLGNENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII 420
Query: 421 AANVIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE 480
AANVIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE
Sbjct: 421 AANVIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE 480
Query: 481 EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR 540
EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR
Sbjct: 481 EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR 540
Query: 541 SMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASVTADYSVGLIHQYCKKLPGDKYFSP 600
SMTEAA SRDPDACMLKPFSIMETDSYIVEATGASVTAD SVGLIHQYCKKLPGDKYFSP
Sbjct: 541 SMTEAATSRDPDACMLKPFSIMETDSYIVEATGASVTADSSVGLIHQYCKKLPGDKYFSP 600
Query: 601 KPIFQLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH 660
KPIFQLSY EGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH
Sbjct: 601 KPIFQLSYGEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH 660
Query: 661 LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFD 720
LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTA+RALSGTWGEKVEGATFQAYKFD
Sbjct: 661 LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTALRALSGTWGEKVEGATFQAYKFD 720
Query: 721 FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK 780
FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK
Sbjct: 721 FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK 780
Query: 781 CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWK 840
CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWK
Sbjct: 781 CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWK 840
Query: 841 IHWRAIDSCVSVVEFLKKNSSLDAERNCGATSDSSPSRNCSAETESNAASLIHFANCVLD 900
IHWRAIDSCVSVVEFLKKNSSLDAERNCGA SDSSPSRNCSAETESNAASLIHFANCVLD
Sbjct: 841 IHWRAIDSCVSVVEFLKKNSSLDAERNCGAISDSSPSRNCSAETESNAASLIHFANCVLD 900
Query: 901 VHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGIMLS 960
VHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGI LS
Sbjct: 901 VHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGITLS 960
Query: 961 YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAFRKPQMHVHMPPELVLSMDVPKG 1020
YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAFRKPQMHVHMPPELVLSMDVPKG
Sbjct: 961 YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAFRKPQMHVHMPPELVLSMDVPKG 1020
Query: 1021 VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL 1080
VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL
Sbjct: 1021 VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL 1080
Query: 1081 ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFD 1140
ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFD
Sbjct: 1081 ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFD 1140
Query: 1141 PRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC 1200
PRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC
Sbjct: 1141 PRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC 1200
Query: 1201 AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESK 1260
AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESK
Sbjct: 1201 AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESK 1260
Query: 1261 IGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGEL 1320
IGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGEL
Sbjct: 1261 IGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGEL 1320
Query: 1321 TDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQISEYVKYLSESHDAGKSLHGNKGP 1380
TDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQI+EYVKYLSESHDAGKSLHGNKGP
Sbjct: 1321 TDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQITEYVKYLSESHDAGKSLHGNKGP 1380
Query: 1381 KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYF 1440
KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYF
Sbjct: 1381 KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYF 1440
Query: 1441 IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSG 1500
IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSG
Sbjct: 1441 IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSG 1500
Query: 1501 SKKRKQNPSCVEAAMVFSSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKLQW 1560
SKKRKQNPSCVEAAMV SSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKLQW
Sbjct: 1501 SKKRKQNPSCVEAAMVLSSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKLQW 1560
Query: 1561 PMPTFNTVENKSRVLIDIGEGSERRKGFNSYLSSIILQIPNAGCIECKGDARADKKSSLD 1620
PMPTFNTVENKSRVLIDIGEGSERRKGFNSYLS+IILQIPNAGCIECKGDARADKKSSLD
Sbjct: 1561 PMPTFNTVENKSRVLIDIGEGSERRKGFNSYLSNIILQIPNAGCIECKGDARADKKSSLD 1620
Query: 1621 SASLVMLEELRQRGRVVINDS 1642
SASL MLEELR+RGRVVINDS
Sbjct: 1621 SASLAMLEELRRRGRVVINDS 1641
BLAST of Carg27026 vs. NCBI nr
Match:
XP_023547257.1 (endoribonuclease Dicer homolog 3a isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 3228.0 bits (8368), Expect = 0.0e+00
Identity = 1618/1641 (98.60%), Postives = 1627/1641 (99.15%), Query Frame = 0
Query: 1 MHNPEEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV 60
MHNPEEENCDGARKR+FNDM+SSV SD+TNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV
Sbjct: 1 MHNPEEENCDGARKRNFNDMESSVASDQTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV 60
Query: 61 LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY 120
LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY
Sbjct: 61 LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY 120
Query: 121 GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP 180
GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP
Sbjct: 121 GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP 180
Query: 181 YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE 240
YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE
Sbjct: 181 YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE 240
Query: 241 VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKA 300
VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDT LSNSQVALQVHYKDVDSKLKA
Sbjct: 241 VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTLLSNSQVALQVHYKDVDSKLKA 300
Query: 301 LKKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL 360
LKKRLSSD FKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEE L
Sbjct: 301 LKKRLSSDRFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEEL 360
Query: 361 RVIGESFPLGNENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII 420
RVIGESFPLGNENIPNFGFD QKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII
Sbjct: 361 RVIGESFPLGNENIPNFGFDSQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII 420
Query: 421 AANVIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE 480
AANVIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE
Sbjct: 421 AANVIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE 480
Query: 481 EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR 540
EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR
Sbjct: 481 EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR 540
Query: 541 SMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASVTADYSVGLIHQYCKKLPGDKYFSP 600
SMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASVTAD SVGLIH YCKKLPGDKYFSP
Sbjct: 541 SMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASVTADSSVGLIHLYCKKLPGDKYFSP 600
Query: 601 KPIFQLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH 660
KPIFQLSY EGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH
Sbjct: 601 KPIFQLSYGEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH 660
Query: 661 LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFD 720
LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFD
Sbjct: 661 LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFD 720
Query: 721 FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK 780
FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK
Sbjct: 721 FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK 780
Query: 781 CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWK 840
CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDD+WK
Sbjct: 781 CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDLWK 840
Query: 841 IHWRAIDSCVSVVEFLKKNSSLDAERNCGATSDSSPSRNCSAETESNAASLIHFANCVLD 900
IHW AIDSCVSVVEFLKKNSSLDAERNCGA SDSSPSRNCSAETESNAASLIHFANCVLD
Sbjct: 841 IHWTAIDSCVSVVEFLKKNSSLDAERNCGAISDSSPSRNCSAETESNAASLIHFANCVLD 900
Query: 901 VHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGIMLS 960
VHSLKDRVVLAIHTGKIYSIVEVVNN+SAESPFDGNSDKAPPDYITFADYFNKRYGI LS
Sbjct: 901 VHSLKDRVVLAIHTGKIYSIVEVVNNTSAESPFDGNSDKAPPDYITFADYFNKRYGITLS 960
Query: 961 YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAFRKPQMHVHMPPELVLSMDVPKG 1020
YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSA RKPQMHVHMPPELVLSMDVPKG
Sbjct: 961 YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAVRKPQMHVHMPPELVLSMDVPKG 1020
Query: 1021 VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL 1080
VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL
Sbjct: 1021 VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL 1080
Query: 1081 ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFD 1140
ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFD
Sbjct: 1081 ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFD 1140
Query: 1141 PRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC 1200
PRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC
Sbjct: 1141 PRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC 1200
Query: 1201 AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESK 1260
AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESK
Sbjct: 1201 AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESK 1260
Query: 1261 IGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGEL 1320
IGYEFAVKGLLLEAITHTSDQ LGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGEL
Sbjct: 1261 IGYEFAVKGLLLEAITHTSDQELGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGEL 1320
Query: 1321 TDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQISEYVKYLSESHDAGKSLHGNKGP 1380
TDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQI+EYVKYLSESHDAGKSLHGNKGP
Sbjct: 1321 TDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQITEYVKYLSESHDAGKSLHGNKGP 1380
Query: 1381 KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYF 1440
KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYF
Sbjct: 1381 KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYF 1440
Query: 1441 IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSG 1500
IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQR+LVQLETRGISYSRSG
Sbjct: 1441 IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRLLVQLETRGISYSRSG 1500
Query: 1501 SKKRKQNPSCVEAAMVFSSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKLQW 1560
SKKRKQNPSCVEAAMV SSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKLQW
Sbjct: 1501 SKKRKQNPSCVEAAMVLSSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKLQW 1560
Query: 1561 PMPTFNTVENKSRVLIDIGEGSERRKGFNSYLSSIILQIPNAGCIECKGDARADKKSSLD 1620
PMPTFNTVENKSRVLIDIGEGSERRKGFNSYLS+IILQIPNAGCIECKGDARADKKSSLD
Sbjct: 1561 PMPTFNTVENKSRVLIDIGEGSERRKGFNSYLSNIILQIPNAGCIECKGDARADKKSSLD 1620
Query: 1621 SASLVMLEELRQRGRVVINDS 1642
SASLVMLEELR+RGRVVINDS
Sbjct: 1621 SASLVMLEELRRRGRVVINDS 1641
BLAST of Carg27026 vs. NCBI nr
Match:
XP_022999593.1 (endoribonuclease Dicer homolog 3 isoform X1 [Cucurbita maxima])
HSP 1 Score: 3208.7 bits (8318), Expect = 0.0e+00
Identity = 1606/1641 (97.87%), Postives = 1624/1641 (98.96%), Query Frame = 0
Query: 1 MHNPEEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV 60
M+NP EENCDGARKRSFNDM+SSVTSD+TNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV
Sbjct: 1 MYNPVEENCDGARKRSFNDMESSVTSDQTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV 60
Query: 61 LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY 120
LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY
Sbjct: 61 LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY 120
Query: 121 GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP 180
GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP
Sbjct: 121 GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP 180
Query: 181 YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE 240
YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE
Sbjct: 181 YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE 240
Query: 241 VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKA 300
VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDT LSNSQVALQVHYKDVDSKLKA
Sbjct: 241 VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTLLSNSQVALQVHYKDVDSKLKA 300
Query: 301 LKKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL 360
L+KRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL
Sbjct: 301 LRKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL 360
Query: 361 RVIGESFPLGNENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII 420
RVIGES PLG+ENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCL+FVERII
Sbjct: 361 RVIGESLPLGHENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLVFVERII 420
Query: 421 AANVIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE 480
AANVIERFV+KVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE
Sbjct: 421 AANVIERFVRKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE 480
Query: 481 EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR 540
EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR
Sbjct: 481 EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR 540
Query: 541 SMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASVTADYSVGLIHQYCKKLPGDKYFSP 600
SMTEAAMSRDPDACMLKPFSIMETD YIVEATGASVTAD SVGLIHQYCKKLPGDKYFSP
Sbjct: 541 SMTEAAMSRDPDACMLKPFSIMETDCYIVEATGASVTADSSVGLIHQYCKKLPGDKYFSP 600
Query: 601 KPIFQLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH 660
KPIFQLSY EGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH
Sbjct: 601 KPIFQLSYGEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH 660
Query: 661 LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFD 720
LLPSIEEISEFDMGL+CNASTSGAGTTKRKELHGRT IRALSGTWGEKVEGATFQAYKFD
Sbjct: 661 LLPSIEEISEFDMGLRCNASTSGAGTTKRKELHGRTTIRALSGTWGEKVEGATFQAYKFD 720
Query: 721 FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK 780
FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVH+DAEQIMKAK
Sbjct: 721 FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHMDAEQIMKAK 780
Query: 781 CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWK 840
CFQELFFNGLFGRLLIGSKLTGKKRDFLL KDTKPLWITSNMYLLLPVDSPDASSDD+WK
Sbjct: 781 CFQELFFNGLFGRLLIGSKLTGKKRDFLLLKDTKPLWITSNMYLLLPVDSPDASSDDLWK 840
Query: 841 IHWRAIDSCVSVVEFLKKNSSLDAERNCGATSDSSPSRNCSAETESNAASLIHFANCVLD 900
IHWRAIDSCVSVVEFLKKNSSLDAERNCGA SDSSPSRNCSAETESNAASLIHFANCVLD
Sbjct: 841 IHWRAIDSCVSVVEFLKKNSSLDAERNCGAISDSSPSRNCSAETESNAASLIHFANCVLD 900
Query: 901 VHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGIMLS 960
VHSLKDRVVLAIHTGKIYSIVEVVNN+SAESPFDGNSDKAPPDYITFADYFNKRYGI LS
Sbjct: 901 VHSLKDRVVLAIHTGKIYSIVEVVNNTSAESPFDGNSDKAPPDYITFADYFNKRYGITLS 960
Query: 961 YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAFRKPQMHVHMPPELVLSMDVPKG 1020
YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSA RKPQMHVHMPPELVLSMDVPKG
Sbjct: 961 YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAVRKPQMHVHMPPELVLSMDVPKG 1020
Query: 1021 VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL 1080
VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL
Sbjct: 1021 VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL 1080
Query: 1081 ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFD 1140
ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFD
Sbjct: 1081 ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFD 1140
Query: 1141 PRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC 1200
PRRWVAPGH TLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC
Sbjct: 1141 PRRWVAPGHGTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC 1200
Query: 1201 AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESK 1260
AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAI SASLRSCNLKDTEIATLESK
Sbjct: 1201 AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAITSASLRSCNLKDTEIATLESK 1260
Query: 1261 IGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGEL 1320
IGYEF+VKGLLLEAITHTSDQ LGVNYCYQRLEFLGDSVLDLLITWYYYQKY DIDPGEL
Sbjct: 1261 IGYEFSVKGLLLEAITHTSDQELGVNYCYQRLEFLGDSVLDLLITWYYYQKYPDIDPGEL 1320
Query: 1321 TDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQISEYVKYLSESHDAGKSLHGNKGP 1380
TDLRSASVNN+TFAQVAVRRNLQQHLQHCSGLLISQI+EYVKYLSESHDAGKSLHGNKGP
Sbjct: 1321 TDLRSASVNNKTFAQVAVRRNLQQHLQHCSGLLISQITEYVKYLSESHDAGKSLHGNKGP 1380
Query: 1381 KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYF 1440
KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLREL ELCDSLGYF
Sbjct: 1381 KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELNELCDSLGYF 1440
Query: 1441 IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSG 1500
IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQR+LVQLETRGISYSRSG
Sbjct: 1441 IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRLLVQLETRGISYSRSG 1500
Query: 1501 SKKRKQNPSCVEAAMVFSSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKLQW 1560
SKKRKQNPSCVEAAMV SSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKLQW
Sbjct: 1501 SKKRKQNPSCVEAAMVLSSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKLQW 1560
Query: 1561 PMPTFNTVENKSRVLIDIGEGSERRKGFNSYLSSIILQIPNAGCIECKGDARADKKSSLD 1620
PMPTFNTVE+KSRVLIDIGEGSERRKGFNSYLS+IILQIPNAGCIECKGDARADKKSSLD
Sbjct: 1561 PMPTFNTVEHKSRVLIDIGEGSERRKGFNSYLSNIILQIPNAGCIECKGDARADKKSSLD 1620
Query: 1621 SASLVMLEELRQRGRVVINDS 1642
SASLVMLEELRQ+GRVVINDS
Sbjct: 1621 SASLVMLEELRQQGRVVINDS 1641
BLAST of Carg27026 vs. ExPASy Swiss-Prot
Match:
Q5N870 (Endoribonuclease Dicer homolog 3a OS=Oryza sativa subsp. japonica OX=39947 GN=DCL3A PE=2 SV=1)
HSP 1 Score: 1550.8 bits (4014), Expect = 0.0e+00
Identity = 840/1669 (50.33%), Postives = 1103/1669 (66.09%), Query Frame = 0
Query: 14 KRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAVLETGAGKTMIAVM 73
KRS + K K + F PRRYQ++V+EV M+RNTIA+L+TGAGKTMIAVM
Sbjct: 5 KRSLESSSQEHEAGKQKLQKRECQDFTPRRYQLDVYEVAMRRNTIAMLDTGAGKTMIAVM 64
Query: 74 LIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYYGAMGVDDWNMNCW 133
LIKE GK ++ K IIFLAPTV LV QQ VI++ TDFEV +YYGA GVD W W
Sbjct: 65 LIKEFGKINRTKNAGKVIIFLAPTVQLVTQQCEVIEIHTDFEVEQYYGAKGVDQWTGPRW 124
Query: 134 EKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHPYTKIMKEFYHKSD 193
+++ S+ V+VMTPQ+ L ALR A+ L V LMI DECH ATGNHPYT+IMKEFYHKS+
Sbjct: 125 QEQISKYQVMVMTPQVFLQALRNAFLILDMVSLMIFDECHHATGNHPYTRIMKEFYHKSE 184
Query: 194 NKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKEVEIYVPSAKETCI 253
+KP +FGMTASPVIRKG+SS LDCE Q ELE++LD+KIY + D++E+E VPSAKE C
Sbjct: 185 HKPSVFGMTASPVIRKGISSHLDCEGQFCELENLLDAKIYTVSDREEIEFCVPSAKEMCR 244
Query: 254 FYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKALKKRLSSDHFKIS 313
+Y+ +L ++ L SK+D ++ Q YKD D K K+RLS KI
Sbjct: 245 YYDSKPVCFEDLSEELGVLCSKYDALITELQNKRSDMYKDADDITKESKRRLSKSIAKIC 304
Query: 314 YCLDELGVLCAYEAIKVLLE---------------NVNIPNNEYELSRESSLQYKQFLEE 373
YCLD++G++CA EA K+ +E + N L E+S + +F EE
Sbjct: 305 YCLDDVGLICASEATKICIERGQEKGWLKEVVDATDQQTDANGSRLFAENSALHMKFFEE 364
Query: 374 ALRVIGESFPLGNENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVER 433
AL +I + G + + N +A GYISPKL+EL+Q+F SF SR CLIFV+R
Sbjct: 365 ALHLIDKRLQQGIDMLLNSESGCVEAAKTGYISPKLYELIQIFHSFSNSRHARCLIFVDR 424
Query: 434 IIAANVIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDV 493
I A VI+R +KK+ +L+HFTVS++TG +SV AL PK+QK+TL+ FR GKVNLLF+TDV
Sbjct: 425 KITARVIDRMIKKIGHLAHFTVSFLTGGRSSVDALTPKMQKDTLDSFRSGKVNLLFTTDV 484
Query: 494 VEEGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRS 553
EEG+HVP CS V+RFDLP+T RSYVQSRGRARQ +SQYIL++ERGNVKQ + + ++RS
Sbjct: 485 AEEGIHVPECSCVIRFDLPRTTRSYVQSRGRARQEDSQYILMIERGNVKQNDLISAIVRS 544
Query: 554 DRSMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASVTADYSVGLIHQYCKKLPGDKYF 613
+ SM + A SR+ E + Y V TGA VTAD S+ ++++YC+KLP DK +
Sbjct: 545 ETSMVKIASSRESGNLSPGFVPNEEINEYHVGTTGAKVTADSSISIVYRYCEKLPQDKCY 604
Query: 614 SPKPIFQLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALN 673
SPKP F+ ++ + Y C L LPP+A Q +VGP RN + +KQLVCL+ACKKLH++GAL+
Sbjct: 605 SPKPTFEFTHHDDGYVCTLALPPSAVLQILVGPKARNMHKAKQLVCLDACKKLHELGALD 664
Query: 674 DHLLPSIEE-ISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAY 733
DHL S+E+ + E + N T G GTTKRKELHG T I A SG W K Q+Y
Sbjct: 665 DHLCLSVEDPVPEI---VSKNKGT-GIGTTKRKELHGTTRIHAWSGNWVSKKTALKLQSY 724
Query: 734 KFDFSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIM 793
K +F C + +S FVLL+++ L D+V E++LYL KMVK SVS G + LDA+Q+
Sbjct: 725 KMNFVCDQAGQIYSEFVLLIDATLPDEVATLEIDLYLHDKMVKTSVSSCGLLELDAQQME 784
Query: 794 KAKCFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDD 853
+AK FQ L FNGLFG+L SK+ R+F+L K+ +W T+++YLLLP + S D
Sbjct: 785 QAKLFQGLLFNGLFGKLFTRSKVPNAPREFILNKEDTFVWNTASVYLLLPT---NPSFDS 844
Query: 854 IWKIHWRAIDSCVSVVEFLKKNSSLDAERNCGATSDSSPSRNCSAETESNAASLIHFANC 913
I+W ID+ + V+ +++ S + G +++ N LIH AN
Sbjct: 845 NVCINWSVIDAAATAVKLMRRIYSENKRELLGI-----------FDSDQNVGDLIHLANK 904
Query: 914 VLDVHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGI 973
+SLKD VVLA+HTGKIY+ ++ + S +S FDG SDK + TFA+YF K+YGI
Sbjct: 905 SCKANSLKDMVVLAVHTGKIYTALD-ITELSGDSAFDGASDKKECKFRTFAEYFKKKYGI 964
Query: 974 MLSYPQQPLLRLKQSHNPHNLLVN-FKDEGVTSDKLQSGS-AFRKPQMHVHMPPELVLSM 1033
+L +P QPLL LK SHNPHNLL + F+DEG + + +G+ K VHMPPEL++ +
Sbjct: 965 VLRHPSQPLLVLKPSHNPHNLLSSKFRDEGNVVENMSNGTPVVNKTSNRVHMPPELLIPL 1024
Query: 1034 DVPKGVLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESF 1093
D+P +L+S YL P+LM+R ESL LASQLR EI Y ++ ISS LILEA+TTL E F
Sbjct: 1025 DLPVEILRSFYLFPALMYRIESLTLASQLRSEIGYSDSN--ISSFLILEAITTLRCSEDF 1084
Query: 1094 SFERLELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIR 1153
S ERLELLGDSVLKYAVSCHLFLKFP K EGQLSS R +ICNATL+ LG + +QGY+R
Sbjct: 1085 SMERLELLGDSVLKYAVSCHLFLKFPNKDEGQLSSIRCHMICNATLYKLGIERNVQGYVR 1144
Query: 1154 DSAFDPRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSK 1213
D+AFDPRRW+APG ++RP PC+C V +EV DD +D +VLGK CDKGHRW+ SK
Sbjct: 1145 DAAFDPRRWLAPGQLSIRPSPCECPV-KSEVVTDDIHIIDDKAIVLGKACDKGHRWMCSK 1204
Query: 1214 TIADCAEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIA 1273
TIADC EA+IGAYY GG+ AA+ V+KWLGI A+++ L+V AI SAS+++ KD
Sbjct: 1205 TIADCVEAIIGAYYAGGGLRAAMAVLKWLGIGAEIEEDLIVQAILSASVQTYLPKDNVFE 1264
Query: 1274 TLESKIGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDI 1333
LE+K+GY F+VKGLL+EA+TH S Q LG YCY+RLEFLGD+VLD+L+T Y + + D
Sbjct: 1265 MLEAKLGYSFSVKGLLVEALTHPSQQELGAKYCYERLEFLGDAVLDILLTRYLFNSHKDT 1324
Query: 1334 DPGELTDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQISEYVKYL-SESHDAGKSL 1393
+ GELTDLRSASVNNE FAQVAV+ N LQH SGLL+ QI+EYV L S D + L
Sbjct: 1325 NEGELTDLRSASVNNENFAQVAVKHNFHHFLQHSSGLLLDQITEYVNRLEGSSMDKVELL 1384
Query: 1394 HGN--KGPKVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIE 1453
KGPKVLGD+VESIAGAIL+DTKL+LD VW I++PLL+P+VTP+ LELPP RELIE
Sbjct: 1385 SDGLPKGPKVLGDIVESIAGAILLDTKLDLDVVWGIFEPLLSPIVTPENLELPPYRELIE 1444
Query: 1454 LCDSLGYFIKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETR 1513
C GYF+ C +G+ A L +QL++VLLV +G+ + RK ++ A+ +L LE +
Sbjct: 1445 WCGKHGYFVGINCRDQGDTVVATLDVQLKEVLLVRQGFSKKRKDAKAHASSLLLKDLEEK 1504
Query: 1514 GISYSRSGSKKRKQNPSC----------VEAAMVFSSSINCSTDACDP-NSETPVIGP-- 1573
G+ ++ SK + C V+A + +A D N P++G
Sbjct: 1505 GLIIPKNASKTEQFEKHCGSTNPFNNLHVDAMDTQTPKPTKEKNAADSRNISDPLLGKPL 1564
Query: 1574 ---INLKKGGPRSTLFELCKKLQWPMPTFNTVE---NKSRVLIDIGEGSERR--KGFNSY 1633
+ KGGPR L+ELCKKLQWPMPT + + + S V G S++ + F ++
Sbjct: 1565 HVIVKTSKGGPRIALYELCKKLQWPMPTMESEKVQPSFSSVCSSPGGSSQKATPQAF-AF 1624
Query: 1634 LSSIILQIPNAGCIECKGDARADKKSSLDSASLVMLEELRQRGRVVIND 1641
S+I L IPNA I GD RADKKSS DSA+L +L EL++RG + + +
Sbjct: 1625 ASTITLHIPNADVISLTGDGRADKKSSQDSAALFLLYELQRRGTLQLQE 1650
BLAST of Carg27026 vs. ExPASy Swiss-Prot
Match:
Q9LXW7 (Endoribonuclease Dicer homolog 3 OS=Arabidopsis thaliana OX=3702 GN=DCL3 PE=1 SV=2)
HSP 1 Score: 1490.3 bits (3857), Expect = 0.0e+00
Identity = 822/1637 (50.21%), Postives = 1084/1637 (66.22%), Query Frame = 0
Query: 5 EEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAVLETG 64
EE + KR F+++ D + D Y+++V+EV RN IAVL TG
Sbjct: 11 EEGGGSNSLKRKFSEIDGDQNLDSVSSPMMTDSN---GSYELKVYEVAKNRNIIAVLGTG 70
Query: 65 AGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYYGAMG 124
K+ I LIK +G S DK+ IIFLAPTV+LV QQ I+ + +V EY+GA G
Sbjct: 71 IDKSEITKRLIKAMG---SSDTDKRLIIFLAPTVNLVKQQCCEIRALVNLKVEEYFGAKG 130
Query: 125 VDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHPYTKI 184
VD W W++E S+ DVLVMTPQILLD LR A+ +L VCL+I+DECH TGNHPY K+
Sbjct: 131 VDKWTSQRWDEEFSKHDVLVMTPQILLDVLRSAFLKLEMVCLLIIDECHHTTGNHPYAKL 190
Query: 185 MKEFYHKSDNKPKIFGMTASPVIRKG-VSSSLDCECQIGELESILDSKIYAIEDKKEVEI 244
MKEFYH+S +KPKIFG+TAS VIRKG VSS + Q+ ELE ++DSKI+ E+++ VE
Sbjct: 191 MKEFYHESTSKPKIFGLTASAVIRKGIVSSPSNYAAQVSELERLMDSKIFNPEEREGVEK 250
Query: 245 YVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKALKK 304
+ + KE I Y P+ S +LELK K+E KFD SL Q + + ++D+K + +K
Sbjct: 251 FATTVKEGPILYNPSPSCSLELKEKLETSHLKFDASLRRLQELGKDSFLNMDNKFETYQK 310
Query: 305 RLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEALRVI 364
RLS D+ +I +CLD LG++CA+ A +V LE ++ E E +E S+ K+FLE+ L I
Sbjct: 311 RLSIDYREILHCLDNLGLICAHLAAEVCLEKISDTKEESETYKECSMVCKEFLEDILSTI 370
Query: 365 GESFPLGNENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERIIAAN 424
G P ++++ + + AV G++SPKL EL L +SF +Q CLI VERII A
Sbjct: 371 GVYLPQDDKSLVDLQQNHLSAVISGHVSPKLKELFHLLDSFRGDKQKQCLILVERIITAK 430
Query: 425 VIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVEEGL 484
VIERFVKK A+L++ V Y+T N S A K+Q E +LF+HGKVNLLF TDVVEEG
Sbjct: 431 VIERFVKKEASLAYLNVLYLTENNPSTNVSAQKMQIEIPDLFQHGKVNLLFITDVVEEGF 490
Query: 485 HVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDRSMT 544
VP+CS +V FDLPKT+ SY QS+ A+QSNS+ I+ LERGN KQR+ L D++R +
Sbjct: 491 QVPDCSCMVCFDLPKTMCSYSQSQKHAKQSNSKSIMFLERGNPKQRDHLHDLMRRE---- 550
Query: 545 EAAMSRDPDACMLKPFSIMETDSYIVEATGASVTADYSVGLIHQYCKKLPGDKYFSPKPI 604
+ +DP+A LK + + V+ G+ V D ++ + +
Sbjct: 551 --VLIQDPEAPNLKSCPPPVKNGHGVKEIGSMVIPDSNITVSEE---------------- 610
Query: 605 FQLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDHLLP 664
A+ QT+ P +RN L CKKL L+++LL
Sbjct: 611 ------------------AASTQTMSDPPSRNEQ-------LPPCKKLR----LDNNLLQ 670
Query: 665 SIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFDFSC 724
S E K +S+S AG+ KRKELHG T ALSGTWGE ++GATFQAYKFDF C
Sbjct: 671 S--NGKEKVASSKSKSSSSAAGSKKRKELHGTTCANALSGTWGENIDGATFQAYKFDFCC 730
Query: 725 SVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAKCFQ 784
++ E +S F LLLES L +DVG E++LYL+ K+VKASVS GQ+ L E+++KAK FQ
Sbjct: 731 NISGEVYSSFSLLLESTLAEDVGKVEMDLYLVRKLVKASVSPCGQIRLSQEELVKAKYFQ 790
Query: 785 ELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWKIHW 844
+ FFNG+FG+L +GSK G KR+FLLQ DT LW + M+LLLPV++ D +S I W
Sbjct: 791 QFFFNGMFGKLFVGSKSQGTKREFLLQTDTSSLWHPAFMFLLLPVETNDLASSA--TIDW 850
Query: 845 RAIDSCVSVVEFLKKNSSLDAERNCGATSDSSPSRNCSAETESNAASLIHFANCVLDVHS 904
AI+SC S+VEFLKKNS LD + G ++S + + + +LIHFAN D +S
Sbjct: 851 SAINSCASIVEFLKKNSLLDLRDSDGNQCNTSSGQEVLLDDKMEETNLIHFANASSDKNS 910
Query: 905 LKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGIMLSYPQ 964
L++ VV+AIHTG+IYSIVE V++SSA SPF+ + A Y T+A+YFNK+YGI+L++P
Sbjct: 911 LEELVVIAIHTGRIYSIVEAVSDSSAMSPFEVD---ASSGYATYAEYFNKKYGIVLAHPN 970
Query: 965 QPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSA-FRKPQMHVHMPPELVLSMDVPKGVL 1024
QPL++LKQSH+ HNLLV+F +E V + ++G+ RKP +H H+PPEL+ +DVP+ VL
Sbjct: 971 QPLMKLKQSHHAHNLLVDFNEEMVVKTEPKAGNVRKRKPNIHAHLPPELLARIDVPRAVL 1030
Query: 1025 KSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERLEL 1084
KS YLLPS+MHR ESLMLASQLR+EI+ ++ ISS+ ILEA+TTL ESFS ERLEL
Sbjct: 1031 KSIYLLPSVMHRLESLMLASQLREEIDCSIDNFSISSTSILEAVTTLTCPESFSMERLEL 1090
Query: 1085 LGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFDPR 1144
LGDSVLKY SCHLFLK+P+K EGQLS +RQ +I N+ LH L T KLQGYIR+ AF+PR
Sbjct: 1091 LGDSVLKYVASCHLFLKYPDKDEGQLSRQRQSIISNSNLHRLTTSRKLQGYIRNGAFEPR 1150
Query: 1145 RWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADCAE 1204
RW APG +L PVPCKCG+DT EVPLD KF +E+ + +GK CD GHRW+VSK+++DCAE
Sbjct: 1151 RWTAPGQFSLFPVPCKCGIDTREVPLDPKFFTENMTIKIGKSCDMGHRWVVSKSVSDCAE 1210
Query: 1205 ALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESKIG 1264
ALIGAYYV GG+ A+LH++KWLGID D D LVV+AI SLR K+ E+ LE KI
Sbjct: 1211 ALIGAYYVSGGLSASLHMMKWLGIDVDFDPNLVVEAINRVSLRCYIPKEDELIELERKIQ 1270
Query: 1265 YEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGELTD 1324
+EF+ K LL EAITH+S L +Y Y+RLEFLGDSVLD LIT + + Y PGE+TD
Sbjct: 1271 HEFSAKFLLKEAITHSS---LRESYSYERLEFLGDSVLDFLITRHLFNTYEQTGPGEMTD 1330
Query: 1325 LRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQISEYVKYLSESHDAGKSLHGNKGPKV 1384
LRSA VNNE FAQVAV+ NL HLQ C+ +L +QI++Y+ + + G+S+ +GPK
Sbjct: 1331 LRSACVNNENFAQVAVKNNLHTHLQRCATVLETQINDYLMSFQKPDETGRSIPSIQGPKA 1390
Query: 1385 LGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYFIK 1444
LGD+VESIAGA+LIDT+L+LD+VW++++PLL+PLVTPDKL+LPP REL ELCDSLGYF +
Sbjct: 1391 LGDVVESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQLPPYRELNELCDSLGYFFR 1450
Query: 1445 DKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSGSK 1504
KC+ G A ++LQL DVLL G+G E+T K + G+AA +L QLE R I SR S
Sbjct: 1451 VKCSNDGVKAQATIQLQLDDVLLTGDGSEQTNKLALGKAASHLLTQLEKRNI--SRKTSL 1510
Query: 1505 KRKQNPSCVEAAMVFSSSINCSTDACDPNS-ETPVIGPINLKKGGPRSTLFELCKKLQWP 1564
Q+ V A S +++ + S P IGPIN+KKGGPR TL E CKK WP
Sbjct: 1511 GDNQSSMDVNLACNHSDRETLTSETTEIQSIVIPFIGPINMKKGGPRGTLHEFCKKHLWP 1570
Query: 1565 MPTFNTVENKSRVLIDIGEGSERRKGFNSYLSSIILQIPNAGCIECKGDARADKKSSLDS 1624
MPTF+T E KSR + +G E+R F+S+ S+I L+IPN + G+AR DKKSS DS
Sbjct: 1571 MPTFDTSEEKSRTPFEFIDGGEKRTSFSSFTSTITLRIPNREAVMYAGEARPDKKSSFDS 1578
Query: 1625 ASLVMLEELRQRGRVVI 1639
A + +L EL +R V+I
Sbjct: 1631 AVVELLYELERRKIVII 1578
BLAST of Carg27026 vs. ExPASy Swiss-Prot
Match:
Q7XD96 (Endoribonuclease Dicer homolog 3b OS=Oryza sativa subsp. japonica OX=39947 GN=DCL3B PE=3 SV=2)
HSP 1 Score: 1467.6 bits (3798), Expect = 0.0e+00
Identity = 783/1611 (48.60%), Postives = 1076/1611 (66.79%), Query Frame = 0
Query: 41 PRRYQM-EVFEVGMKRNTIAVLETGAGKTMIAVMLIKEIGKAMKS-SGDKKFIIFLAPTV 100
PR Q+ EVFE ++ NTIAVL+TG+GKTM+AVML +E + +++ ++ ++FLAPTV
Sbjct: 38 PRTSQLVEVFEAALRGNTIAVLDTGSGKTMVAVMLAREHARRVRAGEAPRRIVVFLAPTV 97
Query: 101 HLVHQQFNVIKVQTDFEVAEYYGAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAY 160
HLVHQQF VI+ TD +V GA V +W + W++E +++VMTPQILLDALR A+
Sbjct: 98 HLVHQQFEVIREYTDLDVMMCSGASRVGEWGADHWKEEVGRNEIVVMTPQILLDALRHAF 157
Query: 161 FRLGTVCLMIMDECHRATGNHPYTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCE 220
+ V L+I DECHRA G+HPY +IMKEFY S +P +FGMTASPV KG S+ +CE
Sbjct: 158 LTMSAVSLLIFDECHRACGSHPYARIMKEFYFGSQWRPDVFGMTASPVATKGASTLHNCE 217
Query: 221 CQIGELESILDSKIYAIEDKKEVEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDT 280
I +LE LD+KIY +ED+ E+E + P +Y+ LK+K++ +FD+
Sbjct: 218 AHISQLELTLDAKIYIVEDRNELESFSPPTTIVNKYYDAYMVDFDNLKSKLQIFSDEFDS 277
Query: 281 SLSNSQVALQVHYKDVDSKLKALKKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVN-- 340
L Q + +KD D+ L+ +K LS H KI Y L++LG + E +K+ +E+V
Sbjct: 278 LLVGLQESPSNKFKDTDNILETSRKSLSRYHGKILYSLNDLGPIITSEVVKIHIESVKPL 337
Query: 341 IPNNEYELSRESSLQYKQFLEEALRVIGESFPLGNENIPNFGFDFQKAVDLGYISPKLFE 400
+ + S+ S + + +EAL +I E P G + ++ GYIS K+
Sbjct: 338 CDSEDCIFSKASLCLHMSYFKEALSLIEEILPQGYGELMKSESGSEELTKRGYISSKVNT 397
Query: 401 LLQLFESFGVSRQVLCLIFVERIIAANVIERFVKKVANLSHFTVSYVTGCNTSVGALAPK 460
L+ +F+SFG S +VLCLIFV+RII A +ERF++ + N S F++SY+TG +TS AL+P
Sbjct: 398 LINIFKSFGSSNEVLCLIFVDRIITAKAVERFMRGIVNFSCFSISYLTGGSTSKDALSPA 457
Query: 461 VQKETLELFRHGKVNLLFSTDVVEEGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQ 520
VQ+ TL+LFR GKVNLLF+TDV EEG+ VPNCS V+RFDLP+TV SYVQSRGRAR++NS+
Sbjct: 458 VQRFTLDLFRAGKVNLLFTTDVTEEGVDVPNCSCVIRFDLPRTVCSYVQSRGRARRNNSE 517
Query: 521 YILLLERGNVKQREQLFDVIRSDRSMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASV 580
+IL++ERGN++Q+E +F +I++ + A+ R P+A + SI +Y V++TGA++
Sbjct: 518 FILMIERGNLQQQEHIFRMIQTGYYVKNCALYRHPNA-LSYDLSIQGMYTYQVQSTGATI 577
Query: 581 TADYSVGLIHQYCKKLPGDKYFSPKPIFQLSYCEGSYECRLILPPTAAFQTIVGPSTRNS 640
TAD V LI +YC+KLP D+YF PKP F+++ +G ++C L LP AAFQ+IVGP + +S
Sbjct: 578 TADCCVNLIRKYCEKLPKDRYFMPKPSFEVTIEDGLFKCTLTLPRNAAFQSIVGPLSSSS 637
Query: 641 NLSKQLVCLEACKKLHQMGALNDHLLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRT 700
NLSKQLV LEACKKLHQ+G LNDHL+P EE + D SG GTTKRKELHG T
Sbjct: 638 NLSKQLVSLEACKKLHQLGELNDHLVPLTEEPMDTDFTTADEKCISGPGTTKRKELHGTT 697
Query: 701 AIRALSGTWGEKVEGATFQAYKFDFSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLI- 760
+ ALSGTW E T Y+ DF C E+++GFVLL+E +LDDDV +++L+LI
Sbjct: 698 CVLALSGTWIHDSENITLNTYRIDFLCDQEGENYAGFVLLMEPELDDDVAPSKMDLFLIP 757
Query: 761 SKMVKASVSFAGQVHLDAEQIMKAKCFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKP 820
+KMV +V+ G+V L+ +Q+ K K FQE FFNG+FGRL GS+ +G +RDF+ +K +
Sbjct: 758 NKMVYTTVTPRGKVQLNKKQLGKGKLFQEFFFNGIFGRLFHGSRKSGAQRDFIFKKGHEI 817
Query: 821 LWITSNMYLLLPVDSPDASSDDIWKIHWRAIDSCVSVVEFLKKNSSLDAERNCGATSDSS 880
W T +MYLLLP+ DD+ IHW AI+SC VE L SS + N
Sbjct: 818 QWNTESMYLLLPLRDSSYIQDDL-SIHWEAIESCAGAVEQLW--SSYQGDENV------I 877
Query: 881 PSRNCSAETESNAASLIHFANCVLDVHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDG 940
P + +IH AN L S+KD VVL++HTG+IY++++++ +++AE FD
Sbjct: 878 PVNCIPQKRRGGQEEIIHLANKSLHCSSIKDSVVLSLHTGRIYTVLDLILDTTAEDSFDE 937
Query: 941 NSDKAPPDYITFADYFNKRYGIMLSYPQQPLLRLKQSHNPHNLLVNFKD--EGVTSDKLQ 1000
+ +F DY++++YGI++ +P+QPLL LKQSHN HNLL + +G T L
Sbjct: 938 MCKGKASPFTSFVDYYHQKYGIIIQHPEQPLLLLKQSHNAHNLLFSKLKYLDGSTGKPL- 997
Query: 1001 SGSAFRKPQMHVHMPPELVLSMDVPKGVLKSSYLLPSLMHRFESLMLASQLRKEINYHSN 1060
K Q+H +PPEL++ +DV +LKS YLLPS++HR +SLMLASQLR+EI Y+ +
Sbjct: 998 ---LMEKEQIHARVPPELLIHLDVTTDILKSFYLLPSVIHRLQSLMLASQLRREIGYNQH 1057
Query: 1061 SLCISSSLILEALTTLGSCESFSFERLELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQ 1120
I +LILEA+TTL CE+FS ERLELLGDSVLKY V C LFL++P KHEGQLS R
Sbjct: 1058 ---IPVTLILEAITTLRCCETFSLERLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRS 1117
Query: 1121 QVICNATLHALGTKCKLQGYIRDSAFDPRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFC 1180
+ +CNATLH G LQGY+RD+AFDPRRWVAPG +LRP PC CG++TA VP ++
Sbjct: 1118 KAVCNATLHKHGIWRSLQGYVRDNAFDPRRWVAPGQISLRPFPCNCGIETAFVPSHRRYI 1177
Query: 1181 SEDPKVVLGKCCDKGHRWLVSKTIADCAEALIGAYYVDGGIIAALHVIKWLGIDADLDVA 1240
+DP +GK CD+GHRW+ SKTI+DC EAL+GAYYV GGI AAL V++W GID D+
Sbjct: 1178 RDDPSFFVGKPCDRGHRWMCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGIDIKCDMK 1237
Query: 1241 LVVDAIASASLRSCNLKDTEIATLESKIGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLE 1300
L+ + +AS K +I LE+K+ Y F+VKGLLLEAITH S Q LGV+YCYQRLE
Sbjct: 1238 LLQEVKFNASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLE 1297
Query: 1301 FLGDSVLDLLITWYYYQKYSDIDPGELTDLRSASVNNETFAQVAVRRNLQQHLQHCSGLL 1360
FLGDSVLDLL+T + Y ++D+DPGELTDLRSA V+NE FAQ VR N+ HLQH SG+L
Sbjct: 1298 FLGDSVLDLLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGIL 1357
Query: 1361 ISQISEYVKYLSESHDAGKSLHGN---KGPKVLGDMVESIAGAILIDTKLNLDEVWKIYK 1420
+ QI+EYV+ E + K PKVLGD++ESIAGA+ IDT N+D VW+I++
Sbjct: 1358 LEQITEYVRSNLECQGKESEFLQHTTCKVPKVLGDIMESIAGAVFIDTDFNVDMVWEIFE 1417
Query: 1421 PLLTPLVTPDKLELPPLRELIELCDSLGYFIKDKCTRKGEIFHAELRLQLQDVLLVGEGY 1480
PLL+PL+TPDKL LPP REL+ELC +G F+ KCT KGE E+ LQL+D LLV +G+
Sbjct: 1418 PLLSPLITPDKLALPPYRELLELCSHIGCFLNSKCTSKGEEVIIEMSLQLRDELLVAQGH 1477
Query: 1481 ERTRKASRGEAAQRILVQLETRGISYSRSGSKKRKQN--PSCVEAAMVFSSSINCSTDAC 1540
+R +K ++ +AA RIL L+ +G+S + SK ++ + S ++ + S + +D
Sbjct: 1478 DRNKKRAKAKAASRILADLKQQGLSIKQCLSKAKQLDIVTSDLQFDLTSSGTQLSYSDLN 1537
Query: 1541 D-------PNSETPVIGPINLKKGGPRSTLFELCKKLQWPMPTFNTVENKSRVLIDIGEG 1600
D + + V+ P+ ++KGGPRS LF+LCK LQWPMP F VE + R I + +G
Sbjct: 1538 DYHILEGLSSVKKEVVLPLKMEKGGPRSALFKLCKILQWPMPEFEFVEQRFRTPI-VMDG 1597
Query: 1601 SERRKGFNSYLSSIILQIPNAGCIECKGDARADKKSSLDSASLVMLEELRQ 1633
+ FNS++S+I L IP+A I +G+ R DKKS+ DSASL+ML +L++
Sbjct: 1598 A-TTTNFNSFVSTITLHIPDATTITFQGERRTDKKSAQDSASLMMLHKLQE 1629
BLAST of Carg27026 vs. ExPASy Swiss-Prot
Match:
Q9SP32 (Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV=2)
HSP 1 Score: 797.7 bits (2059), Expect = 2.4e-229
Identity = 580/1722 (33.68%), Postives = 865/1722 (50.23%), Query Frame = 0
Query: 42 RRYQMEVFEVGMKRNTIAVLETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLV 101
RRYQ++V E +NTIA LETGAGKT+IA++LIK + K + S K +FL P V LV
Sbjct: 250 RRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPLV 309
Query: 102 HQQFNVIKVQTDFEVAEYYGAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRL 161
+QQ VI+ QT F+V Y G MG D W+ W++E + VLVMT QILL+ LR + R+
Sbjct: 310 YQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLNILRHSIIRM 369
Query: 162 GTVCLMIMDECHRATGNHPYTKIMKEFYHKS--DNKPKIFGMTASPVIRKGVSSSLDCEC 221
T+ L+I+DECH A HPY+ +M EFYH + D +P IFGMTASPV KGVSS +DC
Sbjct: 370 ETIDLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPAIFGMTASPVNLKGVSSQVDCAI 429
Query: 222 QIGELESILDSKIYAIEDKKEVEIYVPSAKETCIFYEPAK---SLTLELKAKIEALWSKF 281
+I LE+ LDS + I+D+KE+E +VP E + Y+ A SL +K I A+
Sbjct: 430 KIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQMIAAVEEAA 489
Query: 282 DTSLSNSQ----VALQVHYKDVDSKLKALKKRLSSDHF--------KISYCLDELGVLCA 341
S S+ A KD ++ + +R SD I+Y L ELG CA
Sbjct: 490 QASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHKLRAINYTLAELGQWCA 549
Query: 342 YEAIKVLLE----------NVNIPNNEYELSRESSLQYKQFLEEA-----LRVIG----- 401
Y+ + L V++ E LS SL + LE A +G
Sbjct: 550 YKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEGAAAEKVAAEVGKPENG 609
Query: 402 ------ESFPLGNENIPNFGFDFQK----AVDLGYISPKLFELLQLFESFGVSRQVLCLI 461
E L ++ + + G + AV G ++PK+ L++L + + ++
Sbjct: 610 NAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQSLIKLLLKYQHTADFRAIV 669
Query: 462 FVERIIAANVIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLF 521
FVER++AA V+ + ++ +LS + + G N S + ++Q +T+ FR G V LL
Sbjct: 670 FVERVVAALVLPKVFAELPSLSFIRCASMIGHNNSQEMKSSQMQ-DTISKFRDGHVTLLV 729
Query: 522 STDVVEEGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFD 581
+T V EEGL + C+ V+RFDL KTV +Y+QSRGRAR+ S YIL++ERGNV L +
Sbjct: 730 ATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNVSHAAFLRN 789
Query: 582 VIRSDRSMTEAAMSRD-----PDACMLKPFSIMETDSYIVEATGASVTADYSVGLIHQYC 641
S+ ++ + A+ R D L + Y VEATGA V+ + +VGL+H YC
Sbjct: 790 ARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMVSLNSAVGLVHFYC 849
Query: 642 KKLPGDKYFSPKPIFQLSYCE-----GSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVC 701
+LPGD+Y +P F + E Y CRL LP A F+ + GP + L++Q VC
Sbjct: 850 SQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFEILEGPVCSSMRLAQQAVC 909
Query: 702 LEACKKLHQMGALNDHLLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGT 761
L ACKKLH+MGA D LLP + + + + GT + +E + L G
Sbjct: 910 LAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGTARHREFYPEGVADVLKGE 969
Query: 762 W---GEKV--EGATFQAYKFDFSC-------SVIYEHFSGFVLLLESKLDDDVGNFELEL 821
W G++V F Y ++ C S F +L ++LD +V + ++L
Sbjct: 970 WVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEVSEFAILFGNELDAEVLSMSMDL 1029
Query: 822 YLISKMV-KASVSFAGQVHLDAEQIMKAKCFQELFFNGLFGRLLIGSKLTGKKRDFLLQK 881
Y+ M+ KAS++F G + + Q+ K F +L D ++
Sbjct: 1030 YVARAMITKASLAFKGSLDITENQLSSLKKFH--------------VRLMSIVLDVDVEP 1089
Query: 882 DTKPLWITSNMYLLLPVDSPDASSDDIWKIHWRAIDSCVSV------------------- 941
T P W + YL +PV + + S + I I+W ++
Sbjct: 1090 STTP-WDPAKAYLFVPV-TDNTSMEPIKGINWELVEKITKTTAWDNPLQRARPDVYLGTN 1149
Query: 942 -------------------VEFLKKNSSLDAERNCGATSD------SSPSRNC---SAET 1001
+ F +K+ R A+ D P R+ E
Sbjct: 1150 ERTLGGDRREYGFGKLRHNIVFGQKSHPTYGIRGAVASFDVVRASGLLPVRDAFEKEVEE 1209
Query: 1002 ESNAASLIHFANCVLDVHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSD-KAPPD 1061
+ + L+ C++ L ++V A H+GK + + + + SAE+ F P +
Sbjct: 1210 DLSKGKLMMADGCMV-AEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLE 1269
Query: 1062 YITFADYFNKRYGIMLSYPQQPLLRLKQSHNPHNLL-VNFKDEGVTSDKLQSGSAFRKPQ 1121
Y T+ADY+ ++YG+ L+ QQPL++ + NLL F+ G + L
Sbjct: 1270 YNTYADYYKQKYGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGESETVLDK-------T 1329
Query: 1122 MHVHMPPELVLSMDVPKGVLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLI 1181
+V +PPEL + + +++ + LPS+M R ES++LA QL+ I+Y I +S I
Sbjct: 1330 YYVFLPPELCVVHPLSGSLIRGAQRLPSIMRRVESMLLAVQLKNLISYP-----IPTSKI 1389
Query: 1182 LEALTTLGSCESFSFERLELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLH 1241
LEALT E+F +ER ELLGD+ LK+ VS LFLK+P+KHEGQL+ RQQ++ N L+
Sbjct: 1390 LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLY 1449
Query: 1242 ALGTKCKLQGYIRDSAFDPRRWVAPGHCTLRPVPCKCG----VDTAEVPLDDKFCS--ED 1301
LQ YI+ F P RW APG + K G D + P+ ++ ED
Sbjct: 1450 QFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSSFFDEEQKPVSEENSDVFED 1509
Query: 1302 PKVVLGKCCD--KGHRWLVSKTIADCAEALIGAYYVDGGIIAALHVIKWLGIDADLDVAL 1361
++ G+ +R L SKT+AD EALIG YYV+GG IAA H++KW+GI + D
Sbjct: 1510 GEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDE 1569
Query: 1362 VVDAIASASLRSCNLKDTEIATLESKIGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEF 1421
V + + ++ LK + LE + YEF KGLL+EAITH S GV+ CYQRLEF
Sbjct: 1570 VDGTLKNVNVPESVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVS-CYQRLEF 1629
Query: 1422 LGDSVLDLLITWYYYQKYSDIDPGELTDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLI 1481
+GD+VLD LIT + + Y+ + PG LTDLR+A+VNNE FA+VAV+ L +L+H S L
Sbjct: 1630 VGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALE 1689
Query: 1482 SQISEYVKYL-SESHDAGKSLHG---NKGPKVLGDMVESIAGAILIDTKLNLDEVWKIYK 1541
QI E+VK + +ES G + G K PKVLGD+VESIAGAI +D+ + WK+++
Sbjct: 1690 KQIREFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQ 1749
Query: 1542 PLLTPLVTPDKLELPPLRELIELCDSLGYFIKDKCTRKGEIFHAELRLQLQDVLLVGEGY 1601
PLL P+VTP+ L + P+REL E C ++ K +R G E+ + D + VG
Sbjct: 1750 PLLQPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNTATVEVFI---DGVQVGVAQ 1809
Query: 1602 ERTRKASRGEAAQRILVQLETRGISYSRSGSKKRKQNPSCVEAAMVFSSSINCSTDACDP 1633
+K ++ AA+ L L+ + I+ S+ IN + +A +
Sbjct: 1810 NPQKKMAQKLAARNALAALKEKEIAESK-------------------EKHIN-NGNAGED 1869
BLAST of Carg27026 vs. ExPASy Swiss-Prot
Match:
Q8LMR2 (Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL1 PE=3 SV=1)
HSP 1 Score: 726.5 bits (1874), Expect = 6.8e-208
Identity = 560/1768 (31.67%), Postives = 854/1768 (48.30%), Query Frame = 0
Query: 12 ARKRSFNDMKSSVTSDK---TNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAVLETGAGKT 71
AR + M+ +D+ +KP+ E R+YQ+EV E RNTIA LETGAGKT
Sbjct: 236 ARTQDGGSMEKKAEADRMGAAQREKPVAEE-RARQYQLEVLEQAKSRNTIAFLETGAGKT 295
Query: 72 MIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYYGAMGVDDW 131
+IAV+LIK + M K +FL P V LV+Q
Sbjct: 296 LIAVLLIKSVCDKMLKENKKMLAVFLVPKVPLVYQ------------------------- 355
Query: 132 NMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHPYTKIMKEF 191
VLVMT QILL+ LR + ++ + L+I+DECH A HPY+ +M EF
Sbjct: 356 -------------VLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEF 415
Query: 192 YHKS--DNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKEVEIYVP 251
YH + + +P +FGMTASPV KGV+S DC +I LES LDS + I+D+KE+E +VP
Sbjct: 416 YHTTPKEKRPAVFGMTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKELEKHVP 475
Query: 252 SAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHY---KDVDSK-----L 311
E + Y+ A +L L +I+ + S + + +S + + +D S+ +
Sbjct: 476 MPLEVVVQYDKAATL-WSLHEQIKQMESTVEEAALSSSKRTKWQFMGARDAGSRDELRLV 535
Query: 312 KALKKRLSSDHF--------KISYCLDELGVLCAYEAIKVLLE----------NVNIPNN 371
+ +R SD I+Y L ELG CAY+ + L V++
Sbjct: 536 YGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQVDVKFQ 595
Query: 372 EYELSRESSLQYKQFLEEALRVIGESFPLGNENIPNFGFD------------------FQ 431
E L + L + Q L E + E+ + +N +
Sbjct: 596 ESYLKKVVDLLHCQ-LTEGAAMKSETSDVEMQNTEKHNTNDLEEGELPDSHGEHVDEVIG 655
Query: 432 KAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERIIAANVIERFVKKVANLSHFTVSY 491
AV G ++P++ L+++ + + +IFVER++ A V+ + + ++ +LS +
Sbjct: 656 AAVADGKVTPRVQALIKILLKYQHTEDFRAIIFVERVVTALVLPKVLAELPSLSFIRCAS 715
Query: 492 VTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVEEGLHVPNCSFVVRFDLPKTVRS 551
+ G N + A ++Q +T+ FR G+V LL +T V EEGL + C+ V+RFDL KTV +
Sbjct: 716 LIGHNNNQEMRACQMQ-DTISKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 775
Query: 552 YVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDRSMTEAAMSRD-----PDACMLK 611
Y+QSRGRAR+ S YIL+LERGN+ L + S+ ++ + AM R +L
Sbjct: 776 YIQSRGRARKPGSDYILMLERGNISHETFLRNARNSEETLRKEAMERTDLSHLDGTSVLS 835
Query: 612 PFSIMETDSYIVEATGASVTADYSVGLIHQYCKKLPGDKYFSPKPIFQLSYCE---GS-- 671
P Y VE+TGA V+ + +VGLIH YC +LP D+Y P F + E GS
Sbjct: 836 PVDTSPGSMYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILHPEFIMQKYEKPGGSVE 895
Query: 672 YECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDHLLPSIEEISEFD 731
Y C+L LP A F+ + GP + L++Q VCL ACKKLH+MGA D LLP
Sbjct: 896 YSCKLQLPCNAPFEKLEGPICSSIRLAQQAVCLAACKKLHEMGAFTDTLLPD----RGSG 955
Query: 732 MGLKCNASTSG---AGTTKRKELHGRTAIRALSGTW----GEKVEGATF-QAYKFDFSC- 791
G K + G GT + +E + L G W + + + F + Y + +C
Sbjct: 956 EGEKTEQNDEGEPLPGTARHREFYPEGVADILRGEWILSGRDGYQNSQFIKLYMYSVNCV 1015
Query: 792 ------SVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMV-KASVSFAGQVHLDAEQI 851
S F ++ ++LD +V + ++L++ M+ KAS+ F G++ + Q+
Sbjct: 1016 NVGTSKDPFVTQLSNFAIIFGNELDAEVLSTTMDLFVARTMITKASLVFRGRIEITESQL 1075
Query: 852 MKAKCFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSD 911
+ K F +L D + T P W + YL +PV + + +D
Sbjct: 1076 VLLKSFH--------------VRLMSIVLDVDVDPSTTP-WDPAKAYLFVPVGA-EKCTD 1135
Query: 912 DIWKIHWRAIDSCVSVVEF-------------------------------LKKNSSLD-- 971
+ +I W +++ V+ + L+ ++
Sbjct: 1136 PLREIDWTLVNNIVNTDAWNNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGTAFGQK 1195
Query: 972 -----------AERNCGATSDSSPSRNCSAETESNAASLIHFANCVLDVHSLKDRVVLAI 1031
AE + S P+R+ ++ + A+ + L VV A
Sbjct: 1196 AHPTYGIRGAIAEFDIVKASGLVPARDRGHFSDYQNQGKLFMADSCWNAKDLAGMVVTAA 1255
Query: 1032 HTGKIYSIVEVVNNSSAESPFDGNSD-KAPPDYITFADYFNKRYGIMLSYPQQPLLRLKQ 1091
H+GK + + + N +AE+ F P +Y ++ADY+ ++YG+ L Y +QPL+R +
Sbjct: 1256 HSGKRFYVDCICYNMNAENSFPRKEGYLGPLEYSSYADYYKQKYGVELIYRKQPLIRARG 1315
Query: 1092 SHNPHNLLV-----NFKDEGVTSDKLQSGSAFRKPQMHVHMPPELVLSMDVPKGVLKSSY 1151
NLL + EG S+ L +V++PPEL L +P +++ +
Sbjct: 1316 VSYCKNLLSPRFEHSDAREGDFSENLDK-------TYYVYLPPELCLVHPLPGSLVRGAQ 1375
Query: 1152 LLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERLELLGDS 1211
LPS+M R ES++LA QL+ I+Y + ++ ILEALT E+ +ER ELLGD+
Sbjct: 1376 RLPSIMRRVESMLLAVQLKDIIDYP-----VPATKILEALTAASCQETLCYERAELLGDA 1435
Query: 1212 VLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFDPRRWVA 1271
LK+ VS LFLK+P+KHEGQL+ RQQ++ N L+ LQ YI+ F P RW A
Sbjct: 1436 YLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKTLQSYIQADRFAPSRWAA 1495
Query: 1272 PGHCTLRPVPCK-----------CGVDTAEVPLDD--KFCSEDPKVVLGKCCDKGHRWLV 1331
PG + + G + + DD ED ++ C +R L
Sbjct: 1496 PGVLPVFDEESREYEPSIFDEESTGCELQKESYDDYADNMQEDGEIEGDSSC---YRVLS 1555
Query: 1332 SKTIADCAEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDA----IASASLRSCNL 1391
SKT+AD EALIG YYV GG IAA H++KW+GI A+LD + I + +RS N
Sbjct: 1556 SKTLADVVEALIGVYYVAGGKIAANHLMKWIGIHAELDPEEIPPPKPYDIPESIMRSINF 1615
Query: 1392 KDTEIATLESKIGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYY 1451
TL+ +G EF KGLL+EAITH S GV+ CYQRLEF+GD+VLD LIT + +
Sbjct: 1616 D-----TLKGVLGIEFQNKGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITRHLF 1675
Query: 1452 QKYSDIDPGELTDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQISEYVKYLSES-- 1511
Y+D+ PG LTDLR+A+VNNE FA+VAV+ L HL+H S L +QI E+VK + E
Sbjct: 1676 FTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELL 1735
Query: 1512 --HDAGKSLHGNKGPKVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELP 1571
L K PKVLGD+VESIAGAI +D+ + VWK+++PLL P+VTP+ L +
Sbjct: 1736 KPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPMH 1795
Query: 1572 PLRELIELCDSLGYFIKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRI 1631
P+REL E C ++ K +R G I E+ D + +G +K ++ AA+
Sbjct: 1796 PVRELQERCQQQAEGLEYKASRAGNIATVEV---FVDGVQIGVAQNPQKKMAQKLAARNA 1855
Query: 1632 LVQLETRGISYSRSGSKKRKQNPSCVEAAMVFSSSINCSTDACDPNSETPVIGPINLKKG 1633
LV L+ + + K+ +++ A +F+
Sbjct: 1856 LVVLKEK----ETATKKEDERDGEKKNGAQMFT--------------------------- 1872
BLAST of Carg27026 vs. ExPASy TrEMBL
Match:
A0A6J1G4W0 (endoribonuclease Dicer homolog 3a isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450768 PE=3 SV=1)
HSP 1 Score: 3253.4 bits (8434), Expect = 0.0e+00
Identity = 1629/1641 (99.27%), Postives = 1635/1641 (99.63%), Query Frame = 0
Query: 1 MHNPEEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV 60
MHNPEEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVF+VGMKRNTIAV
Sbjct: 1 MHNPEEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFKVGMKRNTIAV 60
Query: 61 LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY 120
LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY
Sbjct: 61 LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY 120
Query: 121 GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP 180
GAMGVDDWN+NCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP
Sbjct: 121 GAMGVDDWNINCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP 180
Query: 181 YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE 240
YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE
Sbjct: 181 YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE 240
Query: 241 VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKA 300
VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKA
Sbjct: 241 VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKA 300
Query: 301 LKKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL 360
LKKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL
Sbjct: 301 LKKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL 360
Query: 361 RVIGESFPLGNENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII 420
RVIGESFPLGNENIPNFGFD QKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII
Sbjct: 361 RVIGESFPLGNENIPNFGFDCQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII 420
Query: 421 AANVIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE 480
AANVIE+FVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE
Sbjct: 421 AANVIEKFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE 480
Query: 481 EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR 540
EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR
Sbjct: 481 EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR 540
Query: 541 SMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASVTADYSVGLIHQYCKKLPGDKYFSP 600
SMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASVTAD SVGLIHQYCKKLPGDKYFSP
Sbjct: 541 SMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASVTADSSVGLIHQYCKKLPGDKYFSP 600
Query: 601 KPIFQLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH 660
KPIFQLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH
Sbjct: 601 KPIFQLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH 660
Query: 661 LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFD 720
LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFD
Sbjct: 661 LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFD 720
Query: 721 FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK 780
FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK
Sbjct: 721 FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK 780
Query: 781 CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWK 840
CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWK
Sbjct: 781 CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWK 840
Query: 841 IHWRAIDSCVSVVEFLKKNSSLDAERNCGATSDSSPSRNCSAETESNAASLIHFANCVLD 900
IHWRAIDSCVSVVEFLKKNSSLDAERNCGA SDSSPSRNCSAETESNAASLIHFANCVLD
Sbjct: 841 IHWRAIDSCVSVVEFLKKNSSLDAERNCGAISDSSPSRNCSAETESNAASLIHFANCVLD 900
Query: 901 VHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGIMLS 960
VHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGI LS
Sbjct: 901 VHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGITLS 960
Query: 961 YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAFRKPQMHVHMPPELVLSMDVPKG 1020
YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAFRKPQMHVHMPPELVLSMDVPKG
Sbjct: 961 YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAFRKPQMHVHMPPELVLSMDVPKG 1020
Query: 1021 VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL 1080
VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL
Sbjct: 1021 VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL 1080
Query: 1081 ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFD 1140
ELLGDSVLKYAVSCHLFLKFPEKHEGQLS RRQQVICNATLHALGTKCKLQGYIRDSAFD
Sbjct: 1081 ELLGDSVLKYAVSCHLFLKFPEKHEGQLSFRRQQVICNATLHALGTKCKLQGYIRDSAFD 1140
Query: 1141 PRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC 1200
PRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC
Sbjct: 1141 PRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC 1200
Query: 1201 AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESK 1260
AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESK
Sbjct: 1201 AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESK 1260
Query: 1261 IGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGEL 1320
IGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGEL
Sbjct: 1261 IGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGEL 1320
Query: 1321 TDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQISEYVKYLSESHDAGKSLHGNKGP 1380
TDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQI+EYVKYLSESHDAGKSLHGNKGP
Sbjct: 1321 TDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQITEYVKYLSESHDAGKSLHGNKGP 1380
Query: 1381 KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYF 1440
KVLGDMVESI+GAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYF
Sbjct: 1381 KVLGDMVESISGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYF 1440
Query: 1441 IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSG 1500
IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSG
Sbjct: 1441 IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSG 1500
Query: 1501 SKKRKQNPSCVEAAMVFSSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKLQW 1560
SKKRKQNPSCVEAAMV SSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKLQW
Sbjct: 1501 SKKRKQNPSCVEAAMVLSSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKLQW 1560
Query: 1561 PMPTFNTVENKSRVLIDIGEGSERRKGFNSYLSSIILQIPNAGCIECKGDARADKKSSLD 1620
PMPTFNTVENKSRVLIDIGEGSERRKGFNSYLSSIILQIPNAGCIECKGDARADKKSSLD
Sbjct: 1561 PMPTFNTVENKSRVLIDIGEGSERRKGFNSYLSSIILQIPNAGCIECKGDARADKKSSLD 1620
Query: 1621 SASLVMLEELRQRGRVVINDS 1642
SASLVMLEELRQRGRVVIND+
Sbjct: 1621 SASLVMLEELRQRGRVVINDA 1641
BLAST of Carg27026 vs. ExPASy TrEMBL
Match:
A0A6J1KK54 (endoribonuclease Dicer homolog 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493921 PE=3 SV=1)
HSP 1 Score: 3208.7 bits (8318), Expect = 0.0e+00
Identity = 1606/1641 (97.87%), Postives = 1624/1641 (98.96%), Query Frame = 0
Query: 1 MHNPEEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV 60
M+NP EENCDGARKRSFNDM+SSVTSD+TNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV
Sbjct: 1 MYNPVEENCDGARKRSFNDMESSVTSDQTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV 60
Query: 61 LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY 120
LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY
Sbjct: 61 LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY 120
Query: 121 GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP 180
GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP
Sbjct: 121 GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP 180
Query: 181 YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE 240
YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE
Sbjct: 181 YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE 240
Query: 241 VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKA 300
VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDT LSNSQVALQVHYKDVDSKLKA
Sbjct: 241 VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTLLSNSQVALQVHYKDVDSKLKA 300
Query: 301 LKKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL 360
L+KRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL
Sbjct: 301 LRKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL 360
Query: 361 RVIGESFPLGNENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII 420
RVIGES PLG+ENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCL+FVERII
Sbjct: 361 RVIGESLPLGHENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLVFVERII 420
Query: 421 AANVIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE 480
AANVIERFV+KVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE
Sbjct: 421 AANVIERFVRKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE 480
Query: 481 EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR 540
EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR
Sbjct: 481 EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR 540
Query: 541 SMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASVTADYSVGLIHQYCKKLPGDKYFSP 600
SMTEAAMSRDPDACMLKPFSIMETD YIVEATGASVTAD SVGLIHQYCKKLPGDKYFSP
Sbjct: 541 SMTEAAMSRDPDACMLKPFSIMETDCYIVEATGASVTADSSVGLIHQYCKKLPGDKYFSP 600
Query: 601 KPIFQLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH 660
KPIFQLSY EGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH
Sbjct: 601 KPIFQLSYGEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH 660
Query: 661 LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFD 720
LLPSIEEISEFDMGL+CNASTSGAGTTKRKELHGRT IRALSGTWGEKVEGATFQAYKFD
Sbjct: 661 LLPSIEEISEFDMGLRCNASTSGAGTTKRKELHGRTTIRALSGTWGEKVEGATFQAYKFD 720
Query: 721 FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK 780
FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVH+DAEQIMKAK
Sbjct: 721 FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHMDAEQIMKAK 780
Query: 781 CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWK 840
CFQELFFNGLFGRLLIGSKLTGKKRDFLL KDTKPLWITSNMYLLLPVDSPDASSDD+WK
Sbjct: 781 CFQELFFNGLFGRLLIGSKLTGKKRDFLLLKDTKPLWITSNMYLLLPVDSPDASSDDLWK 840
Query: 841 IHWRAIDSCVSVVEFLKKNSSLDAERNCGATSDSSPSRNCSAETESNAASLIHFANCVLD 900
IHWRAIDSCVSVVEFLKKNSSLDAERNCGA SDSSPSRNCSAETESNAASLIHFANCVLD
Sbjct: 841 IHWRAIDSCVSVVEFLKKNSSLDAERNCGAISDSSPSRNCSAETESNAASLIHFANCVLD 900
Query: 901 VHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGIMLS 960
VHSLKDRVVLAIHTGKIYSIVEVVNN+SAESPFDGNSDKAPPDYITFADYFNKRYGI LS
Sbjct: 901 VHSLKDRVVLAIHTGKIYSIVEVVNNTSAESPFDGNSDKAPPDYITFADYFNKRYGITLS 960
Query: 961 YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAFRKPQMHVHMPPELVLSMDVPKG 1020
YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSA RKPQMHVHMPPELVLSMDVPKG
Sbjct: 961 YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAVRKPQMHVHMPPELVLSMDVPKG 1020
Query: 1021 VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL 1080
VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL
Sbjct: 1021 VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL 1080
Query: 1081 ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFD 1140
ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFD
Sbjct: 1081 ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFD 1140
Query: 1141 PRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC 1200
PRRWVAPGH TLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC
Sbjct: 1141 PRRWVAPGHGTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC 1200
Query: 1201 AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESK 1260
AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAI SASLRSCNLKDTEIATLESK
Sbjct: 1201 AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAITSASLRSCNLKDTEIATLESK 1260
Query: 1261 IGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGEL 1320
IGYEF+VKGLLLEAITHTSDQ LGVNYCYQRLEFLGDSVLDLLITWYYYQKY DIDPGEL
Sbjct: 1261 IGYEFSVKGLLLEAITHTSDQELGVNYCYQRLEFLGDSVLDLLITWYYYQKYPDIDPGEL 1320
Query: 1321 TDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQISEYVKYLSESHDAGKSLHGNKGP 1380
TDLRSASVNN+TFAQVAVRRNLQQHLQHCSGLLISQI+EYVKYLSESHDAGKSLHGNKGP
Sbjct: 1321 TDLRSASVNNKTFAQVAVRRNLQQHLQHCSGLLISQITEYVKYLSESHDAGKSLHGNKGP 1380
Query: 1381 KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYF 1440
KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLREL ELCDSLGYF
Sbjct: 1381 KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELNELCDSLGYF 1440
Query: 1441 IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSG 1500
IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQR+LVQLETRGISYSRSG
Sbjct: 1441 IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRLLVQLETRGISYSRSG 1500
Query: 1501 SKKRKQNPSCVEAAMVFSSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKLQW 1560
SKKRKQNPSCVEAAMV SSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKLQW
Sbjct: 1501 SKKRKQNPSCVEAAMVLSSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKLQW 1560
Query: 1561 PMPTFNTVENKSRVLIDIGEGSERRKGFNSYLSSIILQIPNAGCIECKGDARADKKSSLD 1620
PMPTFNTVE+KSRVLIDIGEGSERRKGFNSYLS+IILQIPNAGCIECKGDARADKKSSLD
Sbjct: 1561 PMPTFNTVEHKSRVLIDIGEGSERRKGFNSYLSNIILQIPNAGCIECKGDARADKKSSLD 1620
Query: 1621 SASLVMLEELRQRGRVVINDS 1642
SASLVMLEELRQ+GRVVINDS
Sbjct: 1621 SASLVMLEELRQQGRVVINDS 1641
BLAST of Carg27026 vs. ExPASy TrEMBL
Match:
A0A6J1G500 (endoribonuclease Dicer homolog 3a isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450768 PE=3 SV=1)
HSP 1 Score: 3042.3 bits (7886), Expect = 0.0e+00
Identity = 1524/1535 (99.28%), Postives = 1529/1535 (99.61%), Query Frame = 0
Query: 1 MHNPEEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV 60
MHNPEEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVF+VGMKRNTIAV
Sbjct: 1 MHNPEEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFKVGMKRNTIAV 60
Query: 61 LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY 120
LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY
Sbjct: 61 LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY 120
Query: 121 GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP 180
GAMGVDDWN+NCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP
Sbjct: 121 GAMGVDDWNINCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP 180
Query: 181 YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE 240
YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE
Sbjct: 181 YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE 240
Query: 241 VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKA 300
VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKA
Sbjct: 241 VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKA 300
Query: 301 LKKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL 360
LKKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL
Sbjct: 301 LKKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL 360
Query: 361 RVIGESFPLGNENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII 420
RVIGESFPLGNENIPNFGFD QKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII
Sbjct: 361 RVIGESFPLGNENIPNFGFDCQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII 420
Query: 421 AANVIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE 480
AANVIE+FVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE
Sbjct: 421 AANVIEKFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE 480
Query: 481 EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR 540
EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR
Sbjct: 481 EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR 540
Query: 541 SMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASVTADYSVGLIHQYCKKLPGDKYFSP 600
SMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASVTAD SVGLIHQYCKKLPGDKYFSP
Sbjct: 541 SMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASVTADSSVGLIHQYCKKLPGDKYFSP 600
Query: 601 KPIFQLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH 660
KPIFQLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH
Sbjct: 601 KPIFQLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH 660
Query: 661 LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFD 720
LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFD
Sbjct: 661 LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFD 720
Query: 721 FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK 780
FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK
Sbjct: 721 FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK 780
Query: 781 CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWK 840
CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWK
Sbjct: 781 CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWK 840
Query: 841 IHWRAIDSCVSVVEFLKKNSSLDAERNCGATSDSSPSRNCSAETESNAASLIHFANCVLD 900
IHWRAIDSCVSVVEFLKKNSSLDAERNCGA SDSSPSRNCSAETESNAASLIHFANCVLD
Sbjct: 841 IHWRAIDSCVSVVEFLKKNSSLDAERNCGAISDSSPSRNCSAETESNAASLIHFANCVLD 900
Query: 901 VHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGIMLS 960
VHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGI LS
Sbjct: 901 VHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGITLS 960
Query: 961 YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAFRKPQMHVHMPPELVLSMDVPKG 1020
YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAFRKPQMHVHMPPELVLSMDVPKG
Sbjct: 961 YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAFRKPQMHVHMPPELVLSMDVPKG 1020
Query: 1021 VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL 1080
VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL
Sbjct: 1021 VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL 1080
Query: 1081 ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFD 1140
ELLGDSVLKYAVSCHLFLKFPEKHEGQLS RRQQVICNATLHALGTKCKLQGYIRDSAFD
Sbjct: 1081 ELLGDSVLKYAVSCHLFLKFPEKHEGQLSFRRQQVICNATLHALGTKCKLQGYIRDSAFD 1140
Query: 1141 PRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC 1200
PRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC
Sbjct: 1141 PRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC 1200
Query: 1201 AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESK 1260
AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESK
Sbjct: 1201 AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESK 1260
Query: 1261 IGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGEL 1320
IGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGEL
Sbjct: 1261 IGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGEL 1320
Query: 1321 TDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQISEYVKYLSESHDAGKSLHGNKGP 1380
TDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQI+EYVKYLSESHDAGKSLHGNKGP
Sbjct: 1321 TDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQITEYVKYLSESHDAGKSLHGNKGP 1380
Query: 1381 KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYF 1440
KVLGDMVESI+GAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYF
Sbjct: 1381 KVLGDMVESISGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYF 1440
Query: 1441 IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSG 1500
IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSG
Sbjct: 1441 IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSG 1500
Query: 1501 SKKRKQNPSCVEAAMVFSSSINCSTDACDPNSETP 1536
SKKRKQNPSCVEAAMV SSSINCSTDACDPNSETP
Sbjct: 1501 SKKRKQNPSCVEAAMVLSSSINCSTDACDPNSETP 1535
BLAST of Carg27026 vs. ExPASy TrEMBL
Match:
A0A6J1KHI7 (endoribonuclease Dicer homolog 3a isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493921 PE=3 SV=1)
HSP 1 Score: 3001.1 bits (7779), Expect = 0.0e+00
Identity = 1503/1535 (97.92%), Postives = 1518/1535 (98.89%), Query Frame = 0
Query: 1 MHNPEEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV 60
M+NP EENCDGARKRSFNDM+SSVTSD+TNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV
Sbjct: 1 MYNPVEENCDGARKRSFNDMESSVTSDQTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV 60
Query: 61 LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY 120
LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY
Sbjct: 61 LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY 120
Query: 121 GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP 180
GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP
Sbjct: 121 GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP 180
Query: 181 YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE 240
YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE
Sbjct: 181 YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE 240
Query: 241 VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKA 300
VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDT LSNSQVALQVHYKDVDSKLKA
Sbjct: 241 VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTLLSNSQVALQVHYKDVDSKLKA 300
Query: 301 LKKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL 360
L+KRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL
Sbjct: 301 LRKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL 360
Query: 361 RVIGESFPLGNENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII 420
RVIGES PLG+ENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCL+FVERII
Sbjct: 361 RVIGESLPLGHENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLVFVERII 420
Query: 421 AANVIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE 480
AANVIERFV+KVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE
Sbjct: 421 AANVIERFVRKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE 480
Query: 481 EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR 540
EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR
Sbjct: 481 EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR 540
Query: 541 SMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASVTADYSVGLIHQYCKKLPGDKYFSP 600
SMTEAAMSRDPDACMLKPFSIMETD YIVEATGASVTAD SVGLIHQYCKKLPGDKYFSP
Sbjct: 541 SMTEAAMSRDPDACMLKPFSIMETDCYIVEATGASVTADSSVGLIHQYCKKLPGDKYFSP 600
Query: 601 KPIFQLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH 660
KPIFQLSY EGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH
Sbjct: 601 KPIFQLSYGEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH 660
Query: 661 LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFD 720
LLPSIEEISEFDMGL+CNASTSGAGTTKRKELHGRT IRALSGTWGEKVEGATFQAYKFD
Sbjct: 661 LLPSIEEISEFDMGLRCNASTSGAGTTKRKELHGRTTIRALSGTWGEKVEGATFQAYKFD 720
Query: 721 FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK 780
FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVH+DAEQIMKAK
Sbjct: 721 FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHMDAEQIMKAK 780
Query: 781 CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWK 840
CFQELFFNGLFGRLLIGSKLTGKKRDFLL KDTKPLWITSNMYLLLPVDSPDASSDD+WK
Sbjct: 781 CFQELFFNGLFGRLLIGSKLTGKKRDFLLLKDTKPLWITSNMYLLLPVDSPDASSDDLWK 840
Query: 841 IHWRAIDSCVSVVEFLKKNSSLDAERNCGATSDSSPSRNCSAETESNAASLIHFANCVLD 900
IHWRAIDSCVSVVEFLKKNSSLDAERNCGA SDSSPSRNCSAETESNAASLIHFANCVLD
Sbjct: 841 IHWRAIDSCVSVVEFLKKNSSLDAERNCGAISDSSPSRNCSAETESNAASLIHFANCVLD 900
Query: 901 VHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGIMLS 960
VHSLKDRVVLAIHTGKIYSIVEVVNN+SAESPFDGNSDKAPPDYITFADYFNKRYGI LS
Sbjct: 901 VHSLKDRVVLAIHTGKIYSIVEVVNNTSAESPFDGNSDKAPPDYITFADYFNKRYGITLS 960
Query: 961 YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAFRKPQMHVHMPPELVLSMDVPKG 1020
YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSA RKPQMHVHMPPELVLSMDVPKG
Sbjct: 961 YPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAVRKPQMHVHMPPELVLSMDVPKG 1020
Query: 1021 VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL 1080
VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL
Sbjct: 1021 VLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERL 1080
Query: 1081 ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFD 1140
ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFD
Sbjct: 1081 ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFD 1140
Query: 1141 PRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC 1200
PRRWVAPGH TLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC
Sbjct: 1141 PRRWVAPGHGTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADC 1200
Query: 1201 AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESK 1260
AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAI SASLRSCNLKDTEIATLESK
Sbjct: 1201 AEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAITSASLRSCNLKDTEIATLESK 1260
Query: 1261 IGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGEL 1320
IGYEF+VKGLLLEAITHTSDQ LGVNYCYQRLEFLGDSVLDLLITWYYYQKY DIDPGEL
Sbjct: 1261 IGYEFSVKGLLLEAITHTSDQELGVNYCYQRLEFLGDSVLDLLITWYYYQKYPDIDPGEL 1320
Query: 1321 TDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQISEYVKYLSESHDAGKSLHGNKGP 1380
TDLRSASVNN+TFAQVAVRRNLQQHLQHCSGLLISQI+EYVKYLSESHDAGKSLHGNKGP
Sbjct: 1321 TDLRSASVNNKTFAQVAVRRNLQQHLQHCSGLLISQITEYVKYLSESHDAGKSLHGNKGP 1380
Query: 1381 KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYF 1440
KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLREL ELCDSLGYF
Sbjct: 1381 KVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELNELCDSLGYF 1440
Query: 1441 IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSG 1500
IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQR+LVQLETRGISYSRSG
Sbjct: 1441 IKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRLLVQLETRGISYSRSG 1500
Query: 1501 SKKRKQNPSCVEAAMVFSSSINCSTDACDPNSETP 1536
SKKRKQNPSCVEAAMV SSSINCSTDACDPNSETP
Sbjct: 1501 SKKRKQNPSCVEAAMVLSSSINCSTDACDPNSETP 1535
BLAST of Carg27026 vs. ExPASy TrEMBL
Match:
A0A5A7VG67 (Endoribonuclease Dicer-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00050 PE=3 SV=1)
HSP 1 Score: 2907.5 bits (7536), Expect = 0.0e+00
Identity = 1456/1643 (88.62%), Postives = 1536/1643 (93.49%), Query Frame = 0
Query: 1 MHNPEEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAV 60
MH PE+EN DGARKR F D++ +V SD++NF+ M EGFIPRRYQMEVFEVGM+RNTIAV
Sbjct: 1 MHEPEQENRDGARKRRFCDLEPNVASDQSNFN--MAEGFIPRRYQMEVFEVGMRRNTIAV 60
Query: 61 LETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYY 120
LETG+GKTMIAVMLIKEIGKAMKSSGDKK IIFLAPTVHLVHQQFNVIK TDFEVAEYY
Sbjct: 61 LETGSGKTMIAVMLIKEIGKAMKSSGDKK-IIFLAPTVHLVHQQFNVIKDHTDFEVAEYY 120
Query: 121 GAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHP 180
GAMGVDDWNMN WEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMI+DECHRATGNHP
Sbjct: 121 GAMGVDDWNMNRWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIIDECHRATGNHP 180
Query: 181 YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKE 240
YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSS +CECQI +LESILDS++YAIEDKKE
Sbjct: 181 YTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSFNCECQIADLESILDSQVYAIEDKKE 240
Query: 241 VEIYVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKA 300
VEIYVPSAKE CIFYEPAK T+EL+AKIEALW KFD SLSNSQ A+Q HYKDVDSKLKA
Sbjct: 241 VEIYVPSAKEICIFYEPAKPQTMELRAKIEALWFKFDASLSNSQEAMQGHYKDVDSKLKA 300
Query: 301 LKKRLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEAL 360
LKKRLSSDH KI+YCLDELG++CAYEAIKVL EN+++PN E ++ RES LQYK FLEEAL
Sbjct: 301 LKKRLSSDHLKITYCLDELGIMCAYEAIKVLFENISVPNEESDVYRESFLQYKHFLEEAL 360
Query: 361 RVIGESFPLGNENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERII 420
VIGES LGNENIPN GFD KAVDLGYISPKLFELLQLFESFGVSRQ+LCLIFVERII
Sbjct: 361 LVIGESLSLGNENIPNLGFDLWKAVDLGYISPKLFELLQLFESFGVSRQLLCLIFVERII 420
Query: 421 AANVIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVE 480
AANVI+R VKKV NLSHFTVSYVTGCN SVGALAPKVQKETLELF HGK+NLLFSTDVVE
Sbjct: 421 AANVIKRIVKKVENLSHFTVSYVTGCNASVGALAPKVQKETLELFCHGKLNLLFSTDVVE 480
Query: 481 EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDR 540
EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQ+NSQYILLLERGN+KQR LFDVIRSDR
Sbjct: 481 EGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQNNSQYILLLERGNLKQRALLFDVIRSDR 540
Query: 541 SMTEAAMSRDPDACMLKPFSIMETDSYIVEATGASVTADYSVGLIHQYCKKLPGDKYFSP 600
SMT+AAMSRD DAC+LKPFS++ETD YIVEATGASVTAD SVGLI+QYCKKLPGDKYFSP
Sbjct: 541 SMTDAAMSRDSDACVLKPFSLVETDCYIVEATGASVTADSSVGLIYQYCKKLPGDKYFSP 600
Query: 601 KPIFQLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDH 660
KPIFQLSY EGSYEC+L LPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLH+MGALNDH
Sbjct: 601 KPIFQLSYGEGSYECQLTLPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHKMGALNDH 660
Query: 661 LLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFD 720
LLPS+EEISE DMGLK NAS S AG+TKRKELHGRTAIRALSGTWGE+ EGATFQAYKFD
Sbjct: 661 LLPSVEEISESDMGLKSNASMSRAGSTKRKELHGRTAIRALSGTWGEQDEGATFQAYKFD 720
Query: 721 FSCSVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAK 780
FSCSVIYE +SGFVLL+ESKLDDDV NFELELYL+SKMVKASVSF G+VHLDAEQI KAK
Sbjct: 721 FSCSVIYEIYSGFVLLIESKLDDDVSNFELELYLLSKMVKASVSFGGEVHLDAEQITKAK 780
Query: 781 CFQELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWK 840
CFQELFFN LFGRL IGSK TGKKRDFLLQKDT LWI+SNMYLLLPVD PD S+ D+WK
Sbjct: 781 CFQELFFNALFGRLFIGSKTTGKKRDFLLQKDTNSLWISSNMYLLLPVDLPDDSTHDLWK 840
Query: 841 IHWRAIDSCVSVVEFLKKNSSLDAERNC--GATSDSSPSRNCSAETESNAASLIHFANCV 900
IHWRAIDSCVSVVEFLKKNSSLDAERNC GA SDS PSRN SAET SNAA++IHFANCV
Sbjct: 841 IHWRAIDSCVSVVEFLKKNSSLDAERNCGAGAISDSWPSRNNSAETGSNAANVIHFANCV 900
Query: 901 LDVHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGIM 960
LDVHSLKDRVVLAIHTG+IYSIVEVV+N+SAESPFDGNSDK PPDYITFADYFNKRYGI
Sbjct: 901 LDVHSLKDRVVLAIHTGRIYSIVEVVSNTSAESPFDGNSDKGPPDYITFADYFNKRYGIS 960
Query: 961 LSYPQQPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSAFRKPQMHVHMPPELVLSMDVP 1020
LS+P+QPLLRLKQSHNPHNLLVNFKDEG TSDKL SG AF+KPQMHVHMPPELVLSMDVP
Sbjct: 961 LSFPKQPLLRLKQSHNPHNLLVNFKDEGNTSDKLPSGPAFKKPQMHVHMPPELVLSMDVP 1020
Query: 1021 KGVLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFE 1080
KGVLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSL ISSSLILEALTTLGSCE+FS E
Sbjct: 1021 KGVLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLSISSSLILEALTTLGSCENFSLE 1080
Query: 1081 RLELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSA 1140
RLELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKC LQGYIRDSA
Sbjct: 1081 RLELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCGLQGYIRDSA 1140
Query: 1141 FDPRRWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIA 1200
FDPRRWVAPG CT RPVPCKCGVDT EVPLDDKFC+EDPKVVLGKCCDKGHRW+VSKTIA
Sbjct: 1141 FDPRRWVAPGQCTNRPVPCKCGVDTVEVPLDDKFCTEDPKVVLGKCCDKGHRWVVSKTIA 1200
Query: 1201 DCAEALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLE 1260
DCAEALIGAY+VDGGIIAALHV+KWLGID DLDV LVVDAI SASLRSC L DTEIATLE
Sbjct: 1201 DCAEALIGAYFVDGGIIAALHVMKWLGIDVDLDVVLVVDAITSASLRSCPLGDTEIATLE 1260
Query: 1261 SKIGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPG 1320
SKIGY+FAVKGLLLEAITHTSDQ +GVNYCYQRLEFLGDSVLDLLITW+YYQKY DIDPG
Sbjct: 1261 SKIGYDFAVKGLLLEAITHTSDQEIGVNYCYQRLEFLGDSVLDLLITWHYYQKYLDIDPG 1320
Query: 1321 ELTDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQISEYVKYLSESHDAGKSLHGNK 1380
ELTDLRSASVNNE FAQVAVRRNLQ HLQHCSGLL+SQI+EYVKYLSESHD GK LHGNK
Sbjct: 1321 ELTDLRSASVNNENFAQVAVRRNLQHHLQHCSGLLMSQITEYVKYLSESHDTGKPLHGNK 1380
Query: 1381 GPKVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLG 1440
GPKVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTP VTPDKLELPPLRELIELCDSLG
Sbjct: 1381 GPKVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPFVTPDKLELPPLRELIELCDSLG 1440
Query: 1441 YFIKDKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSR 1500
YFIKDKCTRKGE FHAELRLQLQD LL+GEGYERTRKASRGEAA R+LVQLETRGISYSR
Sbjct: 1441 YFIKDKCTRKGETFHAELRLQLQDALLIGEGYERTRKASRGEAAHRLLVQLETRGISYSR 1500
Query: 1501 SGSKKRKQNPSCVEAAMVFSSSINCSTDACDPNSETPVIGPINLKKGGPRSTLFELCKKL 1560
S SKKRKQNPS EAAMV SS+NCST+ACDPN ETPVIGPINLKKGGPRSTLFELCKKL
Sbjct: 1501 SASKKRKQNPSHDEAAMVLPSSVNCSTEACDPNVETPVIGPINLKKGGPRSTLFELCKKL 1560
Query: 1561 QWPMPTFNTVENKSRVLIDIGEGSERRKGFNSYLSSIILQIPNAGCIECKGDARADKKSS 1620
QWPMPTFNTVENKSRV I+ GEG E+RKGFNS+LS+I LQIPNAG +EC+G+ARADKKSS
Sbjct: 1561 QWPMPTFNTVENKSRVQIEFGEGLEKRKGFNSFLSNITLQIPNAGYVECEGEARADKKSS 1620
Query: 1621 LDSASLVMLEELRQRGRVVINDS 1642
DSASLVML+EL+Q+GRV+INDS
Sbjct: 1621 FDSASLVMLQELQQQGRVIINDS 1640
BLAST of Carg27026 vs. TAIR 10
Match:
AT3G43920.2 (dicer-like 3 )
HSP 1 Score: 1490.3 bits (3857), Expect = 0.0e+00
Identity = 822/1637 (50.21%), Postives = 1084/1637 (66.22%), Query Frame = 0
Query: 5 EEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAVLETG 64
EE + KR F+++ D + D Y+++V+EV RN IAVL TG
Sbjct: 11 EEGGGSNSLKRKFSEIDGDQNLDSVSSPMMTDSN---GSYELKVYEVAKNRNIIAVLGTG 70
Query: 65 AGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYYGAMG 124
K+ I LIK +G S DK+ IIFLAPTV+LV QQ I+ + +V EY+GA G
Sbjct: 71 IDKSEITKRLIKAMG---SSDTDKRLIIFLAPTVNLVKQQCCEIRALVNLKVEEYFGAKG 130
Query: 125 VDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHPYTKI 184
VD W W++E S+ DVLVMTPQILLD LR A+ +L VCL+I+DECH TGNHPY K+
Sbjct: 131 VDKWTSQRWDEEFSKHDVLVMTPQILLDVLRSAFLKLEMVCLLIIDECHHTTGNHPYAKL 190
Query: 185 MKEFYHKSDNKPKIFGMTASPVIRKG-VSSSLDCECQIGELESILDSKIYAIEDKKEVEI 244
MKEFYH+S +KPKIFG+TAS VIRKG VSS + Q+ ELE ++DSKI+ E+++ VE
Sbjct: 191 MKEFYHESTSKPKIFGLTASAVIRKGIVSSPSNYAAQVSELERLMDSKIFNPEEREGVEK 250
Query: 245 YVPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKALKK 304
+ + KE I Y P+ S +LELK K+E KFD SL Q + + ++D+K + +K
Sbjct: 251 FATTVKEGPILYNPSPSCSLELKEKLETSHLKFDASLRRLQELGKDSFLNMDNKFETYQK 310
Query: 305 RLSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEALRVI 364
RLS D+ +I +CLD LG++CA+ A +V LE ++ E E +E S+ K+FLE+ L I
Sbjct: 311 RLSIDYREILHCLDNLGLICAHLAAEVCLEKISDTKEESETYKECSMVCKEFLEDILSTI 370
Query: 365 GESFPLGNENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERIIAAN 424
G P ++++ + + AV G++SPKL EL L +SF +Q CLI VERII A
Sbjct: 371 GVYLPQDDKSLVDLQQNHLSAVISGHVSPKLKELFHLLDSFRGDKQKQCLILVERIITAK 430
Query: 425 VIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVEEGL 484
VIERFVKK A+L++ V Y+T N S A K+Q E +LF+HGKVNLLF TDVVEEG
Sbjct: 431 VIERFVKKEASLAYLNVLYLTENNPSTNVSAQKMQIEIPDLFQHGKVNLLFITDVVEEGF 490
Query: 485 HVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDRSMT 544
VP+CS +V FDLPKT+ SY QS+ A+QSNS+ I+ LERGN KQR+ L D++R +
Sbjct: 491 QVPDCSCMVCFDLPKTMCSYSQSQKHAKQSNSKSIMFLERGNPKQRDHLHDLMRRE---- 550
Query: 545 EAAMSRDPDACMLKPFSIMETDSYIVEATGASVTADYSVGLIHQYCKKLPGDKYFSPKPI 604
+ +DP+A LK + + V+ G+ V D ++ + +
Sbjct: 551 --VLIQDPEAPNLKSCPPPVKNGHGVKEIGSMVIPDSNITVSEE---------------- 610
Query: 605 FQLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDHLLP 664
A+ QT+ P +RN L CKKL L+++LL
Sbjct: 611 ------------------AASTQTMSDPPSRNEQ-------LPPCKKLR----LDNNLLQ 670
Query: 665 SIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFDFSC 724
S E K +S+S AG+ KRKELHG T ALSGTWGE ++GATFQAYKFDF C
Sbjct: 671 S--NGKEKVASSKSKSSSSAAGSKKRKELHGTTCANALSGTWGENIDGATFQAYKFDFCC 730
Query: 725 SVIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAKCFQ 784
++ E +S F LLLES L +DVG E++LYL+ K+VKASVS GQ+ L E+++KAK FQ
Sbjct: 731 NISGEVYSSFSLLLESTLAEDVGKVEMDLYLVRKLVKASVSPCGQIRLSQEELVKAKYFQ 790
Query: 785 ELFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWKIHW 844
+ FFNG+FG+L +GSK G KR+FLLQ DT LW + M+LLLPV++ D +S I W
Sbjct: 791 QFFFNGMFGKLFVGSKSQGTKREFLLQTDTSSLWHPAFMFLLLPVETNDLASSA--TIDW 850
Query: 845 RAIDSCVSVVEFLKKNSSLDAERNCGATSDSSPSRNCSAETESNAASLIHFANCVLDVHS 904
AI+SC S+VEFLKKNS LD + G ++S + + + +LIHFAN D +S
Sbjct: 851 SAINSCASIVEFLKKNSLLDLRDSDGNQCNTSSGQEVLLDDKMEETNLIHFANASSDKNS 910
Query: 905 LKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGIMLSYPQ 964
L++ VV+AIHTG+IYSIVE V++SSA SPF+ + A Y T+A+YFNK+YGI+L++P
Sbjct: 911 LEELVVIAIHTGRIYSIVEAVSDSSAMSPFEVD---ASSGYATYAEYFNKKYGIVLAHPN 970
Query: 965 QPLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSA-FRKPQMHVHMPPELVLSMDVPKGVL 1024
QPL++LKQSH+ HNLLV+F +E V + ++G+ RKP +H H+PPEL+ +DVP+ VL
Sbjct: 971 QPLMKLKQSHHAHNLLVDFNEEMVVKTEPKAGNVRKRKPNIHAHLPPELLARIDVPRAVL 1030
Query: 1025 KSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERLEL 1084
KS YLLPS+MHR ESLMLASQLR+EI+ ++ ISS+ ILEA+TTL ESFS ERLEL
Sbjct: 1031 KSIYLLPSVMHRLESLMLASQLREEIDCSIDNFSISSTSILEAVTTLTCPESFSMERLEL 1090
Query: 1085 LGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFDPR 1144
LGDSVLKY SCHLFLK+P+K EGQLS +RQ +I N+ LH L T KLQGYIR+ AF+PR
Sbjct: 1091 LGDSVLKYVASCHLFLKYPDKDEGQLSRQRQSIISNSNLHRLTTSRKLQGYIRNGAFEPR 1150
Query: 1145 RWVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADCAE 1204
RW APG +L PVPCKCG+DT EVPLD KF +E+ + +GK CD GHRW+VSK+++DCAE
Sbjct: 1151 RWTAPGQFSLFPVPCKCGIDTREVPLDPKFFTENMTIKIGKSCDMGHRWVVSKSVSDCAE 1210
Query: 1205 ALIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESKIG 1264
ALIGAYYV GG+ A+LH++KWLGID D D LVV+AI SLR K+ E+ LE KI
Sbjct: 1211 ALIGAYYVSGGLSASLHMMKWLGIDVDFDPNLVVEAINRVSLRCYIPKEDELIELERKIQ 1270
Query: 1265 YEFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGELTD 1324
+EF+ K LL EAITH+S L +Y Y+RLEFLGDSVLD LIT + + Y PGE+TD
Sbjct: 1271 HEFSAKFLLKEAITHSS---LRESYSYERLEFLGDSVLDFLITRHLFNTYEQTGPGEMTD 1330
Query: 1325 LRSASVNNETFAQVAVRRNLQQHLQHCSGLLISQISEYVKYLSESHDAGKSLHGNKGPKV 1384
LRSA VNNE FAQVAV+ NL HLQ C+ +L +QI++Y+ + + G+S+ +GPK
Sbjct: 1331 LRSACVNNENFAQVAVKNNLHTHLQRCATVLETQINDYLMSFQKPDETGRSIPSIQGPKA 1390
Query: 1385 LGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYFIK 1444
LGD+VESIAGA+LIDT+L+LD+VW++++PLL+PLVTPDKL+LPP REL ELCDSLGYF +
Sbjct: 1391 LGDVVESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQLPPYRELNELCDSLGYFFR 1450
Query: 1445 DKCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSGSK 1504
KC+ G A ++LQL DVLL G+G E+T K + G+AA +L QLE R I SR S
Sbjct: 1451 VKCSNDGVKAQATIQLQLDDVLLTGDGSEQTNKLALGKAASHLLTQLEKRNI--SRKTSL 1510
Query: 1505 KRKQNPSCVEAAMVFSSSINCSTDACDPNS-ETPVIGPINLKKGGPRSTLFELCKKLQWP 1564
Q+ V A S +++ + S P IGPIN+KKGGPR TL E CKK WP
Sbjct: 1511 GDNQSSMDVNLACNHSDRETLTSETTEIQSIVIPFIGPINMKKGGPRGTLHEFCKKHLWP 1570
Query: 1565 MPTFNTVENKSRVLIDIGEGSERRKGFNSYLSSIILQIPNAGCIECKGDARADKKSSLDS 1624
MPTF+T E KSR + +G E+R F+S+ S+I L+IPN + G+AR DKKSS DS
Sbjct: 1571 MPTFDTSEEKSRTPFEFIDGGEKRTSFSSFTSTITLRIPNREAVMYAGEARPDKKSSFDS 1578
Query: 1625 ASLVMLEELRQRGRVVI 1639
A + +L EL +R V+I
Sbjct: 1631 AVVELLYELERRKIVII 1578
BLAST of Carg27026 vs. TAIR 10
Match:
AT3G43920.3 (dicer-like 3 )
HSP 1 Score: 1482.2 bits (3836), Expect = 0.0e+00
Identity = 818/1636 (50.00%), Postives = 1079/1636 (65.95%), Query Frame = 0
Query: 5 EEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAVLETG 64
EE + KR F+++ D + D Y+++V+EV RN IAVL TG
Sbjct: 11 EEGGGSNSLKRKFSEIDGDQNLDSVSSPMMTDSN---GSYELKVYEVAKNRNIIAVLGTG 70
Query: 65 AGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYYGAMG 124
K+ I LIK +G S DK+ IIFLAPTV+LV QQ I+ + +V EY+GA G
Sbjct: 71 IDKSEITKRLIKAMG---SSDTDKRLIIFLAPTVNLVKQQCCEIRALVNLKVEEYFGAKG 130
Query: 125 VDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHPYTKI 184
VD W W++E S+ DVLVMTPQILLD LR A+ +L VCL+I+DECH TGNHPY K+
Sbjct: 131 VDKWTSQRWDEEFSKHDVLVMTPQILLDVLRSAFLKLEMVCLLIIDECHHTTGNHPYAKL 190
Query: 185 MKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKEVEIY 244
MKEFYH+S +KPKIFG+TAS VIRK Q+ ELE ++DSKI+ E+++ VE +
Sbjct: 191 MKEFYHESTSKPKIFGLTASAVIRK---------AQVSELERLMDSKIFNPEEREGVEKF 250
Query: 245 VPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKALKKR 304
+ KE I Y P+ S +LELK K+E KFD SL Q + + ++D+K + +KR
Sbjct: 251 ATTVKEGPILYNPSPSCSLELKEKLETSHLKFDASLRRLQELGKDSFLNMDNKFETYQKR 310
Query: 305 LSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEALRVIG 364
LS D+ +I +CLD LG++CA+ A +V LE ++ E E +E S+ K+FLE+ L IG
Sbjct: 311 LSIDYREILHCLDNLGLICAHLAAEVCLEKISDTKEESETYKECSMVCKEFLEDILSTIG 370
Query: 365 ESFPLGNENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERIIAANV 424
P ++++ + + AV G++SPKL EL L +SF +Q CLI VERII A V
Sbjct: 371 VYLPQDDKSLVDLQQNHLSAVISGHVSPKLKELFHLLDSFRGDKQKQCLILVERIITAKV 430
Query: 425 IERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVEEGLH 484
IERFVKK A+L++ V Y+T N S A K+Q E +LF+HGKVNLLF TDVVEEG
Sbjct: 431 IERFVKKEASLAYLNVLYLTENNPSTNVSAQKMQIEIPDLFQHGKVNLLFITDVVEEGFQ 490
Query: 485 VPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDRSMTE 544
VP+CS +V FDLPKT+ SY QS+ A+QSNS+ I+ LERGN KQR+ L D++R +
Sbjct: 491 VPDCSCMVCFDLPKTMCSYSQSQKHAKQSNSKSIMFLERGNPKQRDHLHDLMRRE----- 550
Query: 545 AAMSRDPDACMLKPFSIMETDSYIVEATGASVTADYSVGLIHQYCKKLPGDKYFSPKPIF 604
+ +DP+A LK + + V+ G+ V D ++ + +
Sbjct: 551 -VLIQDPEAPNLKSCPPPVKNGHGVKEIGSMVIPDSNITVSEE----------------- 610
Query: 605 QLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDHLLPS 664
A+ QT+ P +RN L CKKL L+++LL S
Sbjct: 611 -----------------AASTQTMSDPPSRNEQ-------LPPCKKLR----LDNNLLQS 670
Query: 665 IEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFDFSCS 724
E K +S+S AG+ KRKELHG T ALSGTWGE ++GATFQAYKFDF C+
Sbjct: 671 --NGKEKVASSKSKSSSSAAGSKKRKELHGTTCANALSGTWGENIDGATFQAYKFDFCCN 730
Query: 725 VIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAKCFQE 784
+ E +S F LLLES L +DVG E++LYL+ K+VKASVS GQ+ L E+++KAK FQ+
Sbjct: 731 ISGEVYSSFSLLLESTLAEDVGKVEMDLYLVRKLVKASVSPCGQIRLSQEELVKAKYFQQ 790
Query: 785 LFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWKIHWR 844
FFNG+FG+L +GSK G KR+FLLQ DT LW + M+LLLPV++ D +S I W
Sbjct: 791 FFFNGMFGKLFVGSKSQGTKREFLLQTDTSSLWHPAFMFLLLPVETNDLASSA--TIDWS 850
Query: 845 AIDSCVSVVEFLKKNSSLDAERNCGATSDSSPSRNCSAETESNAASLIHFANCVLDVHSL 904
AI+SC S+VEFLKKNS LD + G ++S + + + +LIHFAN D +SL
Sbjct: 851 AINSCASIVEFLKKNSLLDLRDSDGNQCNTSSGQEVLLDDKMEETNLIHFANASSDKNSL 910
Query: 905 KDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGIMLSYPQQ 964
++ VV+AIHTG+IYSIVE V++SSA SPF+ + A Y T+A+YFNK+YGI+L++P Q
Sbjct: 911 EELVVIAIHTGRIYSIVEAVSDSSAMSPFEVD---ASSGYATYAEYFNKKYGIVLAHPNQ 970
Query: 965 PLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSA-FRKPQMHVHMPPELVLSMDVPKGVLK 1024
PL++LKQSH+ HNLLV+F +E V + ++G+ RKP +H H+PPEL+ +DVP+ VLK
Sbjct: 971 PLMKLKQSHHAHNLLVDFNEEMVVKTEPKAGNVRKRKPNIHAHLPPELLARIDVPRAVLK 1030
Query: 1025 SSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERLELL 1084
S YLLPS+MHR ESLMLASQLR+EI+ ++ ISS+ ILEA+TTL ESFS ERLELL
Sbjct: 1031 SIYLLPSVMHRLESLMLASQLREEIDCSIDNFSISSTSILEAVTTLTCPESFSMERLELL 1090
Query: 1085 GDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFDPRR 1144
GDSVLKY SCHLFLK+P+K EGQLS +RQ +I N+ LH L T KLQGYIR+ AF+PRR
Sbjct: 1091 GDSVLKYVASCHLFLKYPDKDEGQLSRQRQSIISNSNLHRLTTSRKLQGYIRNGAFEPRR 1150
Query: 1145 WVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADCAEA 1204
W APG +L PVPCKCG+DT EVPLD KF +E+ + +GK CD GHRW+VSK+++DCAEA
Sbjct: 1151 WTAPGQFSLFPVPCKCGIDTREVPLDPKFFTENMTIKIGKSCDMGHRWVVSKSVSDCAEA 1210
Query: 1205 LIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESKIGY 1264
LIGAYYV GG+ A+LH++KWLGID D D LVV+AI SLR K+ E+ LE KI +
Sbjct: 1211 LIGAYYVSGGLSASLHMMKWLGIDVDFDPNLVVEAINRVSLRCYIPKEDELIELERKIQH 1270
Query: 1265 EFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGELTDL 1324
EF+ K LL EAITH+S L +Y Y+RLEFLGDSVLD LIT + + Y PGE+TDL
Sbjct: 1271 EFSAKFLLKEAITHSS---LRESYSYERLEFLGDSVLDFLITRHLFNTYEQTGPGEMTDL 1330
Query: 1325 RSASVNNETFAQVAVRRNLQQHLQHCSGLLISQISEYVKYLSESHDAGKSLHGNKGPKVL 1384
RSA VNNE FAQVAV+ NL HLQ C+ +L +QI++Y+ + + G+S+ +GPK L
Sbjct: 1331 RSACVNNENFAQVAVKNNLHTHLQRCATVLETQINDYLMSFQKPDETGRSIPSIQGPKAL 1390
Query: 1385 GDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYFIKD 1444
GD+VESIAGA+LIDT+L+LD+VW++++PLL+PLVTPDKL+LPP REL ELCDSLGYF +
Sbjct: 1391 GDVVESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQLPPYRELNELCDSLGYFFRV 1450
Query: 1445 KCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSGSKK 1504
KC+ G A ++LQL DVLL G+G E+T K + G+AA +L QLE R I SR S
Sbjct: 1451 KCSNDGVKAQATIQLQLDDVLLTGDGSEQTNKLALGKAASHLLTQLEKRNI--SRKTSLG 1510
Query: 1505 RKQNPSCVEAAMVFSSSINCSTDACDPNS-ETPVIGPINLKKGGPRSTLFELCKKLQWPM 1564
Q+ V A S +++ + S P IGPIN+KKGGPR TL E CKK WPM
Sbjct: 1511 DNQSSMDVNLACNHSDRETLTSETTEIQSIVIPFIGPINMKKGGPRGTLHEFCKKHLWPM 1568
Query: 1565 PTFNTVENKSRVLIDIGEGSERRKGFNSYLSSIILQIPNAGCIECKGDARADKKSSLDSA 1624
PTF+T E KSR + +G E+R F+S+ S+I L+IPN + G+AR DKKSS DSA
Sbjct: 1571 PTFDTSEEKSRTPFEFIDGGEKRTSFSSFTSTITLRIPNREAVMYAGEARPDKKSSFDSA 1568
Query: 1625 SLVMLEELRQRGRVVI 1639
+ +L EL +R V+I
Sbjct: 1631 VVELLYELERRKIVII 1568
BLAST of Carg27026 vs. TAIR 10
Match:
AT3G43920.1 (dicer-like 3 )
HSP 1 Score: 1407.1 bits (3641), Expect = 0.0e+00
Identity = 791/1636 (48.35%), Postives = 1046/1636 (63.94%), Query Frame = 0
Query: 5 EEENCDGARKRSFNDMKSSVTSDKTNFDKPMDEGFIPRRYQMEVFEVGMKRNTIAVLETG 64
EE + KR F+++ D + D Y+++V+EV RN IAVL TG
Sbjct: 11 EEGGGSNSLKRKFSEIDGDQNLDSVSSPMMTDSN---GSYELKVYEVAKNRNIIAVLGTG 70
Query: 65 AGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLVHQQFNVIKVQTDFEVAEYYGAMG 124
K+ I LIK +G S DK+ IIFLAPTV+L Q I+ + +V EY+GA G
Sbjct: 71 IDKSEITKRLIKAMG---SSDTDKRLIIFLAPTVNL---QCCEIRALVNLKVEEYFGAKG 130
Query: 125 VDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTVCLMIMDECHRATGNHPYTKI 184
VD W W++E S+ DVLVMTPQILLD LR A+ +L VCL+I+DECH TGNHPY K+
Sbjct: 131 VDKWTSQRWDEEFSKHDVLVMTPQILLDVLRSAFLKLEMVCLLIIDECHHTTGNHPYAKL 190
Query: 185 MKEFYHKSDNKPKIFGMTASPVIRKGVSSSLDCECQIGELESILDSKIYAIEDKKEVEIY 244
M KI+ E+++ VE +
Sbjct: 191 M---------------------------------------------KIFNPEEREGVEKF 250
Query: 245 VPSAKETCIFYEPAKSLTLELKAKIEALWSKFDTSLSNSQVALQVHYKDVDSKLKALKKR 304
+ KE I Y P+ S +LELK K+E KFD SL Q + + ++D+K + +KR
Sbjct: 251 ATTVKEGPILYNPSPSCSLELKEKLETSHLKFDASLRRLQELGKDSFLNMDNKFETYQKR 310
Query: 305 LSSDHFKISYCLDELGVLCAYEAIKVLLENVNIPNNEYELSRESSLQYKQFLEEALRVIG 364
LS D+ +I +CLD LG++CA+ A +V LE ++ E E +E S+ K+FLE+ L IG
Sbjct: 311 LSIDYREILHCLDNLGLICAHLAAEVCLEKISDTKEESETYKECSMVCKEFLEDILSTIG 370
Query: 365 ESFPLGNENIPNFGFDFQKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERIIAANV 424
P ++++ + + AV G++SPKL EL L +SF +Q CLI VERII A V
Sbjct: 371 VYLPQDDKSLVDLQQNHLSAVISGHVSPKLKELFHLLDSFRGDKQKQCLILVERIITAKV 430
Query: 425 IERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLFSTDVVEEGLH 484
IERFVKK A+L++ V Y+T N S A K+Q E +LF+HGKVNLLF TDVVEEG
Sbjct: 431 IERFVKKEASLAYLNVLYLTENNPSTNVSAQKMQIEIPDLFQHGKVNLLFITDVVEEGFQ 490
Query: 485 VPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFDVIRSDRSMTE 544
VP+CS +V FDLPKT+ SY QS+ A+QSNS+ I+ LERGN KQR+ L D++R +
Sbjct: 491 VPDCSCMVCFDLPKTMCSYSQSQKHAKQSNSKSIMFLERGNPKQRDHLHDLMRRE----- 550
Query: 545 AAMSRDPDACMLKPFSIMETDSYIVEATGASVTADYSVGLIHQYCKKLPGDKYFSPKPIF 604
+ +DP+A LK + + V+ G+ V D ++ + +
Sbjct: 551 -VLIQDPEAPNLKSCPPPVKNGHGVKEIGSMVIPDSNITVSEE----------------- 610
Query: 605 QLSYCEGSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDHLLPS 664
A+ QT+ P +RN L CKKL L+++LL S
Sbjct: 611 -----------------AASTQTMSDPPSRNEQ-------LPPCKKLR----LDNNLLQS 670
Query: 665 IEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGTWGEKVEGATFQAYKFDFSCS 724
E K +S+S AG+ KRKELHG T ALSGTWGE ++GATFQAYKFDF C+
Sbjct: 671 --NGKEKVASSKSKSSSSAAGSKKRKELHGTTCANALSGTWGENIDGATFQAYKFDFCCN 730
Query: 725 VIYEHFSGFVLLLESKLDDDVGNFELELYLISKMVKASVSFAGQVHLDAEQIMKAKCFQE 784
+ E +S F LLLES L +DVG E++LYL+ K+VKASVS GQ+ L E+++KAK FQ+
Sbjct: 731 ISGEVYSSFSLLLESTLAEDVGKVEMDLYLVRKLVKASVSPCGQIRLSQEELVKAKYFQQ 790
Query: 785 LFFNGLFGRLLIGSKLTGKKRDFLLQKDTKPLWITSNMYLLLPVDSPDASSDDIWKIHWR 844
FFNG+FG+L +GSK G KR+FLLQ DT LW + M+LLLPV++ D +S I W
Sbjct: 791 FFFNGMFGKLFVGSKSQGTKREFLLQTDTSSLWHPAFMFLLLPVETNDLASSA--TIDWS 850
Query: 845 AIDSCVSVVEFLKKNSSLDAERNCGATSDSSPSRNCSAETESNAASLIHFANCVLDVHSL 904
AI+SC S+VEFLKKNS LD + G ++S + + + +LIHFAN D +SL
Sbjct: 851 AINSCASIVEFLKKNSLLDLRDSDGNQCNTSSGQEVLLDDKMEETNLIHFANASSDKNSL 910
Query: 905 KDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSDKAPPDYITFADYFNKRYGIMLSYPQQ 964
++ VV+AIHTG+IYSIVE V++SSA SPF+ + A Y T+A+YFNK+YGI+L++P Q
Sbjct: 911 EELVVIAIHTGRIYSIVEAVSDSSAMSPFEVD---ASSGYATYAEYFNKKYGIVLAHPNQ 970
Query: 965 PLLRLKQSHNPHNLLVNFKDEGVTSDKLQSGSA-FRKPQMHVHMPPELVLSMDVPKGVLK 1024
PL++LKQSH+ HNLLV+F +E V + ++G+ RKP +H H+PPEL+ +DVP+ VLK
Sbjct: 971 PLMKLKQSHHAHNLLVDFNEEMVVKTEPKAGNVRKRKPNIHAHLPPELLARIDVPRAVLK 1030
Query: 1025 SSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSFERLELL 1084
S YLLPS+MHR ESLMLASQLR+EI+ ++ ISS+ ILEA+TTL ESFS ERLELL
Sbjct: 1031 SIYLLPSVMHRLESLMLASQLREEIDCSIDNFSISSTSILEAVTTLTCPESFSMERLELL 1090
Query: 1085 GDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCKLQGYIRDSAFDPRR 1144
GDSVLKY SCHLFLK+P+K EGQLS +RQ +I N+ LH L T KLQGYIR+ AF+PRR
Sbjct: 1091 GDSVLKYVASCHLFLKYPDKDEGQLSRQRQSIISNSNLHRLTTSRKLQGYIRNGAFEPRR 1150
Query: 1145 WVAPGHCTLRPVPCKCGVDTAEVPLDDKFCSEDPKVVLGKCCDKGHRWLVSKTIADCAEA 1204
W APG +L PVPCKCG+DT EVPLD KF +E+ + +GK CD GHRW+VSK+++DCAEA
Sbjct: 1151 WTAPGQFSLFPVPCKCGIDTREVPLDPKFFTENMTIKIGKSCDMGHRWVVSKSVSDCAEA 1210
Query: 1205 LIGAYYVDGGIIAALHVIKWLGIDADLDVALVVDAIASASLRSCNLKDTEIATLESKIGY 1264
LIGAYYV GG+ A+LH++KWLGID D D LVV+AI SLR K+ E+ LE KI +
Sbjct: 1211 LIGAYYVSGGLSASLHMMKWLGIDVDFDPNLVVEAINRVSLRCYIPKEDELIELERKIQH 1270
Query: 1265 EFAVKGLLLEAITHTSDQGLGVNYCYQRLEFLGDSVLDLLITWYYYQKYSDIDPGELTDL 1324
EF+ K LL EAITH+S L +Y Y+RLEFLGDSVLD LIT + + Y PGE+TDL
Sbjct: 1271 EFSAKFLLKEAITHSS---LRESYSYERLEFLGDSVLDFLITRHLFNTYEQTGPGEMTDL 1330
Query: 1325 RSASVNNETFAQVAVRRNLQQHLQHCSGLLISQISEYVKYLSESHDAGKSLHGNKGPKVL 1384
RSA VNNE FAQVAV+ NL HLQ C+ +L +QI++Y+ + + G+S+ +GPK L
Sbjct: 1331 RSACVNNENFAQVAVKNNLHTHLQRCATVLETQINDYLMSFQKPDETGRSIPSIQGPKAL 1390
Query: 1385 GDMVESIAGAILIDTKLNLDEVWKIYKPLLTPLVTPDKLELPPLRELIELCDSLGYFIKD 1444
GD+VESIAGA+LIDT+L+LD+VW++++PLL+PLVTPDKL+LPP REL ELCDSLGYF +
Sbjct: 1391 GDVVESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQLPPYRELNELCDSLGYFFRV 1450
Query: 1445 KCTRKGEIFHAELRLQLQDVLLVGEGYERTRKASRGEAAQRILVQLETRGISYSRSGSKK 1504
KC+ G A ++LQL DVLL G+G E+T K + G+AA +L QLE R I SR S
Sbjct: 1451 KCSNDGVKAQATIQLQLDDVLLTGDGSEQTNKLALGKAASHLLTQLEKRNI--SRKTSLG 1510
Query: 1505 RKQNPSCVEAAMVFSSSINCSTDACDPNS-ETPVIGPINLKKGGPRSTLFELCKKLQWPM 1564
Q+ V A S +++ + S P IGPIN+KKGGPR TL E CKK WPM
Sbjct: 1511 DNQSSMDVNLACNHSDRETLTSETTEIQSIVIPFIGPINMKKGGPRGTLHEFCKKHLWPM 1529
Query: 1565 PTFNTVENKSRVLIDIGEGSERRKGFNSYLSSIILQIPNAGCIECKGDARADKKSSLDSA 1624
PTF+T E KSR + +G E+R F+S+ S+I L+IPN + G+AR DKKSS DSA
Sbjct: 1571 PTFDTSEEKSRTPFEFIDGGEKRTSFSSFTSTITLRIPNREAVMYAGEARPDKKSSFDSA 1529
Query: 1625 SLVMLEELRQRGRVVI 1639
+ +L EL +R V+I
Sbjct: 1631 VVELLYELERRKIVII 1529
BLAST of Carg27026 vs. TAIR 10
Match:
AT1G01040.1 (dicer-like 1 )
HSP 1 Score: 797.7 bits (2059), Expect = 1.7e-230
Identity = 580/1722 (33.68%), Postives = 865/1722 (50.23%), Query Frame = 0
Query: 42 RRYQMEVFEVGMKRNTIAVLETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLV 101
RRYQ++V E +NTIA LETGAGKT+IA++LIK + K + S K +FL P V LV
Sbjct: 250 RRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPLV 309
Query: 102 HQQFNVIKVQTDFEVAEYYGAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRL 161
+QQ VI+ QT F+V Y G MG D W+ W++E + VLVMT QILL+ LR + R+
Sbjct: 310 YQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLNILRHSIIRM 369
Query: 162 GTVCLMIMDECHRATGNHPYTKIMKEFYHKS--DNKPKIFGMTASPVIRKGVSSSLDCEC 221
T+ L+I+DECH A HPY+ +M EFYH + D +P IFGMTASPV KGVSS +DC
Sbjct: 370 ETIDLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPAIFGMTASPVNLKGVSSQVDCAI 429
Query: 222 QIGELESILDSKIYAIEDKKEVEIYVPSAKETCIFYEPAK---SLTLELKAKIEALWSKF 281
+I LE+ LDS + I+D+KE+E +VP E + Y+ A SL +K I A+
Sbjct: 430 KIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQMIAAVEEAA 489
Query: 282 DTSLSNSQ----VALQVHYKDVDSKLKALKKRLSSDHF--------KISYCLDELGVLCA 341
S S+ A KD ++ + +R SD I+Y L ELG CA
Sbjct: 490 QASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHKLRAINYTLAELGQWCA 549
Query: 342 YEAIKVLLE----------NVNIPNNEYELSRESSLQYKQFLEEA-----LRVIG----- 401
Y+ + L V++ E LS SL + LE A +G
Sbjct: 550 YKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEGAAAEKVAAEVGKPENG 609
Query: 402 ------ESFPLGNENIPNFGFDFQK----AVDLGYISPKLFELLQLFESFGVSRQVLCLI 461
E L ++ + + G + AV G ++PK+ L++L + + ++
Sbjct: 610 NAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQSLIKLLLKYQHTADFRAIV 669
Query: 462 FVERIIAANVIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLF 521
FVER++AA V+ + ++ +LS + + G N S + ++Q +T+ FR G V LL
Sbjct: 670 FVERVVAALVLPKVFAELPSLSFIRCASMIGHNNSQEMKSSQMQ-DTISKFRDGHVTLLV 729
Query: 522 STDVVEEGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFD 581
+T V EEGL + C+ V+RFDL KTV +Y+QSRGRAR+ S YIL++ERGNV L +
Sbjct: 730 ATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNVSHAAFLRN 789
Query: 582 VIRSDRSMTEAAMSRD-----PDACMLKPFSIMETDSYIVEATGASVTADYSVGLIHQYC 641
S+ ++ + A+ R D L + Y VEATGA V+ + +VGL+H YC
Sbjct: 790 ARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMVSLNSAVGLVHFYC 849
Query: 642 KKLPGDKYFSPKPIFQLSYCE-----GSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVC 701
+LPGD+Y +P F + E Y CRL LP A F+ + GP + L++Q VC
Sbjct: 850 SQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFEILEGPVCSSMRLAQQAVC 909
Query: 702 LEACKKLHQMGALNDHLLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGT 761
L ACKKLH+MGA D LLP + + + + GT + +E + L G
Sbjct: 910 LAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGTARHREFYPEGVADVLKGE 969
Query: 762 W---GEKV--EGATFQAYKFDFSC-------SVIYEHFSGFVLLLESKLDDDVGNFELEL 821
W G++V F Y ++ C S F +L ++LD +V + ++L
Sbjct: 970 WVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEVSEFAILFGNELDAEVLSMSMDL 1029
Query: 822 YLISKMV-KASVSFAGQVHLDAEQIMKAKCFQELFFNGLFGRLLIGSKLTGKKRDFLLQK 881
Y+ M+ KAS++F G + + Q+ K F +L D ++
Sbjct: 1030 YVARAMITKASLAFKGSLDITENQLSSLKKFH--------------VRLMSIVLDVDVEP 1089
Query: 882 DTKPLWITSNMYLLLPVDSPDASSDDIWKIHWRAIDSCVSV------------------- 941
T P W + YL +PV + + S + I I+W ++
Sbjct: 1090 STTP-WDPAKAYLFVPV-TDNTSMEPIKGINWELVEKITKTTAWDNPLQRARPDVYLGTN 1149
Query: 942 -------------------VEFLKKNSSLDAERNCGATSD------SSPSRNC---SAET 1001
+ F +K+ R A+ D P R+ E
Sbjct: 1150 ERTLGGDRREYGFGKLRHNIVFGQKSHPTYGIRGAVASFDVVRASGLLPVRDAFEKEVEE 1209
Query: 1002 ESNAASLIHFANCVLDVHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSD-KAPPD 1061
+ + L+ C++ L ++V A H+GK + + + + SAE+ F P +
Sbjct: 1210 DLSKGKLMMADGCMV-AEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLE 1269
Query: 1062 YITFADYFNKRYGIMLSYPQQPLLRLKQSHNPHNLL-VNFKDEGVTSDKLQSGSAFRKPQ 1121
Y T+ADY+ ++YG+ L+ QQPL++ + NLL F+ G + L
Sbjct: 1270 YNTYADYYKQKYGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGESETVLDK-------T 1329
Query: 1122 MHVHMPPELVLSMDVPKGVLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLI 1181
+V +PPEL + + +++ + LPS+M R ES++LA QL+ I+Y I +S I
Sbjct: 1330 YYVFLPPELCVVHPLSGSLIRGAQRLPSIMRRVESMLLAVQLKNLISYP-----IPTSKI 1389
Query: 1182 LEALTTLGSCESFSFERLELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLH 1241
LEALT E+F +ER ELLGD+ LK+ VS LFLK+P+KHEGQL+ RQQ++ N L+
Sbjct: 1390 LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLY 1449
Query: 1242 ALGTKCKLQGYIRDSAFDPRRWVAPGHCTLRPVPCKCG----VDTAEVPLDDKFCS--ED 1301
LQ YI+ F P RW APG + K G D + P+ ++ ED
Sbjct: 1450 QFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSSFFDEEQKPVSEENSDVFED 1509
Query: 1302 PKVVLGKCCD--KGHRWLVSKTIADCAEALIGAYYVDGGIIAALHVIKWLGIDADLDVAL 1361
++ G+ +R L SKT+AD EALIG YYV+GG IAA H++KW+GI + D
Sbjct: 1510 GEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDE 1569
Query: 1362 VVDAIASASLRSCNLKDTEIATLESKIGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLEF 1421
V + + ++ LK + LE + YEF KGLL+EAITH S GV+ CYQRLEF
Sbjct: 1570 VDGTLKNVNVPESVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVS-CYQRLEF 1629
Query: 1422 LGDSVLDLLITWYYYQKYSDIDPGELTDLRSASVNNETFAQVAVRRNLQQHLQHCSGLLI 1481
+GD+VLD LIT + + Y+ + PG LTDLR+A+VNNE FA+VAV+ L +L+H S L
Sbjct: 1630 VGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALE 1689
Query: 1482 SQISEYVKYL-SESHDAGKSLHG---NKGPKVLGDMVESIAGAILIDTKLNLDEVWKIYK 1541
QI E+VK + +ES G + G K PKVLGD+VESIAGAI +D+ + WK+++
Sbjct: 1690 KQIREFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQ 1749
Query: 1542 PLLTPLVTPDKLELPPLRELIELCDSLGYFIKDKCTRKGEIFHAELRLQLQDVLLVGEGY 1601
PLL P+VTP+ L + P+REL E C ++ K +R G E+ + D + VG
Sbjct: 1750 PLLQPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNTATVEVFI---DGVQVGVAQ 1809
Query: 1602 ERTRKASRGEAAQRILVQLETRGISYSRSGSKKRKQNPSCVEAAMVFSSSINCSTDACDP 1633
+K ++ AA+ L L+ + I+ S+ IN + +A +
Sbjct: 1810 NPQKKMAQKLAARNALAALKEKEIAESK-------------------EKHIN-NGNAGED 1869
BLAST of Carg27026 vs. TAIR 10
Match:
AT1G01040.2 (dicer-like 1 )
HSP 1 Score: 793.5 bits (2048), Expect = 3.2e-229
Identity = 580/1723 (33.66%), Postives = 865/1723 (50.20%), Query Frame = 0
Query: 42 RRYQMEVFEVGMKRNTIAVLETGAGKTMIAVMLIKEIGKAMKSSGDKKFIIFLAPTVHLV 101
RRYQ++V E +NTIA LETGAGKT+IA++LIK + K + S K +FL P V LV
Sbjct: 250 RRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPLV 309
Query: 102 HQQFNVIKVQTDFEVAEYYGAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRL 161
+QQ VI+ QT F+V Y G MG D W+ W++E + VLVMT QILL+ LR + R+
Sbjct: 310 YQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLNILRHSIIRM 369
Query: 162 GTVCLMIMDECHRATGNHPYTKIMKEFYHKS--DNKPKIFGMTASPVIRKGVSSSLDCEC 221
T+ L+I+DECH A HPY+ +M EFYH + D +P IFGMTASPV KGVSS +DC
Sbjct: 370 ETIDLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPAIFGMTASPVNLKGVSSQVDCAI 429
Query: 222 QIGELESILDSKIYAIEDKKEVEIYVPSAKETCIFYEPAK---SLTLELKAKIEALWSKF 281
+I LE+ LDS + I+D+KE+E +VP E + Y+ A SL +K I A+
Sbjct: 430 KIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQMIAAVEEAA 489
Query: 282 DTSLSNSQ----VALQVHYKDVDSKLKALKKRLSSDHF--------KISYCLDELGVLCA 341
S S+ A KD ++ + +R SD I+Y L ELG CA
Sbjct: 490 QASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHKLRAINYTLAELGQWCA 549
Query: 342 YEAIKVLLE----------NVNIPNNEYELSRESSLQYKQFLEEA-----LRVIG----- 401
Y+ + L V++ E LS SL + LE A +G
Sbjct: 550 YKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEGAAAEKVAAEVGKPENG 609
Query: 402 ------ESFPLGNENIPNFGFDFQK----AVDLGYISPKLFELLQLFESFGVSRQVLCLI 461
E L ++ + + G + AV G ++PK+ L++L + + ++
Sbjct: 610 NAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQSLIKLLLKYQHTADFRAIV 669
Query: 462 FVERIIAANVIERFVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFRHGKVNLLF 521
FVER++AA V+ + ++ +LS + + G N S + ++Q +T+ FR G V LL
Sbjct: 670 FVERVVAALVLPKVFAELPSLSFIRCASMIGHNNSQEMKSSQMQ-DTISKFRDGHVTLLV 729
Query: 522 STDVVEEGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQSNSQYILLLERGNVKQREQLFD 581
+T V EEGL + C+ V+RFDL KTV +Y+QSRGRAR+ S YIL++ERGNV L +
Sbjct: 730 ATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNVSHAAFLRN 789
Query: 582 VIRSDRSMTEAAMSRD-----PDACMLKPFSIMETDSYIVEATGASVTADYSVGLIHQYC 641
S+ ++ + A+ R D L + Y VEATGA V+ + +VGL+H YC
Sbjct: 790 ARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMVSLNSAVGLVHFYC 849
Query: 642 KKLPGDKYFSPKPIFQLSYCE-----GSYECRLILPPTAAFQTIVGPSTRNSNLSKQLVC 701
+LPGD+Y +P F + E Y CRL LP A F+ + GP + L++Q VC
Sbjct: 850 SQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFEILEGPVCSSMRLAQQAVC 909
Query: 702 LEACKKLHQMGALNDHLLPSIEEISEFDMGLKCNASTSGAGTTKRKELHGRTAIRALSGT 761
L ACKKLH+MGA D LLP + + + + GT + +E + L G
Sbjct: 910 LAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGTARHREFYPEGVADVLKGE 969
Query: 762 W---GEKV--EGATFQAYKFDFSC-------SVIYEHFSGFVLLLESKLDDDVG-NFELE 821
W G++V F Y ++ C S F +L ++LD +V + ++
Sbjct: 970 WVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEVSEFAILFGNELDAEVVLSMSMD 1029
Query: 822 LYLISKMV-KASVSFAGQVHLDAEQIMKAKCFQELFFNGLFGRLLIGSKLTGKKRDFLLQ 881
LY+ M+ KAS++F G + + Q+ K F +L D ++
Sbjct: 1030 LYVARAMITKASLAFKGSLDITENQLSSLKKFH--------------VRLMSIVLDVDVE 1089
Query: 882 KDTKPLWITSNMYLLLPVDSPDASSDDIWKIHWRAIDSCVSV------------------ 941
T P W + YL +PV + + S + I I+W ++
Sbjct: 1090 PSTTP-WDPAKAYLFVPV-TDNTSMEPIKGINWELVEKITKTTAWDNPLQRARPDVYLGT 1149
Query: 942 --------------------VEFLKKNSSLDAERNCGATSD------SSPSRNC---SAE 1001
+ F +K+ R A+ D P R+ E
Sbjct: 1150 NERTLGGDRREYGFGKLRHNIVFGQKSHPTYGIRGAVASFDVVRASGLLPVRDAFEKEVE 1209
Query: 1002 TESNAASLIHFANCVLDVHSLKDRVVLAIHTGKIYSIVEVVNNSSAESPFDGNSD-KAPP 1061
+ + L+ C++ L ++V A H+GK + + + + SAE+ F P
Sbjct: 1210 EDLSKGKLMMADGCMV-AEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPL 1269
Query: 1062 DYITFADYFNKRYGIMLSYPQQPLLRLKQSHNPHNLL-VNFKDEGVTSDKLQSGSAFRKP 1121
+Y T+ADY+ ++YG+ L+ QQPL++ + NLL F+ G + L
Sbjct: 1270 EYNTYADYYKQKYGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGESETVLDK------- 1329
Query: 1122 QMHVHMPPELVLSMDVPKGVLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSL 1181
+V +PPEL + + +++ + LPS+M R ES++LA QL+ I+Y I +S
Sbjct: 1330 TYYVFLPPELCVVHPLSGSLIRGAQRLPSIMRRVESMLLAVQLKNLISYP-----IPTSK 1389
Query: 1182 ILEALTTLGSCESFSFERLELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATL 1241
ILEALT E+F +ER ELLGD+ LK+ VS LFLK+P+KHEGQL+ RQQ++ N L
Sbjct: 1390 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVL 1449
Query: 1242 HALGTKCKLQGYIRDSAFDPRRWVAPGHCTLRPVPCKCG----VDTAEVPLDDKFCS--E 1301
+ LQ YI+ F P RW APG + K G D + P+ ++ E
Sbjct: 1450 YQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSSFFDEEQKPVSEENSDVFE 1509
Query: 1302 DPKVVLGKCCD--KGHRWLVSKTIADCAEALIGAYYVDGGIIAALHVIKWLGIDADLDVA 1361
D ++ G+ +R L SKT+AD EALIG YYV+GG IAA H++KW+GI + D
Sbjct: 1510 DGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPD 1569
Query: 1362 LVVDAIASASLRSCNLKDTEIATLESKIGYEFAVKGLLLEAITHTSDQGLGVNYCYQRLE 1421
V + + ++ LK + LE + YEF KGLL+EAITH S GV+ CYQRLE
Sbjct: 1570 EVDGTLKNVNVPESVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVS-CYQRLE 1629
Query: 1422 FLGDSVLDLLITWYYYQKYSDIDPGELTDLRSASVNNETFAQVAVRRNLQQHLQHCSGLL 1481
F+GD+VLD LIT + + Y+ + PG LTDLR+A+VNNE FA+VAV+ L +L+H S L
Sbjct: 1630 FVGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSAL 1689
Query: 1482 ISQISEYVKYL-SESHDAGKSLHG---NKGPKVLGDMVESIAGAILIDTKLNLDEVWKIY 1541
QI E+VK + +ES G + G K PKVLGD+VESIAGAI +D+ + WK++
Sbjct: 1690 EKQIREFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVF 1749
Query: 1542 KPLLTPLVTPDKLELPPLRELIELCDSLGYFIKDKCTRKGEIFHAELRLQLQDVLLVGEG 1601
+PLL P+VTP+ L + P+REL E C ++ K +R G E+ + D + VG
Sbjct: 1750 QPLLQPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNTATVEVFI---DGVQVGVA 1809
Query: 1602 YERTRKASRGEAAQRILVQLETRGISYSRSGSKKRKQNPSCVEAAMVFSSSINCSTDACD 1633
+K ++ AA+ L L+ + I+ S+ IN + +A +
Sbjct: 1810 QNPQKKMAQKLAARNALAALKEKEIAESK-------------------EKHIN-NGNAGE 1869
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7030065.1 | 0.0e+00 | 100.00 | Endoribonuclease Dicer-like 3a, partial [Cucurbita argyrosperma subsp. argyrospe... | [more] |
XP_022946818.1 | 0.0e+00 | 99.27 | endoribonuclease Dicer homolog 3a isoform X1 [Cucurbita moschata] | [more] |
KAG6599127.1 | 0.0e+00 | 99.27 | Endoribonuclease Dicer-like 3a, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
XP_023547257.1 | 0.0e+00 | 98.60 | endoribonuclease Dicer homolog 3a isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
XP_022999593.1 | 0.0e+00 | 97.87 | endoribonuclease Dicer homolog 3 isoform X1 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Q5N870 | 0.0e+00 | 50.33 | Endoribonuclease Dicer homolog 3a OS=Oryza sativa subsp. japonica OX=39947 GN=DC... | [more] |
Q9LXW7 | 0.0e+00 | 50.21 | Endoribonuclease Dicer homolog 3 OS=Arabidopsis thaliana OX=3702 GN=DCL3 PE=1 SV... | [more] |
Q7XD96 | 0.0e+00 | 48.60 | Endoribonuclease Dicer homolog 3b OS=Oryza sativa subsp. japonica OX=39947 GN=DC... | [more] |
Q9SP32 | 2.4e-229 | 33.68 | Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV... | [more] |
Q8LMR2 | 6.8e-208 | 31.67 | Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1G4W0 | 0.0e+00 | 99.27 | endoribonuclease Dicer homolog 3a isoform X1 OS=Cucurbita moschata OX=3662 GN=LO... | [more] |
A0A6J1KK54 | 0.0e+00 | 97.87 | endoribonuclease Dicer homolog 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11... | [more] |
A0A6J1G500 | 0.0e+00 | 99.28 | endoribonuclease Dicer homolog 3a isoform X2 OS=Cucurbita moschata OX=3662 GN=LO... | [more] |
A0A6J1KHI7 | 0.0e+00 | 97.92 | endoribonuclease Dicer homolog 3a isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1... | [more] |
A0A5A7VG67 | 0.0e+00 | 88.62 | Endoribonuclease Dicer-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |