Carg26648 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg26648
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	small RNA degrading nuclease 5-like
Location	Carg_Chr09: 6099569 .. 6106675 (+)
RNA-Seq Expression	Carg26648
Synteny	Carg26648

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTTTCAAGCACAAAGAGTAGGGCGAATCAATGGGGGGTTTTGTTTGATTCGCAGCCTTCCATGGGCGCAGGGCTTTCGAGTAAAAGACTTGCAGAAACTTCTTTCGCCTCTCTGTTCACTCTCTGCCCAGAACACAACACTATGCCATCTTCCAGTGTTTCAGCTTTGGATGCCAAAGAAGAGGGCAAGTCGAACGTGGGCAATACGGAGGAGGAGGAGGAGGAGGAGAAGCCCAGCTTCTTCGATATCTATGGAACCGATGTATGTATTCTCTTATTCATCATTCAGCTGCCCATTTGCCTTTTCAAGCCCTTGATTCTTATTGTCGTTAAATCAATAAAAGGGGTGTTAGTATTTCCTTGAACTGCATAGGTTTTTTATCCTCCAAGAACCACGTAGTGAATTCTGCTTACTTTGATTCCTCTTGTAGGCTAAAGCTGAGGTTCTTTTCAAAACTCCAGAATCTAATTCAACTTTAAGTCTGCAAGTGAGTTTGCTTAGTTGGCAAGTTTCTTATAATGTTGATATCTTAAGTGATTATTAGATTTTTCGTTGTTTTTTTGTTTTTTTGTAGGATGTTCAAGGGCTTGTAACTTGGGTGCTTGCGGAAGGTTTCATGCCATCGTGGGTTTTTATCAAGGTCAATACCTTTTCAACTTTTCCTTGATATCTCTATCTTGAAATTTTGTGTAAGCAAAGGAGACCTGACTATGAACGTAATCTAAGGTCAATACCTTATAAATGGTGTTTTATTCTCCTCCCCAACCAACGTGGGACTCACTCCCAATAATCCTCAACAATCTTCCCCTCGAACGAAGTACACTATAAGCCTCCCCTGAGTCTTATGGAGCTCTCGAATAGCCTCCCCTTAATCGAGGCTCGACTCCTTTCTCTAGAGCCCTCAAATAAAGTACACCCTTTGTTCGACACTTTAGTCACTTTTGACTACACTTTCAAGACTCGCAATTCTTTGTTCGATATTTGAGGATTCTATTGATATGGTTAAGTTTAGGGCATGGCTTTGATATCATGTTGGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGTTTCCCCAAAATGCTTCACACCAATGGAGATAGTATTCCCCACTTATAAACCCATGATCTTCCACTAAATTAACCAATGTGGGACTCACTCCCAATAATCCTCAACATAGACTTCATGTTGTGATGTATCGTCTAGTTCATAACCCTTTTGGTTCATATTCTCGTTTATTTGGTTCATGTATGAGAATTAGTATTGCTATGCCTCTATAAAGCCTTGTCTAACATTGTTTTGAGGTGTGGAGTCATTGTCATTTTGTATTTGCCTAAAAGCAATTGAGAGGAACTTTGTAAGAGAGACTCTGTAGTGTGAGAGTGTGAGAGATACACTTGTAAACACTTTGATTATAGTGATTGACTACCACCCGTGGATATAGGGGAACTTCTTCTCTTCGAACCTCGTAAATCTTTGTGTCTCTTTTGTTTGATTTCTATTTGTGGGTGTGTGAGTGTGATTGATCTTGCTTCTACTTCCACTACAACAATTGAGTATCAGAACATTTTGGTGGTAGCATTTGAGTACAACAAGTGGTATCAGAGTGTTGTGGCTGCATTCTGTCATTTTTGCTTCAAGAGAGTTTCCTCCTTTCCCTTCTTCACTGTTGGAAAGAGGGATAGTGAAAGAGATAGGAATGGATAGGAATAGATGAAAGTTGCAGTGCTTTATTATTGTCTACTGACTCGATACTTAGAGGGTTACACAATTCCAGTATTTATAGCTAATACACTGGACCAGAAATAGTAAATCATAGAAATCTAGATAAACTCAAATCTAATAACAATCTCCTAAAATCTTGGTAGTTTGAATATTTGAATCATATCTAACTACTCTAAATCATATCTTCATTTTGAATACTTTGAATCATATCTCAACATTCACTTCCATCACATATAATTATTTTTAAACTGAGATTGTTAGTTTGCCTTAGAATGCTTATTTGAATTGTCTTTTGCTTTGTTATTTTATCCATGGTTGATGGCATACTTTTGCTACAAATATGTAAGATTTCTTGGAAGTACTTAAAGAGTTAAATATTTGCAGAATAAACCCCTAATCCCCAAAGTGGTCATGGTTTATCTCCCTGGCCTGGATGCTGCTCTATACATGTCACAGTCCAAGATACTTCCTACATTTAAAAGATTCTGTGGCAGTCCAAGGCCAGTTTTAGCTCTTAGGTACATGTTCGTTTATTGAACGTTGCATTTATTTACGTTTTAGAATGTTTCTGGGATTTACTTATGGTGCAGTCCTTATGTTTTCATTCTTTGTATTTTGGTAGCTGTATTTCAGATAGAATGCAAACAATTGATGCACTTTTGACGTGTAAGGTAAAGAGGAAGAGAGATGCAAACAGTGTAGACTTAAAGAATAAATTGACGTCTGAACAAGGTTTGTGAGCCATTGGCAAACTTAGATTTTGTCTAGCTCTTCGGCTGTTTATTTTCTTCTTGTGTTGTTTTAGTGTTCTTTCTATTCCTTTGTAGGAGTAGGGAATTTTATACTCTATTACCACATTGCTATTATCAATGTTACCATCTTGTTTTCGTCGTTGGGGGTATAACGTGGTGATAAACTTTTCTGAGTATAAAATTGTGCTACAAGGAGTTTAAAGGTGAGTCTACATAATTATGAGGGCATCAAGACCTCTATTGTAACAGCCCAAGCCCATCCAACCGATGTGGGATCTACAAGGGTGTAAAAACCTCTCCCTAGTAGACGCGTTTTAAAAACCTTGAGGGGAAGACCGAAAGGAAGAGTCCAAAGAAAACAATATCTGCTAGCGGTGAGCTTGGACTGTTACAAATGGTATCAGAGCCAAAAATTGGGCGATGTGCCAGCGAGGAGGCTGATCCTTGAAGGGGGGTGGACATGAGGCGGTGTGTCAGACGTTGGGTCCTGAAGGGGGGTGGATTGGGGAGTCCCACATCGATTGGAGAAGGGAACGAGTGCCAGCGAGGACGTTGGGCCCTGAAGGGGGGTGGATTGTGAGATCCCATATCGGTTGGGGAGGAGAACGGAACATTCTTTATAAGGGTGTGGAAACCTTTCCCTTGTAGATGCGTTTTAAAAACCTTGAGAGGAAGCCATAAAGGGAAACCTAAAAGAGGACAATATCTGCTAGTGGTGAGCTTGGGTTGTTTCAAATGGTACCAGAGCCAAACATCGGGCGATGTGCCAGCAAATAGGTTGATCCCCGAAGGAGGGTGGACACGAGGCGGTGTGCCAGACGCTGGGTCCCGAAGGGGGGTGGATTGGGGAGTCCTACATCGATTAGAGAAGGGAATGAGTGCCAGCGAGGACGTTGAGCCCTGAAGGGGGGTGGATTGTGAGATCCCACATCGATTGGAGAGGAGAACGGAATATTCTTTATAAGGGTGTGGAAACCTTTCCCTAGTAGACGCATTTTAAAAATCTTGAGAGGAAGCTTGAAAGGAATCAGAGCCAGACATCGGGCAATGTGCCAGTGAGGAGGCTGATCTCCGAAGGGGATGGACACGAGGCAGTGTGCCAGACGTTGGGTCCCGAAGGGGGGTGGATTGGGGAGTCCCGCATCGATTGGAGAAGAGAACGAGTGCCAGCGAGGACGTTGGGCCCTGAAGGGGGGTGGATTGTGAGATCCCACATCGATTGGAGAAGGGAACGAGTGCTAGCGAGGACGTTGGGCCGTGAAGGGAGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAATCTCTCTCTAGCAGACACGATTTAAAAACCTTGAGGGGAAGCCCGAAAGGAAAAACCCGAAGAGGACATTATCGGCTAGGGAAGAAGACATTTTAGTGGCAATATATTTGTTGAAAGTGGTTTTGATGCCTTTTATCACTCTTGCATTGTGATGAACTAACCTTTTGGCTTGTTTACATTCTCTTTCACTCTTTTTCTCTCAATATACTTTCTGGACTGTGCAGAAATATTTGGCCCTGAAAAAGACTCACCAATATCTATCAAACTCCCGAAGGAGTTACCTTTCCCTGTTACATATTATACACTAACTGCCAAAGAACTGGAAGACAATGGCTATCCATTCAATCAACCAGGTGATTTATCTTTATTACTTAATTGTTTTCGTTCGCTTCGAAAGCTCTATTTTCACCTTTTTTCGAAGTTAACTACCATGGATCCTCTCTCCATCCTCCCCTTCTCCCTCTCTCCCACCCTCACTGAAACTTTTTTTCGAGTTAGAAATTTCTATAGCTTAATTATTCATTTAATTCAGGTTTTATCCAAACACTTCCTGCTCCTATGGGATCTTCACCTTATGAAATGGTGGCACTTGACTGTGAAATGGTAAGTCTATTGTTTGTATTAAAGTTGTTTATAAGTGGAATGTTTATGTTACTGTCTACTTAGTCAGCGAAGACTCGATAATTCTCTTTGATTGTAATTCTTGATTTAAGATAATCATTTAATTCTTTTTTGGACTTTTATTAGTGTGTGACCTGTGAAGGGTTTGAGCTCACAAGAATAACCCTGGTGGATATGGCAGGACAGGTATGCACTCCATCTCTGCTTCGGTTATGTGCTTTGGCGAAAGCGTTGGATATTTGTATGAGGAAACTTAACTAATGCTTTGAAGACTTTAAATCAAGTTCTTGATAGTTTGTGCAACCATGTTGCTAAGTTAATTCAGTCATCTTTCTCAGCTTATGCTTCTTTTTGAAGTTAAAATGTCTATTCAATTAATTGAGCCACTGAAGTTTACCTCAGTAGCATACAGCTCCAGTTTGTTGAACTAAAGTTTTTATTACCTTTTCCTGTTATTTCAGATCGTCCTCGACAAATTGGTAAAACCGTCAAATGCAATTGTTGATTACAATACGAGGTAAGATCTTCTTGAGCTTTTAGTAGACAATAGATTGATGTGGATGATTAGAAGTTCTTACGATGTCTCATATTAAAAAAAAAAAAACTCATCAAGAGAAGTTTTTATGATGTGAAAATTGTAGCTTCCTGTAGTTGATTGATATGATGGTTTATGAAGCCGTTTTAGTTATATTGCATGTTTTACTATTCTTTAAATTACTTACCTTCGACAATGATGCTTGTTTTGTTTTGTTTAAGTGTGTATTAGCTTAAGCTCACCGTTAGCAGATATTGTCTTCTTTGGGCTTTCCCTTTTGGGCTTCTCTTTAAGGTTTTTAAAACGCGTCTGCTAGGGAGAGGTTTTCACACCCATGTAAAAAATGTTTTGTTCTCCTCCCCAACCGATGTGGGATCTTACAATCCACCCCCCTTCAAGGTCCAGCGTCCTCGCTGGCACTCGTTCCCTTCTCCAATCGATGTTGGACCACCCTCCAATCCACCCCTTTTGAGGTCTAGCATCCTTGTTGGCACACCGCCTCGTGTCCACCCCCCTTCGAGGCTCAACCTCATTGCTGGCACATCACTCGGTATCTGGCTTTGATACCATTTGTAATAACCCAAGCCCACCGCTAGCAGATATTGTCCTCCTTGGGCTTTCCCTCAAGGTTTTTAAAGCACGTCTGCTAGGGAGAGGTTTCCACATCCATATAAAGAATGCTTCATTCTCCTCCCCAACTGATGTGGGATCTCACAATCCACCCCCCTTCAAGGACTAGAGTCCTCGCTGGCACTCGTTCCCTTCTCCAATCGATGTAGGACCACCCCCCAATCCACCCCTTTCGAGGCCTAGCGTCCTTGCTGGCACACCGCCTCGTGTCAATCCCCTTCGGGGCTCAGCCTCATTGCTGGCACATTGCCCGGTGTTTAGCTCTGATACCATTTGTAATAGCCCAAGTCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTTGAGCTTCCCTTCAAGGTTTTTAAAACGCGTCTGCTAGGGAGGTTCTCACACCCTTATAAAGAATGCATCGTTTTCCTATCTAACCGATGTGGGATCTCACAAAAGTGAGTATATTCAAACTAACTAAAACAGATACCTTTGGGCTCGGGGTAGAGGAATCCCCCTCCCGAAGAAGAACTAACACAAAAAGGCTTTCTATTTTCTAATAATCACGGAAAACTGTAATCACAAAGATCTTTGCATAAAAAAATATAAAACTGTAATTAATGAAGAAATTTTTATGGTTTGAACACTACCAAGAGGTCAAGTTCTGATACTAAAAACAAAAGAAGCCTCAACATTCAACTTGTTCACAAATAGTCTAAGATTCCTTTCCTTTCACTTAAGCCAAAAGAAATCTTTATGGTTGATCTCCACTAAGGTAACTAATGCTTAAAGGGTAGAGAACTTTTGGGTGTACAAGAAGTTCTTAGCTTATCGGGTGTTAATGCCGGGTGCCCAACGTGTCCGTATGGCTGCTTTTCTCTAACTCACTTGTCTACATATAGTCTCAAGGCGGAATATACTAATGAAAAACGAGGAGCTAATCTCGTTCGCTTTTTCATGTGTTTTTTAACAGGTTTAGTGGAATTACATGTGAAATGTTAAATGAGGTTACCACTAGTCTAGAAGATGTTCAGGTTCTCTCTTTGACACTGTACTCACTGATGTTATCTACTTGCAGCAATCATTGTTTGAGGGAACTTTCTAATGTATTGGTGGTAAATGTACATTGCAGAAAGATTTTTTGAATCTTGTTCACAAGGAGACTGTTCTAGTTGGCCATTCACTGGAGAATGACTTGATGGCATTGAAGATCTCTCACGATCTCGTCGTTGATACTGCCGTTCTATATAAGCATCCCCGTGGTGGCTCTCATAAATCCGCCCTTCGGATTCTTGCTAAAAGATTTCTTTCCAGGGAGATACAGCAATCTAGCAATGGCCACGATAGTGTCGAAGATGCAAGAGCTACTATGGAACTTGCACTTCTTAAAATTAAACATGGTAAGTGACATTCTACTGTCTTTTTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACAATTTATAAGGGTGTGGAAACTTTCCCCTAG

mRNA sequence

TTTTTTTTTCAAGCACAAAGAGTAGGGCGAATCAATGGGGGGTTTTGTTTGATTCGCAGCCTTCCATGGGCGCAGGGCTTTCGAGTAAAAGACTTGCAGAAACTTCTTTCGCCTCTCTGTTCACTCTCTGCCCAGAACACAACACTATGCCATCTTCCAGTGTTTCAGCTTTGGATGCCAAAGAAGAGGGCAAGTCGAACGTGGGCAATACGGAGGAGGAGGAGGAGGAGGAGAAGCCCAGCTTCTTCGATATCTATGGAACCGATGCTAAAGCTGAGGTTCTTTTCAAAACTCCAGAATCTAATTCAACTTTAAGTCTGCAAGATGTTCAAGGGCTTGTAACTTGGGTGCTTGCGGAAGGTTTCATGCCATCGTGGGTTTTTATCAAGAATAAACCCCTAATCCCCAAAGTGGTCATGGTTTATCTCCCTGGCCTGGATGCTGCTCTATACATGTCACAGTCCAAGATACTTCCTACATTTAAAAGATTCTGTGGCAGTCCAAGGCCAGTTTTAGCTCTTAGCTGTATTTCAGATAGAATGCAAACAATTGATGCACTTTTGACGTGTAAGGTAAAGAGGAAGAGAGATGCAAACAGTGTAGACTTAAAGAATAAATTGACGTCTGAACAAGAAATATTTGGCCCTGAAAAAGACTCACCAATATCTATCAAACTCCCGAAGGAGTTACCTTTCCCTGTTACATATTATACACTAACTGCCAAAGAACTGGAAGACAATGGCTATCCATTCAATCAACCAGGTTTTATCCAAACACTTCCTGCTCCTATGGGATCTTCACCTTATGAAATGGTGGCACTTGACTGTGAAATGTGTGTGACCTGTGAAGGGTTTGAGCTCACAAGAATAACCCTGGTGGATATGGCAGGACAGATCGTCCTCGACAAATTGGTAAAACCGTCAAATGCAATTGTTGATTACAATACGAGGTTTAGTGGAATTACATGTGAAATGTTAAATGAGGTTACCACTAGTCTAGAAGATGTTCAGAAAGATTTTTTGAATCTTGTTCACAAGGAGACTGTTCTAGTTGGCCATTCACTGGAGAATGACTTGATGGCATTGAAGATCTCTCACGATCTCGTCGTTGATACTGCCGTTCTATATAAGCATCCCCGTGGTGGCTCTCATAAATCCGCCCTTCGGATTCTTGCTAAAAGATTTCTTTCCAGGGAGATACAGCAATCTAGCAATGGCCACGATAGTGTCGAAGATGCAAGAGCTACTATGGAACTTGCACTTCTTAAAATTAAACATGGTAAGTGACATTCTACTGTCTTTTTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACAATTTATAAGGGTGTGGAAACTTTCCCCTAG

Coding sequence (CDS)

ATGGGCGCAGGGCTTTCGAGTAAAAGACTTGCAGAAACTTCTTTCGCCTCTCTGTTCACTCTCTGCCCAGAACACAACACTATGCCATCTTCCAGTGTTTCAGCTTTGGATGCCAAAGAAGAGGGCAAGTCGAACGTGGGCAATACGGAGGAGGAGGAGGAGGAGGAGAAGCCCAGCTTCTTCGATATCTATGGAACCGATGCTAAAGCTGAGGTTCTTTTCAAAACTCCAGAATCTAATTCAACTTTAAGTCTGCAAGATGTTCAAGGGCTTGTAACTTGGGTGCTTGCGGAAGGTTTCATGCCATCGTGGGTTTTTATCAAGAATAAACCCCTAATCCCCAAAGTGGTCATGGTTTATCTCCCTGGCCTGGATGCTGCTCTATACATGTCACAGTCCAAGATACTTCCTACATTTAAAAGATTCTGTGGCAGTCCAAGGCCAGTTTTAGCTCTTAGCTGTATTTCAGATAGAATGCAAACAATTGATGCACTTTTGACGTGTAAGGTAAAGAGGAAGAGAGATGCAAACAGTGTAGACTTAAAGAATAAATTGACGTCTGAACAAGAAATATTTGGCCCTGAAAAAGACTCACCAATATCTATCAAACTCCCGAAGGAGTTACCTTTCCCTGTTACATATTATACACTAACTGCCAAAGAACTGGAAGACAATGGCTATCCATTCAATCAACCAGGTTTTATCCAAACACTTCCTGCTCCTATGGGATCTTCACCTTATGAAATGGTGGCACTTGACTGTGAAATGTGTGTGACCTGTGAAGGGTTTGAGCTCACAAGAATAACCCTGGTGGATATGGCAGGACAGATCGTCCTCGACAAATTGGTAAAACCGTCAAATGCAATTGTTGATTACAATACGAGGTTTAGTGGAATTACATGTGAAATGTTAAATGAGGTTACCACTAGTCTAGAAGATGTTCAGAAAGATTTTTTGAATCTTGTTCACAAGGAGACTGTTCTAGTTGGCCATTCACTGGAGAATGACTTGATGGCATTGAAGATCTCTCACGATCTCGTCGTTGATACTGCCGTTCTATATAAGCATCCCCGTGGTGGCTCTCATAAATCCGCCCTTCGGATTCTTGCTAAAAGATTTCTTTCCAGGGAGATACAGCAATCTAGCAATGGCCACGATAGTGTCGAAGATGCAAGAGCTACTATGGAACTTGCACTTCTTAAAATTAAACATGGTAAGTGA

Protein sequence

MGAGLSSKRLAETSFASLFTLCPEHNTMPSSSVSALDAKEEGKSNVGNTEEEEEEEKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMVALDCEMCVTCEGFELTRITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDSVEDARATMELALLKIKHGK

Homology

[Close]

BLAST of Carg26648 vs. NCBI nr
Match: KAG7025022.1 (Small RNA degrading nuclease 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 800.0 bits (2065), Expect = 9.2e-228
Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 0


Query: 1   MGAGLSSKRLAETSFASLFTLCPEHNTMPSSSVSALDAKEEGKSNVGNTEEEEEEEKPSF 60
           MGAGLSSKRLAETSFASLFTLCPEHNTMPSSSVSALDAKEEGKSNVGNTEEEEEEEKPSF
Sbjct: 1   MGAGLSSKRLAETSFASLFTLCPEHNTMPSSSVSALDAKEEGKSNVGNTEEEEEEEKPSF 60

Query: 61  FDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVY 120
           FDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVY
Sbjct: 61  FDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVY 120

Query: 121 LPGLDAALYMSQSKILPTFKRFCGSPRPVLALSCISDRMQTIDALLTCKVKRKRDANSVD 180
           LPGLDAALYMSQSKILPTFKRFCGSPRPVLALSCISDRMQTIDALLTCKVKRKRDANSVD
Sbjct: 121 LPGLDAALYMSQSKILPTFKRFCGSPRPVLALSCISDRMQTIDALLTCKVKRKRDANSVD 180

Query: 181 LKNKLTSEQEIFGPEKDSPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPA 240
           LKNKLTSEQEIFGPEKDSPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPA
Sbjct: 181 LKNKLTSEQEIFGPEKDSPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPA 240

Query: 241 PMGSSPYEMVALDCEMCVTCEGFELTRITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGIT 300
           PMGSSPYEMVALDCEMCVTCEGFELTRITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGIT
Sbjct: 241 PMGSSPYEMVALDCEMCVTCEGFELTRITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGIT 300

Query: 301 CEMLNEVTTSLEDVQKDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTAVLYKHPRGG 360
           CEMLNEVTTSLEDVQKDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTAVLYKHPRGG
Sbjct: 301 CEMLNEVTTSLEDVQKDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTAVLYKHPRGG 360

Query: 361 SHKSALRILAKRFLSREIQQSSNGHDSVEDARATMELALLKIKHGK 407
           SHKSALRILAKRFLSREIQQSSNGHDSVEDARATMELALLKIKHGK
Sbjct: 361 SHKSALRILAKRFLSREIQQSSNGHDSVEDARATMELALLKIKHGK 406

[Close]

BLAST of Carg26648 vs. NCBI nr
Match: KAG6592160.1 (Small RNA degrading nuclease 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 776.2 bits (2003), Expect = 1.4e-220
Identity = 395/405 (97.53%), Postives = 400/405 (98.77%), Query Frame = 0


Query: 1   MGAGLSSKRLAETSFASLFTLCPEHNTMPSSSVSALDAKEEGKSNVGNTEEEEEEEKPSF 60
           MGAGLSSKRLAETSFASLFTLCPEH TMPSSSVSALDAKEEGKSNVGNT  E+EEEKPSF
Sbjct: 1   MGAGLSSKRLAETSFASLFTLCPEHKTMPSSSVSALDAKEEGKSNVGNT--EKEEEKPSF 60

Query: 61  FDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVY 120
           FDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVY
Sbjct: 61  FDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVY 120

Query: 121 LPGLDAALYMSQSKILPTFKRFCGSPRPVLALSCISDRMQTIDALLTCKVKRKRDANSVD 180
           LPGLDAALYMS SKILPTFKRFCGSPRPVLALSCISDRMQTIDALLTCKVKRKRDANSVD
Sbjct: 121 LPGLDAALYMSLSKILPTFKRFCGSPRPVLALSCISDRMQTIDALLTCKVKRKRDANSVD 180

Query: 181 LKNKLTSEQEIFGPEKDSPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPA 240
           LKNKLTSEQEIFGPEKD+PISIKLPKE+PFPVTYYTLTAKELEDNGYPFNQPGFIQTLPA
Sbjct: 181 LKNKLTSEQEIFGPEKDTPISIKLPKEIPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPA 240

Query: 241 PMGSSPYEMVALDCEMCVTCEGFELTRITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGIT 300
           PMGSSPYEM+ALDCEMCVTCEGFELTRITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGIT
Sbjct: 241 PMGSSPYEMLALDCEMCVTCEGFELTRITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGIT 300

Query: 301 CEMLNEVTTSLEDVQKDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTAVLYKHPRGG 360
           CEMLNEVTTSLEDVQKDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTAVLYKHPRGG
Sbjct: 301 CEMLNEVTTSLEDVQKDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTAVLYKHPRGG 360

Query: 361 SHKSALRILAKRFLSREIQQSSNGHDSVEDARATMELALLKIKHG 406
           SHKSALRILAKRFLSREIQQSS GHDSVEDARATMELA+LKIKHG
Sbjct: 361 SHKSALRILAKRFLSREIQQSSIGHDSVEDARATMELAVLKIKHG 403

[Close]

BLAST of Carg26648 vs. NCBI nr
Match: XP_023534811.1 (small RNA degrading nuclease 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 736.1 bits (1899), Expect = 1.6e-208
Identity = 374/378 (98.94%), Postives = 376/378 (99.47%), Query Frame = 0


Query: 28  MPSSSVSALDAKEEGKSNVGNTEEEEEEEKPSFFDIYGTDAKAEVLFKTPESNSTLSLQD 87
           MPSSSVSALDAKEEGKSNVGNT  EEEE+KPSFFDIYGTDAKAEVLFKTPESNSTLSLQD
Sbjct: 1   MPSSSVSALDAKEEGKSNVGNT--EEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQD 60

Query: 88  VQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPR 147
           VQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPR
Sbjct: 61  VQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPR 120

Query: 148 PVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKE 207
           PVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKE
Sbjct: 121 PVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKE 180

Query: 208 LPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMVALDCEMCVTCEGFELTR 267
           LPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEM+ALDCEMCVTCEGFELTR
Sbjct: 181 LPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEMCVTCEGFELTR 240

Query: 268 ITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETV 327
           ITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETV
Sbjct: 241 ITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETV 300

Query: 328 LVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDS 387
           LVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDS
Sbjct: 301 LVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDS 360

Query: 388 VEDARATMELALLKIKHG 406
           VEDARATMELALLKIKHG
Sbjct: 361 VEDARATMELALLKIKHG 376

[Close]

BLAST of Carg26648 vs. NCBI nr
Match: XP_022937364.1 (small RNA degrading nuclease 5-like [Cucurbita moschata])

HSP 1 Score: 734.2 bits (1894), Expect = 6.2e-208
Identity = 373/378 (98.68%), Postives = 376/378 (99.47%), Query Frame = 0


Query: 28  MPSSSVSALDAKEEGKSNVGNTEEEEEEEKPSFFDIYGTDAKAEVLFKTPESNSTLSLQD 87
           MPSSSVSALDAKEEGKSNVGNT  EEEE+KPSFFDIYGTDAKAEVLFKTPESNSTLSLQD
Sbjct: 1   MPSSSVSALDAKEEGKSNVGNT--EEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQD 60

Query: 88  VQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPR 147
           VQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPR
Sbjct: 61  VQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPR 120

Query: 148 PVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKE 207
           PVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKE
Sbjct: 121 PVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKE 180

Query: 208 LPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMVALDCEMCVTCEGFELTR 267
           LPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEM+ALDCEMCVTCEGFELTR
Sbjct: 181 LPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEMCVTCEGFELTR 240

Query: 268 ITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETV 327
           ITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETV
Sbjct: 241 ITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETV 300

Query: 328 LVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDS 387
           LVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGH+S
Sbjct: 301 LVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHNS 360

Query: 388 VEDARATMELALLKIKHG 406
           VEDARATMELALLKIKHG
Sbjct: 361 VEDARATMELALLKIKHG 376

[Close]

BLAST of Carg26648 vs. NCBI nr
Match: XP_022974960.1 (small RNA degrading nuclease 5-like [Cucurbita maxima])

HSP 1 Score: 730.3 bits (1884), Expect = 8.9e-207
Identity = 372/380 (97.89%), Postives = 375/380 (98.68%), Query Frame = 0


Query: 28  MPSSSVSALDAKEEGKSNVGNT--EEEEEEEKPSFFDIYGTDAKAEVLFKTPESNSTLSL 87
           MPSSSVSALDAKEEGKSNVGNT  EEEEEEEKPSFFDIYGTDAKAEVLFKTPESNSTLSL
Sbjct: 1   MPSSSVSALDAKEEGKSNVGNTEEEEEEEEEKPSFFDIYGTDAKAEVLFKTPESNSTLSL 60

Query: 88  QDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGS 147
           QDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGS
Sbjct: 61  QDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGS 120

Query: 148 PRPVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLP 207
           PRPVLALSCISDRMQTIDALLTCKVKRKRDANSV LKNK+TSEQEIFGPEKDSPISIKLP
Sbjct: 121 PRPVLALSCISDRMQTIDALLTCKVKRKRDANSVGLKNKMTSEQEIFGPEKDSPISIKLP 180

Query: 208 KELPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMVALDCEMCVTCEGFEL 267
           KELPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEM+ALDCEMCVTCEGFEL
Sbjct: 181 KELPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEMCVTCEGFEL 240

Query: 268 TRITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKE 327
           TRITLVDMAGQIVLDKLVKPSNAIV+YNTRFSGITCEMLNEVTTSLEDVQKD LNLVHKE
Sbjct: 241 TRITLVDMAGQIVLDKLVKPSNAIVNYNTRFSGITCEMLNEVTTSLEDVQKDLLNLVHKE 300

Query: 328 TVLVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGH 387
           TVLVGHSLENDLMALKISHD VVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGH
Sbjct: 301 TVLVGHSLENDLMALKISHDRVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGH 360

Query: 388 DSVEDARATMELALLKIKHG 406
           DSVEDARATMELALLKIKHG
Sbjct: 361 DSVEDARATMELALLKIKHG 380

[Close]

BLAST of Carg26648 vs. ExPASy Swiss-Prot
Match: Q8L7M4 (Small RNA degrading nuclease 5 OS=Arabidopsis thaliana OX=3702 GN=SDN5 PE=2 SV=2)

HSP 1 Score: 454.1 bits (1167), Expect = 1.6e-126
Identity = 231/363 (63.64%), Postives = 283/363 (77.96%), Query Frame = 0


Query: 43  KSNVGNTEEEEEEEKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMP 102
           KSN GN          SFFDIYG +AKAE+ FK+PE  +TL+LQDVQGLVTWVLAEGFMP
Sbjct: 23  KSNTGN----------SFFDIYGPEAKAELDFKSPE--TTLNLQDVQGLVTWVLAEGFMP 82

Query: 103 SWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPVLALSCISDRMQTI 162
           SWVFIKNKPLIPKVV++YLPGLDAALY+S SK L + K  CG+P  +LALSC+ D M+TI
Sbjct: 83  SWVFIKNKPLIPKVVLLYLPGLDAALYLSHSKTLSSLKSCCGNPMALLALSCVVDEMRTI 142

Query: 163 DALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELPFPVTYYTLTAKEL 222
           D +LTCK ++K+   S      L S  E       S   ++L K++PFPV+YYTL+ KE+
Sbjct: 143 DTILTCKGRKKKTVTSSVEPPPLVSSPEACNLMGKS--FVELTKDIPFPVSYYTLSQKEM 202

Query: 223 EDNGYPFNQPGFIQTLPAPMGSSPYEMVALDCEMCVTCEGFELTRITLVDMAGQIVLDKL 282
           E NGY F +     TLPAP GS P E+VALDCEMC+T EG ELTR+TLVD+ GQ++LDKL
Sbjct: 203 EQNGYTFEKLELTPTLPAPSGSCPPEIVALDCEMCITKEGLELTRVTLVDIQGQVLLDKL 262

Query: 283 VKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLVGHSLENDLMALKI 342
           V P+N I DYNTR+SGIT  M+  VTT+L+D+Q++FL LV KET+LVGHSLENDL++LKI
Sbjct: 263 VMPTNPITDYNTRYSGITAVMMEGVTTTLKDIQEEFLKLVFKETILVGHSLENDLLSLKI 322

Query: 343 SHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDSVEDARATMELALLKI 402
           SH+LV+DTAVLYKHP G S+K+ LRILAK+FL+REIQ+S +GHDS EDA+A M+LALLKI
Sbjct: 323 SHNLVIDTAVLYKHPHGRSYKTKLRILAKKFLAREIQESESGHDSAEDAKAAMDLALLKI 371

Query: 403 KHG 406
           KHG
Sbjct: 383 KHG 371

[Close]

BLAST of Carg26648 vs. ExPASy Swiss-Prot
Match: O94443 (Uncharacterized exonuclease C637.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC637.09 PE=3 SV=2)

HSP 1 Score: 178.7 bits (452), Expect = 1.3e-43
Identity = 123/359 (34.26%), Postives = 184/359 (51.25%), Query Frame = 0


Query: 75  KTPESN--STLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ 134
           +T E+N    L + D+Q LV W LA+G  PSWV ++NK +I + V++ +PGL+ + +  Q
Sbjct: 90  QTTENNLQKPLKISDLQELVFWCLADGQAPSWVLVRNKQMIHRAVILLVPGLEPSQFGFQ 149

Query: 135 -------SKILP----------------TFKRFCGSPRPVLALSCISDRMQTIDALLTCK 194
                  S +LP                 F R   +  P       S     + + L+ +
Sbjct: 150 PVRGNKHSFLLPNLLNENGPIQLPDFCEVFDRAWPTRSPGDRFRVFSPVNAFLQSPLSNE 209

Query: 195 VKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELPFPVTYYTLTAKELEDNGYPF 254
            K+KRD        K T     F    D  +S +   E  +P+    +  +E+       
Sbjct: 210 QKKKRD--------KETRAMASFSKPSDYLMSYESFIEDEYPLHPTVMKGEEV------- 269

Query: 255 NQPGFIQTLPAPMGSSPY--EMVALDCEMCVTCEGFELTRITLVDMAGQIVLDKLVKPSN 314
            QP           S P   +++A+DCEM  T  G E+ R+T+VDM  +++ D+ VKP +
Sbjct: 270 TQPSGWVASAGDFHSPPINPKILAIDCEMVRTENGLEIARVTIVDMKSEVIYDEFVKPES 329

Query: 315 AIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLVGHSLENDLMALKISHDLV 374
            + DY T++SGIT E L  VTT L DVQ      V   TVL+GHSL +DL  LK +H  +
Sbjct: 330 PVTDYVTQYSGITEEKLRNVTTVLSDVQSYLKKTVDNNTVLLGHSLNSDLNCLKFTHPHI 389

Query: 375 VDTAVLYKHPRGGSHKSALRILAKRFLSREIQQS-SNGHDSVEDARATMELALLKIKHG 406
           +DTA +Y H RG   K +L+ LA ++L REIQ++ + GHDS EDA A ++L  LK+K+G
Sbjct: 390 IDTANIYNHTRGPPSKPSLKWLATKWLRREIQKAGALGHDSAEDALACVDLLKLKVKNG 433

[Close]

BLAST of Carg26648 vs. ExPASy Swiss-Prot
Match: P53331 (RNA exonuclease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RNH70 PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.0e-40
Identity = 110/347 (31.70%), Postives = 176/347 (50.72%), Query Frame = 0


Query: 83  LSLQDVQGLVTWVL-AEGFMPSWVFIKNKPLIPKVVMVYLPGL----------------D 142
           + ++DV+ +  ++L AE   P W+ I N+  + K++++++PGL                D
Sbjct: 65  IGIKDVRDMTQYLLQAENNSPKWIDICNRSSLQKMIVLFIPGLQPDDFENGKNTFNEISD 124

Query: 143 AALYMSQSKILPTFKRFCGSPRPVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKL 202
                   +I  TF  F     PV+A           ++ +   + +    N +      
Sbjct: 125 DNFKYIPGEIASTFHTF-----PVMAPGSKMTLFSPYNSFINVGLSKMEKINKLK----- 184

Query: 203 TSEQEIFGPEKDSPISIKLPKELPFPVTYYTLTAKELEDNGYPFN------QPGFIQTLP 262
                            +L K+    +    L+ ++L  N YP +         ++QT+ 
Sbjct: 185 -----------------ELQKKKKITINDLVLSEQQLVANDYPLDSGDTNFDTDWVQTVD 244

Query: 263 APMGSSPYEMVALDCEMCVTCEGFELTRITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGI 322
              G S   + ALDCEMC++ +G  LTRI+LV+   +++ ++LVKP   IVDY TR+SGI
Sbjct: 245 FTHGGS--HIFALDCEMCLSEQGLVLTRISLVNFDNEVIYEELVKPDVPIVDYLTRYSGI 304

Query: 323 TCEMLN-EVTTSLEDVQKDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTAVLYKHPR 382
           T E L      +L +VQKD L ++ +  +L+GHSL+NDL  +K+ H LVVDTA++Y H  
Sbjct: 305 TEEKLTVGAKKTLREVQKDLLKIISRSDILIGHSLQNDLKVMKLKHPLVVDTAIIYHHKA 364

Query: 383 GGSHKSALRILAKRFLSREIQQSSNGHDSVEDARATMELALLKIKHG 406
           G   K +L+ L++ FL++ IQ     HDSVEDARA +EL  LKI +G
Sbjct: 365 GDPFKPSLKYLSETFLNKSIQNGE--HDSVEDARACLELTKLKILNG 380

[Close]

BLAST of Carg26648 vs. ExPASy Swiss-Prot
Match: Q8IX06 (Putative exonuclease GOR OS=Homo sapiens OX=9606 GN=REXO1L1P PE=5 SV=2)

HSP 1 Score: 159.8 bits (403), Expect = 6.3e-38
Identity = 84/186 (45.16%), Postives = 120/186 (64.52%), Query Frame = 0


Query: 219 AKELEDNGYPFNQPGFIQTLPAPMGSSPYE-MVALDCEMCVTCEGFELTRITLVDMAGQI 278
           AK+   +G   +  GF++T    +    Y  + ALDCEMC T  G ELTR+T+VD   ++
Sbjct: 470 AKQHVRDGRKESLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRV 529

Query: 279 VLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLVGHSLENDL 338
           V D  VKP N IVDYNTRFSG+T   + + + +L  VQ   L+    +T+L+GHSLE+DL
Sbjct: 530 VYDTFVKPDNEIVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDL 589

Query: 339 MALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDSVEDARATMEL 398
           +ALK+ H  VVDTAVL+ H  G  +K +LR LA  +L++ IQ S +GH+S EDA A ++L
Sbjct: 590 LALKLIHSTVVDTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDASACLQL 649

Query: 399 ALLKIK 404
            + K++
Sbjct: 650 VMWKVR 655

[Close]

BLAST of Carg26648 vs. ExPASy Swiss-Prot
Match: P48778 (Exonuclease GOR OS=Pan troglodytes OX=9598 GN=REXO1L1 PE=2 SV=3)

HSP 1 Score: 158.7 bits (400), Expect = 1.4e-37
Identity = 83/186 (44.62%), Postives = 119/186 (63.98%), Query Frame = 0


Query: 219 AKELEDNGYPFNQPGFIQTLPAPMGSSPYE-MVALDCEMCVTCEGFELTRITLVDMAGQI 278
           AK+   +G   +  GF++T    +    Y  + ALDCEMC T  G ELTR+T+VD   ++
Sbjct: 376 AKQHVRDGRKDSLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRV 435

Query: 279 VLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLVGHSLENDL 338
           V D  VKP N IVDYNTRFSG+T   + + + +L  VQ   L+    +T+L+GHSLE+DL
Sbjct: 436 VYDTFVKPDNEIVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDL 495

Query: 339 MALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDSVEDARATMEL 398
           +ALK+ H  V+DTAVL+ H  G  +K +LR LA  +L + IQ S +GH+S EDA A ++L
Sbjct: 496 LALKLIHSTVLDTAVLFPHYLGFPYKRSLRNLAADYLGQIIQDSQDGHNSSEDANACLQL 555

Query: 399 ALLKIK 404
            + K++
Sbjct: 556 VMWKVR 561

[Close]

BLAST of Carg26648 vs. ExPASy TrEMBL
Match: A0A6J1FAZ1 (small RNA degrading nuclease 5-like OS=Cucurbita moschata OX=3662 GN=LOC111443672 PE=4 SV=1)

HSP 1 Score: 734.2 bits (1894), Expect = 3.0e-208
Identity = 373/378 (98.68%), Postives = 376/378 (99.47%), Query Frame = 0


Query: 28  MPSSSVSALDAKEEGKSNVGNTEEEEEEEKPSFFDIYGTDAKAEVLFKTPESNSTLSLQD 87
           MPSSSVSALDAKEEGKSNVGNT  EEEE+KPSFFDIYGTDAKAEVLFKTPESNSTLSLQD
Sbjct: 1   MPSSSVSALDAKEEGKSNVGNT--EEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQD 60

Query: 88  VQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPR 147
           VQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPR
Sbjct: 61  VQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPR 120

Query: 148 PVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKE 207
           PVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKE
Sbjct: 121 PVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKE 180

Query: 208 LPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMVALDCEMCVTCEGFELTR 267
           LPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEM+ALDCEMCVTCEGFELTR
Sbjct: 181 LPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEMCVTCEGFELTR 240

Query: 268 ITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETV 327
           ITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETV
Sbjct: 241 ITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETV 300

Query: 328 LVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDS 387
           LVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGH+S
Sbjct: 301 LVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHNS 360

Query: 388 VEDARATMELALLKIKHG 406
           VEDARATMELALLKIKHG
Sbjct: 361 VEDARATMELALLKIKHG 376

[Close]

BLAST of Carg26648 vs. ExPASy TrEMBL
Match: A0A6J1IFC2 (small RNA degrading nuclease 5-like OS=Cucurbita maxima OX=3661 GN=LOC111473789 PE=4 SV=1)

HSP 1 Score: 730.3 bits (1884), Expect = 4.3e-207
Identity = 372/380 (97.89%), Postives = 375/380 (98.68%), Query Frame = 0


Query: 28  MPSSSVSALDAKEEGKSNVGNT--EEEEEEEKPSFFDIYGTDAKAEVLFKTPESNSTLSL 87
           MPSSSVSALDAKEEGKSNVGNT  EEEEEEEKPSFFDIYGTDAKAEVLFKTPESNSTLSL
Sbjct: 1   MPSSSVSALDAKEEGKSNVGNTEEEEEEEEEKPSFFDIYGTDAKAEVLFKTPESNSTLSL 60

Query: 88  QDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGS 147
           QDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGS
Sbjct: 61  QDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGS 120

Query: 148 PRPVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLP 207
           PRPVLALSCISDRMQTIDALLTCKVKRKRDANSV LKNK+TSEQEIFGPEKDSPISIKLP
Sbjct: 121 PRPVLALSCISDRMQTIDALLTCKVKRKRDANSVGLKNKMTSEQEIFGPEKDSPISIKLP 180

Query: 208 KELPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMVALDCEMCVTCEGFEL 267
           KELPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEM+ALDCEMCVTCEGFEL
Sbjct: 181 KELPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEMCVTCEGFEL 240

Query: 268 TRITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKE 327
           TRITLVDMAGQIVLDKLVKPSNAIV+YNTRFSGITCEMLNEVTTSLEDVQKD LNLVHKE
Sbjct: 241 TRITLVDMAGQIVLDKLVKPSNAIVNYNTRFSGITCEMLNEVTTSLEDVQKDLLNLVHKE 300

Query: 328 TVLVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGH 387
           TVLVGHSLENDLMALKISHD VVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGH
Sbjct: 301 TVLVGHSLENDLMALKISHDRVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGH 360

Query: 388 DSVEDARATMELALLKIKHG 406
           DSVEDARATMELALLKIKHG
Sbjct: 361 DSVEDARATMELALLKIKHG 380

[Close]

BLAST of Carg26648 vs. ExPASy TrEMBL
Match: A0A6J1J229 (small RNA degrading nuclease 5-like OS=Cucurbita maxima OX=3661 GN=LOC111480556 PE=4 SV=1)

HSP 1 Score: 682.2 bits (1759), Expect = 1.3e-192
Identity = 341/378 (90.21%), Postives = 360/378 (95.24%), Query Frame = 0


Query: 28  MPSSSVSALDAKEEGKSNVGNTEEEEEEEKPSFFDIYGTDAKAEVLFKTPESNSTLSLQD 87
           MPSS VSALD++EEG+SNVG T     +E PSFFDIYGTDAKAE+LFKTPESNSTLSLQD
Sbjct: 1   MPSSGVSALDSEEEGRSNVGKT-----KENPSFFDIYGTDAKAEILFKTPESNSTLSLQD 60

Query: 88  VQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPR 147
           VQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ+KILPTFK+ CG+PR
Sbjct: 61  VQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPR 120

Query: 148 PVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKE 207
            VLALSCISDRMQTIDALLTCKVKRKRDANSVDLKN LTSEQE FGPEK++PISIKLPKE
Sbjct: 121 AVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQERFGPEKETPISIKLPKE 180

Query: 208 LPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMVALDCEMCVTCEGFELTR 267
           LPFPVTYYTLTAKELEDNGYPFNQPGFI TLPAP+GSSPYEM+ALDCEMCVTCEGFELTR
Sbjct: 181 LPFPVTYYTLTAKELEDNGYPFNQPGFIHTLPAPIGSSPYEMLALDCEMCVTCEGFELTR 240

Query: 268 ITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETV 327
           ITLVDM GQ+VLDKLVKPSNAIVDYNTRFSGIT EML++VTTSLEDVQK FLNLVHKETV
Sbjct: 241 ITLVDMEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLSQVTTSLEDVQKVFLNLVHKETV 300

Query: 328 LVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDS 387
           L+GHSLENDLMALKISHDLV+DTAVLYKHPRGGSHKSALRIL K+FLSREIQQS NGHDS
Sbjct: 301 LIGHSLENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDS 360

Query: 388 VEDARATMELALLKIKHG 406
           +EDARATMELALLKIKHG
Sbjct: 361 IEDARATMELALLKIKHG 373

[Close]

BLAST of Carg26648 vs. ExPASy TrEMBL
Match: A0A6J1EE80 (small RNA degrading nuclease 5-like OS=Cucurbita moschata OX=3662 GN=LOC111433387 PE=4 SV=1)

HSP 1 Score: 678.3 bits (1749), Expect = 1.9e-191
Identity = 339/378 (89.68%), Postives = 359/378 (94.97%), Query Frame = 0


Query: 28  MPSSSVSALDAKEEGKSNVGNTEEEEEEEKPSFFDIYGTDAKAEVLFKTPESNSTLSLQD 87
           MPSS VSALD++EEG+S+VG T     +E PSFFDIYGTDAKAE+LFKTPESNSTLSLQD
Sbjct: 1   MPSSGVSALDSEEEGRSDVGKT-----KENPSFFDIYGTDAKAEILFKTPESNSTLSLQD 60

Query: 88  VQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPR 147
           VQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ+KILPTFK+ CG+PR
Sbjct: 61  VQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPR 120

Query: 148 PVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKE 207
            VLALSCISDRMQTIDALLTCKVKRKRDANSVDLKN LTSEQE  GPEK++PISIKLPKE
Sbjct: 121 AVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQERLGPEKETPISIKLPKE 180

Query: 208 LPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMVALDCEMCVTCEGFELTR 267
           LPFPVTYYTLTAKELEDNGYPFNQPGFI TLPAP+GSSPYEM+ALDCEMCVTCEGFELTR
Sbjct: 181 LPFPVTYYTLTAKELEDNGYPFNQPGFIHTLPAPIGSSPYEMLALDCEMCVTCEGFELTR 240

Query: 268 ITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETV 327
           ITLVDM GQ+VLDKLVKPSNAIVDYNTRFSGIT EML++VTTSLEDVQK FLNLVHKETV
Sbjct: 241 ITLVDMEGQVVLDKLVKPSNAIVDYNTRFSGITSEMLSQVTTSLEDVQKVFLNLVHKETV 300

Query: 328 LVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDS 387
           L+GHSLENDLMALKISHDLV+DTAVLYKHPRGGSHKSALRIL K+FLSREIQQS NGHDS
Sbjct: 301 LIGHSLENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDS 360

Query: 388 VEDARATMELALLKIKHG 406
           +EDARATMELALLKIKHG
Sbjct: 361 IEDARATMELALLKIKHG 373

[Close]

BLAST of Carg26648 vs. ExPASy TrEMBL
Match: A0A5D3DMF7 (Small RNA degrading nuclease 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00380 PE=4 SV=1)

HSP 1 Score: 671.0 bits (1730), Expect = 3.1e-189
Identity = 339/378 (89.68%), Postives = 355/378 (93.92%), Query Frame = 0


Query: 28  MPSSSVSALDAKEEGKSNVGNTEEEEEEEKPSFFDIYGTDAKAEVLFKTPESNSTLSLQD 87
           MPSSSVS LD+++EGKSNVG T     +EKP FFDIYG DAKAEVLFKTPESNSTLSLQD
Sbjct: 1   MPSSSVSGLDSEDEGKSNVGKT-----QEKPCFFDIYGADAKAEVLFKTPESNSTLSLQD 60

Query: 88  VQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPR 147
           VQ LVTWVLAEGFMP WVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFK+FCGSPR
Sbjct: 61  VQQLVTWVLAEGFMPRWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKKFCGSPR 120

Query: 148 PVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKE 207
            VLALSCISDRMQTIDALLTCKVKRKRDAN VDL NKLTSE EI G EK++PISI+LPKE
Sbjct: 121 AVLALSCISDRMQTIDALLTCKVKRKRDANKVDLNNKLTSEPEISGLEKEAPISIQLPKE 180

Query: 208 LPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMVALDCEMCVTCEGFELTR 267
           LPFPVTYYTLTAK+LEDNGYPFNQPGFIQTLPAP G SP EM+ALDCEMCVTCEGFELTR
Sbjct: 181 LPFPVTYYTLTAKQLEDNGYPFNQPGFIQTLPAPEGCSPNEMLALDCEMCVTCEGFELTR 240

Query: 268 ITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETV 327
           ITLVDM GQ++LDKLVKPSNAIVDYNTRFSGITCEML+ VTTSLEDVQ+DFLNLVHKETV
Sbjct: 241 ITLVDMEGQVLLDKLVKPSNAIVDYNTRFSGITCEMLSGVTTSLEDVQRDFLNLVHKETV 300

Query: 328 LVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDS 387
           LVGHSLENDL+ALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQS NGHDS
Sbjct: 301 LVGHSLENDLIALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSGNGHDS 360

Query: 388 VEDARATMELALLKIKHG 406
           +EDARATMELALLKIKHG
Sbjct: 361 IEDARATMELALLKIKHG 373

[Close]

BLAST of Carg26648 vs. TAIR 10
Match: AT5G25800.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 454.1 bits (1167), Expect = 1.2e-127
Identity = 231/363 (63.64%), Postives = 283/363 (77.96%), Query Frame = 0


Query: 43  KSNVGNTEEEEEEEKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMP 102
           KSN GN          SFFDIYG +AKAE+ FK+PE  +TL+LQDVQGLVTWVLAEGFMP
Sbjct: 23  KSNTGN----------SFFDIYGPEAKAELDFKSPE--TTLNLQDVQGLVTWVLAEGFMP 82

Query: 103 SWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPVLALSCISDRMQTI 162
           SWVFIKNKPLIPKVV++YLPGLDAALY+S SK L + K  CG+P  +LALSC+ D M+TI
Sbjct: 83  SWVFIKNKPLIPKVVLLYLPGLDAALYLSHSKTLSSLKSCCGNPMALLALSCVVDEMRTI 142

Query: 163 DALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELPFPVTYYTLTAKEL 222
           D +LTCK ++K+   S      L S  E       S   ++L K++PFPV+YYTL+ KE+
Sbjct: 143 DTILTCKGRKKKTVTSSVEPPPLVSSPEACNLMGKS--FVELTKDIPFPVSYYTLSQKEM 202

Query: 223 EDNGYPFNQPGFIQTLPAPMGSSPYEMVALDCEMCVTCEGFELTRITLVDMAGQIVLDKL 282
           E NGY F +     TLPAP GS P E+VALDCEMC+T EG ELTR+TLVD+ GQ++LDKL
Sbjct: 203 EQNGYTFEKLELTPTLPAPSGSCPPEIVALDCEMCITKEGLELTRVTLVDIQGQVLLDKL 262

Query: 283 VKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLVGHSLENDLMALKI 342
           V P+N I DYNTR+SGIT  M+  VTT+L+D+Q++FL LV KET+LVGHSLENDL++LKI
Sbjct: 263 VMPTNPITDYNTRYSGITAVMMEGVTTTLKDIQEEFLKLVFKETILVGHSLENDLLSLKI 322

Query: 343 SHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDSVEDARATMELALLKI 402
           SH+LV+DTAVLYKHP G S+K+ LRILAK+FL+REIQ+S +GHDS EDA+A M+LALLKI
Sbjct: 323 SHNLVIDTAVLYKHPHGRSYKTKLRILAKKFLAREIQESESGHDSAEDAKAAMDLALLKI 371

Query: 403 KHG 406
           KHG
Sbjct: 383 KHG 371

[Close]

BLAST of Carg26648 vs. TAIR 10
Match: AT5G05540.1 (small RNA degrading nuclease 2 )

HSP 1 Score: 120.9 bits (302), Expect = 2.3e-27
Identity = 88/282 (31.21%), Postives = 143/282 (50.71%), Query Frame = 0


Query: 138 TFKRFCGSPRPVLALSCISD----RMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFG 197
           T+K F       L  S +SD    R   + A LT  +K+K D     L   L  + ++F 
Sbjct: 31  TWKEFLDFYDKQLGSSSLSDPSKRRKDDLVAFLT-TLKKKEDLQL--LAKSLKLDNDVFE 90

Query: 198 PEKDSPISIKLPKELPFPVTYYTLTAKELE-DNGYPFNQPGFIQT--LPAPMGSSPYEMV 257
             K   +     + L       TLT  E   D  +P N   +++T      M  +  EM+
Sbjct: 91  KFKKKSLDETAEQRL----VRMTLTHDEYPLDYLFPSNAEDWVRTGLGKKKMEPTKIEMI 150

Query: 258 ALDCEMCVTCEGFE-LTRITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTT 317
           A+DCEM +  +G E + R+  VD   +++LD+ VKP+  +VDY T  +G+T + L + T 
Sbjct: 151 AIDCEMVLCEDGSEAVVRVAAVDRDLKVILDEFVKPNQPVVDYRTFITGLTAQDLEKATI 210

Query: 318 SLEDVQKDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSH------K 377
           S+ D+Q+  L  + ++T+LVG SL +DL  LK+ H  V+DT++++K+   G+       +
Sbjct: 211 SVVDIQEKLLMFISEDTILVGQSLNHDLKVLKVDHARVIDTSLVFKYNYDGTRRPLRLKR 270

Query: 378 SALRILAKRFLSREIQQSSNGHDSVEDARATMELALLKIKHG 406
            +L  L K  L  E+Q+    H+ V DA A M+L L  + +G
Sbjct: 271 PSLNYLCKCILGYEVQKEGVPHNCVHDAEAAMKLVLAILDNG 305

[Close]

BLAST of Carg26648 vs. TAIR 10
Match: AT5G05540.2 (small RNA degrading nuclease 2 )

HSP 1 Score: 120.9 bits (302), Expect = 2.3e-27
Identity = 88/282 (31.21%), Postives = 143/282 (50.71%), Query Frame = 0


Query: 138 TFKRFCGSPRPVLALSCISD----RMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFG 197
           T+K F       L  S +SD    R   + A LT  +K+K D     L   L  + ++F 
Sbjct: 31  TWKEFLDFYDKQLGSSSLSDPSKRRKDDLVAFLT-TLKKKEDLQL--LAKSLKLDNDVFE 90

Query: 198 PEKDSPISIKLPKELPFPVTYYTLTAKELE-DNGYPFNQPGFIQT--LPAPMGSSPYEMV 257
             K   +     + L       TLT  E   D  +P N   +++T      M  +  EM+
Sbjct: 91  KFKKKSLDETAEQRL----VRMTLTHDEYPLDYLFPSNAEDWVRTGLGKKKMEPTKIEMI 150

Query: 258 ALDCEMCVTCEGFE-LTRITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTT 317
           A+DCEM +  +G E + R+  VD   +++LD+ VKP+  +VDY T  +G+T + L + T 
Sbjct: 151 AIDCEMVLCEDGSEAVVRVAAVDRDLKVILDEFVKPNQPVVDYRTFITGLTAQDLEKATI 210

Query: 318 SLEDVQKDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSH------K 377
           S+ D+Q+  L  + ++T+LVG SL +DL  LK+ H  V+DT++++K+   G+       +
Sbjct: 211 SVVDIQEKLLMFISEDTILVGQSLNHDLKVLKVDHARVIDTSLVFKYNYDGTRRPLRLKR 270

Query: 378 SALRILAKRFLSREIQQSSNGHDSVEDARATMELALLKIKHG 406
            +L  L K  L  E+Q+    H+ V DA A M+L L  + +G
Sbjct: 271 PSLNYLCKCILGYEVQKEGVPHNCVHDAEAAMKLVLAILDNG 305

[Close]

BLAST of Carg26648 vs. TAIR 10
Match: AT3G50100.1 (small RNA degrading nuclease 1 )

HSP 1 Score: 117.9 bits (294), Expect = 2.0e-26
Identity = 77/235 (32.77%), Postives = 126/235 (53.62%), Query Frame = 0


Query: 173 KRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQP 232
           K  AN + ++N     Q+   PE+   + ++L  E P         +  L+ +  P+++ 
Sbjct: 74  KCHANHLLIENLKQESQDEDTPEQ---MLVRLTVEHP---------SYSLDYSFKPYSED 133

Query: 233 GFIQTLPAPMGS--SPYEMVALDCEMCVTCEGFE-LTRITLVDMAGQIVLDKLVKPSNAI 292
            F+  +   M        MVA+DCEM +  +G E L R+ +VD   +++LD+ VKP+  +
Sbjct: 134 WFVSDVGMKMKKVMESTNMVAVDCEMVLCEDGTEGLVRVGVVDRDLKVILDEFVKPNKPV 193

Query: 293 VDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLVGHSLENDLMALKISHDLVVD 352
           VDY T  +GIT E +   + S+ D+Q+     +   T+LVGHSL  DL  LKI H  V+D
Sbjct: 194 VDYRTDITGITAEDIENASLSVVDIQETLQPFLSTGTILVGHSLNRDLEVLKIDHPKVID 253

Query: 353 TAVLYKHPRGGS-HKSALRILAKRFLSREIQQSSNGHDSVEDARATMELALLKIK 404
           TA+++K+P      + +L  L K  L  E++++   HD V DA A M+LAL  ++
Sbjct: 254 TALVFKYPNTRKLRRPSLNNLCKSILGYEVRKTGVPHDCVHDASAAMKLALAVVE 296

[Close]

BLAST of Carg26648 vs. TAIR 10
Match: AT5G67240.1 (small RNA degrading nuclease 3 )

HSP 1 Score: 112.1 bits (279), Expect = 1.1e-24
Identity = 61/160 (38.12%), Postives = 91/160 (56.88%), Query Frame = 0


Query: 249 MVALDCEMCVTCE--GFELTRITLVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNE 308
           M+++DCEM VTCE     L R+  VD   ++VLDK VKP   ++DY T  +G+T E L  
Sbjct: 145 MLSIDCEM-VTCEDGSQALVRVGAVDRDLKVVLDKFVKPDKPVIDYKTDITGVTAEDLER 204

Query: 309 VTTSLEDVQKDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTAVLYKH-PRGGSHKSA 368
            T S+ D+QK     +   T+LVGH L NDL  L+I H  V+DT+ +++      + + +
Sbjct: 205 ATLSVADIQKKLRRFLSVGTILVGHGLHNDLQVLRIDHARVIDTSYVFEFVDAPKTQRPS 264

Query: 369 LRILAKRFLSREIQQSSNGHDSVEDARATMELALLKIKHG 406
           L  L K  L +E++     H+ V DA A M+L L  ++ G
Sbjct: 265 LNNLCKSVLGQEVRMDGAAHNCVHDAAAAMKLVLAAVEKG 303

The following BLAST results are available for this feature:

BLAST of Carg26648 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025022.1	9.2e-228	100.00	Small RNA degrading nuclease 5 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6592160.1	1.4e-220	97.53	Small RNA degrading nuclease 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023534811.1	1.6e-208	98.94	small RNA degrading nuclease 5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022937364.1	6.2e-208	98.68	small RNA degrading nuclease 5-like [Cucurbita moschata]	[more]
XP_022974960.1	8.9e-207	97.89	small RNA degrading nuclease 5-like [Cucurbita maxima]	[more]

BLAST of Carg26648 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7M4	1.6e-126	63.64	Small RNA degrading nuclease 5 OS=Arabidopsis thaliana OX=3702 GN=SDN5 PE=2 SV=2	[more]
O94443	1.3e-43	34.26	Uncharacterized exonuclease C637.09 OS=Schizosaccharomyces pombe (strain 972 / A...	[more]
P53331	4.0e-40	31.70	RNA exonuclease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=55...	[more]
Q8IX06	6.3e-38	45.16	Putative exonuclease GOR OS=Homo sapiens OX=9606 GN=REXO1L1P PE=5 SV=2	[more]
P48778	1.4e-37	44.62	Exonuclease GOR OS=Pan troglodytes OX=9598 GN=REXO1L1 PE=2 SV=3	[more]

BLAST of Carg26648 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FAZ1	3.0e-208	98.68	small RNA degrading nuclease 5-like OS=Cucurbita moschata OX=3662 GN=LOC11144367...	[more]
A0A6J1IFC2	4.3e-207	97.89	small RNA degrading nuclease 5-like OS=Cucurbita maxima OX=3661 GN=LOC111473789 ...	[more]
A0A6J1J229	1.3e-192	90.21	small RNA degrading nuclease 5-like OS=Cucurbita maxima OX=3661 GN=LOC111480556 ...	[more]
A0A6J1EE80	1.9e-191	89.68	small RNA degrading nuclease 5-like OS=Cucurbita moschata OX=3662 GN=LOC11143338...	[more]
A0A5D3DMF7	3.1e-189	89.68	Small RNA degrading nuclease 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Carg26648 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25800.1	1.2e-127	63.64	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G05540.1	2.3e-27	31.21	small RNA degrading nuclease 2	[more]
AT5G05540.2	2.3e-27	31.21	small RNA degrading nuclease 2	[more]
AT3G50100.1	2.0e-26	32.77	small RNA degrading nuclease 1	[more]
AT5G67240.1	1.1e-24	38.13	small RNA degrading nuclease 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 248..406 e-value: 6.1E-41 score: 152.0
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 250..397 e-value: 1.6E-10 score: 41.8
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 246..406 e-value: 3.1E-55 score: 188.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..59
None	No IPR available	PANTHER	PTHR12801:SF115	LD29573P	coord: 45..406
None	No IPR available	PANTHER	PTHR12801	RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED	coord: 45..406
IPR034922	RNA exonuclease 1-like, exonuclease domain	CDD	cd06145	REX1_like	coord: 250..399 e-value: 6.24862E-93 score: 273.977
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 249..401

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26648-RA	Carg26648-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004527	exonuclease activity
molecular_function	GO:0003676	nucleic acid binding