Carg26613 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg26613
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X1
Location	Carg_Chr15: 6993595 .. 7002596 (+)
RNA-Seq Expression	Carg26613
Synteny	Carg26613

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCGAGGAGGTGGAGGAAGAACGCCAAGAAGGCTCGTTTCGCTGTAATCCCCAGCGGCTGCTCGTCAAATTCTTCCGTTTTTCATTCATATCAAACCTCAATTTCTCAATTCTGCACTCATTTCAGCAGCTCGCCATGTTTCAACCAAACAATATGCAGGCATCTCTCTCTCTCTCTCACCCCTACTTAATCTGTCTGGTTTTTGCGTACTCGTAGACCTAGAATTTGCTTCTGGCTTGTCGGATTTTCCTGTTCCCCTGCATTTTTGTTGTGGCTTTAGTAGAGCAGTAGGTGGCTGTTGTTGTGTGCTTCTGTTTACGATGATTTATGAAGAAATTGGAGTGGAGAGCTTGTTGGGGTTTGATTGTTTCTGAATTTTCCTGAATTTCTCCTCTGTGTTGGTCTCTAATTGTACTCTTTCTGGCAGCTGGCTATTCGGATACCGACATCGCCGGCCCAAGATTCTACGCAGTATATGCAAGTCGATCAGAGCGACAGTTCGTGTGTCGTGAGAAATGATACGCAAAATGGGGGCTTCGCTCATGCGGAATACATCTTCAATTTTTCCAAGGTGTCATCATCATACTCATTTGGGTTTCTTTTTTTTATACAAGTTTGTTTTCGGATTACGGTTGTATGGATAAACAATGCACAAGTGTGGGGAGCATGTTGTAAACTCTCGGTTGACAGTGGTTTGCTTGTATACGCTTAGCTAGTGAATTGCTAGTCTCATGCATCATTGGACTGATTCCTGCAGAAACTTCAAGAGGATCTACAGACGTTCGGAATGAAAATAAAGCAACACGAGGACAACATTAAATTTCTCAAGACTCAGAAAAGCAAATTAGATGAATCCATCCTCGATTTGCAAGGTATTTTATCTATAATTGTTGGGAAGTGAATTTGTTCTTAGATGGAGAAACGTGGGCAATATAACATGCTTGCAATCGTTTGTCATTTACCATCAAGGTGATTGGTCATGGCAAGCATTGCATCAAAAAAGCATATATTAGTTTTGGTGATTTTATTATGTATGGTTTGTGGGGTTTATGTTATATTTCTCACCAAAATATATTACACGTTTAAATTTCAAGCTTGCATGTGGTGATTTTTTTTCCACATTAGATTCTTAGACATGTAGCATTGGTTTTCTCTTCCTCGTACTGTTTGTGTGAGGACTTATAAATATTCCCTTTAGTATCTTTTATCCACTTATATAGTTTTCTTCAGTTATTCTAGGCAAGTATAATCATTCTTCAGGCACGCCTGTGGCTGAAAACGAGATTCATTCCCATCCTCAAAGTGATGAGGAAACGATGCAACAGATTATGCAGCAGGAGAAGTCTGCTGCTGGAATTATTTGTAAATTGAGCGCACATCATAGTATTCAGGCTTACAATATCATGTTGACCAAAGACGTATTGGGCATTGTTGCTCGGCTTGGAAAAGTTGATGATGATAATCTTAGCAGGTCTGCGTTACTTCTACTTTTTTTAATTTTATTTTCCTCCATTTATTTTGAAATGTGGAATTTGTTATGAATCAACTGACGTTCCCTGGCCTTTTCCTCAGGTAATTGTGGGTGGGTGGGATGGGGGTGTTGAGATTGAATTACATCACGTCTGATACATAAAACTGAGCTTTACTGTATGTTTATGCATGTCGTATTGGGCGAGGGTGGTTCACCAGATACTATAGTGGATCCAAATGGATCAGATAGTCTTTTACTTGTTGGTTGTCACATTTTTTTTGAAGTGTAGCTTAAACAATTAGAATGTTTAATGTAATTGGACATCTGAAGGTGGAGGTGGAAGATGAGTGTTCTTTTAGCATAATCTTTGATGTCTGGCCTCTCGTTTAACTATTTTAATTTTCATTGATGTTGTGATAAAAGTTAAAAATGCTGAGGGATACTATATCATTTAAATTTGTTTTTAATGATAGAGAAAAACTTTTGAAGTGGACTACATACTATCTGAAAGCAGAAGTGAGATGAGTACTTGAGCATGTTGCCTTCTGTTCTTCCTGTTATGAAATGTTTGTTATTATAAGAGACAGTCTTATTACATCATCAAACAAACAATATGCATAGTGTTGCACTTACATGATCTTTTTTAATTATTTCAATTGCAGACTTCTCTCTGAGTACTTGGGAATGGAAACCATGCTGGCAATTGTCTGTAGAACTTACGAGGGAGTTAAGGCATTAGAAATATATGACAAGGAAGGTTGCATAAACAAAAGTTTTGGCATTCATGGTCTTGGTGCTTCAATTGGGAGGAACTTGGATGGCCGGTTTCTCGTAATTTGTCTTGAACATTTGAGGCATTAGTCTTATATACTGTATCTGCTTGAAATTCTGTAGCTTAAGTTTGTAAACTTCTTTGGAGGTTTTATTTATCCATGAAAATGCTAAAAGTACCTTTTTTTTATTTTTATTTTATTTTATTTTGCAGACCATATGTTGGCGATTTTATTGCTAATGACCCACAAAGGAGGCTTGACCTTATAAAGCCAAGATTACCTAATGGGGAGTGTCCACCTGGCTTTCTTGGCTTTGCTGTTAATATGATTGATATTGATAGCATGCACATATTTTGTCTCGCAGCCAATGGATATGGTCTCAGGGAGACCCTGTTCTATTCTCTCTTTTCTCGTCTTCAAGTATATAAAACCAGAGCAGACATGCTACAAGCTCTCCCTTGCATTAGTGATGGTGCACTTTCTTTAGATGGAGGGATAATTAAGGCTACTGGTGTTTTTTGCTTGGGCAACCAGTATGAAGCTCTCTTTCAAAATTGTATTTCAATTTTGTCTGAATCATTTAGTAGACCATGCCTTACAGTTTAATCTCTTTTTTATTTTTTAATTTCTTTTGTCAATTAATCTGATTTTTATTTATTTATTTATTTATTTTTTTGCTCAAATGTTTAAGATTCCAAGCGATAATTCTGAAATGTCGTCTATCTTTTTCCAAAAATCCTTCATTCACTACTTTATAATGTGCTTTGGTCTCTTAAATTTACTGAAACAAAAATTGGATTTCTGTTATGGATTGTGGACTTATATTTGTTGTTCACTTAAAAGTTTGGATTTTATCGAGTGCTAATCTCATTTTTTGTATGTTTGATGACAGGGAAGATGTTCAGTTGAGATTCCCAAAGGCTTCAATGAAATCAAGCCTTCCTGAAAACTACATTGAATCTGCGAGGCAGATTAAAGAGCTCAAGTGGAAAAAGGAAAAGATGATTGAAGATATAAAGAGAGAACATGCGTTGTTGGACAATTCTAAGCTCAATTTTGACAGGAAAAAGGCAGAGTTTCTGAAGTTCCTGGCTGAAAGCTCATCATATGCAGCTCAGGTGAGATCTAAAATCCTTTGATTCGGAGATAAGGGTGTAGGCTTAAAATGTTCTTAAACCACAACATTTCAAGTGAAGTATATTGAATTTGTTTCTTTTTTGAGATTTTGACTGTCCTACTTCTCCCTTTTTTTATTCTCTTCTGTTGAGTAAATGTAGCAGTCTATTGAAGTGGTGAACTCAATTATTAATCTTCTATTTTTTATATTCTTTTTACCTCTACAAATTCATTCATTGAAAAAAAGGCGGTGGAAGGGGAATCCCTTGCCCAACTAGAGCTTACAGAAACACCCCAATCAAGATTGGGGAGAAAAACTTGTAAAATTGCAAAGAAAAACTCCTGATGACCTCTCTTCCTTCCCTTCGTCTCAATGTAGTACCCCCTTTAACATACTCTCTGATTATTAGTTTCGGCTGCAATGGCATTAATCCTCAATCATCGAACCTCCAGAGTTACTCCAACCAATCCATTTCCATTGATAGAAAATATTTTACCATCACTTTTGACAAACACTAGCGAGGAGAACGAGCAAACATCGTGGAAAGTAGTCATACCTTCACCCAATCAATCTCACTGTCTAGGAATTCCCTTCAATGGCTTGGATCCTCCTTTGATACTATGGTGCATCAACTCTGTTCCTTCTAATTCCTCAAAGAACTTCGAGGTTACAATTATTTCCTCGAAGTGAAGGAACAAAGTTGGATACTTTGTTGAATTGATCCAGATTGACCAAAATGGAAACAGAAAACGTCTTTAATAGTTTCTCTAGATCTATCCATCTTTGGTAAAAAAGACTTTATCTCTTATCTGAACCCAAGTGAAAATCTACGAAAAGCCCCACCGACCTAGTTTCTCTAGACCTATCCATCTTTGAGGAACCTCATCCTTTACCCATCAACCCAATGCATCCTCCCTAATACAACTAGTAGACCCTCAACTGATGATGGTTTCACTTGAAATTGTTTGTACTTCTACCCATGTCGCTGGAGACCCAACCCCTATTATTGCACCACCCCATTTTAACCTCCCCACTTCACTTTGCATCTATAACCCTTCTCACTAAACATGGGTTGTGTATTATTTCTATCCTTCCCTAAAATACCAACAAAATAATTCAATCAAAGCCACTCATAAGTGATAACCTAGATTATCCCTCCCAGGTCATCAGTCATAATCTTAGTAGGTTAAGACTTGGATAGCTCCTCAATGCTAAAATAGTCTTACTTCTAGTTCAGTTAACCCATTTGAGCTCATAATAGGATTTTTATTCTCTGGTTACACTCTATCAAGCTCCTTTGTGTCTATCTCAATCATTAGATTTACGTGACCTGACTCCTCTAAGTTTATCTTGATGATTAGGTTCTCTCATGCATGTAGAAAAATTCACCATAGGTTCTATACGCCCCAATATTTCAAAAGGACCTATGAAGTTCGGGTTCAACTTTCCTTTCTTACCAAATCTTAGCACTCCTTTCATGGACACTAACTTTAAGAACATGAGATCACCCACCATAAATTTCAAATCTTTATTTCTGGCATCAACATAGCTCTTTTTTCTGCTCTGCATTGTCAACTTTCTTGTCTTGATTTTCTGCACTGCCTTCTTTGTGATCTAGACTAACTTAGGTTCCAATCGTTAATGTTGTCCACTTCATCCCATAATATTGGGATCAACATCTCTTACCCTATAAATCTTCAAATGCTGCCATCTATATTGTTGCCTACAATTGTTGTTATAGGAAAATTCAATCAAATAGGGGCGTGTGTCCTAGTTAGCTACGTACAAAATCTAACGCACAAGCCAATAGCATATCCTCAATAATCTATGTCTTTTAGCCTATCCATGAGTTGAGGATGAAAATTGTGCTAAAATTCAGCTCAGTTCCCAACGCTCTTTGCTAACTCCAAAAGTTGGACATAAAACAGGTGTCTTTGTCTTATACAATGGACATAGTCACGTCATGCAACCTATCTCTTCCACATACAACTGTGCTCATTTATCAACTGAATATACAAGTTTTCCATTATAATGTGCTGACTTGGTCAATTCAACAATGACCTTAATTACTGAAATCTTTCAGGGGTTGCAAGAAACTTGAGGGTCTCACCTCGGTGCTTTGACTTGTTGACATACTAAGCATCTACTCGCATGCTCAATTATTAGTATGATTTCAAATACTGGTACATCTTTATACTACTAGGGTATATCAAGTTAGGAGAGTCATGAGCTTCAGATGGTACTTCTTGCTTGAGCTCATCATCATTAGAAATGTACAAATGTTTGTGCCAAAGGAAACCGTTATTGGACATTATAGAAAACCTTTTTTCCTCATTTGTTCTACCTGTTGCAATACTCGAGAGAAGTAGGGATTGTTCTTTTGAGAATCAACAAGTCATTGTCTTAGGTAGACTAGAGAATTAATTGTCTACTGTGCTGCTTCACCTCTAACCATAACAACAATGCCAACTCTCTCCAGGTCAACTTGTTTTGTAATTGAAGCTGACATATGAGCAGTCTTTTACTAAGCGCATTGGTAACCATTTGCTTTACCTGAATGATGAAGTATTTCAACATCATAATTTTTAACCAACTTCAACCACCTTTGTTACATTGTGTTTAACGTTTTCTATGTAAATAAATACTTTAAGCTTTTGTGGTTTGTATAGGTTTGAATCTTCTCCTTCTACAAATAATGTATCCATGTCTTTAGTGCAAAGGCCACCGTTGCCAACTCCACATCATGAGTTGGTTAGTTAAGCTCATAATCCTTTCATTGACAGGAGACATAAATGATAACCTTATCATGCTACATCGACAAAATTTTGGTCTCGTCTGGCACAGTTAGTATTGGTGACATAACTAACTAGTCTCTCCTTTAGCTCCTTTAGCTCCTTTCACAAGCTTTGTTCCATATAAATAAATTCCTCTTAAGGTTTGTTCTTGGCTTGAGCTCAATACTAAAATTTACTTCTCGAACCGGAGGTAAACCCTGACAAATTATCCTGAAAGATATTCAGGAACTCATTCATAACTGATGTTCATACTCCTGGTGTCAACTATATTGGCTAACCAACCCCATTCTCCAAGGCTTATAAACTTTGTGACCTTTAGTGTTGAAATAACTTTATGGGTGTCCTCAAACTCAAATCCCCTAAATTTAAATCTCACTCCTACTTCTCTGGCGTAGCAATTAATGTTGGCGTGGTCCTCAACTAACCAATCCATGCCAAGAACAACTAAAAGTTTGTCATGTCCATAAAAGAGTGGGTAGACACAATCTTATAAAAGAAGAGCATGGTGACCAAATATAGGGAATGTACCTGTCACCAATGTATTCACGTTCTCAGCTCCTCTGCTAGTCATCGCATGAGTCATGCCTCTTCCTCGGGTCTGACCTCATCTTCCTCTCTGGTTTGATCCTGACAGTTGGTTTGAATTATGATTTACCTCATTTGGGAAATTTGCAACCAAAACAAGCACCAGCTCCCGTCATACTAAATCCCTCATGGACACATCCACACACTCTACATGGAAGCCTCCCAACATTAGGGTTGGTTGTCTATCAGATTGTTGTTGCTGTGATGGCTGTTGAGTTCTAGGAAAAGCTCGATTTAATCTTCTCTTATTCCTTGGATCTCCCTGCCCACCAGATGTATGAGATGCCGTATGAGTATACATATCCATCATCATAGTCTCTCGAAGAGCTGCAACATAATCTGATGGAGCTAGAGCTTCAACTGTGCCTTGAATCTCATTCCTTAGATCCATTATGAACCTCTTGCTTTCTTCGTTAGTATCTACAAGTTCAGGAGCAAAGCAAGCTAATGAGTAATACTTCAACAGTTTTCTCTCCCTGTTTCAAATTCAAGCATTTTTCCTGCCTCCGATATCATAGGAATTGGTTACTGGTATCACTGTTGTCATTTGGCAAGAGAACTTAGAGGCTTTCACTTTTGCTCTGTCAGGGTTGTACCATTTGCCCACCTCTTATATTGAATGTTAAAATTACATTTCAATAATCACTCTTTTTGGATCTTGTGGTGATCTAACTACCAAGCACCTTAATGATTTGAATGTTCATCTGTTTTTCGTATTAATTTGAAACCTTGAGCTATTTCACAAATTAGTTAAAGACTAAAATATGCTTATGGAACTCAAACTAACATCAAGCTGTTGAGAATTGAGACAGTTTGCTTCTCGATAGTTTTCTCTCCCTGATTCAAATTCAAGAATTTTTCCTGCCACCGATATTAGATGACAGTTGGGTAGTACTTCTAGAAGATTTCTTTGAATTCAAACCAAGTAATCAGTCCTTATTGATATCCATTAACTGCTTTGCCGATTCCCACCAGAAGTGGGCATCACCTTTTAGCATCAAGGTTGCATAGTGGACCTTTCAGCATTTCTTTTTTCCTCTTGCCGAGATTAAATTTACTTGTATTACCCTCAGCTCTGCCCATTCACAATTCAATTTTGTTTGTATAATTATTTGTAGCTCTAAAATCTCTATGATTGAGCGATGTGAATCTTTTATGCGGAATTCAATCTTATGTCCTGACATTTATAAATATCAACTTTGATGTCAGCATGTTGTTAAACTTGTGTATGCCGCTAGTGGCCTGTTAAAGTAGTATGACTTCTCAACGAACTCAACAAAATCTGAGAATCAACAAAGATACAGATCACAAGAGTCTTGTTTTAGCTTATGATAATATAATATATGTTAATTACCTTCTTAGTTTTTTTGTTGTATCTATTTAGTTTTTAAGCATGCTCACGAACTTGCATTTGTGATTCTATGTAGTTTTATCATTTAGACATCACGTCTCAAAATATAATGATGGTATGCAACATTCTTGCTTTATGCGGCTATACTGTCATTTGTCTTTGCCATATGTCTGCCACGTCCTTTCAAACTAGTCAATCCATGGCCAATAAATATACTTCTATCATTTAGTTAATGTCAAATAATTCATGAAATCATAATTCGAAGTTTCAAGGATTTAATGGAAACTTTTAAAACTTCAGAGACTAAATAAATATCATCATAGAGAAGATTCTGGATTTGTGTGCCTGCTGTTTGAAGCCTGATATACTGACTGCTTATAGTTCAAACTTTGTTTTAACAGTGGTGTAATTCTGAATGTTATTTTGATGGTGAAATTACAGCAACAACTCTCAGCCAAGCCGGAGAGGTTGACGCCACGGTGAAATTTGCAGTAGAGGACCGAGTCTTCCACCGAGCAACTTGGGGGTGGAACTGTGAGAGCAGTCAGCTGCAATATTAACTCTGGGAAAATGCATAAGCTTCATATTGCATTTTCAGGTAAATATCTTATGGTTTAGCTTTAAATTTTCATGGAAATGGAGTAGGCAGTAGCATGACATCTGTTGTTCCTCACTGGAATAGGCATTCTTTAGTGCTTGCTGTCTAAATTTATTGAAACTAGTGTTCCTAACAGCAGAGACAACGGGGTTCTCTTGCCCTGCAGTGGGTTTAGATGGGATGGCTGTTTGTATTGGTCACCTTTGTCTTATCACACTAAAAATTAAAAATTTAAAAAGGAGAAAGAAAAAATATCGTTTATTTGTGTTGTATGAGTGATTGTTTTCATATATGTGTGTGTGTGTATATATA

mRNA sequence

AGCGAGGAGGTGGAGGAAGAACGCCAAGAAGGCTCGTTTCGCTGTAATCCCCAGCGGCTGCTCGTCAAATTCTTCCGTTTTTCATTCATATCAAACCTCAATTTCTCAATTCTGCACTCATTTCAGCAGCTCGCCATGTTTCAACCAAACAATATGCAGCTGGCTATTCGGATACCGACATCGCCGGCCCAAGATTCTACGCAGTATATGCAAGTCGATCAGAGCGACAGTTCGTGTGTCGTGAGAAATGATACGCAAAATGGGGGCTTCGCTCATGCGGAATACATCTTCAATTTTTCCAAGAAACTTCAAGAGGATCTACAGACGTTCGGAATGAAAATAAAGCAACACGAGGACAACATTAAATTTCTCAAGACTCAGAAAAGCAAATTAGATGAATCCATCCTCGATTTGCAAGTTATTCTAGGCAAGTATAATCATTCTTCAGGCACGCCTGTGGCTGAAAACGAGATTCATTCCCATCCTCAAAGTGATGAGGAAACGATGCAACAGATTATGCAGCAGGAGAAGTCTGCTGCTGGAATTATTTGTAAATTGAGCGCACATCATAGTATTCAGGCTTACAATATCATGTTGACCAAAGACGTATTGGGCATTGTTGCTCGGCTTGGAAAAGTTGATGATGATAATCTTAGCAGACTTCTCTCTGAGTACTTGGGAATGGAAACCATGCTGGCAATTGTCTGTAGAACTTACGAGGGAGTTAAGGCATTAGAAATATATGACAAGGAAGGTTGCATAAACAAAAGTTTTGGCATTCATGGTCTTGGTGCTTCAATTGGGAGGAACTTGGATGGCCGACCATATGTTGGCGATTTTATTGCTAATGACCCACAAAGGAGGCTTGACCTTATAAAGCCAAGATTACCTAATGGGGAGTGTCCACCTGGCTTTCTTGGCTTTGCTGTTAATATGATTGATATTGATAGCATGCACATATTTTGTCTCGCAGCCAATGGATATGGTCTCAGGGAGACCCTGTTCTATTCTCTCTTTTCTCGTCTTCAAGTATATAAAACCAGAGCAGACATGCTACAAGCTCTCCCTTGCATTAGTGATGGTGCACTTTCTTTAGATGGAGGGATAATTAAGGCTACTGGTGTTTTTTGCTTGGGCAACCAGGAAGATGTTCAGTTGAGATTCCCAAAGGCTTCAATGAAATCAAGCCTTCCTGAAAACTACATTGAATCTGCGAGGCAGATTAAAGAGCTCAAGTGGAAAAAGGAAAAGATGATTGAAGATATAAAGAGAGAACATGCGTTGTTGGACAATTCTAAGCTCAATTTTGACAGGAAAAAGGCAGAGTTTCTGAAGTTCCTGGCTGAAAGCTCATCATATGCAGCTCAGCAACAACTCTCAGCCAAGCCGGAGAGGTTGACGCCACGGTGAAATTTGCAGTAGAGGACCGAGTCTTCCACCGAGCAACTTGGGGGTGGAACTGTGAGAGCAGTCAGCTGCAATATTAACTCTGGGAAAATGCATAAGCTTCATATTGCATTTTCAGGTAAATATCTTATGGTTTAGCTTTAAATTTTCATGGAAATGGAGTAGGCAGTAGCATGACATCTGTTGTTCCTCACTGGAATAGGCATTCTTTAGTGCTTGCTGTCTAAATTTATTGAAACTAGTGTTCCTAACAGCAGAGACAACGGGGTTCTCTTGCCCTGCAGTGGGTTTAGATGGGATGGCTGTTTGTATTGGTCACCTTTGTCTTATCACACTAAAAATTAAAAATTTAAAAAGGAGAAAGAAAAAATATCGTTTATTTGTGTTGTATGAGTGATTGTTTTCATATATGTGTGTGTGTGTATATATA

Coding sequence (CDS)

AGCGAGGAGGTGGAGGAAGAACGCCAAGAAGGCTCGTTTCGCTGTAATCCCCAGCGGCTGCTCGTCAAATTCTTCCGTTTTTCATTCATATCAAACCTCAATTTCTCAATTCTGCACTCATTTCAGCAGCTCGCCATGTTTCAACCAAACAATATGCAGCTGGCTATTCGGATACCGACATCGCCGGCCCAAGATTCTACGCAGTATATGCAAGTCGATCAGAGCGACAGTTCGTGTGTCGTGAGAAATGATACGCAAAATGGGGGCTTCGCTCATGCGGAATACATCTTCAATTTTTCCAAGAAACTTCAAGAGGATCTACAGACGTTCGGAATGAAAATAAAGCAACACGAGGACAACATTAAATTTCTCAAGACTCAGAAAAGCAAATTAGATGAATCCATCCTCGATTTGCAAGTTATTCTAGGCAAGTATAATCATTCTTCAGGCACGCCTGTGGCTGAAAACGAGATTCATTCCCATCCTCAAAGTGATGAGGAAACGATGCAACAGATTATGCAGCAGGAGAAGTCTGCTGCTGGAATTATTTGTAAATTGAGCGCACATCATAGTATTCAGGCTTACAATATCATGTTGACCAAAGACGTATTGGGCATTGTTGCTCGGCTTGGAAAAGTTGATGATGATAATCTTAGCAGACTTCTCTCTGAGTACTTGGGAATGGAAACCATGCTGGCAATTGTCTGTAGAACTTACGAGGGAGTTAAGGCATTAGAAATATATGACAAGGAAGGTTGCATAAACAAAAGTTTTGGCATTCATGGTCTTGGTGCTTCAATTGGGAGGAACTTGGATGGCCGACCATATGTTGGCGATTTTATTGCTAATGACCCACAAAGGAGGCTTGACCTTATAAAGCCAAGATTACCTAATGGGGAGTGTCCACCTGGCTTTCTTGGCTTTGCTGTTAATATGATTGATATTGATAGCATGCACATATTTTGTCTCGCAGCCAATGGATATGGTCTCAGGGAGACCCTGTTCTATTCTCTCTTTTCTCGTCTTCAAGTATATAAAACCAGAGCAGACATGCTACAAGCTCTCCCTTGCATTAGTGATGGTGCACTTTCTTTAGATGGAGGGATAATTAAGGCTACTGGTGTTTTTTGCTTGGGCAACCAGGAAGATGTTCAGTTGAGATTCCCAAAGGCTTCAATGAAATCAAGCCTTCCTGAAAACTACATTGAATCTGCGAGGCAGATTAAAGAGCTCAAGTGGAAAAAGGAAAAGATGATTGAAGATATAAAGAGAGAACATGCGTTGTTGGACAATTCTAAGCTCAATTTTGACAGGAAAAAGGCAGAGTTTCTGAAGTTCCTGGCTGAAAGCTCATCATATGCAGCTCAGCAACAACTCTCAGCCAAGCCGGAGAGGTTGACGCCACGGTGA

Protein sequence

SEEVEEERQEGSFRCNPQRLLVKFFRFSFISNLNFSILHSFQQLAMFQPNNMQLAIRIPTSPAQDSTQYMQVDQSDSSCVVRNDTQNGGFAHAEYIFNFSKKLQEDLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSDEETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEYLGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDGRPYVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLFYSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAAQQQLSAKPERLTPR

Homology

[Close]

BLAST of Carg26613 vs. NCBI nr
Match: KAG7016820.1 (Protein DEFECTIVE IN MERISTEM SILENCING 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 925.6 bits (2391), Expect = 1.7e-265
Identity = 469/469 (100.00%), Postives = 469/469 (100.00%), Query Frame = 0


Query: 1   SEEVEEERQEGSFRCNPQRLLVKFFRFSFISNLNFSILHSFQQLAMFQPNNMQLAIRIPT 60
           SEEVEEERQEGSFRCNPQRLLVKFFRFSFISNLNFSILHSFQQLAMFQPNNMQLAIRIPT
Sbjct: 1   SEEVEEERQEGSFRCNPQRLLVKFFRFSFISNLNFSILHSFQQLAMFQPNNMQLAIRIPT 60

Query: 61  SPAQDSTQYMQVDQSDSSCVVRNDTQNGGFAHAEYIFNFSKKLQEDLQTFGMKIKQHEDN 120
           SPAQDSTQYMQVDQSDSSCVVRNDTQNGGFAHAEYIFNFSKKLQEDLQTFGMKIKQHEDN
Sbjct: 61  SPAQDSTQYMQVDQSDSSCVVRNDTQNGGFAHAEYIFNFSKKLQEDLQTFGMKIKQHEDN 120

Query: 121 IKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSDEETMQQIMQQEKSAA 180
           IKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSDEETMQQIMQQEKSAA
Sbjct: 121 IKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSDEETMQQIMQQEKSAA 180

Query: 181 GIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEYLGMETMLAIVCRTYE 240
           GIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEYLGMETMLAIVCRTYE
Sbjct: 181 GIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEYLGMETMLAIVCRTYE 240

Query: 241 GVKALEIYDKEGCINKSFGIHGLGASIGRNLDGRPYVGDFIANDPQRRLDLIKPRLPNGE 300
           GVKALEIYDKEGCINKSFGIHGLGASIGRNLDGRPYVGDFIANDPQRRLDLIKPRLPNGE
Sbjct: 241 GVKALEIYDKEGCINKSFGIHGLGASIGRNLDGRPYVGDFIANDPQRRLDLIKPRLPNGE 300

Query: 301 CPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLFYSLFSRLQVYKTRADMLQALPCISD 360
           CPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLFYSLFSRLQVYKTRADMLQALPCISD
Sbjct: 301 CPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLFYSLFSRLQVYKTRADMLQALPCISD 360

Query: 361 GALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESARQIKELKWKKEKMIE 420
           GALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESARQIKELKWKKEKMIE
Sbjct: 361 GALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESARQIKELKWKKEKMIE 420

Query: 421 DIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAAQQQLSAKPERLTPR 470
           DIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAAQQQLSAKPERLTPR
Sbjct: 421 DIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAAQQQLSAKPERLTPR 469

[Close]

BLAST of Carg26613 vs. NCBI nr
Match: KAG6579318.1 (Protein DEFECTIVE IN MERISTEM SILENCING 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 917.5 bits (2370), Expect = 4.6e-263
Identity = 469/479 (97.91%), Postives = 469/479 (97.91%), Query Frame = 0


Query: 1   SEEVEEERQEGSFRCNPQRLLVKFFRFSFISNLNFSILHSFQQLAMFQPNNMQLAIRIPT 60
           SEEVEEERQEGSFRCNPQRLLVKFFRFSFISNLNFSILHSFQQLAMFQPNNMQLAIRIPT
Sbjct: 385 SEEVEEERQEGSFRCNPQRLLVKFFRFSFISNLNFSILHSFQQLAMFQPNNMQLAIRIPT 444

Query: 61  SPAQDSTQYMQVDQSDSSCVVRNDTQNGGFAHAEYIFNFSKKLQEDLQTFGMKIKQHEDN 120
           SPAQDSTQYMQVDQSDSSCVVRNDTQNGGFAHAEYIFNFSKKLQEDLQTFGMKIKQHEDN
Sbjct: 445 SPAQDSTQYMQVDQSDSSCVVRNDTQNGGFAHAEYIFNFSKKLQEDLQTFGMKIKQHEDN 504

Query: 121 IKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSDEETMQQIMQQEKSAA 180
           IKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSDEETMQQIMQQEKSAA
Sbjct: 505 IKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSDEETMQQIMQQEKSAA 564

Query: 181 GIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEYLGMETMLAIVCRTYE 240
           GIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEYLGMETMLAIVCRTYE
Sbjct: 565 GIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEYLGMETMLAIVCRTYE 624

Query: 241 GVKALEIYDKEGCINKSFGIHGLGASIGRNLDG----------RPYVGDFIANDPQRRLD 300
           GVKALEIYDKEGCINKSFGIHGLGASIGRNLDG          RPYVGDFIANDPQRRLD
Sbjct: 625 GVKALEIYDKEGCINKSFGIHGLGASIGRNLDGRFLVICLEHLRPYVGDFIANDPQRRLD 684

Query: 301 LIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLFYSLFSRLQVYKTRAD 360
           LIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLFYSLFSRLQVYKTRAD
Sbjct: 685 LIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLFYSLFSRLQVYKTRAD 744

Query: 361 MLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESARQIKE 420
           MLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESARQIKE
Sbjct: 745 MLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESARQIKE 804

Query: 421 LKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAAQQQLSAKPERLTPR 470
           LKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAAQQQLSAKPERLTPR
Sbjct: 805 LKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAAQQQLSAKPERLTPR 863

[Close]

BLAST of Carg26613 vs. NCBI nr
Match: XP_022922277.1 (protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 829.3 bits (2141), Expect = 1.6e-236
Identity = 422/434 (97.24%), Postives = 422/434 (97.24%), Query Frame = 0


Query: 46  MFQPNNMQLAIRIPTSPAQDSTQYMQVDQSDSSCVVRNDTQNGGFAHAEYIFNFSKKLQE 105
           MF PNNMQLAIRIPTSP QDSTQYMQVDQSDSSCVVRNDTQNGGFAHAEYIFNFSKKLQE
Sbjct: 1   MFHPNNMQLAIRIPTSPTQDSTQYMQVDQSDSSCVVRNDTQNGGFAHAEYIFNFSKKLQE 60

Query: 106 DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSD 165
           DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSD
Sbjct: 61  DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSD 120

Query: 166 EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY 225
           EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY
Sbjct: 121 EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY 180

Query: 226 LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDG----------RP 285
           LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDG          RP
Sbjct: 181 LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDGRFLVICLEHLRP 240

Query: 286 YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF 345
           YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF
Sbjct: 241 YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF 300

Query: 346 YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS 405
           YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS
Sbjct: 301 YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS 360

Query: 406 SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA 465
           SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA
Sbjct: 361 SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA 420

Query: 466 QQQLSAKPERLTPR 470
           QQQLSAKPERLTPR
Sbjct: 421 QQQLSAKPERLTPR 434

[Close]

BLAST of Carg26613 vs. NCBI nr
Match: XP_023551081.1 (protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 829.3 bits (2141), Expect = 1.6e-236
Identity = 422/434 (97.24%), Postives = 422/434 (97.24%), Query Frame = 0


Query: 46  MFQPNNMQLAIRIPTSPAQDSTQYMQVDQSDSSCVVRNDTQNGGFAHAEYIFNFSKKLQE 105
           MF PNNMQLAIRIPTSPAQDSTQYMQVDQSDSSCV RNDTQNGGFAHAEYIFNFSKKLQE
Sbjct: 1   MFHPNNMQLAIRIPTSPAQDSTQYMQVDQSDSSCVARNDTQNGGFAHAEYIFNFSKKLQE 60

Query: 106 DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSD 165
           DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSD
Sbjct: 61  DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSD 120

Query: 166 EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY 225
           EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY
Sbjct: 121 EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY 180

Query: 226 LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDG----------RP 285
           LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDG          RP
Sbjct: 181 LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDGRFLVICLEHLRP 240

Query: 286 YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF 345
           YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF
Sbjct: 241 YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF 300

Query: 346 YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS 405
           YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS
Sbjct: 301 YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS 360

Query: 406 SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA 465
           SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA
Sbjct: 361 SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA 420

Query: 466 QQQLSAKPERLTPR 470
           QQQLSAKPERLTPR
Sbjct: 421 QQQLSAKPERLTPR 434

[Close]

BLAST of Carg26613 vs. NCBI nr
Match: XP_022972950.1 (protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 823.5 bits (2126), Expect = 8.9e-235
Identity = 420/434 (96.77%), Postives = 421/434 (97.00%), Query Frame = 0


Query: 46  MFQPNNMQLAIRIPTSPAQDSTQYMQVDQSDSSCVVRNDTQNGGFAHAEYIFNFSKKLQE 105
           MF  NNMQLAIRIPTSPAQDSTQYMQVDQSDSSCVVRND QNGGFAHAEYIFNFSKKLQE
Sbjct: 1   MFHSNNMQLAIRIPTSPAQDSTQYMQVDQSDSSCVVRNDMQNGGFAHAEYIFNFSKKLQE 60

Query: 106 DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSD 165
           DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKY+HSSGTPVAENEIHSHPQSD
Sbjct: 61  DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKYHHSSGTPVAENEIHSHPQSD 120

Query: 166 EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY 225
           EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY
Sbjct: 121 EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY 180

Query: 226 LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDG----------RP 285
           LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDG          RP
Sbjct: 181 LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDGRFLVICLEHLRP 240

Query: 286 YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF 345
           YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF
Sbjct: 241 YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF 300

Query: 346 YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS 405
           YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS
Sbjct: 301 YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS 360

Query: 406 SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA 465
           SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA
Sbjct: 361 SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA 420

Query: 466 QQQLSAKPERLTPR 470
           QQQLSAKPERLTPR
Sbjct: 421 QQQLSAKPERLTPR 434

[Close]

BLAST of Carg26613 vs. ExPASy Swiss-Prot
Match: Q94A79 (Protein DEFECTIVE IN MERISTEM SILENCING 3 OS=Arabidopsis thaliana OX=3702 GN=DMS3 PE=1 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 3.6e-122
Identity = 231/414 (55.80%), Postives = 303/414 (73.19%), Query Frame = 0


Query: 49  PNNMQLAIRIPTSPAQDSTQYMQVDQSDSSCVVRNDTQN-GGFAHAEYIFNFSKKLQEDL 108
           P   Q++ +      QD T+ M +DQ  SS V RN+TQN GG AHAE+    SK+L+ DL
Sbjct: 3   PTGQQISFQTTPLNVQDPTRMMNLDQ--SSPVARNETQNGGGIAHAEFAMFNSKRLESDL 62

Query: 109 QTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSDEE 168
           +  G KIKQHEDN+KFLK+QK+K+DE+I+DLQV + K N SS TP +EN  +S     E+
Sbjct: 63  EAMGNKIKQHEDNLKFLKSQKNKMDEAIVDLQVHMSKLN-SSPTPRSENSDNS--LQGED 122

Query: 169 TMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEYLG 228
              QI++ E SAAG++  +   H  QA  +MLTK V+G+VA+LGKV+D+NLS++LS YLG
Sbjct: 123 INAQILRHENSAAGVLSLVETLHGAQASQLMLTKGVVGVVAKLGKVNDENLSQILSNYLG 182

Query: 229 METMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDG----------RPYV 288
             +MLA+VCR YE V ALE YD  G I+ + G+H LG+SIGR +            RPYV
Sbjct: 183 TRSMLAVVCRNYESVTALEAYDNHGNIDINAGLHCLGSSIGREIGDSFDAICLENLRPYV 242

Query: 289 GDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLFYS 348
           G  IA+D QRRLDL+KP+LPNGECPPGFLGFAVNMI ID  ++ C+ + GYGLRETLFY+
Sbjct: 243 GQHIADDLQRRLDLLKPKLPNGECPPGFLGFAVNMIQIDPAYLLCVTSYGYGLRETLFYN 302

Query: 349 LFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKSSL 408
           LFSRLQVYKTRADM+ ALPCISDGA+SLDGGII+ TG+F LGN+++V +RF K +   ++
Sbjct: 303 LFSRLQVYKTRADMISALPCISDGAVSLDGGIIRKTGIFNLGNRDEVNVRFAKPTASRTM 362

Query: 409 PENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESS 452
            +NY E+ +++KELKWKKEK +EDIKRE  L +++  NF +KK EF++ LA+SS
Sbjct: 363 -DNYSEAEKKMKELKWKKEKTLEDIKREQVLREHAVFNFGKKKEEFVRCLAQSS 410

[Close]

BLAST of Carg26613 vs. ExPASy Swiss-Prot
Match: F4KFS5 (Structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 OS=Arabidopsis thaliana OX=3702 GN=GMI1 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 5.4e-33
Identity = 112/366 (30.60%), Postives = 177/366 (48.36%), Query Frame = 0


Query: 99   FSKKLQEDLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEI 158
            +++ L+E +     +  + E+ +K L+ Q+   ++    LQ  L       G P  E   
Sbjct: 1257 YTEDLKEKINIDEERRVELEERLKCLQAQREHAEQECSRLQASL----EPLGAPFPE--- 1316

Query: 159  HSHPQSDEETMQQIMQQ-EKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDN 218
                 + E  M+QI ++   +AA + C L           +  K + G+VA LG V   +
Sbjct: 1317 --CLSTKESMMKQIEEKHHDTAASVFCCLYRKAPPPRSLFLSQKGMFGVVALLGSVASTS 1376

Query: 219  LSRLLSEYLGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDG---- 278
            LSR+LSEYLG +TML++VC++ +     + Y K              AS+GR++      
Sbjct: 1377 LSRVLSEYLGKDTMLSLVCKSSQFGPKSDEYRK---------FQSEAASLGRSITNRFLV 1436

Query: 279  ------RPYVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANG 338
                  RP+    + NDPQ+RL +  P LPNG+  PGF G+AVNMID+ S  +   +++G
Sbjct: 1437 ICLDATRPWRNGLVRNDPQKRLAMDNPYLPNGDPIPGFKGYAVNMIDLASEELDIQSSSG 1496

Query: 339  YGLRETLFYSLFSRLQVYKTRADMLQALPCISDG-ALSLDGGIIKATGVFCLGNQEDVQL 398
            YGLRETLFY +F  LQVY+T   +  ALP I+ G A+SLDG I +  G    G       
Sbjct: 1497 YGLRETLFYGVFRELQVYETAEHLEAALPHINGGDAVSLDGVIARENGFIYSG------C 1556

Query: 399  RFPKASMKSSLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKF 453
              P+     ++ E   ++  Q++  + KK K  E +  E+  L        +   ++  F
Sbjct: 1557 CTPEVHFPITVTERQEKALVQLEITRDKKRKTEEMMTEENRSLRRLVKKLKKANEKYQNF 1598

[Close]

BLAST of Carg26613 vs. ExPASy TrEMBL
Match: A0A6J1E2T2 (protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430306 PE=4 SV=1)

HSP 1 Score: 829.3 bits (2141), Expect = 7.9e-237
Identity = 422/434 (97.24%), Postives = 422/434 (97.24%), Query Frame = 0


Query: 46  MFQPNNMQLAIRIPTSPAQDSTQYMQVDQSDSSCVVRNDTQNGGFAHAEYIFNFSKKLQE 105
           MF PNNMQLAIRIPTSP QDSTQYMQVDQSDSSCVVRNDTQNGGFAHAEYIFNFSKKLQE
Sbjct: 1   MFHPNNMQLAIRIPTSPTQDSTQYMQVDQSDSSCVVRNDTQNGGFAHAEYIFNFSKKLQE 60

Query: 106 DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSD 165
           DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSD
Sbjct: 61  DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSD 120

Query: 166 EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY 225
           EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY
Sbjct: 121 EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY 180

Query: 226 LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDG----------RP 285
           LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDG          RP
Sbjct: 181 LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDGRFLVICLEHLRP 240

Query: 286 YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF 345
           YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF
Sbjct: 241 YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF 300

Query: 346 YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS 405
           YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS
Sbjct: 301 YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS 360

Query: 406 SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA 465
           SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA
Sbjct: 361 SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA 420

Query: 466 QQQLSAKPERLTPR 470
           QQQLSAKPERLTPR
Sbjct: 421 QQQLSAKPERLTPR 434

[Close]

BLAST of Carg26613 vs. ExPASy TrEMBL
Match: A0A6J1IA28 (protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471470 PE=4 SV=1)

HSP 1 Score: 823.5 bits (2126), Expect = 4.3e-235
Identity = 420/434 (96.77%), Postives = 421/434 (97.00%), Query Frame = 0


Query: 46  MFQPNNMQLAIRIPTSPAQDSTQYMQVDQSDSSCVVRNDTQNGGFAHAEYIFNFSKKLQE 105
           MF  NNMQLAIRIPTSPAQDSTQYMQVDQSDSSCVVRND QNGGFAHAEYIFNFSKKLQE
Sbjct: 1   MFHSNNMQLAIRIPTSPAQDSTQYMQVDQSDSSCVVRNDMQNGGFAHAEYIFNFSKKLQE 60

Query: 106 DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSD 165
           DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKY+HSSGTPVAENEIHSHPQSD
Sbjct: 61  DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKYHHSSGTPVAENEIHSHPQSD 120

Query: 166 EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY 225
           EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY
Sbjct: 121 EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY 180

Query: 226 LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDG----------RP 285
           LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDG          RP
Sbjct: 181 LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDGRFLVICLEHLRP 240

Query: 286 YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF 345
           YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF
Sbjct: 241 YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF 300

Query: 346 YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS 405
           YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS
Sbjct: 301 YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS 360

Query: 406 SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA 465
           SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA
Sbjct: 361 SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA 420

Query: 466 QQQLSAKPERLTPR 470
           QQQLSAKPERLTPR
Sbjct: 421 QQQLSAKPERLTPR 434

[Close]

BLAST of Carg26613 vs. ExPASy TrEMBL
Match: A0A6J1E648 (protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430306 PE=4 SV=1)

HSP 1 Score: 818.9 bits (2114), Expect = 1.1e-233
Identity = 419/434 (96.54%), Postives = 419/434 (96.54%), Query Frame = 0


Query: 46  MFQPNNMQLAIRIPTSPAQDSTQYMQVDQSDSSCVVRNDTQNGGFAHAEYIFNFSKKLQE 105
           MF PNNMQLAIRIPTSP QDSTQYMQVDQSDSSCVVRNDTQNGGFAHAEYIFNFSKKLQE
Sbjct: 1   MFHPNNMQLAIRIPTSPTQDSTQYMQVDQSDSSCVVRNDTQNGGFAHAEYIFNFSKKLQE 60

Query: 106 DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSD 165
           DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQ   GKYNHSSGTPVAENEIHSHPQSD
Sbjct: 61  DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQ---GKYNHSSGTPVAENEIHSHPQSD 120

Query: 166 EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY 225
           EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY
Sbjct: 121 EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY 180

Query: 226 LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDG----------RP 285
           LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDG          RP
Sbjct: 181 LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDGRFLVICLEHLRP 240

Query: 286 YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF 345
           YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF
Sbjct: 241 YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF 300

Query: 346 YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS 405
           YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS
Sbjct: 301 YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS 360

Query: 406 SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA 465
           SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA
Sbjct: 361 SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA 420

Query: 466 QQQLSAKPERLTPR 470
           QQQLSAKPERLTPR
Sbjct: 421 QQQLSAKPERLTPR 431

[Close]

BLAST of Carg26613 vs. ExPASy TrEMBL
Match: A0A6J1I7C9 (protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471470 PE=4 SV=1)

HSP 1 Score: 813.1 bits (2099), Expect = 5.9e-232
Identity = 417/434 (96.08%), Postives = 418/434 (96.31%), Query Frame = 0


Query: 46  MFQPNNMQLAIRIPTSPAQDSTQYMQVDQSDSSCVVRNDTQNGGFAHAEYIFNFSKKLQE 105
           MF  NNMQLAIRIPTSPAQDSTQYMQVDQSDSSCVVRND QNGGFAHAEYIFNFSKKLQE
Sbjct: 1   MFHSNNMQLAIRIPTSPAQDSTQYMQVDQSDSSCVVRNDMQNGGFAHAEYIFNFSKKLQE 60

Query: 106 DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSD 165
           DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQ   GKY+HSSGTPVAENEIHSHPQSD
Sbjct: 61  DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQ---GKYHHSSGTPVAENEIHSHPQSD 120

Query: 166 EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY 225
           EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY
Sbjct: 121 EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY 180

Query: 226 LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDG----------RP 285
           LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDG          RP
Sbjct: 181 LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDGRFLVICLEHLRP 240

Query: 286 YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF 345
           YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF
Sbjct: 241 YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF 300

Query: 346 YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS 405
           YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS
Sbjct: 301 YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS 360

Query: 406 SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA 465
           SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA
Sbjct: 361 SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA 420

Query: 466 QQQLSAKPERLTPR 470
           QQQLSAKPERLTPR
Sbjct: 421 QQQLSAKPERLTPR 431

[Close]

BLAST of Carg26613 vs. ExPASy TrEMBL
Match: A0A6J1K955 (protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491245 PE=4 SV=1)

HSP 1 Score: 753.8 bits (1945), Expect = 4.2e-214
Identity = 381/434 (87.79%), Postives = 399/434 (91.94%), Query Frame = 0


Query: 46  MFQPNNMQLAIRIPTSPAQDSTQYMQVDQSDSSCVVRNDTQNGGFAHAEYIFNFSKKLQE 105
           MFQ NNMQLAIRIPTSPAQDS+QYMQVDQSD S V+  D QNGGF HAEYIFNFSKKL+E
Sbjct: 1   MFQQNNMQLAIRIPTSPAQDSSQYMQVDQSDKSLVMSGDMQNGGFTHAEYIFNFSKKLEE 60

Query: 106 DLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSD 165
           DLQTFGMKIKQHEDNIKFL TQK KLDESILDLQVILGKY HSSGTPVAENE+HSHPQS+
Sbjct: 61  DLQTFGMKIKQHEDNIKFLNTQKKKLDESILDLQVILGKY-HSSGTPVAENEVHSHPQSE 120

Query: 166 EETMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEY 225
           EETM+QIMQQEKSAAGIIC+L+ HH IQAYNI LTKDVLGIVARLGKVDDDNL RLLSEY
Sbjct: 121 EETMEQIMQQEKSAAGIICRLNTHHGIQAYNITLTKDVLGIVARLGKVDDDNLGRLLSEY 180

Query: 226 LGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDG----------RP 285
           LGMETMLAIVCRTY+GVK LE YDKEGCINKS G+HGLGASIGRNLDG          RP
Sbjct: 181 LGMETMLAIVCRTYDGVKMLETYDKEGCINKSSGLHGLGASIGRNLDGRFLVICLEHLRP 240

Query: 286 YVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLF 345
           Y GDFI NDPQRRLDL+KPRLPNGECPPGF+GFAVNMI+IDS H+FC AANGYGLRETLF
Sbjct: 241 YAGDFIPNDPQRRLDLLKPRLPNGECPPGFVGFAVNMINIDSTHLFCFAANGYGLRETLF 300

Query: 346 YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKS 405
           YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKA G+FCLGNQEDVQLRFPKASMKS
Sbjct: 301 YSLFSRLQVYKTRADMLQALPCISDGALSLDGGIIKANGLFCLGNQEDVQLRFPKASMKS 360

Query: 406 SLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESSSYAA 465
           SLPE+YIES RQ+KELKWKKEKMIEDIKRE ALL+NSKLNFDRKKAEFLKFLAESSSYAA
Sbjct: 361 SLPESYIESERQMKELKWKKEKMIEDIKREQALLNNSKLNFDRKKAEFLKFLAESSSYAA 420

Query: 466 QQQLSAKPERLTPR 470
           QQQLS KPERLTPR
Sbjct: 421 QQQLSVKPERLTPR 433

[Close]

BLAST of Carg26613 vs. TAIR 10
Match: AT3G49250.1 (defective in meristem silencing 3 )

HSP 1 Score: 439.9 bits (1130), Expect = 2.6e-123
Identity = 231/414 (55.80%), Postives = 303/414 (73.19%), Query Frame = 0


Query: 49  PNNMQLAIRIPTSPAQDSTQYMQVDQSDSSCVVRNDTQN-GGFAHAEYIFNFSKKLQEDL 108
           P   Q++ +      QD T+ M +DQ  SS V RN+TQN GG AHAE+    SK+L+ DL
Sbjct: 3   PTGQQISFQTTPLNVQDPTRMMNLDQ--SSPVARNETQNGGGIAHAEFAMFNSKRLESDL 62

Query: 109 QTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEIHSHPQSDEE 168
           +  G KIKQHEDN+KFLK+QK+K+DE+I+DLQV + K N SS TP +EN  +S     E+
Sbjct: 63  EAMGNKIKQHEDNLKFLKSQKNKMDEAIVDLQVHMSKLN-SSPTPRSENSDNS--LQGED 122

Query: 169 TMQQIMQQEKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDNLSRLLSEYLG 228
              QI++ E SAAG++  +   H  QA  +MLTK V+G+VA+LGKV+D+NLS++LS YLG
Sbjct: 123 INAQILRHENSAAGVLSLVETLHGAQASQLMLTKGVVGVVAKLGKVNDENLSQILSNYLG 182

Query: 229 METMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDG----------RPYV 288
             +MLA+VCR YE V ALE YD  G I+ + G+H LG+SIGR +            RPYV
Sbjct: 183 TRSMLAVVCRNYESVTALEAYDNHGNIDINAGLHCLGSSIGREIGDSFDAICLENLRPYV 242

Query: 289 GDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANGYGLRETLFYS 348
           G  IA+D QRRLDL+KP+LPNGECPPGFLGFAVNMI ID  ++ C+ + GYGLRETLFY+
Sbjct: 243 GQHIADDLQRRLDLLKPKLPNGECPPGFLGFAVNMIQIDPAYLLCVTSYGYGLRETLFYN 302

Query: 349 LFSRLQVYKTRADMLQALPCISDGALSLDGGIIKATGVFCLGNQEDVQLRFPKASMKSSL 408
           LFSRLQVYKTRADM+ ALPCISDGA+SLDGGII+ TG+F LGN+++V +RF K +   ++
Sbjct: 303 LFSRLQVYKTRADMISALPCISDGAVSLDGGIIRKTGIFNLGNRDEVNVRFAKPTASRTM 362

Query: 409 PENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKFLAESS 452
            +NY E+ +++KELKWKKEK +EDIKRE  L +++  NF +KK EF++ LA+SS
Sbjct: 363 -DNYSEAEKKMKELKWKKEKTLEDIKREQVLREHAVFNFGKKKEEFVRCLAQSS 410

[Close]

BLAST of Carg26613 vs. TAIR 10
Match: AT5G24280.1 (gamma-irradiation and mitomycin c induced 1 )

HSP 1 Score: 143.7 bits (361), Expect = 3.8e-34
Identity = 112/366 (30.60%), Postives = 177/366 (48.36%), Query Frame = 0


Query: 99   FSKKLQEDLQTFGMKIKQHEDNIKFLKTQKSKLDESILDLQVILGKYNHSSGTPVAENEI 158
            +++ L+E +     +  + E+ +K L+ Q+   ++    LQ  L       G P  E   
Sbjct: 1257 YTEDLKEKINIDEERRVELEERLKCLQAQREHAEQECSRLQASL----EPLGAPFPE--- 1316

Query: 159  HSHPQSDEETMQQIMQQ-EKSAAGIICKLSAHHSIQAYNIMLTKDVLGIVARLGKVDDDN 218
                 + E  M+QI ++   +AA + C L           +  K + G+VA LG V   +
Sbjct: 1317 --CLSTKESMMKQIEEKHHDTAASVFCCLYRKAPPPRSLFLSQKGMFGVVALLGSVASTS 1376

Query: 219  LSRLLSEYLGMETMLAIVCRTYEGVKALEIYDKEGCINKSFGIHGLGASIGRNLDG---- 278
            LSR+LSEYLG +TML++VC++ +     + Y K              AS+GR++      
Sbjct: 1377 LSRVLSEYLGKDTMLSLVCKSSQFGPKSDEYRK---------FQSEAASLGRSITNRFLV 1436

Query: 279  ------RPYVGDFIANDPQRRLDLIKPRLPNGECPPGFLGFAVNMIDIDSMHIFCLAANG 338
                  RP+    + NDPQ+RL +  P LPNG+  PGF G+AVNMID+ S  +   +++G
Sbjct: 1437 ICLDATRPWRNGLVRNDPQKRLAMDNPYLPNGDPIPGFKGYAVNMIDLASEELDIQSSSG 1496

Query: 339  YGLRETLFYSLFSRLQVYKTRADMLQALPCISDG-ALSLDGGIIKATGVFCLGNQEDVQL 398
            YGLRETLFY +F  LQVY+T   +  ALP I+ G A+SLDG I +  G    G       
Sbjct: 1497 YGLRETLFYGVFRELQVYETAEHLEAALPHINGGDAVSLDGVIARENGFIYSG------C 1556

Query: 399  RFPKASMKSSLPENYIESARQIKELKWKKEKMIEDIKREHALLDNSKLNFDRKKAEFLKF 453
              P+     ++ E   ++  Q++  + KK K  E +  E+  L        +   ++  F
Sbjct: 1557 CTPEVHFPITVTERQEKALVQLEITRDKKRKTEEMMTEENRSLRRLVKKLKKANEKYQNF 1598

The following BLAST results are available for this feature:

BLAST of Carg26613 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016820.1	1.7e-265	100.00	Protein DEFECTIVE IN MERISTEM SILENCING 3, partial [Cucurbita argyrosperma subsp...	[more]
KAG6579318.1	4.6e-263	97.91	Protein DEFECTIVE IN MERISTEM SILENCING 3, partial [Cucurbita argyrosperma subsp...	[more]
XP_022922277.1	1.6e-236	97.24	protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X1 [Cucurbita moschata]	[more]
XP_023551081.1	1.6e-236	97.24	protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X1 [Cucurbita pepo subsp....	[more]
XP_022972950.1	8.9e-235	96.77	protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg26613 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94A79	3.6e-122	55.80	Protein DEFECTIVE IN MERISTEM SILENCING 3 OS=Arabidopsis thaliana OX=3702 GN=DMS...	[more]
F4KFS5	5.4e-33	30.60	Structural maintenance of chromosomes flexible hinge domain-containing protein G...	[more]

BLAST of Carg26613 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E2T2	7.9e-237	97.24	protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X1 OS=Cucurbita moschata ...	[more]
A0A6J1IA28	4.3e-235	96.77	protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X1 OS=Cucurbita maxima OX...	[more]
A0A6J1E648	1.1e-233	96.54	protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X2 OS=Cucurbita moschata ...	[more]
A0A6J1I7C9	5.9e-232	96.08	protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X2 OS=Cucurbita maxima OX...	[more]
A0A6J1K955	4.2e-214	87.79	protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X2 OS=Cucurbita maxima OX...	[more]

BLAST of Carg26613 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49250.1	2.6e-123	55.80	defective in meristem silencing 3	[more]
AT5G24280.1	3.8e-34	30.60	gamma-irradiation and mitomycin c induced 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 100..134
None	No IPR available	PANTHER	PTHR33566	EN/SPM-LIKE TRANSPOSON-RELATED	coord: 88..460
None	No IPR available	PANTHER	PTHR33566:SF6	PROTEIN DEFECTIVE IN MERISTEM SILENCING 3	coord: 88..460

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26613-RA	Carg26613-RA	mRNA