Carg26805 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg26805
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RAB6-interacting golgin
Location	Carg_Chr18: 11168107 .. 11170994 (+)
RNA-Seq Expression	Carg26805
Synteny	Carg26805

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTCGCGGATGCAATTGCTGGACCTCGACGTTTCATTTTGCCTGCGAAACTGAGCTTGCTTTCCCCCACGCAGAACCCAGTTTCCGAGATCTTGCCATCGCCATTTTTGAGCACTGAGTAGACGCTTTAAGGAACTGGGTTTTTCTTGTTTGGGTCAAATCCAGAATCCCTTTTACGCCATTTTCGTTTCTGATTCTGATTCCCGCAACAATTCTTTCATTTTTTTCTCTCGGAATAAATGGGTTCCGATCCCTTCCTTTTGCCTGAGATTGGTCCTGATGGCCTTGCCAGGGAAGCTCCTGTAATTGCCTACACTGAAAAGGTATTCGATCTGACTTTTGGGCTACAAGATTTTTCTTAATTTAATTCTTATTTTATCTTTTCAGTTTTGCTTATTTGTTATCGGATTATGTTGCAGATAATCGAGGAAGGGCGTCTTCAATTGAGAAAGTACGAATTTCTTTTATTACCTTTACGGATCTGGTTTTTCTCACATTATAACTCTCTTTATGTGTTTATTTGCTTATGATTGGTAAATTAGAAGTATTACTTGTTATTCTATCTTCCCTGTTCACGGAAATTTTAGTGTGGGGCGTTATCCTAGTTACATTCTTACATGGTAACAGATATGGATGCAGTACGTCTTTGTTTATAGTTTATAATGCACAAGTGTGCAATTAATGGTACTTGACTTGAGGAAGTCTTGAAGGAACCATCTTGGCTCAGTTAATCTTTTTCTTTTCTTGGTGTATTACGAGTTTGGGTTGTAACCTAATGTCAATACCACTGGTTGTACCAAAAGGTCACAACCATCGTTGCTCTGATACCACTTGTTGTAACCTAATGTCAAAACCCTCGATGCTCTGATACCAATTGTTATGGAGTGGAACGAATGTCTAACCTCTAAACTATGTTCAGGTTGAAGGTTAATTAAGTTAAGATCAATGACATAGTGAATTGTAACAGCTAACAGATATTGTCTACTAAGCCCCCTCATCTCTTTCCAACGTAGTGAATTCCTTATAAGGGTGTGGAAACCTCTCTTTAGTGGGTGTGTATTAAAACCTTGAGGGGAAGCTCAGAAGGGAAAGCCCAAAGAGAACAATATCTACTAACCGTGGGTTTGGATTCTTACAAATGGTATCAGAGTCAAACATCGGGTGGTGTGTTAGCGAGGATGTTGGTTCCTAAGGGAGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAACATTCCTTAGGGCGTGGAAGCCTCTCTCTAGTAGACGCGTTTTAAACCTTGAGGAAAAGTCTAAAGATGACAATATCTACTAGCGGTGGGCTTGGGCTGTTACATGAACGTATGGAGATTAAGTGAATGATCTGAACATGGGGAATTTTTATGTTTGGAAAAGATTTTTCCCATCATTCTTAAGTTTGAAGTTGGTATAGACGAATGAAGGATAGTGTTGAGGCAAAGTTGAGGAGGGTGTTGATTGGGGTAAATTGAGATATCCGAAGCATTGTAGGATAATGTGATCATTTACCATTGATTAACTCATAATGATATCTCAGACAGAGTTGATATTAGTTCCAACATCTCGTGTTGCTGATGGTTGTGATATTTGACGCCAATACTTAAAGTTGACAAGAACATAGAATTAGACTCTTCATCAAGTTCTTTGTTTTTCTTTTCTTACCCATATCGTTAAATGGGAAATTTTGTTTATTGTTCGGGTCGTAATTTCATTCAGATACATTGATGAGAATTATTCTAAGATTCGAGATGTTGAACGAGAGTTGGCAGAGCTTACAATGGAGATGAAACTCACATCTGGTCCAAAAAAAGCAGGTTGAGCTTACTGTCAGTTGTTTTATATTCATTATTGATTTTCATTAACTGGCTTTGGCTGACCACCAAGCGTGGTTACATATCTCTAGCACTCGAACTTCTGCGGAAGAAAATAGAGATGTCAACGGAAAGAATACATGCAGCCAAGTTGAAGGAAGAACAAGCAAAGAAGGTTTGCCCCTTGTCAATTTTTACACGATTTTAGTGTAATACATACATCTAGGCTGAGATCCCACACCGTTGGAGAGGAGAACGAAAGGGAAAGTCCCTAGCAGACGCGTTTTAAAACCTTGAGGGAAAGTCCAAAGAGGACAATATCGGCTAGTGGTGGGCTAGGGTCGTTACATGGACTTTCTTCTTTAGATCGTTAATTGGAATTTAAGGAATTGAGTCTGATGTTCTCCCTTCAGGCTTGGGAAGCAGCGTCGAAGGTCGTGCAGGACGAGGAAGCAATTAAGCAAAAGCTGTGTGATGACTTGAATCATCTGGTACATGACTTTGCATTATATTTGGTTATGTTAAAACTAACAAACACAACTTGTTGATAGTACTGTCGTTTATTCTTAATAGGTTCAAGAAAGCAATAATTCGCAGTTGACGAGGCTCGAAGAACTAAAACGAAGAATGGAAGCTTTGAATTCAAACCGAGTATCGACCTCTGTTTCTCAAGTAATGATTTCTGCTTGTTAGCCATTAACATAGCCCTGTTGAGAGAATTGATGTAAAACATATGGTTTTCAGGTTACACAAGAAGGCCAAACAATGGGGAATGCTCAGAACAGCAGAGTTGCAGATTCTTCTGGAGTTGCTACATCAACAGAAATAACAGGTGCAAAAGCAAATGAAAGTGCACGTATTCAAGCAGTCAGTGGTGATGCTCCGGTGGTGAATGGCCAAAATCAAAAGCCATCTTCTGAGACAGAAGTAAGAGGGAAAAGGAAAAACCAGTTTCATGGAAGAGGGAAGGGAATTGGAGCAGTGCCTAAAGGAAGAAGCTCTGCAGACTCTGGGTGGACTGGCTCTGGGTTTGATGTGGATGGTAGGGTATAA

mRNA sequence

AACTCGCGGATGCAATTGCTGGACCTCGACGTTTCATTTTGCCTGCGAAACTGAGCTTGCTTTCCCCCACGCAGAACCCAGTTTCCGAGATCTTGCCATCGCCATTTTTGAGCACTGAGTAGACGCTTTAAGGAACTGGGTTTTTCTTGTTTGGGTCAAATCCAGAATCCCTTTTACGCCATTTTCGTTTCTGATTCTGATTCCCGCAACAATTCTTTCATTTTTTTCTCTCGGAATAAATGGGTTCCGATCCCTTCCTTTTGCCTGAGATTGGTCCTGATGGCCTTGCCAGGGAAGCTCCTGTAATTGCCTACACTGAAAAGATAATCGAGGAAGGGCGTCTTCAATTGAGAAAATACATTGATGAGAATTATTCTAAGATTCGAGATGTTGAACGAGAGTTGGCAGAGCTTACAATGGAGATGAAACTCACATCTGGTCCAAAAAAAGCAGCACTCGAACTTCTGCGGAAGAAAATAGAGATGTCAACGGAAAGAATACATGCAGCCAAGTTGAAGGAAGAACAAGCAAAGAAGGCTTGGGAAGCAGCGTCGAAGGTCGTGCAGGACGAGGAAGCAATTAAGCAAAAGCTGTGTGATGACTTGAATCATCTGGTTCAAGAAAGCAATAATTCGCAGTTGACGAGGCTCGAAGAACTAAAACGAAGAATGGAAGCTTTGAATTCAAACCGAGTATCGACCTCTGTTTCTCAAGTTACACAAGAAGGCCAAACAATGGGGAATGCTCAGAACAGCAGAGTTGCAGATTCTTCTGGAGTTGCTACATCAACAGAAATAACAGGTGCAAAAGCAAATGAAAGTGCACGTATTCAAGCAGTCAGTGGTGATGCTCCGGTGGTGAATGGCCAAAATCAAAAGCCATCTTCTGAGACAGAAGTAAGAGGGAAAAGGAAAAACCAGTTTCATGGAAGAGGGAAGGGAATTGGAGCAGTGCCTAAAGGAAGAAGCTCTGCAGACTCTGGGTGGACTGGCTCTGGGTTTGATGTGGATGGTAGGGTATAA

Coding sequence (CDS)

ATGGGTTCCGATCCCTTCCTTTTGCCTGAGATTGGTCCTGATGGCCTTGCCAGGGAAGCTCCTGTAATTGCCTACACTGAAAAGATAATCGAGGAAGGGCGTCTTCAATTGAGAAAATACATTGATGAGAATTATTCTAAGATTCGAGATGTTGAACGAGAGTTGGCAGAGCTTACAATGGAGATGAAACTCACATCTGGTCCAAAAAAAGCAGCACTCGAACTTCTGCGGAAGAAAATAGAGATGTCAACGGAAAGAATACATGCAGCCAAGTTGAAGGAAGAACAAGCAAAGAAGGCTTGGGAAGCAGCGTCGAAGGTCGTGCAGGACGAGGAAGCAATTAAGCAAAAGCTGTGTGATGACTTGAATCATCTGGTTCAAGAAAGCAATAATTCGCAGTTGACGAGGCTCGAAGAACTAAAACGAAGAATGGAAGCTTTGAATTCAAACCGAGTATCGACCTCTGTTTCTCAAGTTACACAAGAAGGCCAAACAATGGGGAATGCTCAGAACAGCAGAGTTGCAGATTCTTCTGGAGTTGCTACATCAACAGAAATAACAGGTGCAAAAGCAAATGAAAGTGCACGTATTCAAGCAGTCAGTGGTGATGCTCCGGTGGTGAATGGCCAAAATCAAAAGCCATCTTCTGAGACAGAAGTAAGAGGGAAAAGGAAAAACCAGTTTCATGGAAGAGGGAAGGGAATTGGAGCAGTGCCTAAAGGAAGAAGCTCTGCAGACTCTGGGTGGACTGGCTCTGGGTTTGATGTGGATGGTAGGGTATAA

Protein sequence

MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTMEMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGVATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKRKNQFHGRGKGIGAVPKGRSSADSGWTGSGFDVDGRV

Homology

[Close]

BLAST of Carg26805 vs. NCBI nr
Match: KAG7013196.1 (hypothetical protein SDJN02_25953 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 480.3 bits (1235), Expect = 1.0e-131
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM
Sbjct: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV
Sbjct: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180

Query: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKRKNQFHGRGKGIGAVPK 240
           ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKRKNQFHGRGKGIGAVPK
Sbjct: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKRKNQFHGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGRV 261
           GRSSADSGWTGSGFDVDGRV
Sbjct: 241 GRSSADSGWTGSGFDVDGRV 260

[Close]

BLAST of Carg26805 vs. NCBI nr
Match: KAG6574142.1 (hypothetical protein SDJN03_28029, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 479.2 bits (1232), Expect = 2.3e-131
Identity = 259/260 (99.62%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM
Sbjct: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV
Sbjct: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180

Query: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKRKNQFHGRGKGIGAVPK 240
           ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGK+KNQFHGRGKGIGAVPK
Sbjct: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGRV 261
           GRSSADSGWTGSGFDVDGRV
Sbjct: 241 GRSSADSGWTGSGFDVDGRV 260

[Close]

BLAST of Carg26805 vs. NCBI nr
Match: XP_022945967.1 (uncharacterized protein LOC111450054 [Cucurbita moschata])

HSP 1 Score: 477.2 bits (1227), Expect = 8.7e-131
Identity = 258/260 (99.23%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM
Sbjct: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV
Sbjct: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180

Query: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKRKNQFHGRGKGIGAVPK 240
           ATSTE TGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGK+KNQFHGRGKGIGAVPK
Sbjct: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGRV 261
           GRSSADSGWTGSGFDVDGRV
Sbjct: 241 GRSSADSGWTGSGFDVDGRV 260

[Close]

BLAST of Carg26805 vs. NCBI nr
Match: XP_022968531.1 (uncharacterized protein LOC111467736 [Cucurbita maxima])

HSP 1 Score: 472.2 bits (1214), Expect = 2.8e-129
Identity = 256/260 (98.46%), Postives = 258/260 (99.23%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM
Sbjct: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTM +AQNSRVADSSGV
Sbjct: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMRSAQNSRVADSSGV 180

Query: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKRKNQFHGRGKGIGAVPK 240
           ATSTE TGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGK+KNQFHGRGKGIGAVPK
Sbjct: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGRV 261
           GRSSADSGWTGSGFDVDGRV
Sbjct: 241 GRSSADSGWTGSGFDVDGRV 260

[Close]

BLAST of Carg26805 vs. NCBI nr
Match: XP_023541472.1 (uncharacterized protein LOC111801645 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 469.5 bits (1207), Expect = 1.8e-128
Identity = 255/260 (98.08%), Postives = 257/260 (98.85%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM
Sbjct: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALE LRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD
Sbjct: 61  EMKLTSGPKKAALEHLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMG+AQNSRVADSSGV
Sbjct: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGSAQNSRVADSSGV 180

Query: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKRKNQFHGRGKGIGAVPK 240
           ATSTE TGAKANESARIQAVSGDAPVVNGQNQK SSETEVRGK+KNQFHGRGKGIGAVPK
Sbjct: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKASSETEVRGKKKNQFHGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGRV 261
           GRSSADSGWTGSGFDVDGRV
Sbjct: 241 GRSSADSGWTGSGFDVDGRV 260

[Close]

BLAST of Carg26805 vs. ExPASy TrEMBL
Match: A0A6J1G2D4 (uncharacterized protein LOC111450054 OS=Cucurbita moschata OX=3662 GN=LOC111450054 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 4.2e-131
Identity = 258/260 (99.23%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM
Sbjct: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV
Sbjct: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180

Query: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKRKNQFHGRGKGIGAVPK 240
           ATSTE TGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGK+KNQFHGRGKGIGAVPK
Sbjct: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGRV 261
           GRSSADSGWTGSGFDVDGRV
Sbjct: 241 GRSSADSGWTGSGFDVDGRV 260

[Close]

BLAST of Carg26805 vs. ExPASy TrEMBL
Match: A0A6J1HV58 (uncharacterized protein LOC111467736 OS=Cucurbita maxima OX=3661 GN=LOC111467736 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.4e-129
Identity = 256/260 (98.46%), Postives = 258/260 (99.23%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM
Sbjct: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTM +AQNSRVADSSGV
Sbjct: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMRSAQNSRVADSSGV 180

Query: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKRKNQFHGRGKGIGAVPK 240
           ATSTE TGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGK+KNQFHGRGKGIGAVPK
Sbjct: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGRV 261
           GRSSADSGWTGSGFDVDGRV
Sbjct: 241 GRSSADSGWTGSGFDVDGRV 260

[Close]

BLAST of Carg26805 vs. ExPASy TrEMBL
Match: A0A5D3DFA0 (RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00140 PE=3 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 3.0e-105
Identity = 220/259 (84.94%), Postives = 231/259 (89.19%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDP LLPEIGPDGLAREAPVIAYTEKIIEEG LQLRK IDEN SKIRDVERELA LTM
Sbjct: 1   MGSDPSLLPEIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK WEAASKVVQDEEA KQKLC+
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQDEEATKQKLCE 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQES+N QLTRLEELKRRMEALNS+RVSTSVS    + + MG AQNSRV+DSS V
Sbjct: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVS---HDVKAMGGAQNSRVSDSSAV 180

Query: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKRKNQFHGRGKGIGAVPK 240
           AT+TE TGAK NE+   Q  S  APV+NGQNQKP SETE RGK+KNQFHGRGKGIGAVPK
Sbjct: 181 ATTTE-TGAKTNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGR 260
           GRSSADSGWTGSGFDVDGR
Sbjct: 241 GRSSADSGWTGSGFDVDGR 255

[Close]

BLAST of Carg26805 vs. ExPASy TrEMBL
Match: A0A6J1CI49 (uncharacterized protein LOC111011714 OS=Momordica charantia OX=3673 GN=LOC111011714 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.7e-100
Identity = 216/264 (81.82%), Postives = 232/264 (87.88%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           M S+P LLPEIGPDGLA E+PVIAYTEKIIEE +LQLRKYI+ENYSKIRDVERELA LTM
Sbjct: 1   MASNPSLLPEIGPDGLAMESPVIAYTEKIIEEEQLQLRKYIEENYSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEM+TERI AAKLKEEQAK+AWEAASKVVQDEE IKQKLC+
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMATERIRAAKLKEEQAKQAWEAASKVVQDEEQIKQKLCE 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQES+NSQLTRLEELKRRMEALN  RVSTSVS    +G+T+G AQNSRV+DSSG 
Sbjct: 121 DLNHLVQESSNSQLTRLEELKRRMEALNPGRVSTSVS---YDGKTVGGAQNSRVSDSSGG 180

Query: 181 ATSTEITG--AKANESARIQAVS--GDAPVVNGQNQKPSSETEVRGKRKNQFHGRGKGIG 240
            TSTE TG  A+ANESA  Q  +  G  PV+NGQNQKP SE E RGK+KNQ HGRGKGIG
Sbjct: 181 PTSTE-TGVRARANESAPNQGTTSGGAPPVMNGQNQKPPSEGEGRGKKKNQLHGRGKGIG 240

Query: 241 AVPKGRSSADSGWTGSGFDVDGRV 261
           AVPKGRSS DSGWTGSGFDVDGRV
Sbjct: 241 AVPKGRSSTDSGWTGSGFDVDGRV 260

[Close]

BLAST of Carg26805 vs. ExPASy TrEMBL
Match: A0A0A0L8J1 (RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_3G179140 PE=3 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 5.6e-91
Identity = 202/259 (77.99%), Postives = 213/259 (82.24%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDP LLP                   IIEEG LQLRK IDEN SKIRDVERELA LTM
Sbjct: 1   MGSDPSLLP-------------------IIEEGSLQLRKCIDENLSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK WEAASKVVQ+EEA KQKLC+
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQES+N QLTRLEELKRRMEALNS+RVSTSVS    +  TMG AQNSRV+DSSGV
Sbjct: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVS---HDVMTMGGAQNSRVSDSSGV 180

Query: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKRKNQFHGRGKGIGAVPK 240
           AT+TE TGAK NE+   Q  S  APV+NGQNQKP SETE RGK+KNQFHGRGKGIGAVPK
Sbjct: 181 ATTTE-TGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPK 236

Query: 241 GRSSADSGWTGSGFDVDGR 260
           GRSSADSGWTGSGFDVDGR
Sbjct: 241 GRSSADSGWTGSGFDVDGR 236

[Close]

BLAST of Carg26805 vs. TAIR 10
Match: AT5G51840.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 256.9 bits (655), Expect = 1.7e-68
Identity = 158/260 (60.77%), Postives = 191/260 (73.46%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           M SDP L  EIG DGLAREAPVIAYTEKIIEE ++QLRKYI+ENY+KIRDVERE   L+M
Sbjct: 2   MASDPKLKAEIGADGLAREAPVIAYTEKIIEEEQVQLRKYIEENYTKIRDVEREFGNLSM 61

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           E+KLT+GPKKAA+E LRKKIE+STERIHAAKLKEE+A+KA+EAASKVV+DEEA KQ LC+
Sbjct: 62  ELKLTAGPKKAAMEHLRKKIEVSTERIHAAKLKEEEARKAFEAASKVVKDEEATKQSLCE 121

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLN LVQ+S+N+Q  RLEELKRR+EALN NR STS+ QV QE +T        V DS+  
Sbjct: 122 DLNSLVQQSSNTQYARLEELKRRLEALNPNRSSTSIQQV-QEPET------KSVVDSAPA 181

Query: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKP-SSETEVRGKRKNQFHGRGKGIGAVP 240
           A + +    K   +       G+        Q+P ++E E + K+K Q  GRG+GIG + 
Sbjct: 182 ANANQTHPGKPENN------HGNEEGGKEHGQRPATAEGESKAKKKPQNQGRGRGIGIMN 241

Query: 241 KGRSSADSGWTGSGFDVDGR 260
           KGR     GWTG+GFDVDGR
Sbjct: 242 KGR----GGWTGAGFDVDGR 244

The following BLAST results are available for this feature:

BLAST of Carg26805 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013196.1	1.0e-131	100.00	hypothetical protein SDJN02_25953 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6574142.1	2.3e-131	99.62	hypothetical protein SDJN03_28029, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022945967.1	8.7e-131	99.23	uncharacterized protein LOC111450054 [Cucurbita moschata]	[more]
XP_022968531.1	2.8e-129	98.46	uncharacterized protein LOC111467736 [Cucurbita maxima]	[more]
XP_023541472.1	1.8e-128	98.08	uncharacterized protein LOC111801645 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg26805 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg26805 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2D4	4.2e-131	99.23	uncharacterized protein LOC111450054 OS=Cucurbita moschata OX=3662 GN=LOC1114500...	[more]
A0A6J1HV58	1.4e-129	98.46	uncharacterized protein LOC111467736 OS=Cucurbita maxima OX=3661 GN=LOC111467736...	[more]
A0A5D3DFA0	3.0e-105	84.94	RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1CI49	1.7e-100	81.82	uncharacterized protein LOC111011714 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A0A0L8J1	5.6e-91	77.99	RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_3G179140 PE=3 SV=1	[more]

BLAST of Carg26805 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G51840.1	1.7e-68	60.77	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 130..157
None	No IPR available	COILS	Coil	Coil	coord: 41..61
None	No IPR available	COILS	Coil	Coil	coord: 73..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..260
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..177
None	No IPR available	PANTHER	PTHR35315	ACI13	coord: 1..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26805-RA	Carg26805-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus