Carg26885 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg26885
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr15: 4986916 .. 4987806 (-)
RNA-Seq ExpressionCarg26885
SyntenyCarg26885
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTTCCTGTGCTGAACAGGATTGCTGAATTAGGCTCAGATCTGGGCTTGCTTCGAATTTTCACTTCCTTTTTTCCATCCCCACATTTTTGGAAATGGGGTGCTGTTCTTATAACTTTGTTGGCCACTTTTAGTGGAATAATCAATCGGCTCAAGATTTTAATCATTGTCATTCGTCGGAGCAGTCGAACCACTCCGATTTGCGAGCCTCTCTCCCGATCTCTCCACGGCGGGGAGACCGCTGGTTTAGTTTCGGAGAATCTCAGATCTTCCCTGCTTTCAAGCTCGGAATCGGCAGATGAGAAAGAGGCGGACCGGGAACCGGACGACGGGTCGGATTTTCGAGTCAAAGGGACGGCTCGTTGTTCTCGTCTCCGGCGACGGTACGGCGGCGGAGGCGATGGAGATTCGGTTCCGTGGTCGTGGCCGTGTTTTGGGTCGGAACAGAGCGTAGTGAGGCAATGGGGTGATGTGAAATTGAAATGCGAGTTTGAGAAGTTAAGTGGGAGTGTGATTTCGTTGTACGATGAGAATGAAGAGGCGGAGATCTGCTCCATTTTCAGCGACGGAGCTCCGCTGCAAGTGGCGGCTTTATCGCCGGGGAGAATGGTGGTGGCCGCCGGAGAGAGCATATCGTCGAGCGTGTCACTTAAGCTTTGGGATACACGTTGCCGGAGCCGGACGTCAGTGCTGGCGGCGGAGTGGAATTCGCCGTCGGAAAAGGTCGTCGACGTCTATTTTGAGGATGTAGACAAAGTCTATCTTAGAGATAACGGAGGTGATAGAATAGTGGTCGGTGATGTTAGAAAAGTTAGGTCAGTGTCGGAGAATTCGTCGGCGGTCGACAACGGCGGCTGGTGGGAGTCAGAACATAGACGCCGTTTATAG

mRNA sequence

ATGGAAGTTCCTGTGCTGAACAGGATTGCTGAATTAGGCTCAGATCTGGGCTTGCTTCGAATTTTCACTTCCTTTTTTCCATCCCCACATTTTTGGAAATGGGGTGCTGTTCTTATAACTTTGTTGGCCACTTTTAGTGGAATAATCAATCGGCTCAAGATTTTAATCATTGTCATTCGTCGGAGCAGTCGAACCACTCCGATTTGCGAGCCTCTCTCCCGATCTCTCCACGGCGGGGAGACCGCTGGTTTAGTTTCGGAGAATCTCAGATCTTCCCTGCTTTCAAGCTCGGAATCGGCAGATGAGAAAGAGGCGGACCGGGAACCGGACGACGGGTCGGATTTTCGAGTCAAAGGGACGGCTCGTTGTTCTCGTCTCCGGCGACGGTACGGCGGCGGAGGCGATGGAGATTCGGTTCCGTGGTCGTGGCCGTGTTTTGGGTCGGAACAGAGCGTAGTGAGGCAATGGGGTGATGTGAAATTGAAATGCGAGTTTGAGAAGTTAAGTGGGAGTGTGATTTCGTTGTACGATGAGAATGAAGAGGCGGAGATCTGCTCCATTTTCAGCGACGGAGCTCCGCTGCAAGTGGCGGCTTTATCGCCGGGGAGAATGGTGGTGGCCGCCGGAGAGAGCATATCGTCGAGCGTGTCACTTAAGCTTTGGGATACACGTTGCCGGAGCCGGACGTCAGTGCTGGCGGCGGAGTGGAATTCGCCGTCGGAAAAGGTCGTCGACGTCTATTTTGAGGATGTAGACAAAGTCTATCTTAGAGATAACGGAGGTGATAGAATAGTGGTCGGTGATGTTAGAAAAGTTAGGTCAGTGTCGGAGAATTCGTCGGCGGTCGACAACGGCGGCTGGTGGGAGTCAGAACATAGACGCCGTTTATAG

Coding sequence (CDS)

ATGGAAGTTCCTGTGCTGAACAGGATTGCTGAATTAGGCTCAGATCTGGGCTTGCTTCGAATTTTCACTTCCTTTTTTCCATCCCCACATTTTTGGAAATGGGGTGCTGTTCTTATAACTTTGTTGGCCACTTTTAGTGGAATAATCAATCGGCTCAAGATTTTAATCATTGTCATTCGTCGGAGCAGTCGAACCACTCCGATTTGCGAGCCTCTCTCCCGATCTCTCCACGGCGGGGAGACCGCTGGTTTAGTTTCGGAGAATCTCAGATCTTCCCTGCTTTCAAGCTCGGAATCGGCAGATGAGAAAGAGGCGGACCGGGAACCGGACGACGGGTCGGATTTTCGAGTCAAAGGGACGGCTCGTTGTTCTCGTCTCCGGCGACGGTACGGCGGCGGAGGCGATGGAGATTCGGTTCCGTGGTCGTGGCCGTGTTTTGGGTCGGAACAGAGCGTAGTGAGGCAATGGGGTGATGTGAAATTGAAATGCGAGTTTGAGAAGTTAAGTGGGAGTGTGATTTCGTTGTACGATGAGAATGAAGAGGCGGAGATCTGCTCCATTTTCAGCGACGGAGCTCCGCTGCAAGTGGCGGCTTTATCGCCGGGGAGAATGGTGGTGGCCGCCGGAGAGAGCATATCGTCGAGCGTGTCACTTAAGCTTTGGGATACACGTTGCCGGAGCCGGACGTCAGTGCTGGCGGCGGAGTGGAATTCGCCGTCGGAAAAGGTCGTCGACGTCTATTTTGAGGATGTAGACAAAGTCTATCTTAGAGATAACGGAGGTGATAGAATAGTGGTCGGTGATGTTAGAAAAGTTAGGTCAGTGTCGGAGAATTCGTCGGCGGTCGACAACGGCGGCTGGTGGGAGTCAGAACATAGACGCCGTTTATAG

Protein sequence

MEVPVLNRIAELGSDLGLLRIFTSFFPSPHFWKWGAVLITLLATFSGIINRLKILIIVIRRSSRTTPICEPLSRSLHGGETAGLVSENLRSSLLSSSESADEKEADREPDDGSDFRVKGTARCSRLRRRYGGGGDGDSVPWSWPCFGSEQSVVRQWGDVKLKCEFEKLSGSVISLYDENEEAEICSIFSDGAPLQVAALSPGRMVVAAGESISSSVSLKLWDTRCRSRTSVLAAEWNSPSEKVVDVYFEDVDKVYLRDNGGDRIVVGDVRKVRSVSENSSAVDNGGWWESEHRRRL
Homology
BLAST of Carg26885 vs. NCBI nr
Match: KAG6579207.1 (hypothetical protein SDJN03_23655, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016721.1 hypothetical protein SDJN02_21831, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 588.6 bits (1516), Expect = 3.1e-164
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0

Query: 1   MEVPVLNRIAELGSDLGLLRIFTSFFPSPHFWKWGAVLITLLATFSGIINRLKILIIVIR 60
           MEVPVLNRIAELGSDLGLLRIFTSFFPSPHFWKWGAVLITLLATFSGIINRLKILIIVIR
Sbjct: 1   MEVPVLNRIAELGSDLGLLRIFTSFFPSPHFWKWGAVLITLLATFSGIINRLKILIIVIR 60

Query: 61  RSSRTTPICEPLSRSLHGGETAGLVSENLRSSLLSSSESADEKEADREPDDGSDFRVKGT 120
           RSSRTTPICEPLSRSLHGGETAGLVSENLRSSLLSSSESADEKEADREPDDGSDFRVKGT
Sbjct: 61  RSSRTTPICEPLSRSLHGGETAGLVSENLRSSLLSSSESADEKEADREPDDGSDFRVKGT 120

Query: 121 ARCSRLRRRYGGGGDGDSVPWSWPCFGSEQSVVRQWGDVKLKCEFEKLSGSVISLYDENE 180
           ARCSRLRRRYGGGGDGDSVPWSWPCFGSEQSVVRQWGDVKLKCEFEKLSGSVISLYDENE
Sbjct: 121 ARCSRLRRRYGGGGDGDSVPWSWPCFGSEQSVVRQWGDVKLKCEFEKLSGSVISLYDENE 180

Query: 181 EAEICSIFSDGAPLQVAALSPGRMVVAAGESISSSVSLKLWDTRCRSRTSVLAAEWNSPS 240
           EAEICSIFSDGAPLQVAALSPGRMVVAAGESISSSVSLKLWDTRCRSRTSVLAAEWNSPS
Sbjct: 181 EAEICSIFSDGAPLQVAALSPGRMVVAAGESISSSVSLKLWDTRCRSRTSVLAAEWNSPS 240

Query: 241 EKVVDVYFEDVDKVYLRDNGGDRIVVGDVRKVRSVSENSSAVDNGGWWESEHRRRL 297
           EKVVDVYFEDVDKVYLRDNGGDRIVVGDVRKVRSVSENSSAVDNGGWWESEHRRRL
Sbjct: 241 EKVVDVYFEDVDKVYLRDNGGDRIVVGDVRKVRSVSENSSAVDNGGWWESEHRRRL 296

BLAST of Carg26885 vs. NCBI nr
Match: XP_022939171.1 (uncharacterized protein LOC111445166 [Cucurbita moschata])

HSP 1 Score: 587.0 bits (1512), Expect = 8.9e-164
Identity = 295/296 (99.66%), Postives = 295/296 (99.66%), Query Frame = 0

Query: 1   MEVPVLNRIAELGSDLGLLRIFTSFFPSPHFWKWGAVLITLLATFSGIINRLKILIIVIR 60
           MEVPVLNRIAELGSDLGLLRIFTSFFPSPHFWKWGAVLITLLATFSGIINRLKILIIVIR
Sbjct: 1   MEVPVLNRIAELGSDLGLLRIFTSFFPSPHFWKWGAVLITLLATFSGIINRLKILIIVIR 60

Query: 61  RSSRTTPICEPLSRSLHGGETAGLVSENLRSSLLSSSESADEKEADREPDDGSDFRVKGT 120
           RSSRTTPICEPLSRSLHGGETAGLVSENLRSSLLSSSESADEKEADREPDDGSDFRVKGT
Sbjct: 61  RSSRTTPICEPLSRSLHGGETAGLVSENLRSSLLSSSESADEKEADREPDDGSDFRVKGT 120

Query: 121 ARCSRLRRRYGGGGDGDSVPWSWPCFGSEQSVVRQWGDVKLKCEFEKLSGSVISLYDENE 180
           ARCSRLRRRYGGGGDGDSVPWSWPCFGSEQSVVRQWGDVKLKCEFEKLSGSVISLYDENE
Sbjct: 121 ARCSRLRRRYGGGGDGDSVPWSWPCFGSEQSVVRQWGDVKLKCEFEKLSGSVISLYDENE 180

Query: 181 EAEICSIFSDGAPLQVAALSPGRMVVAAGESISSSVSLKLWDTRCRSRTSVLAAEWNSPS 240
           E EICSIFSDGAPLQVAALSPGRMVVAAGESISSSVSLKLWDTRCRSRTSVLAAEWNSPS
Sbjct: 181 ETEICSIFSDGAPLQVAALSPGRMVVAAGESISSSVSLKLWDTRCRSRTSVLAAEWNSPS 240

Query: 241 EKVVDVYFEDVDKVYLRDNGGDRIVVGDVRKVRSVSENSSAVDNGGWWESEHRRRL 297
           EKVVDVYFEDVDKVYLRDNGGDRIVVGDVRKVRSVSENSSAVDNGGWWESEHRRRL
Sbjct: 241 EKVVDVYFEDVDKVYLRDNGGDRIVVGDVRKVRSVSENSSAVDNGGWWESEHRRRL 296

BLAST of Carg26885 vs. NCBI nr
Match: XP_023550996.1 (uncharacterized protein LOC111808968 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 559.3 bits (1440), Expect = 2.0e-155
Identity = 282/296 (95.27%), Postives = 286/296 (96.62%), Query Frame = 0

Query: 1   MEVPVLNRIAELGSDLGLLRIFTSFFPSPHFWKWGAVLITLLATFSGIINRLKILIIVIR 60
           MEVPVLNRIAELGSDLGLLRIFTS  PSPHFWKWGAVLITLLATFSGIINRLKILIIVIR
Sbjct: 50  MEVPVLNRIAELGSDLGLLRIFTSISPSPHFWKWGAVLITLLATFSGIINRLKILIIVIR 109

Query: 61  RSSRTTPICEPLSRSLHGGETAGLVSENLRSSLLSSSESADEKEADREPDDGSDFRVKGT 120
           RSSRTTPI EPLSRSLHGGETAGLVSENLRSSLLSSSES DEKEADREPDDGSDFRVKGT
Sbjct: 110 RSSRTTPISEPLSRSLHGGETAGLVSENLRSSLLSSSESEDEKEADREPDDGSDFRVKGT 169

Query: 121 ARCSRLRRRYGGGGDGDSVPWSWPCFGSEQSVVRQWGDVKLKCEFEKLSGSVISLYDENE 180
           ARCSRLRRRYGGG DGDSVPWSWPCFGSE+SVVRQWGDVKLKCEFEKLSGSVISLYDENE
Sbjct: 170 ARCSRLRRRYGGGSDGDSVPWSWPCFGSERSVVRQWGDVKLKCEFEKLSGSVISLYDENE 229

Query: 181 EAEICSIFSDGAPLQVAALSPGRMVVAAGESISSSVSLKLWDTRCRSRTSVLAAEWNSPS 240
           EAEICSIFSDGAPLQVAALSPGRMVVAAGE +SSSVSLKLWDTRCRSRTSVLAAEWNSPS
Sbjct: 230 EAEICSIFSDGAPLQVAALSPGRMVVAAGERVSSSVSLKLWDTRCRSRTSVLAAEWNSPS 289

Query: 241 EKVVDVYFEDVDKVYLRDNGGDRIVVGDVRKVRSVSENSSAVDNGGWWESEHRRRL 297
            KVVDVY  DVDK+YLRDNGGDRIVVGDVRKVR VSENSSAVD+GGWWESEHRRRL
Sbjct: 290 GKVVDVYSNDVDKIYLRDNGGDRIVVGDVRKVRPVSENSSAVDSGGWWESEHRRRL 345

BLAST of Carg26885 vs. NCBI nr
Match: XP_022993318.1 (uncharacterized protein LOC111489361 [Cucurbita maxima])

HSP 1 Score: 552.4 bits (1422), Expect = 2.4e-153
Identity = 279/296 (94.26%), Postives = 285/296 (96.28%), Query Frame = 0

Query: 1   MEVPVLNRIAELGSDLGLLRIFTSFFPSPHFWKWGAVLITLLATFSGIINRLKILIIVIR 60
           MEVPVLNRIAELGSDLGLLRIFTSF PSPHFWKWGAVLITLLATFSGIINRLKILIIVIR
Sbjct: 1   MEVPVLNRIAELGSDLGLLRIFTSFSPSPHFWKWGAVLITLLATFSGIINRLKILIIVIR 60

Query: 61  RSSRTTPICEPLSRSLHGGETAGLVSENLRSSLLSSSESADEKEADREPDDGSDFRVKGT 120
           R SRTTPI EPLSRSLHGGETAGLVSENLRSSLLSS ESA+EKEADREPDDGSDFRVKGT
Sbjct: 61  RRSRTTPISEPLSRSLHGGETAGLVSENLRSSLLSSLESANEKEADREPDDGSDFRVKGT 120

Query: 121 ARCSRLRRRYGGGGDGDSVPWSWPCFGSEQSVVRQWGDVKLKCEFEKLSGSVISLYDENE 180
           ARCSRLRRRYGGG DGDSVPWSWPCFGSE+SVVRQW DVK KCEFEKLSGSVISLYDENE
Sbjct: 121 ARCSRLRRRYGGGSDGDSVPWSWPCFGSERSVVRQWVDVKFKCEFEKLSGSVISLYDENE 180

Query: 181 EAEICSIFSDGAPLQVAALSPGRMVVAAGESISSSVSLKLWDTRCRSRTSVLAAEWNSPS 240
           EAEICSI SDGAPLQVAALSPGRMVVAAGES+SS+VSLKLWDTRCRSRTSVLAAEWNSPS
Sbjct: 181 EAEICSILSDGAPLQVAALSPGRMVVAAGESVSSNVSLKLWDTRCRSRTSVLAAEWNSPS 240

Query: 241 EKVVDVYFEDVDKVYLRDNGGDRIVVGDVRKVRSVSENSSAVDNGGWWESEHRRRL 297
            KVVDVY +DVDK+YL DNGGDRIVVGDVRKVRSVSENSSAVDNGGWWESEHRRRL
Sbjct: 241 GKVVDVYSDDVDKIYLIDNGGDRIVVGDVRKVRSVSENSSAVDNGGWWESEHRRRL 296

BLAST of Carg26885 vs. NCBI nr
Match: XP_038885552.1 (uncharacterized protein LOC120075889 [Benincasa hispida])

HSP 1 Score: 402.9 bits (1034), Expect = 2.4e-108
Identity = 216/309 (69.90%), Postives = 241/309 (77.99%), Query Frame = 0

Query: 1   MEVPVLNRIAELGSDLG-------LLRIFTSFFPSPHFWKWGAVLITLLATFSGIINRLK 60
           MEVPVLNRI E+G+DL        L RIFTSF PS HFWKWGA++I LLATF+GIINR+K
Sbjct: 1   MEVPVLNRITEIGADLSSLPNPKFLSRIFTSFSPSQHFWKWGALIIALLATFTGIINRVK 60

Query: 61  ILIIVIRRSSRTTPICEPLSRSLHGGETAGLVSENLRSSLLSSSESADEKEADREPDDGS 120
           ILIIVIRR +RTT I EPL RSLHGGET GLVSENL+S LLSSSES DE E DR+ DD S
Sbjct: 61  ILIIVIRRRTRTTSISEPLYRSLHGGETGGLVSENLKSPLLSSSESEDENEGDRKQDDSS 120

Query: 121 DFRVKGTAR---------CSRLRRRY-GGGGDGDSVPWSWPCFGSEQSVVRQWGDVKLKC 180
           DFRVKG+ R         CSRLRRR+  GGGDGD   +SWPCFGS+ SVVRQWGDVKLKC
Sbjct: 121 DFRVKGSGRFSGEFDGRCCSRLRRRHCDGGGDGDL--FSWPCFGSDGSVVRQWGDVKLKC 180

Query: 181 EFEKLSGSVISLYDENEEAEICSIFSDGAPLQVAALSPGRMVVAAGESISSSVSLKLWDT 240
           EFE+LSGSVISLYDENEE EICSIF+ G PLQ AALSP +MVVAA E +S++VSLKLWD 
Sbjct: 181 EFEELSGSVISLYDENEETEICSIFNGGTPLQAAALSPRKMVVAASEGVSANVSLKLWDM 240

Query: 241 RCRSRTSVLAAEWNSPSEKVVDVYFEDVDKVYLRDNGGDRIVVGDVRKVRSVSENSSAVD 293
           R RSR  V+AAEW+SPS K+VDVY+EDV+ VYLRD G   I+VGDVRKV S S NS    
Sbjct: 241 RGRSRRPVVAAEWDSPSGKIVDVYYEDVENVYLRDKGAAGIMVGDVRKVSSASGNSPVGS 300

BLAST of Carg26885 vs. ExPASy TrEMBL
Match: A0A6J1FF64 (uncharacterized protein LOC111445166 OS=Cucurbita moschata OX=3662 GN=LOC111445166 PE=4 SV=1)

HSP 1 Score: 587.0 bits (1512), Expect = 4.3e-164
Identity = 295/296 (99.66%), Postives = 295/296 (99.66%), Query Frame = 0

Query: 1   MEVPVLNRIAELGSDLGLLRIFTSFFPSPHFWKWGAVLITLLATFSGIINRLKILIIVIR 60
           MEVPVLNRIAELGSDLGLLRIFTSFFPSPHFWKWGAVLITLLATFSGIINRLKILIIVIR
Sbjct: 1   MEVPVLNRIAELGSDLGLLRIFTSFFPSPHFWKWGAVLITLLATFSGIINRLKILIIVIR 60

Query: 61  RSSRTTPICEPLSRSLHGGETAGLVSENLRSSLLSSSESADEKEADREPDDGSDFRVKGT 120
           RSSRTTPICEPLSRSLHGGETAGLVSENLRSSLLSSSESADEKEADREPDDGSDFRVKGT
Sbjct: 61  RSSRTTPICEPLSRSLHGGETAGLVSENLRSSLLSSSESADEKEADREPDDGSDFRVKGT 120

Query: 121 ARCSRLRRRYGGGGDGDSVPWSWPCFGSEQSVVRQWGDVKLKCEFEKLSGSVISLYDENE 180
           ARCSRLRRRYGGGGDGDSVPWSWPCFGSEQSVVRQWGDVKLKCEFEKLSGSVISLYDENE
Sbjct: 121 ARCSRLRRRYGGGGDGDSVPWSWPCFGSEQSVVRQWGDVKLKCEFEKLSGSVISLYDENE 180

Query: 181 EAEICSIFSDGAPLQVAALSPGRMVVAAGESISSSVSLKLWDTRCRSRTSVLAAEWNSPS 240
           E EICSIFSDGAPLQVAALSPGRMVVAAGESISSSVSLKLWDTRCRSRTSVLAAEWNSPS
Sbjct: 181 ETEICSIFSDGAPLQVAALSPGRMVVAAGESISSSVSLKLWDTRCRSRTSVLAAEWNSPS 240

Query: 241 EKVVDVYFEDVDKVYLRDNGGDRIVVGDVRKVRSVSENSSAVDNGGWWESEHRRRL 297
           EKVVDVYFEDVDKVYLRDNGGDRIVVGDVRKVRSVSENSSAVDNGGWWESEHRRRL
Sbjct: 241 EKVVDVYFEDVDKVYLRDNGGDRIVVGDVRKVRSVSENSSAVDNGGWWESEHRRRL 296

BLAST of Carg26885 vs. ExPASy TrEMBL
Match: A0A6J1K1V4 (uncharacterized protein LOC111489361 OS=Cucurbita maxima OX=3661 GN=LOC111489361 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.2e-153
Identity = 279/296 (94.26%), Postives = 285/296 (96.28%), Query Frame = 0

Query: 1   MEVPVLNRIAELGSDLGLLRIFTSFFPSPHFWKWGAVLITLLATFSGIINRLKILIIVIR 60
           MEVPVLNRIAELGSDLGLLRIFTSF PSPHFWKWGAVLITLLATFSGIINRLKILIIVIR
Sbjct: 1   MEVPVLNRIAELGSDLGLLRIFTSFSPSPHFWKWGAVLITLLATFSGIINRLKILIIVIR 60

Query: 61  RSSRTTPICEPLSRSLHGGETAGLVSENLRSSLLSSSESADEKEADREPDDGSDFRVKGT 120
           R SRTTPI EPLSRSLHGGETAGLVSENLRSSLLSS ESA+EKEADREPDDGSDFRVKGT
Sbjct: 61  RRSRTTPISEPLSRSLHGGETAGLVSENLRSSLLSSLESANEKEADREPDDGSDFRVKGT 120

Query: 121 ARCSRLRRRYGGGGDGDSVPWSWPCFGSEQSVVRQWGDVKLKCEFEKLSGSVISLYDENE 180
           ARCSRLRRRYGGG DGDSVPWSWPCFGSE+SVVRQW DVK KCEFEKLSGSVISLYDENE
Sbjct: 121 ARCSRLRRRYGGGSDGDSVPWSWPCFGSERSVVRQWVDVKFKCEFEKLSGSVISLYDENE 180

Query: 181 EAEICSIFSDGAPLQVAALSPGRMVVAAGESISSSVSLKLWDTRCRSRTSVLAAEWNSPS 240
           EAEICSI SDGAPLQVAALSPGRMVVAAGES+SS+VSLKLWDTRCRSRTSVLAAEWNSPS
Sbjct: 181 EAEICSILSDGAPLQVAALSPGRMVVAAGESVSSNVSLKLWDTRCRSRTSVLAAEWNSPS 240

Query: 241 EKVVDVYFEDVDKVYLRDNGGDRIVVGDVRKVRSVSENSSAVDNGGWWESEHRRRL 297
            KVVDVY +DVDK+YL DNGGDRIVVGDVRKVRSVSENSSAVDNGGWWESEHRRRL
Sbjct: 241 GKVVDVYSDDVDKIYLIDNGGDRIVVGDVRKVRSVSENSSAVDNGGWWESEHRRRL 296

BLAST of Carg26885 vs. ExPASy TrEMBL
Match: A0A6J1CEG4 (uncharacterized protein LOC111010475 OS=Momordica charantia OX=3673 GN=LOC111010475 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 2.1e-94
Identity = 194/308 (62.99%), Postives = 231/308 (75.00%), Query Frame = 0

Query: 1   MEVPVLNRIAELGSDLG-------LLRIFTSFFPSPHFWKWGAVLITLLATFSGIINRLK 60
           MEVPVLNRI ELG+DL        L RI TSF PS HFWKWGAV+I LLATFSG+INR+K
Sbjct: 1   MEVPVLNRITELGADLSSLPNANFLSRILTSFSPSQHFWKWGAVVIALLATFSGLINRVK 60

Query: 61  ILIIVIRRSSRTTPICEPLSRSLHGGETAGLVSENLRSSLLSSSESADEKEADREPDDGS 120
           ILIIVIRR  RTTPI EPLSRSLHGGE  G VSENL S    SSES DE E    P+DGS
Sbjct: 61  ILIIVIRR-RRTTPIYEPLSRSLHGGENGGFVSENLGSPPFFSSESEDENELS-SPEDGS 120

Query: 121 DFRVKGTA----------RCSRLRRRYGGGGDGDSVPWSWPCFGSEQSVVRQWGDVKLKC 180
           DF VKG+           RCS LRRR+ G   GDS+  SW CFGSE+SVVRQWG+V+LKC
Sbjct: 121 DFGVKGSGRSSDDYSCGRRCSGLRRRHYG---GDSL--SWSCFGSERSVVRQWGEVQLKC 180

Query: 181 EFEKLSGSVISLYDENEEAEICSIFSDGAPLQVAALSPGRMVVAAGESISSSVSLKLWDT 240
           +F++LSGSVISLYDENEE EICSIFS GAP++ AA+SP  MVV+AG+S+  +VS+KLWDT
Sbjct: 181 KFDELSGSVISLYDENEEKEICSIFSGGAPVRAAAMSPAGMVVSAGQSVFGNVSVKLWDT 240

Query: 241 RCRSRTSVLAAEWNSPSEKVVDVYFEDVDKVYLRDNGGDRIVVGDVRKVRSVSENSSAVD 292
           R RS+T ++AAEWNSP+ K+VDVY+E+ +KVYLR++   ++ V DVRKV S  ENS+   
Sbjct: 241 RSRSQTPIVAAEWNSPAAKIVDVYYEESEKVYLRNDSDAKLTVADVRKVCSALENSNLGG 300

BLAST of Carg26885 vs. ExPASy TrEMBL
Match: A0A5A7T3F5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5066G00090 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 8.0e-94
Identity = 192/309 (62.14%), Postives = 231/309 (74.76%), Query Frame = 0

Query: 1   MEVPVLNRIAELGSDLG-------LLRIFTSFFPSPHFWKWGAVLITLLATFSGIINRLK 60
           MEVPVLNRI ELG+ LG       L RIFTSFFPS HFWKWGA++I LLATF+GIINR+K
Sbjct: 1   MEVPVLNRITELGAHLGSLPNPNFLSRIFTSFFPSQHFWKWGALIIALLATFTGIINRVK 60

Query: 61  ILIIVIRRSSRTTPICEPLSRSLHGGETAGLVSENLRSSLLSSSESADEKEADREPDDGS 120
           + II+ RR ++TT I EPL RSLH  ++ GLVS+NL+S  LSSSES DE E  RE ++ S
Sbjct: 61  VFIIICRRRTKTTSISEPLYRSLHCRDSGGLVSKNLKSPPLSSSESEDENERGRERNNDS 120

Query: 121 DFRVKGTAR--------C-SRLRRRY-GGGGDGDSVPWSWPCFGSEQSVVRQWGDVKLKC 180
           +FRVK ++R        C SRLRRR+  GG +GD  P  WPCFG ++SVVRQWGDV    
Sbjct: 121 NFRVKVSSRFSCELDGGCHSRLRRRHCNGGSNGDLFP--WPCFGLDRSVVRQWGDVISNS 180

Query: 181 EFEKLSGSVISLYDENEEAEICSIFSDGAPLQVAALSPGRMVVAAGESISSSVSLKLWDT 240
           EFE+LSGS+ISLYD+NEEAEICSIF++G  L+  A+SP RMVVAA E +S++VSLKLWDT
Sbjct: 181 EFEELSGSMISLYDDNEEAEICSIFNEGGSLKAVAVSPRRMVVAASEGVSANVSLKLWDT 240

Query: 241 RCRSRTSVLAAEWNSPSEKVVDVYFEDVDKVYLRDNGGDRIVVGDVRKVRSVSENSSAVD 293
           R RSRT V+A EW+SPS  +VDVY+EDV+ VYLRDNG   I+VGDVRK  S SE  +A D
Sbjct: 241 RGRSRTPVVAVEWDSPSRNIVDVYYEDVENVYLRDNGAAGIMVGDVRKASSGSEKLTAGD 300

BLAST of Carg26885 vs. ExPASy TrEMBL
Match: A0A1S3BCP7 (uncharacterized protein LOC103488596 OS=Cucumis melo OX=3656 GN=LOC103488596 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 8.0e-94
Identity = 192/309 (62.14%), Postives = 231/309 (74.76%), Query Frame = 0

Query: 1   MEVPVLNRIAELGSDLG-------LLRIFTSFFPSPHFWKWGAVLITLLATFSGIINRLK 60
           MEVPVLNRI ELG+ LG       L RIFTSFFPS HFWKWGA++I LLATF+GIINR+K
Sbjct: 1   MEVPVLNRITELGAHLGSLPNPNFLSRIFTSFFPSQHFWKWGALIIALLATFTGIINRVK 60

