
Carg26889 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAACAAAAACTTTACCAAAAGGGCCTCAAAGTGTTTTTTTTTAATTGTTTTCTTTACTTTTCTTTTTCTGTTCTTGAGTGTGTACTAGAGGCCAGAATTGCTAATGCTTAATATGAATTTCTTGCGAGACATAGGCTTCCTTCAGTTACTGACTTCCACCTTTTATTGTCGATTTCATTCAATGATTCAAGTTGATTGTTGTCCCGGCTGTAAGAGTGATTAAGCAACTCCTCCTGCTATGTTTCTTCTTCATTACTATTATCATGCTTCCAAAATGACTCAACAATTGCATTATATCCGGTTCTTGGGATATTGATCTGAAGAATTTTACTAATTTGCTTGATCTGTTTTTATCCATCATACTATACCAGAGTTTTCTTTTTACTGTTACAGGTGGTAAAATGCCTCCATGTGGATGACGTTTATCACTTTCATAATATAATTGATATGCTTGTTGGATGCGGCTACAAGAAGGGAACGACATTGTTTGGTTTTGGTTATGATTTCCGGCAGAGTAATAGGTAGATCATTCTTCATCTCTTGTTTTAGTATCAAAATTTCATGAATGATTTAATTGCTAGTAGCCGAAAGTGTATGCATGAATCAACATTGATGTAGGAGCATTGGTTGTTGGTGACAGAATTGGCAAGGCTATGGATGGTCTTAAAGCGAAGCTGGAAACTGCTAGTAAAGCTTCTGGTGGTAGAAAAGTGAACATAATATCTCATTCTATGGGTGGGCTGCTACTTTCGTGTTTCATGTCACTCCATAATGATGTACGCACGTATTCTCTTGACTAGTTGAAACTTGCATCTATGAGCACGAACTTGTTTTATGGATTCGGCATGATGTGCTTATTGTTAATTGGCAGATTTTTTCCAAATACGTAAATAAGTGGATTGCTATAGCTTGCCCTTTCCAAGGTAATTCAAACCTATTGCTTATTTCCATTCGTCAATAGCTGTAATCTGAATCTAGTCCAATCATTGAAACTGTTCCTTATGTGAACAAATTCCTTTGATCAAGTTGTCCTTCTAACTTAGTTTCTCATTATTATTTATTTGATAGTAAACATTAGGAAAAATTGAATGTATGACCGATCTAACACAAAATAATAGCAAATATAGCACAAGCTCAAAATATTTGCCAATATGACACAACTGTAAGCCATATCAGTCTGGACTGAGGTCTATCACTGATAAACCTATCACTGACTGATATCGATCTATGATTGAGGTCTATCACTGATAAACCTCTCAATGATTGAGGTATGTCAATGATTGTTTGCATGCTTGTTTGCTATTACGTTATTACTAATATATTACTATCATAGAATATAAATGTAGTGGCTTCTTCTTGTCGCACTCTATATCTTTGTTTTTGTTCGTTTTGTCTTTTTCTTTCAATATCCTTTAGGCTAGTGAATATTGTGTTCCATGGAGGTGATGAGCTTCTGCATCCATAACATTAACTTTTGTATTTGGCTTGAAATCGACATGAGTTTGTTGAAGACATGAAGTACAAGTTGAAGATTCCCTTCTGTCTTTCATCTGTTTTGGATAATTCTCTAATTGATCCATTGCAAAATCCTGTACACTTATTTTTTCTTTGTAAGCAAGTCAAAGATGTTTCTGAGACTATCCGTTTGGCCAAGTATAGGATTCCCCAAGAAAGAAAATTCAAGTATCAGTTGGAAATTCGAATGTATAGTTCTTTGGGAAATGATTAGAGATTTTCTCTTAAAGATTGAGAAAAAGCACTCATCTTTCACTTTTCCGAATCATGTCAGGGAAAAATATTGTAGTCGGAGCTAGTTAAAGATAATCAACTTCATAAAAGAAAAATAAAATGCTTGTACATTTTGAGTGAGGAAAGAAAAAGAAGTGGAAATGAACTTCAATTTTGTCTCGGTGGTTTCTAGATTGCTAGCTCACAATTCTTGGAAGGACATTCATGATTGGTACATGATCATTAGAAGCATACAATCCTTGCTCAACCATTTCTTCCATCTAAATCCTTTTAGGGTGGACAAGGCGTTCCTCTGTTGCACGAAAAAAGTGGCAAGCTCTCGGTTGTAAATAGAACCATGGTAGATGAGGAACACTTGAACAACCTAGTGGTTCCTTCATATGGAGGATGA ATGAAACAAAAACTTTACCAAAAGGGCCTCAAAGTGGTAAAATGCCTCCATGTGGATGACGTTTATCACTTTCATAATATAATTGATATGCTTGTTGGATGCGGCTACAAGAAGGGAACGACATTGTTTGGTTTTGGTTATGATTTCCGGCAGAGAGCATTGGTTGTTGGTGACAGAATTGGCAAGGCTATGGATGGTCTTAAAGCGAAGCTGGAAACTGCTAGTAAAGCTTCTGGTGGTAGAAAAGGTGGACAAGGCGTTCCTCTGTTGCACGAAAAAAGTGGCAAGCTCTCGGTTGTAAATAGAACCATGGTAGATGAGGAACACTTGAACAACCTAGTGGTTCCTTCATATGGAGGATGA ATGAAACAAAAACTTTACCAAAAGGGCCTCAAAGTGGTAAAATGCCTCCATGTGGATGACGTTTATCACTTTCATAATATAATTGATATGCTTGTTGGATGCGGCTACAAGAAGGGAACGACATTGTTTGGTTTTGGTTATGATTTCCGGCAGAGAGCATTGGTTGTTGGTGACAGAATTGGCAAGGCTATGGATGGTCTTAAAGCGAAGCTGGAAACTGCTAGTAAAGCTTCTGGTGGTAGAAAAGGTGGACAAGGCGTTCCTCTGTTGCACGAAAAAAGTGGCAAGCTCTCGGTTGTAAATAGAACCATGGTAGATGAGGAACACTTGAACAACCTAGTGGTTCCTTCATATGGAGGATGA MKQKLYQKGLKVVKCLHVDDVYHFHNIIDMLVGCGYKKGTTLFGFGYDFRQRALVVGDRIGKAMDGLKAKLETASKASGGRKGGQGVPLLHEKSGKLSVVNRTMVDEEHLNNLVVPSYGG Homology
BLAST of Carg26889 vs. NCBI nr
Match: KAG7029922.1 (Phospholipase A(1) LCAT3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 246.5 bits (628), Expect = 1.2e-61 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of Carg26889 vs. NCBI nr
