Carg25992 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25992
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Peroxiredoxins prx-1 prx-2 prx-3
Location	Carg_Chr12: 11600876 .. 11604182 (-)
RNA-Seq Expression	Carg25992
Synteny	Carg25992

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATGGGATTGCAGTTTCCCGCCGCGCCGATGCTCACTGTCAGACCTGAAATTCTCGGAGTTAGGGTTCGAATCAGGCTCGAGACTTAACTGTGATCTCTATTTCATGGCAGCCTAGGGAAGAAAACTTATTCGTAATCGTTGCGTTCATGATACAACTGTAAGTTTCTTCTCTTCCTCGATGATCTCATTTTATTCGGCCTATCGTGCATCGCGGAGCCCGATTTGAATGAATTATTGCAAAATTGTTATTCTGCGCGGTATATTTTTCAATTTGATTCTGTCGTATTTAGACTGTGATGTGGATGCTTCAACATTTAGGTTTCAGATTGTTGTAATTTGAATCATATATGTGCGTTGCGGTAGGAGGAAAATGATGGAAGCTAATTTTCTTAGAACATTCTAATTTGAAACTTTGGCGTAATCATAGGGCCAAATTTGTATTTGAAGGAACAACCAATATGATTTTCAAAAGAAGATTTGTGTAATCATGCCTGGAGTAGTGAGTAGGTCATAATATCATTAGCATTTTCTTGTAAACAGGGCGTAGACCTGCTGTATTCTGTATAGTTTAGAGCTTTGAAGTGTTAAAAACGCTACCATTGGCCATGGGCTTCTGAAAAAGACCAAGATGAAGAAATGAAGCAAGAGGAAGAAGAACATCCATTCTAAAAACGATGAGGCTGGCAAGCCTGAGATGTTTAGTTGTTGAATGCCGAGTTAAGTATCCTTTGTTGATTTGTCACTAATAGTAGATATTGTTTGTTTTGGCTGGTTGTCCACCTAGCAAATATTGTCTGTTTTGGCCTATTACGTATCGTTGTCACTCTCACGATTTTAAAATGCATCCCTGTTACGTATTGCCGTAAGTGATTTGCCCACCCCTAGCAGATATTGTATGTTTTGGCCTGTTACGTATCGTCGTCAGCCTCACAGTTTTAAAACGCGTTTGAATGTTCGTTTTGGCCTCTTACATATCGCCGTTAGTGATTTGCCCACCCCCCAGTAGATATTGTCTTTTTTGACCTATTACGTATCGTCGTCAGTGATTTGCCCACTCGTCTATTTTTGCTTGTTATGTATCGTCGTCAGCCTCACGGTTTTGAAACGCGTCTTTCAGAGTTACGCAACAGAACCGGTACTCATCCAGATACTGTCCTCTTTGGGTTTACCCTTTCGGTTTTTTTCCTCAAAGTTTTTGGGCTTCCCCATTACGCATGGAGAGGTTCCATACCCTTATAAGGAATGCTTCGTTCTTCTCTCTAACCGATGTGAGATCTCACGGAAAACAACTTTATTTTGGTCGATATTTCTTAGTTTCGTTTGAAATCTGAAACTCTTTCCACGTGATTTGATTGCAGGCTGTTACTATTTGTGTACTATATACCAAAGAACTAAAGTCACTTATGAACAACAAGTACAGAATTGCAGTTGGGAGTTTCGTGCCTGTTGGACATGAGGTAGAAACTTTCTCCACTTCATTTGCTGCAAATCGGTAAGCTTTTCTAAACATTTCTGTTACCGTTAGTTTGCTTTGATGATATCCTCAATCCGATGGCTTTCAAAAACTTATTCCAATTGGTCATAGGGGTAAATAAACTATGATGAACTCCACATATCAGCCACTTTAGCTGCTTTCTTCTGTGTCATCTCAAACAGAGAGGGGAATCTGTCTTTTAGGACCAAACTTCTGTCTCGAATCTAGATTCCATAACTTTATCCAAATTTACAAAAAATGAAATTGAATATGTGTAACCGTTCAAGTCCACCGCTAGTAGATACTATCCGTTTTGGCCTGTTACGTATTGCTGTTAGTCTCATGGTTTTACAACGCGTCTGTTAGGGAGAGGTTTTCACACCCTTATAAGGTATGCTTCGTTTCCCTCTCCAACCGATGTGGGACATCAATATCATAAAATATGTGTAACAGTCTAAGTCTAGCACTAGCAGATACTGTCCGCTTTGGTTTATTAGGTATCACCATCAGCCTCACGGTTTTACAACGCGTCTGTTAGGGAGAGGTTTTTGTAATGGCCCAGATCCACCGCTAGCAGATATTGTCCTCTTTGGGTTTTCCCTTTCGGGCTTCCCCTCAAGACTTTAAAACGCGTCTGCTAGGGAGAGGTTTCCATACCCTTATAAGGTATGCTTCCTTCCCCTCTCCAACCGGCGTGGGACATCAATATCATAAAATATGTATAACAGTTTAAGTCTAGCGCTAGCAGATACTGTCCGCTTTGGCTTATTAGGTATCGTCATCAGCCTCACGATTTTACAACGCCTCTGTTAGGGAGAGGTTTCCACACCCTTATAAGAGATGCTTCATTCCCTCTGCAACCAACGTGAGACCTCAGAATATGTATCATGTATGAAGGCCCATCCGTTGACAGATAACGAAGCATCATATAAGATCCAAATTTGAGTTTGTGCTCTTCTATGCCAATGGATAACAAAAATTATCTCTCTCTCTCTCTAACACTGTATGAAGATAAAGCAGGAAGAACTTCATAACTTTTCAATCAGTACATATATATTTTTCTATATCCATGATTATCTAGATCGTGCTAGTATCATTGATAACCATTTGAACCTACTCCATTTGTTGCAAGAAAACTCCTAGGATATTAAATCTTTGATAAATGACTATCATGACTTGAACTCATTTCTTCCTTATCGACTGCTAGGTCGATCAATCCATGACGAACGGGGCCTCTTATCTTACATGTTGGAACTATTCTAGCAAATTCACTGGCTCGTGAAAATGGCCCACATCAATTATTGAGTGGGAGTATCTGATCCTCCACAATCAGATGATGTGTAAAGCAGAACCTTTCGATGTGGAAAAGTTTTGTCACAATCCCCCAATCTCAAAAGCAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTATAGTTTTGATCTTCTGATTTGTATTTAAATTGTGGAAGATACTGATATATCCTAGAATGGCAACATCATCATGTTTATAATGTGATTAACAAATCTTTTGCTCTTTTAAATACTTGAATTTCCATACTTCTTGCAGTCTGCAGATATGGCCTCCAATGGCAGCCTTAGCGTTGTGGTTTCCGCATCTCCTAAACACGACAATAGAGATGCTGAGACCATGAGGTCCAGTTCGCCGAAAGGCCAGTGTTTGTGCTCGCCCACGATGCACCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCGACATCGTCGGCGTGGATGAAACGATCAAAATCAATGCCTGCCAACAAGCCTGTGGCGTCTCTTTCTCCTAAGGAAACTCTTGGATCTTCCTAA

mRNA sequence

ATGGCTATGGGATTGCAGTTTCCCGCCGCGCCGATGCTCACTGTCAGACCTGAAATTCTCGGAGTTAGGTCTGCAGATATGGCCTCCAATGGCAGCCTTAGCGTTGTGGTTTCCGCATCTCCTAAACACGACAATAGAGATGCTGAGACCATGAGGTCCAGTTCGCCGAAAGGCCAGTGTTTGTGCTCGCCCACGATGCACCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCGACATCGTCGGCGTGGATGAAACGATCAAAATCAATGCCTGCCAACAAGCCTGTGGCGTCTCTTTCTCCTAAGGAAACTCTTGGATCTTCCTAA

Coding sequence (CDS)

ATGGCTATGGGATTGCAGTTTCCCGCCGCGCCGATGCTCACTGTCAGACCTGAAATTCTCGGAGTTAGGTCTGCAGATATGGCCTCCAATGGCAGCCTTAGCGTTGTGGTTTCCGCATCTCCTAAACACGACAATAGAGATGCTGAGACCATGAGGTCCAGTTCGCCGAAAGGCCAGTGTTTGTGCTCGCCCACGATGCACCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCGACATCGTCGGCGTGGATGAAACGATCAAAATCAATGCCTGCCAACAAGCCTGTGGCGTCTCTTTCTCCTAAGGAAACTCTTGGATCTTCCTAA

Protein sequence

MAMGLQFPAAPMLTVRPEILGVRSADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS

Homology

[Close]

BLAST of Carg25992 vs. NCBI nr
Match: KAG7021282.1 (hypothetical protein SDJN02_17970, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 210.7 bits (535), Expect = 6.3e-51
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAMGLQFPAAPMLTVRPEILGVRSADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQC 60
           MAMGLQFPAAPMLTVRPEILGVRSADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQC
Sbjct: 1   MAMGLQFPAAPMLTVRPEILGVRSADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQC 60

Query: 61  LCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS 109
           LCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS
Sbjct: 61  LCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS 108

[Close]

BLAST of Carg25992 vs. NCBI nr
Match: KAG6586427.1 (hypothetical protein SDJN03_19160, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.7 bits (491), Expect = 8.0e-46
Identity = 108/141 (76.60%), Postives = 108/141 (76.60%), Query Frame = 0


Query: 1   MAMGLQFPAAPMLTVRPEILGVR---------------------------------SADM 60
           MAMGLQFPAAPMLTVRPEILGVR                                 SADM
Sbjct: 1   MAMGLQFPAAPMLTVRPEILGVRAVTICVLYTKELKSLMNNKYRIAVGSFVPVGHESADM 60

Query: 61  ASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRS 109
           ASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRS
Sbjct: 61  ASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRS 120

[Close]

BLAST of Carg25992 vs. NCBI nr
Match: KAG7030425.1 (hypothetical protein SDJN02_08772 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 161.0 bits (406), Expect = 5.7e-36
Identity = 83/104 (79.81%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 5   LQFPAAPMLTVRPEILGVRSADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSP 64
           LQF +  +L + P +L   SADMAS+GSLSVVVS SPKH NRDAET+RSSSPKGQCLCSP
Sbjct: 33  LQFCSIDLLQIGPSLLSCMSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSP 92

Query: 65  TMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS 109
           TMHQGSFRCRLHRSTSSAWMKRSKSMPA+ PVASLS KE+LGSS
Sbjct: 93  TMHQGSFRCRLHRSTSSAWMKRSKSMPADHPVASLSSKESLGSS 136

[Close]

BLAST of Carg25992 vs. NCBI nr
Match: XP_022946647.1 (uncharacterized protein LOC111450652 [Cucurbita moschata] >XP_022946648.1 uncharacterized protein LOC111450652 [Cucurbita moschata] >XP_022946649.1 uncharacterized protein LOC111450652 [Cucurbita moschata])

HSP 1 Score: 148.7 bits (374), Expect = 3.0e-32
Identity = 76/85 (89.41%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 24  SADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAW 83
           SADMAS+GSLSVVVS SPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRS SSAW
Sbjct: 40  SADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAW 99

Query: 84  MKRSKSMPANKPVASLSPKETLGSS 109
           MKRSKSMPA+ PVASLS KE+LGSS
Sbjct: 100 MKRSKSMPADHPVASLSSKESLGSS 124

[Close]

BLAST of Carg25992 vs. NCBI nr
Match: KAG6599447.1 (hypothetical protein SDJN03_09225, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 148.7 bits (374), Expect = 3.0e-32
Identity = 76/85 (89.41%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 24  SADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAW 83
           SADMAS+GSLSVVVS SPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRS SSAW
Sbjct: 20  SADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAW 79

Query: 84  MKRSKSMPANKPVASLSPKETLGSS 109
           MKRSKSMPA+ PVASLS KE+LGSS
Sbjct: 80  MKRSKSMPADHPVASLSSKESLGSS 104

[Close]

BLAST of Carg25992 vs. ExPASy TrEMBL
Match: A0A6J1G498 (uncharacterized protein LOC111450652 OS=Cucurbita moschata OX=3662 GN=LOC111450652 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.4e-32
Identity = 76/85 (89.41%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 24  SADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAW 83
           SADMAS+GSLSVVVS SPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRS SSAW
Sbjct: 40  SADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAW 99

Query: 84  MKRSKSMPANKPVASLSPKETLGSS 109
           MKRSKSMPA+ PVASLS KE+LGSS
Sbjct: 100 MKRSKSMPADHPVASLSSKESLGSS 124

[Close]

BLAST of Carg25992 vs. ExPASy TrEMBL
Match: A0A5D3CHP3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00230 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 9.3e-32
Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 27  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 86
           MAS+GSL V VS+SPKH NRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 1   MASDGSLGVSVSSSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 87  SKSMPANKPVASLSPKETLGSS 109
           SKSMPAN PVASLSPK +LGSS
Sbjct: 61  SKSMPANNPVASLSPKGSLGSS 82

[Close]

BLAST of Carg25992 vs. ExPASy TrEMBL
Match: A0A5A7V1X5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001200 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.2e-31
Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 27  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 86
           MAS+GSL V VS SPKH NRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 1   MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 87  SKSMPANKPVASLSPKETLGSS 109
           SKSMPAN PVASLSPK +LGSS
Sbjct: 61  SKSMPANNPVASLSPKGSLGSS 82

[Close]

BLAST of Carg25992 vs. ExPASy TrEMBL
Match: A0A0A0LKU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004705 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.0e-30
Identity = 72/82 (87.80%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 27  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 86
           MAS+GSLSV VS SPKH NRDAET+RS+SPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 1   MASDGSLSVSVSTSPKHANRDAETVRSNSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 87  SKSMPANKPVASLSPKETLGSS 109
           SKSMP N PVASLSPKE+L SS
Sbjct: 61  SKSMPTNNPVASLSPKESLESS 82

[Close]

BLAST of Carg25992 vs. ExPASy TrEMBL
Match: A0A061GNT6 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_037897 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 6.4e-17
Identity = 51/76 (67.11%), Postives = 58/76 (76.32%), Query Frame = 0


Query: 27  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 86
           MAS+G  ++ VS SPK  N +A    +S   GQCLCSPT HQGSFRCR HRS+SSAWMKR
Sbjct: 1   MASHG--NITVSTSPKGSNSEAAVPTNSPKGGQCLCSPTTHQGSFRCRFHRSSSSAWMKR 60

Query: 87  SKSMPANKPVASLSPK 103
           SKSMPAN  +ASLSPK
Sbjct: 61  SKSMPANGSLASLSPK 74

[Close]

BLAST of Carg25992 vs. TAIR 10
Match: AT3G13227.1 (serine-rich protein-related )

HSP 1 Score: 49.7 bits (117), Expect = 1.7e-06
Identity = 22/42 (52.38%), Postives = 28/42 (66.67%), Query Frame = 0


Query: 52 RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN 94
          +SSS +  CLC+PT H GSFRCR HR  +   M R  S+P+N
Sbjct: 57 KSSSVRQNCLCAPTTHPGSFRCRYHRRNAGLGMSRGTSVPSN 98

[Close]

BLAST of Carg25992 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 1.9e-05
Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 0


Query: 52 RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA 93
          ++S  K  CLCSPT H GSFRCR+HRS S   ++R+KS+ A
Sbjct: 36 QTSMTKTNCLCSPTTHPGSFRCRIHRSLS---LQRTKSIEA 73

[Close]

BLAST of Carg25992 vs. TAIR 10
Match: AT1G67910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1). )

HSP 1 Score: 46.2 bits (108), Expect = 1.9e-05
Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 0


Query: 52 RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA 93
          ++S  K  CLCSPT H GSFRCR+HRS S   ++R+KS+ A
Sbjct: 36 QTSMTKTNCLCSPTTHPGSFRCRIHRSLS---LQRTKSIEA 73

[Close]

BLAST of Carg25992 vs. TAIR 10
Match: AT3G56500.1 (serine-rich protein-related )

HSP 1 Score: 43.1 bits (100), Expect = 1.6e-04
Identity = 19/42 (45.24%), Postives = 29/42 (69.05%), Query Frame = 0


Query: 57  KGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVAS 99
           K  C+C+PT H+GSFRCRLHRS++++    +  +   KP+ S
Sbjct: 62  KTVCICAPTKHEGSFRCRLHRSSATSHGAATAELHLPKPLLS 103

[Close]

BLAST of Carg25992 vs. TAIR 10
Match: AT1G24577.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67910.2); Has 115 Blast hits to 115 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 3.6e-04
Identity = 20/42 (47.62%), Postives = 30/42 (71.43%), Query Frame = 0


Query: 52 RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN 94
          ++S  K  C+CSPT H GSF+C+LHR+ S   ++R+KS+  N
Sbjct: 24 QTSITKTICICSPTTHPGSFKCKLHRTPS---LQRNKSVETN 62

The following BLAST results are available for this feature:

BLAST of Carg25992 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021282.1	6.3e-51	100.00	hypothetical protein SDJN02_17970, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6586427.1	8.0e-46	76.60	hypothetical protein SDJN03_19160, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7030425.1	5.7e-36	79.81	hypothetical protein SDJN02_08772 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022946647.1	3.0e-32	89.41	uncharacterized protein LOC111450652 [Cucurbita moschata] >XP_022946648.1 unchar...	[more]
KAG6599447.1	3.0e-32	89.41	hypothetical protein SDJN03_09225, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Carg25992 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg25992 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G498	1.4e-32	89.41	uncharacterized protein LOC111450652 OS=Cucurbita moschata OX=3662 GN=LOC1114506...	[more]
A0A5D3CHP3	9.3e-32	90.24	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V1X5	1.2e-31	90.24	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LKU3	1.0e-30	87.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004705 PE=4 SV=1	[more]
A0A061GNT6	6.4e-17	67.11	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_037897 PE=4 SV=1	[more]

BLAST of Carg25992 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13227.1	1.7e-06	52.38	serine-rich protein-related	[more]
AT1G67910.1	1.9e-05	56.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G67910.2	1.9e-05	56.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G56500.1	1.6e-04	45.24	serine-rich protein-related	[more]
AT1G24577.1	3.6e-04	47.62	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..61
None	No IPR available	PANTHER	PTHR33132:SF37	SERINE-RICH PROTEIN-LIKE PROTEIN	coord: 25..103
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 25..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25992-RA	Carg25992-RA	mRNA