Query: 61  ILIIVIRRSSRTTPICEPLSRSLHGGETAGLVSENLRSSLLSSSESADEKEADREPDDGS 120
           + II+ RR ++TT I EPL RSLH  ++ GLVS+NL+S  LSSSES DE E  RE ++ S
Sbjct: 61  VFIIICRRRTKTTSISEPLYRSLHCRDSGGLVSKNLKSPPLSSSESEDENERGRERNNDS 120

Query: 121 DFRVKGTAR--------C-SRLRRRY-GGGGDGDSVPWSWPCFGSEQSVVRQWGDVKLKC 180
           +FRVK ++R        C SRLRRR+  GG +GD  P  WPCFG ++SVVRQWGDV    
Sbjct: 121 NFRVKVSSRFSCELDGGCHSRLRRRHCNGGSNGDLFP--WPCFGLDRSVVRQWGDVISNS 180

Query: 181 EFEKLSGSVISLYDENEEAEICSIFSDGAPLQVAALSPGRMVVAAGESISSSVSLKLWDT 240
           EFE+LSGS+ISLYD+NEEAEICSIF++G  L+  A+SP RMVVAA E +S++VSLKLWDT
Sbjct: 181 EFEELSGSMISLYDDNEEAEICSIFNEGGSLKAVAVSPRRMVVAASEGVSANVSLKLWDT 240

Query: 241 RCRSRTSVLAAEWNSPSEKVVDVYFEDVDKVYLRDNGGDRIVVGDVRKVRSVSENSSAVD 293
           R RSRT V+A EW+SPS  +VDVY+EDV+ VYLRDNG   I+VGDVRK  S SE  +A D
Sbjct: 241 RGRSRTPVVAVEWDSPSRNIVDVYYEDVENVYLRDNGAAGIMVGDVRKASSGSEKLTAGD 300

BLAST of Carg26885 vs. TAIR 10
Match: AT1G25400.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68440.1); Has 21 Blast hits to 21 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.0 bits (201), Expect = 8.7e-16
Identity = 85/296 (28.72%), Postives = 132/296 (44.59%), Query Frame = 0

Query: 1   MEVPVLNRIAELGSDLGLLRIFTSFFPSP--------------HFWKWGA-VLITLLATF 60
           MEVP++NRI +   D+G+  I    + S                FWKWGA +L+   A+F
Sbjct: 1   MEVPIINRIGDF--DMGINSINDPSYLSRALAVSGVGKLHQAYSFWKWGALLLLAFFASF 60

Query: 61  SGIINRLKILIIVIRRSSRTTPICEPLSRSLHGGETAGLVSENLRSSLLSSSESADEKEA 120
           + +  R+K L+  +R  + + P     S++L       L + +  S    SS+S+DE++ 
Sbjct: 61  TSLTTRIKTLVFRLRNVNVSLP-----SQTL-------LCNYDSDSDWSFSSDSSDEEK- 120

Query: 121 DREPDDGSDFRVKGTARCSRLRRRYGGGGDG--DSVPWSWPCFGSEQSVVRQWGDVKLKC 180
             E D+  D  V G +R  R    +     G   SVPW   C GS       +GD+    
Sbjct: 121 -DEDDNKEDDSVNGDSRVQRFGYYHDDDDKGISGSVPWLRRCSGS-------FGDL---- 180

Query: 181 EFEKLSGSVISLYD----ENEEAEICSIFSDGAPLQVAALSPGRMVVAAGESISSSVSLK 240
             +  S  V+ L+D      E + + S FS        +L    +++AA +  S  + + 
Sbjct: 181 -LDLGSSGVVKLWDNLDFNGEGSPVASFFSKCGSY---SLLSSAVLLAAEKKGSDGLEVS 240

Query: 241 LWDTRCRSRTSVLAAEWNSPSE---KVVDVYFEDVDKVYLRDNGGDRIVVGDVRKV 273
            WD R       L AEW  P     K++ V   DVDK+Y+ D+    I VGD+R V
Sbjct: 241 AWDARVGFGVPALLAEWKQPGRLLGKIIRVDVGDVDKIYVGDDVEGEITVGDMRMV 265

BLAST of Carg26885 vs. TAIR 10
Match: AT1G68440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G25400.2); Has 86 Blast hits to 86 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 27; Fungi - 11; Plants - 24; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). )

HSP 1 Score: 82.0 bits (201), Expect = 8.7e-16
Identity = 86/333 (25.83%), Postives = 140/333 (42.04%), Query Frame = 0

Query: 1   MEVPVLNRIAELGSDLGLLRIFTSFFPSPH--------------FWKWGAVLITLLATFS 60
           MEVPV+NRI +   ++G+  I    F S                FWKWGA++I  LA F+
Sbjct: 1   MEVPVINRIRDF--EVGINSINDPSFLSRSVAVSGIGKLHQAYGFWKWGALIIAFLAYFT 60

Query: 61  GIINRLKILIIVIRRSSRTTPICEPLSRSLHGGETAGLVSENLRSSLLSSSESADEKEAD 120
             +++L  L++ +R+      +  P     +  ++      +  S++ S  E  +E EAD
Sbjct: 61  NFVSKLNSLVVRLRKID--VSVSSPTLFDDYDSDS----DVSCSSTVSSDDEKDEEDEAD 120

Query: 121 REPDD----------GSDFRVKGT------------ARCSRLRRRYGGG-GDGDSVPWSW 180
            E +D             FRV+G+              C+ + RRY G  GD     +SW
Sbjct: 121 DEDEDVDSIFNRRRVNGGFRVRGSDYYDDDDDQGDNGNCTWMGRRYSGSFGD----LFSW 180

Query: 181 PCFG--SEQSVVRQWGDVKLKCEFEKLSGSVISLYDENEEAEICSIFSDGAPLQVAALSP 240
           P  G      VV+ W  + +  +  +   +V++ + +N         S  +P   AA   
Sbjct: 181 PDLGGIGSSGVVKLWDHLDIDGDDHE---NVVATFLKNYN-------STSSPFFWAAEKK 240

Query: 241 GRMVVAAGESISSSVSLKLWDTRCRSRTSVLAAEWNSPSE---KVVDVYFEDVDKVYLRD 292
           G            +V +K  D R   R   L AEW  P      ++ V    V+KVY+RD
Sbjct: 241 G----------VDAVKVKACDPRAGFRMPALLAEWRQPGRLLGNIIGVDTGGVEKVYVRD 300

BLAST of Carg26885 vs. TAIR 10
Match: AT1G25400.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68440.1). )

HSP 1 Score: 82.0 bits (201), Expect = 8.7e-16
Identity = 85/296 (28.72%), Postives = 132/296 (44.59%), Query Frame = 0

Query: 1   MEVPVLNRIAELGSDLGLLRIFTSFFPSP--------------HFWKWGA-VLITLLATF 60
           MEVP++NRI +   D+G+  I    + S                FWKWGA +L+   A+F
Sbjct: 1   MEVPIINRIGDF--DMGINSINDPSYLSRALAVSGVGKLHQAYSFWKWGALLLLAFFASF 60

Query: 61  SGIINRLKILIIVIRRSSRTTPICEPLSRSLHGGETAGLVSENLRSSLLSSSESADEKEA 120
           + +  R+K L+  +R  + + P     S++L       L + +  S    SS+S+DE++ 
Sbjct: 61  TSLTTRIKTLVFRLRNVNVSLP-----SQTL-------LCNYDSDSDWSFSSDSSDEEK- 120

Query: 121 DREPDDGSDFRVKGTARCSRLRRRYGGGGDG--DSVPWSWPCFGSEQSVVRQWGDVKLKC 180
             E D+  D  V G +R  R    +     G   SVPW   C GS       +GD+    
Sbjct: 121 -DEDDNKEDDSVNGDSRVQRFGYYHDDDDKGISGSVPWLRRCSGS-------FGDL---- 180

Query: 181 EFEKLSGSVISLYD----ENEEAEICSIFSDGAPLQVAALSPGRMVVAAGESISSSVSLK 240
             +  S  V+ L+D      E + + S FS        +L    +++AA +  S  + + 
Sbjct: 181 -LDLGSSGVVKLWDNLDFNGEGSPVASFFSKCGSY---SLLSSAVLLAAEKKGSDGLEVS 240

Query: 241 LWDTRCRSRTSVLAAEWNSPSE---KVVDVYFEDVDKVYLRDNGGDRIVVGDVRKV 273
            WD R       L AEW  P     K++ V   DVDK+Y+ D+    I VGD+R V
Sbjct: 241 AWDARVGFGVPALLAEWKQPGRLLGKIIRVDVGDVDKIYVGDDVEGEITVGDMRMV 265

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6579207.13.1e-164100.00hypothetical protein SDJN03_23655, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022939171.18.9e-16499.66uncharacterized protein LOC111445166 [Cucurbita moschata][more]
XP_023550996.12.0e-15595.27uncharacterized protein LOC111808968 [Cucurbita pepo subsp. pepo][more]
XP_022993318.12.4e-15394.26uncharacterized protein LOC111489361 [Cucurbita maxima][more]
XP_038885552.12.4e-10869.90uncharacterized protein LOC120075889 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1FF644.3e-16499.66uncharacterized protein LOC111445166 OS=Cucurbita moschata OX=3662 GN=LOC1114451... [more]
A0A6J1K1V41.2e-15394.26uncharacterized protein LOC111489361 OS=Cucurbita maxima OX=3661 GN=LOC111489361... [more]
A0A6J1CEG42.1e-9462.99uncharacterized protein LOC111010475 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A5A7T3F58.0e-9462.14Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BCP78.0e-9462.14uncharacterized protein LOC103488596 OS=Cucumis melo OX=3656 GN=LOC103488596 PE=... [more]
Match NameE-valueIdentityDescription
AT1G25400.18.7e-1628.72unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G68440.18.7e-1625.83unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G25400.28.7e-1628.72unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..116
NoneNo IPR availablePANTHERPTHR36715BNAANNG41370D PROTEINcoord: 1..291
NoneNo IPR availablePANTHERPTHR36715:SF1BNAANNG41370D PROTEINcoord: 1..291

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg26885-RACarg26885-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane