Carg26824 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTTGAAGTGGATTCTGAATTCCGCTTTCACTCAAGTTCTAGGGCTTACAGAGAAGCAACAACACAATCAGAACGAGGCGGGAGAAGGAATCAAGAACGTGGAGCAAGTGAAGGAGTCGGAAGATTGTTTTTATGGAGGTTTGAATTTTGAAAGTGGGTTTCAAATGCCTCTCCATTATCCCAGGTACACGAAGGCGGATTATGAGAAAATGGAAGACGGTAAATTGGATTTGCTTCTGAAACAATATGGACTCCGTTTTGAAGGTACCCTTGAGGAGAAAAGGGCATTTGCTATTGGCACGTTCTTGTGGCCTGACCAACTTTGAGTTTGCCCACCAGGTGTTTGATGAAAGTCCCCAATGAAAAAACTAGCTAACTTTTGATGTTTGCTGTTTGTATAGCTACTTTATGGATGTGATGTTAGATTAAGATGCAGAGATATTAGTAGCTGTGTCTTTGTTTGGCTGTATGTACTGATCTTGGTGGGATTTTAGTGCATCTTGTAAAAAACTAGTTACATATAATGGTATATTAATCACCCTTTTCTACTGAGTCCATGATTTTTCTTTGCAAAACAAGTATAATCTAGTAAAAGAAACAGGGAGAATTTGGTGTGTTCTTCAAGAAAACAAGGAAGAGAAGCTATGAATGTAGTGTCCATTCATAGTCTCTCACATAATTGTACAACATCTCTGATTGTTGTTATTATCTTGGCTGGGTTCCTCAGGGGCTGGATTACCAGGTGGCCCGCCCGGCCCTATCATTGGCCATGGGACAGGCTGCGGCTGTGGCTGTGGCAGCATGAACTGCCAAGGGTATGGCTGCGGCGGCAGCGGTGGTTGTTGGGGGTAAGATGTGTCAAACCAGCGAGATTGTTCTTGGGAATTCTGATAAGAATGATGAATGGGATCATCTCCATAAGGGTAATATCTTCTATCTCCAGCTTCACCGTCAAATCTTATACTTTTAACCTCTGCATGTTTGCCTGACTTTTCAATCACTTTCAGGAATGTTCTTGGATTCACTCTTCCACAGATTCTGACTGACCCATCATCTGAATCCATTGTGATGGTGTAAATACCTGGGAATCAAAAACAATGAAGAACAATGAAGAACAATGAAGAACATGAAGAACAATGAGGTAAAGAGAGAAACCATAGATGTTCTGTAGAATCTCTTGGACTTTTGCTGTGCATGCTTCACATTGAATACTTGCACTAAGAACACAACTCTGCAACAAAGTGAAAATGTTTTAGGTTTAGAAGAACATGAAAAGCAAAGAAAAGGGCGTCTGTTTATGGAGTGAA ATGGGGTTGAAGTGGATTCTGAATTCCGCTTTCACTCAAGTTCTAGGGCTTACAGAGAAGCAACAACACAATCAGAACGAGGCGGGAGAAGGAATCAAGAACGTGGAGCAAGTGAAGGAGTCGGAAGATTGTTTTTATGGAGGTTTGAATTTTGAAAGTGGGTTTCAAATGCCTCTCCATTATCCCAGGTACACGAAGGCGGATTATGAGAAAATGGAAGACGGTAAATTGGATTTGCTTCTGAAACAATATGGACTCCGTTTTGAAGGGGCTGGATTACCAGGTGGCCCGCCCGGCCCTATCATTGGCCATGGGACAGGCTGCGGCTGTGGCTGTGGCAGCATGAACTGCCAAGGGTATGGCTGCGGCGGCAGCGGTGGTTGTTGGGGGAATGTTCTTGGATTCACTCTTCCACAGATTCTGACTGACCCATCATCTGAATCCATTGTGATGGTGTAAATACCTGGGAATCAAAAACAATGAAGAACAATGAAGAACAATGAAGAACATGAAGAACAATGAGGTAAAGAGAGAAACCATAGATGTTCTGTAGAATCTCTTGGACTTTTGCTGTGCATGCTTCACATTGAATACTTGCACTAAGAACACAACTCTGCAACAAAGTGAAAATGTTTTAGGTTTAGAAGAACATGAAAAGCAAAGAAAAGGGCGTCTGTTTATGGAGTGAA ATGGGGTTGAAGTGGATTCTGAATTCCGCTTTCACTCAAGTTCTAGGGCTTACAGAGAAGCAACAACACAATCAGAACGAGGCGGGAGAAGGAATCAAGAACGTGGAGCAAGTGAAGGAGTCGGAAGATTGTTTTTATGGAGGTTTGAATTTTGAAAGTGGGTTTCAAATGCCTCTCCATTATCCCAGGTACACGAAGGCGGATTATGAGAAAATGGAAGACGGTAAATTGGATTTGCTTCTGAAACAATATGGACTCCGTTTTGAAGGGGCTGGATTACCAGGTGGCCCGCCCGGCCCTATCATTGGCCATGGGACAGGCTGCGGCTGTGGCTGTGGCAGCATGAACTGCCAAGGGTATGGCTGCGGCGGCAGCGGTGGTTGTTGGGGGAATGTTCTTGGATTCACTCTTCCACAGATTCTGACTGACCCATCATCTGAATCCATTGTGATGGTGTAA MGLKWILNSAFTQVLGLTEKQQHNQNEAGEGIKNVEQVKESEDCFYGGLNFESGFQMPLHYPRYTKADYEKMEDGKLDLLLKQYGLRFEGAGLPGGPPGPIIGHGTGCGCGCGSMNCQGYGCGGSGGCWGNVLGFTLPQILTDPSSESIVMV Homology
BLAST of Carg26824 vs. NCBI nr
Match: KAG7015590.1 (hypothetical protein SDJN02_23226, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 320.5 bits (820), Expect = 8.0e-84 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of Carg26824 vs. NCBI nr
Match: XP_022932392.1 (uncharacterized protein LOC111438758 [Cucurbita moschata]) HSP 1 Score: 188.3 bits (477), Expect = 4.7e-44 Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0
BLAST of Carg26824 vs. NCBI nr
Match: XP_022965232.1 (uncharacterized protein LOC111465146 [Cucurbita maxima]) HSP 1 Score: 182.6 bits (462), Expect = 2.6e-42 Identity = 86/90 (95.56%), Postives = 88/90 (97.78%), Query Frame = 0
BLAST of Carg26824 vs. NCBI nr
Match: XP_023553399.1 (uncharacterized protein LOC111810825 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 181.0 bits (458), Expect = 7.6e-42 Identity = 85/90 (94.44%), Postives = 89/90 (98.89%), Query Frame = 0
BLAST of Carg26824 vs. NCBI nr
Match: XP_038904207.1 (uncharacterized protein LOC120090553 [Benincasa hispida]) HSP 1 Score: 175.3 bits (443), Expect = 4.1e-40 Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0
BLAST of Carg26824 vs. ExPASy TrEMBL
Match: A0A6J1EWJ7 (uncharacterized protein LOC111438758 OS=Cucurbita moschata OX=3662 GN=LOC111438758 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 2.3e-44 Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0
BLAST of Carg26824 vs. ExPASy TrEMBL
Match: A0A6J1HJS9 (uncharacterized protein LOC111465146 OS=Cucurbita maxima OX=3661 GN=LOC111465146 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 1.3e-42 Identity = 86/90 (95.56%), Postives = 88/90 (97.78%), Query Frame = 0
BLAST of Carg26824 vs. ExPASy TrEMBL
Match: A0A5D3CPN0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00090 PE=4 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 1.0e-36 Identity = 81/92 (88.04%), Postives = 84/92 (91.30%), Query Frame = 0
BLAST of Carg26824 vs. ExPASy TrEMBL
Match: A0A0A0L4U1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G047750 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 2.3e-36 Identity = 80/92 (86.96%), Postives = 84/92 (91.30%), Query Frame = 0
BLAST of Carg26824 vs. ExPASy TrEMBL
Match: A0A1S3BM13 (uncharacterized protein LOC103491021 OS=Cucumis melo OX=3656 GN=LOC103491021 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 6.7e-36 Identity = 80/92 (86.96%), Postives = 83/92 (90.22%), Query Frame = 0
BLAST of Carg26824 vs. TAIR 10
Match: AT5G55620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 80.5 bits (197), Expect = 1.3e-15 Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 0
BLAST of Carg26824 vs. TAIR 10
Match: AT3G09950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 62.8 bits (151), Expect = 2.8e-10 Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 0
BLAST of Carg26824 vs. TAIR 10
Match: AT5G41761.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 4.0e-09 Identity = 31/65 (47.69%), Postives = 43/65 (66.15%), Query Frame = 0
BLAST of Carg26824 vs. TAIR 10
Match: AT3G55570.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.8 bits (120), Expect = 1.1e-06 Identity = 22/38 (57.89%), Postives = 27/38 (71.05%), Query Frame = 0
BLAST of Carg26824 vs. TAIR 10
Match: AT3G11405.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 47.0 bits (110), Expect = 1.6e-05 Identity = 21/39 (53.85%), Postives = 25/39 (64.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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