Match: XP_022973913.1 (phospholipase A(1) LCAT3 [Cucurbita maxima]) HSP 1 Score: 129.8 bits (325), Expect = 1.6e-26 Identity = 64/71 (90.14%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of Carg26889 vs. NCBI nr
Match: XP_023546771.1 (phospholipase A(1) LCAT3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 129.8 bits (325), Expect = 1.6e-26 Identity = 64/71 (90.14%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of Carg26889 vs. NCBI nr
Match: XP_022933151.1 (phospholipase A(1) LCAT3 [Cucurbita moschata]) HSP 1 Score: 129.8 bits (325), Expect = 1.6e-26 Identity = 64/71 (90.14%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of Carg26889 vs. NCBI nr
Match: KAG6598962.1 (Phospholipase A(1) LCAT3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 129.8 bits (325), Expect = 1.6e-26 Identity = 64/71 (90.14%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of Carg26889 vs. ExPASy Swiss-Prot
Match: Q93V61 (Phospholipase A(1) LCAT3 OS=Arabidopsis thaliana OX=3702 GN=LCAT3 PE=1 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.1e-18 Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 0
BLAST of Carg26889 vs. ExPASy Swiss-Prot
Match: Q71N54 (Lecithin-cholesterol acyltransferase-like 4 OS=Arabidopsis thaliana OX=3702 GN=LCAT4 PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 3.1e-09 Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of Carg26889 vs. ExPASy TrEMBL
Match: A0A6J1IEK6 (phospholipase A(1) LCAT3 OS=Cucurbita maxima OX=3661 GN=LOC111472543 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 7.6e-27 Identity = 64/71 (90.14%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of Carg26889 vs. ExPASy TrEMBL
Match: A0A6J1EYB8 (phospholipase A(1) LCAT3 OS=Cucurbita moschata OX=3662 GN=LOC111439951 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 7.6e-27 Identity = 64/71 (90.14%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of Carg26889 vs. ExPASy TrEMBL
Match: A0A0A0LHR5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G093800 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 1.4e-25 Identity = 61/71 (85.92%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of Carg26889 vs. ExPASy TrEMBL
Match: A0A5A7U650 (Phospholipase A(1) LCAT3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00130 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.2e-24 Identity = 60/71 (84.51%), Postives = 64/71 (90.14%), Query Frame = 0
BLAST of Carg26889 vs. ExPASy TrEMBL
Match: A0A1S3B3Q4 (phospholipase A(1) LCAT3 OS=Cucumis melo OX=3656 GN=LOC103485824 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.2e-24 Identity = 60/71 (84.51%), Postives = 64/71 (90.14%), Query Frame = 0
BLAST of Carg26889 vs. TAIR 10
Match: AT3G03310.1 (lecithin:cholesterol acyltransferase 3 ) HSP 1 Score: 93.2 bits (230), Expect = 1.5e-19 Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 0
BLAST of Carg26889 vs. TAIR 10
Match: AT4G19860.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 62.8 bits (151), Expect = 2.2e-10 Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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