Carg25930 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25930
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	phytanoyl-CoA dioxygenase
Location	Carg_Chr04: 10936515 .. 10941622 (-)
RNA-Seq Expression	Carg25930
Synteny	Carg25930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCATTGCACGTAGGGTATTTAGAATTGAGAATACGCATTGGAAGCTGTTTGGTAAGACCGCCATGGGAATTGTTCGTGATCTCAGCTCGGATCAACTCCAGTTCTTCGACTCACATGGTACGTTTCCACGCTCCCATCATCGACTTCTGTTTTCCAATCTTAATCGCTCTTCCAATTTCCACCATCATCGAACTTCTTCTCCTCCTGTTTTCTCTTATTTTTTCGCAGGTTATCTTGTGGTTGAATCATTCGCCAGTCCTGATGAAATTGACGCCATGAGAAAGAGAATGGAGCAGTTGCTAGATGAATTTGACTGCTCCACTTCCTCTGTTTTCTCTACTGTAAATCAGGTTTTTGTTTTAATAATTGATTTATTTTTTAGTAATGACTCATCGAAACTTCAGAAATTTGTATTCGAACTTCTAACTATTAGCGTTATGAACTGTTTGTGTTGAAATGTGCTTTCCCGTGTTTTTGTTACTCTATAGCAGCAGTTGACCGACGATTACTTCTTCGAAAGCGCTGAGAATATTTCCTTCTTTTTTGAGGGTATCTTACACTCTTGCCCTTTGTGTATCATTTTAATCATCTTTCTAAGTTTTCATTGTGATAGTTTCACATATACTTTTTTTTTTTTTTTCTTTTAGCATCAGAGTTTTTGGGAACTTAGTTAAGAAAATTTTTATGATGCCGATTCAAAACTTGTATACTCATTCATGTGCGAAAGAAATATGTGTTAGCTGTAGATACTGGCCATTATTCGTGATTGATGGAGCTCCTTCAGTGAGATTTCAGGATAAATAAGTTTTGGTTACAAAGAAATGTGGACATGATTTTGCCTTGGATGGGATTGGGTCCAAACCTATTAATTTGAAGTTAGTATTTAGCAGCTTCAATCCAATGATCAAATAGTAAAACTTGCTTTGTTATTCTTGTGAAAAGTAGGATTTGAATATGTTATTCACGAATCTATACAAAATTTTCATGAGTATGGTCCATGCCAATCGCCCCCCCTTTTATTTATTTTGCAGAAAAAGCATTTCAAGAGGATGGAGACTTGAAACAAGCGAAGGAACTCTCAATTAACAAAGTTGGTCATGGTTTGTATTCTTCTATTATAGTAGACTGTTGATCCCGATAGAAACTTTTTATGTCTTTTCTCTCTCTTTAGCATGGGTTTCAACTTCATCTTGGCGTACTTGGGTTTAAATGTACTCCTAACTTTTATTACTTTCACTAGGCCATTATGACTTTCAAAATAGATTCTCTCCATGCCTAGAAGCTCATAAAATAAAACCTTGGAATTCAGGATTTTTTTAATGATGCGAAATTGGGGACTTTTTTTATAATAAAAATTATAATTAACCCTTCCTTTTTGTAGCATTACATGAGATTGACCCAGTTTTCAAAAGCTTCTCCAGCTCTAAGAAGGTTTCAGGTTTATTGTTGTCCTTGGGGTACAAGAAGCCGATAGTCATTCAGTCTATGTACATATTTAAGGTTTTCCCTTTGTCGTTGTATAATTTATTAATACTAGTGTGTTAGTTTTATTCAAGTAAGTTTAATTATATATTAACGTTTGGAGGCCACTCTGACAGCAACCAGGCATTGGAGGTGAAGTTGTGCCTCACCAGGATAACTCATTTCTTTACACCGAACCAACTACATGCACAGGGCTATGGCTAGCACTTGAAGATGCAAATACAACGAACGGCTGTCTTTGGGCTATTCCTGGATCACATAAAAGTATCCCCTGGCAAGCAACTTCATAGATAGCAAACTGTCATTCCTTATGTCTAATTAATTTTATTTTTTGAATCTCTTTATTTCTAGATGGACTTGTTAGAAGATTTCTTAGAGGCGACAACGGGGTGTACTTTGATCAGCCTTCTCCTGCTTACGAACATAAAGATTTCGTGCCTATTGAAGTGAGAGCTGGATCATTGGTTGTTATTCATGGAGACCTTATTCATCAAAGGTATGTGTAAGGAATATTAAACTATTTCATTAGTTGGTCGACGTTGACAGGTTGTCTATAAATTTATACTATTCTCAATTTTTCATTCAAAGAAACTTTTTTTGTGTTTCCATCACCATTGACTCAAAAAGTACTATTCATTCTCAGCATTTGTTAAAAGTGGCTACACAGCATACCATCTCACTATTGCTAGTGATGTTAATTCATGTGAAAAGCGATGCAGTATATATATATAAAACAATGTCCCAGAATTTGTGTTTGTCCGGAGACTACTGGTTAATATTAGATTCAACATCATATGCTAAGTTTGGTGATTTTTCTAAGCACTCTGAGGAGTATGAGCTAAATTCTCCAGTTGTATGTTTTCCTTTAAAATATAAATTATGACAATTTTATCCCGAAACTCATTGCTGTCCAATTTCTCTCATGTGTGAACTATAGCTTTGAGAATCACTCTCCAAAATCAAGACATGCGTATAGCCTACACGTGGTTGATACAGAAGGTTGTGTATGGGCTCCAGATAATTGGTGAGTACATAAAAGTTTGCACTGTTTACCCGCTCTCTTAAATAAAGGGGCTAATTTTCCATAGACAGATTCATTTTATTTTGTTATTGAAGGAACCTTAACTAGTTTTGATATTAATACTTCCGTCAGCTATTGTTTAAATGTTTTCATCTAGCATATAAATTTTTTTTATTTTTTATTTTTACATAGAATTTAGAACAAACTTTCATTGAGAGATATGATTATAAATGTGGAAGATACCTCCCTCACAAAGCCTACAGTTAAGCTAATATGTGTATGGTTAGCTCCACTCTTTAGTTAATTTTCCAATTATTTATAATAAGAAAAGAGATGCCTCAAAATAATTGAGGCTCTAAGCAGAACCGTTTTTTTCTTTTAAAGGAAATAGAAATACTGTTGTCGAATGAAATTACAAAAGAGGGGGAGATTCCCAAGTCATTTGGATTTCAAAAGGACCTTCCATCTGACCAAAAGAATGCTGAACCTATAGTTGGAGAAAGGAAGATAACGTTTTCTCATATATAGTGCTAAAGTGAGAACTTTGTTCGAAGTAGATTCAGAAGTATCCTTCATTTCAGTAAGATGATATTGTTTTTGTGACCAAAGCTTTCCAAAGAAGGCTAACATTTAGAGACAGAATTTCTTTCTTTTTTTTAAATGGGTGACCCAACAATTTGGCAACAAGAAAATCGCTTGGATTGATAGGAACTCCGGACTGCAGCATGCCAATTGAAAGATTCTCGGATTGAAAGGCCAACATTTATGACCTTAGGGGTTTGAGACGAACGGATGTCCTATTGATCCAGCATCCTCATCACACATGCAGCACCACCCATGGAAGGTGGTTTGGCAGTTTGAAATGCACATACAACCTCATTACTGAAAAGTAATTGGCCAGTTGGCTCAAAGCACCACCTTTCAGGTCTTCTAGAAAGGGTTGTACACGATTTTGTGGGAAAATCAAGGAATTTGGAGACGTTGATCCTTGGGGCCTTTTCCTCCTAGGTTAGTGAGTTTGGAGGCATTGAACATAGCAAACATCCTCCAAATGAGATCATATGAACGAATTGGTTACATGGCATGTATAAACCCCCACCTTCTGAAGGAGTTGAATTCTCCAAATTCTCTTACATGAGAAGACTGTGTCAGGAAAAATTTAAGAATGGAAACTAGACAAGTCAAGATCCTGATTCCCTTGTTCTATCCGGAATAGAGTAGTTCTTTTAACTTTGAAGTATTCTTTAGACACCACCTTCATCTCTCGGTTATTAATAATCCTTCTAAAGCGAAAGGAAGAGTGGTCGAGGGAAGTCTTGCATGGCTGGCGGCTTGTTTGCAAGGCAAGGGCTGATTTTGAAAGAAAGAAACGATAGATTCTGTAAAGATAATCACAATTCTTGTGGTTACCTTTGTGACCTAGTACAATTCACGGCCTCTATTTGGAGTAGCTAACACAGGCCTTTTTGTAAAAACTCCACTTTCCATATGAGCTTAGAATGGAAGGTGTGGCTGTATTCTTACTCCTTGGAGAGGGGACCCCTTCGCCCTTTAGGTTGTTTTCTTTTTAACCTCTTTACTTTATTTCAAAATTAAGTGTTTTCATGTGCCTTATAAGGGGATGTTGGCGTAGTTGACTCAATTGAAGAAATATAGAAGAATCACATTAGCTCTAGCTTGGATGAAGAAAGTCTGTCCAGATTATTCTTCCATTCTGGTTTAGTTCCTTAGATTATGGTTCAGTACTACATTCCCATCTAAAGCTAACATATTTTTTTAGTTATTGGCTTGGAGGAGATTCAACATTGTTGATCTCTTGCAAAAAAGAATGTCAATTTTAATTTCATTGTATTAAGCTGAATCTGAGATGAGTAACATAGGAGTCATTTATACGGATGCTAGAAACTATGAGGCATCCTATTGTATCAACATCTGTGCTCTGTTTTAGGTTTGAGGCAATGATATTTCAACATGAAGTTCTATTTATAGTTGGGGCAAGCTGCGAGGCAGTGACTGACTCCATTGTATTTAAGATTATTGCCCATAGTTGAGTCAGGAAAAAAACTATTGGTCCAGTTTGGAATCTCCAGCTTCAATTTTGGGATGTTAGGCACGGTGTATGAGGATTCTTTTTTAAAATTTTTATTTTTGTGTTGACTGAAAATGCTCCAAAAAAACGATGCAGACATTAATTATAGTGGCCATTGAATAATGGATAAGTTGACATTGATTCATAATAATTATTAAATTGAGAGGAGTATCGTTTGTATTTCCCTCAGATATATCATCTCCTAACATTCATCCTTCATTCTCATACAGGATTAGAAGAAAAGTGCAGCCAGAGCCTCTTTATGAATCTTGATTGAATCTGGTTTGTTTCTTCACAAAGTTTACACCTGATTGTTCATATGACATATGGGGTGACACAGTTGTTATAATGCAATAAATAGACGTGCTAAAGTTTCATTAACTCAACTCTGTAATCTTTGTAGCTTTTAAGATATTCCTCACAATTGCTAAGGCTTAGGTTGTATAACCATCTTTATCCTGTCTTGGATGTATTTGATTTAGTTGTTTATTTCATACTGATTAAGTTTCCTTTA

mRNA sequence

AATCATTGCACGTAGGGTATTTAGAATTGAGAATACGCATTGGAAGCTGTTTGGTAAGACCGCCATGGGAATTGTTCGTGATCTCAGCTCGGATCAACTCCAGTTCTTCGACTCACATGGTTATCTTGTGGTTGAATCATTCGCCAGTCCTGATGAAATTGACGCCATGAGAAAGAGAATGGAGCAGTTGCTAGATGAATTTGACTGCTCCACTTCCTCTGTTTTCTCTACTGTAAATCAGCAGCAGTTGACCGACGATTACTTCTTCGAAAGCGCTGAGAATATTTCCTTCTTTTTTGAGGAAAAAGCATTTCAAGAGGATGGAGACTTGAAACAAGCGAAGGAACTCTCAATTAACAAAGTTGGTCATGCATTACATGAGATTGACCCAGTTTTCAAAAGCTTCTCCAGCTCTAAGAAGGTTTCAGGTTTATTGTTGTCCTTGGGGTACAAGAAGCCGATAGTCATTCAGTCTATGTACATATTTAAGCAACCAGGCATTGGAGGTGAAGTTGTGCCTCACCAGGATAACTCATTTCTTTACACCGAACCAACTACATGCACAGGGCTATGGCTAGCACTTGAAGATGCAAATACAACGAACGGCTGTCTTTGGGCTATTCCTGGATCACATAAAAATGGACTTGTTAGAAGATTTCTTAGAGGCGACAACGGGGTGTACTTTGATCAGCCTTCTCCTGCTTACGAACATAAAGATTTCGTGCCTATTGAAGTGAGAGCTGGATCATTGGTTGTTATTCATGGAGACCTTATTCATCAAAGCTTTGAGAATCACTCTCCAAAATCAAGACATGCGTATAGCCTACACGTGGTTGATACAGAAGGTTGTGTATGGGCTCCAGATAATTGGATTAGAAGAAAAGTGCAGCCAGAGCCTCTTTATGAATCTTGATTGAATCTGGTTTGTTTCTTCACAAAGTTTACACCTGATTGTTCATATGACATATGGGGTGACACAGTTGTTATAATGCAATAAATAGACGTGCTAAAGTTTCATTAACTCAACTCTGTAATCTTTGTAGCTTTTAAGATATTCCTCACAATTGCTAAGGCTTAGGTTGTATAACCATCTTTATCCTGTCTTGGATGTATTTGATTTAGTTGTTTATTTCATACTGATTAAGTTTCCTTTA

Coding sequence (CDS)

ATGGGAATTGTTCGTGATCTCAGCTCGGATCAACTCCAGTTCTTCGACTCACATGGTTATCTTGTGGTTGAATCATTCGCCAGTCCTGATGAAATTGACGCCATGAGAAAGAGAATGGAGCAGTTGCTAGATGAATTTGACTGCTCCACTTCCTCTGTTTTCTCTACTGTAAATCAGCAGCAGTTGACCGACGATTACTTCTTCGAAAGCGCTGAGAATATTTCCTTCTTTTTTGAGGAAAAAGCATTTCAAGAGGATGGAGACTTGAAACAAGCGAAGGAACTCTCAATTAACAAAGTTGGTCATGCATTACATGAGATTGACCCAGTTTTCAAAAGCTTCTCCAGCTCTAAGAAGGTTTCAGGTTTATTGTTGTCCTTGGGGTACAAGAAGCCGATAGTCATTCAGTCTATGTACATATTTAAGCAACCAGGCATTGGAGGTGAAGTTGTGCCTCACCAGGATAACTCATTTCTTTACACCGAACCAACTACATGCACAGGGCTATGGCTAGCACTTGAAGATGCAAATACAACGAACGGCTGTCTTTGGGCTATTCCTGGATCACATAAAAATGGACTTGTTAGAAGATTTCTTAGAGGCGACAACGGGGTGTACTTTGATCAGCCTTCTCCTGCTTACGAACATAAAGATTTCGTGCCTATTGAAGTGAGAGCTGGATCATTGGTTGTTATTCATGGAGACCTTATTCATCAAAGCTTTGAGAATCACTCTCCAAAATCAAGACATGCGTATAGCCTACACGTGGTTGATACAGAAGGTTGTGTATGGGCTCCAGATAATTGGATTAGAAGAAAAGTGCAGCCAGAGCCTCTTTATGAATCTTGA

Protein sequence

MGIVRDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQQLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKVSGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNGCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQSFENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES

Homology

[Close]

BLAST of Carg25930 vs. NCBI nr
Match: KAG7032402.1 (Phytanoyl-CoA dioxygenase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 585.5 bits (1508), Expect = 2.5e-163
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MGIVRDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           MGIVRDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ
Sbjct: 1   MGIVRDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
           QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV
Sbjct: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 283
           FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES
Sbjct: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 282

[Close]

BLAST of Carg25930 vs. NCBI nr
Match: XP_022957400.1 (phytanoyl-CoA dioxygenase [Cucurbita moschata])

HSP 1 Score: 584.3 bits (1505), Expect = 5.5e-163
Identity = 281/282 (99.65%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MGIVRDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           MGIVRDL+SDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ
Sbjct: 1   MGIVRDLNSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
           QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV
Sbjct: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 283
           FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES
Sbjct: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 282

[Close]

BLAST of Carg25930 vs. NCBI nr
Match: XP_023516663.1 (phytanoyl-CoA dioxygenase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 582.8 bits (1501), Expect = 1.6e-162
Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MGIVRDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           MGIV DLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ
Sbjct: 1   MGIVGDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
           QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV
Sbjct: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 283
           FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES
Sbjct: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 282

[Close]

BLAST of Carg25930 vs. NCBI nr
Match: KAG6601643.1 (Phytanoyl-CoA dioxygenase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 578.9 bits (1491), Expect = 2.3e-161
Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MGIVRDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           MGIVRDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVN Q
Sbjct: 1   MGIVRDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVN-Q 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
           QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV
Sbjct: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 283
           FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES
Sbjct: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 281

[Close]

BLAST of Carg25930 vs. NCBI nr
Match: XP_022998431.1 (phytanoyl-CoA dioxygenase [Cucurbita maxima])

HSP 1 Score: 565.8 bits (1457), Expect = 2.0e-157
Identity = 272/282 (96.45%), Postives = 279/282 (98.94%), Query Frame = 0


Query: 1   MGIVRDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           M IVRDL+SDQLQF+DS GYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFS+VNQ+
Sbjct: 1   MEIVRDLNSDQLQFYDSQGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSSVNQR 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
           QLTDDYFF+SAENISFFFEEKAFQEDG+LKQAKELSINKVGHALHEIDPVFKSFSSSKKV
Sbjct: 61  QLTDDYFFQSAENISFFFEEKAFQEDGNLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRFLRGDNGVYFDQ SPAYEHKDF+PIEVRAGSLVVIHGDLIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQLSPAYEHKDFMPIEVRAGSLVVIHGDLIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 283
           FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES
Sbjct: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 282

[Close]

BLAST of Carg25930 vs. ExPASy Swiss-Prot
Match: Q9ZVF6 (Phytanoyl-CoA dioxygenase OS=Arabidopsis thaliana OX=3702 GN=PAHX PE=2 SV=2)

HSP 1 Score: 447.6 bits (1150), Expect = 1.1e-124
Identity = 205/280 (73.21%), Postives = 240/280 (85.71%), Query Frame = 0


Query: 1   MGIVRDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           MGI   L+ DQL FF S GYLV+ESFAS DEI  +RKRM++LL++FDCS SS+FST NQ+
Sbjct: 1   MGITGSLTPDQLDFFHSQGYLVIESFASEDEIRGLRKRMDELLNQFDCSVSSIFSTKNQK 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
             TD+YFFESAE ISFFFEEKAF +DG LKQ K+LSINKVGHALHE+DP++K F+ S K 
Sbjct: 61  HTTDNYFFESAEKISFFFEEKAFGDDGKLKQPKQLSINKVGHALHELDPLYKDFTYSSKF 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           S L  SLGY++P+V+QSMYIFKQPGIGGEVVPHQDNSF+YT+P +CTGLW+ALED+   N
Sbjct: 121 SSLASSLGYRRPVVMQSMYIFKQPGIGGEVVPHQDNSFVYTDPQSCTGLWIALEDSTLVN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRF+RGDNG+ FDQPSP+YE KDFV IE++AGSL+ IHGDLIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFIRGDNGITFDQPSPSYEQKDFVSIEMKAGSLIAIHGDLIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLY 281
           FEN S KSRHAYSLHVV+++GC WA DNWI+R   PEPLY
Sbjct: 241 FENLSSKSRHAYSLHVVESDGCKWAKDNWIQRAKMPEPLY 280

[Close]

BLAST of Carg25930 vs. ExPASy Swiss-Prot
Match: Q10E49 (Phytanoyl-CoA dioxygenase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0708100 PE=2 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 5.4e-113
Identity = 191/276 (69.20%), Postives = 229/276 (82.97%), Query Frame = 0


Query: 7   LSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQQLTDDY 66
           L+ +QL+FFD++GYLV+ SF+S +E+ AMR RM +L+D FD     VFST + +Q+ +D+
Sbjct: 7   LTDEQLRFFDANGYLVLGSFSSAEEVRAMRDRMAELVDGFD-GAGDVFSTKDHRQVKNDF 66

Query: 67  FFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKVSGLLLS 126
           FF+SAENISFFFEEKAF +DG LKQAKELSINKVGHALHE+DPVFK FS    VS L  S
Sbjct: 67  FFKSAENISFFFEEKAFGDDGCLKQAKELSINKVGHALHELDPVFKKFSFGANVSSLFSS 126

Query: 127 LGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNGCLWAI 186
           L YK+P VIQSMYIFKQPGIGGEVVPHQDN+FLYT+P +CTGLWLALEDA  TNGCLWAI
Sbjct: 127 LRYKRPAVIQSMYIFKQPGIGGEVVPHQDNTFLYTDPPSCTGLWLALEDATKTNGCLWAI 186

Query: 187 PGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQSFENHSP 246
           PGSHKNGL RR +R +   +FD PSP Y+ K+FVP+EV++G LVVIHGDLIHQSFEN SP
Sbjct: 187 PGSHKNGLKRRMIRDEIDTHFDHPSPTYDLKEFVPLEVKSGDLVVIHGDLIHQSFENLSP 246

Query: 247 KSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 283
            SRHA SLHV+DTEGC W+  NW++RK+ P+PLYE+
Sbjct: 247 VSRHALSLHVIDTEGCEWSKQNWLQRKIPPQPLYEN 281

[Close]

BLAST of Carg25930 vs. ExPASy Swiss-Prot
Match: Q65WW7 (Phytanoyl-CoA dioxygenase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0473900 PE=2 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 4.6e-112
Identity = 190/276 (68.84%), Postives = 226/276 (81.88%), Query Frame = 0


Query: 7   LSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQQLTDDY 66
           L+  QL FFD++GYLV+ SF+S +E+ AMR RM  L+D FD     VFST + +Q+ +D+
Sbjct: 7   LTDKQLHFFDANGYLVLGSFSSAEEVKAMRDRMAVLIDGFD-GAGDVFSTKDHRQVKNDF 66

Query: 67  FFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKVSGLLLS 126
           FF+SAENISFFFEEKAF +DG LKQAKELSINKVGHALHE+DPVFK FS  + VS L  S
Sbjct: 67  FFKSAENISFFFEEKAFGDDGCLKQAKELSINKVGHALHELDPVFKKFSFGENVSSLFSS 126

Query: 127 LGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNGCLWAI 186
           L YK+P VIQSMYIFKQPGIGGEVVPHQDN+FLYT P +CTGLWLALEDA  TNGCLWAI
Sbjct: 127 LRYKRPAVIQSMYIFKQPGIGGEVVPHQDNTFLYTNPPSCTGLWLALEDATKTNGCLWAI 186

Query: 187 PGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQSFENHSP 246
           PGSHKNGL RR +R +N  +FD PSP Y+ K+FVP+EV++G LVVIHGDL+HQSFEN S 
Sbjct: 187 PGSHKNGLKRRMIRDENDTHFDHPSPTYDLKEFVPLEVKSGDLVVIHGDLVHQSFENLSL 246

Query: 247 KSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 283
            SRHA SLHV+DTEGC W+  NW++RK+ P+PLYE+
Sbjct: 247 VSRHALSLHVIDTEGCEWSKQNWLQRKIPPQPLYEN 281

[Close]

BLAST of Carg25930 vs. ExPASy Swiss-Prot
Match: Q9DB26 (Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Mus musculus OX=10090 GN=Phyhd1 PE=1 SV=2)

HSP 1 Score: 261.2 bits (666), Expect = 1.4e-68
Identity = 137/285 (48.07%), Postives = 180/285 (63.16%), Query Frame = 0


Query: 7   LSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFD----CSTSSVFSTVNQQQL 66
           LS  QL+ F   G+L++E F + DE  AM++R+ +++ E D    C T   FST   +QL
Sbjct: 4   LSPSQLKKFQEDGFLLLEGFFTADECVAMQQRIGEIVAEMDVPLHCRTE--FSTQEDEQL 63

Query: 67  ----TDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSK 126
                 DYF  S + I FFFE+  F E G+     E SINK+GHALH  DPVF+S + S 
Sbjct: 64  QTQGKTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFRSITHSP 123

Query: 127 KVSGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPT-TCTGLWLALEDAN 186
           KV  L+ SLG + P+V+QSMYIFKQP  GGEV PHQD +FLYTEP     GLW+A+EDA 
Sbjct: 124 KVQALVRSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDATFLYTEPLGRVLGLWIAMEDAM 183

Query: 187 TTNGCLWAIPGSHKNGLVRRFLRGDN----GVYFDQPSPAYEHKDFVPIEVRAGSLVVIH 246
             NGCLW IPGSH  G+ RR +R  +    G  F    PA+    FVP+ VR G LV+IH
Sbjct: 184 LENGCLWFIPGSHTRGVSRRMIRAPSDSGPGTSFLGSDPAWASNLFVPLPVRRGGLVLIH 243

Query: 247 GDLIHQSFENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEP 279
           G+++H+S +NHS  SR AY++H+++  G VW+P NW+    QP P
Sbjct: 244 GEVVHKSEQNHSDHSRQAYTVHLMEAAGTVWSPGNWL----QPTP 282

[Close]

BLAST of Carg25930 vs. ExPASy Swiss-Prot
Match: Q0IIB1 (Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Bos taurus OX=9913 GN=PHYHD1 PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.8e-68
Identity = 135/285 (47.37%), Postives = 181/285 (63.51%), Query Frame = 0


Query: 7   LSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFD----CSTSSVFSTVNQQQL 66
           LS  QLQ F   G+LV+E F S DE +AM++R+++++ + D    C T   FST  ++QL
Sbjct: 4   LSPSQLQKFQEDGFLVLEGFLSADECEAMQRRIDEIVAKMDVPLHCRTE--FSTQEEEQL 63

Query: 67  ----TDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSK 126
               + DYF  S + I FFFE+  F + G+     E SINK+GHALH +DP+F+  + S 
Sbjct: 64  RAQGSTDYFLSSGDKIRFFFEKGVFDKQGNFLVPPEKSINKIGHALHALDPIFRCVTHSH 123

Query: 127 KVSGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPT-TCTGLWLALEDAN 186
           KV  L  SLG + P+V+QSMYIFKQP  GGEV PHQD SFLYTEP     GLW+ALEDA 
Sbjct: 124 KVQALARSLGLQMPVVVQSMYIFKQPHFGGEVAPHQDASFLYTEPLGRVLGLWIALEDAM 183

Query: 187 TTNGCLWAIPGSHKNGLVRRFLR----GDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIH 246
             NGCLW IPGSH  G+ RR +R       G  F    P  ++  FVP  V  G+LV+IH
Sbjct: 184 LENGCLWFIPGSHTGGVSRRMVRTPAGSVPGTSFLGSEPIRDNSLFVPTPVLRGALVLIH 243

Query: 247 GDLIHQSFENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEP 279
           G+++H+S +N S +SR AY+ H+++  G +W+PDNW+    QP P
Sbjct: 244 GEVVHKSEQNLSDRSRQAYTFHLMEAAGTIWSPDNWL----QPTP 282

[Close]

BLAST of Carg25930 vs. ExPASy TrEMBL
Match: A0A6J1H0F6 (phytanoyl-CoA dioxygenase OS=Cucurbita moschata OX=3662 GN=LOC111458811 PE=4 SV=1)

HSP 1 Score: 584.3 bits (1505), Expect = 2.7e-163
Identity = 281/282 (99.65%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MGIVRDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           MGIVRDL+SDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ
Sbjct: 1   MGIVRDLNSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
           QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV
Sbjct: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 283
           FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES
Sbjct: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 282

[Close]

BLAST of Carg25930 vs. ExPASy TrEMBL
Match: A0A6J1KA75 (phytanoyl-CoA dioxygenase OS=Cucurbita maxima OX=3661 GN=LOC111493063 PE=4 SV=1)

HSP 1 Score: 565.8 bits (1457), Expect = 9.8e-158
Identity = 272/282 (96.45%), Postives = 279/282 (98.94%), Query Frame = 0


Query: 1   MGIVRDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           M IVRDL+SDQLQF+DS GYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFS+VNQ+
Sbjct: 1   MEIVRDLNSDQLQFYDSQGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSSVNQR 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
           QLTDDYFF+SAENISFFFEEKAFQEDG+LKQAKELSINKVGHALHEIDPVFKSFSSSKKV
Sbjct: 61  QLTDDYFFQSAENISFFFEEKAFQEDGNLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRFLRGDNGVYFDQ SPAYEHKDF+PIEVRAGSLVVIHGDLIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQLSPAYEHKDFMPIEVRAGSLVVIHGDLIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 283
           FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES
Sbjct: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 282

[Close]

BLAST of Carg25930 vs. ExPASy TrEMBL
Match: A0A6J1DC12 (phytanoyl-CoA dioxygenase-like OS=Momordica charantia OX=3673 GN=LOC111019644 PE=4 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 1.7e-149
Identity = 256/281 (91.10%), Postives = 272/281 (96.80%), Query Frame = 0


Query: 1   MGIVRDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           MGI+ +L+SDQLQFFDS GYLV+ESFAS DE+DAMRKRMEQLLD FDCSTSSVFSTVNQ+
Sbjct: 1   MGILGNLNSDQLQFFDSQGYLVIESFASSDEVDAMRKRMEQLLDGFDCSTSSVFSTVNQR 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
           QLTDDYFFESAEN+SFFFEEKAF+EDG+LKQAKELSINKVGHALHEIDPVFKSFS S+KV
Sbjct: 61  QLTDDYFFESAENVSFFFEEKAFREDGNLKQAKELSINKVGHALHEIDPVFKSFSYSEKV 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYK+PIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRFLRG+ G+YFD+PSPAYE KDFVPIEV+AGSLVVIHGDLIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGEKGMYFDRPSPAYEQKDFVPIEVKAGSLVVIHGDLIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYE 282
           FEN SPKSRHAYSLHVVDT+GCVWA DNWIRRKVQPEPLYE
Sbjct: 241 FENQSPKSRHAYSLHVVDTDGCVWAQDNWIRRKVQPEPLYE 281

[Close]

BLAST of Carg25930 vs. ExPASy TrEMBL
Match: A0A6J1DMB5 (phytanoyl-CoA dioxygenase-like OS=Momordica charantia OX=3673 GN=LOC111022332 PE=4 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 3.5e-147
Identity = 254/281 (90.39%), Postives = 268/281 (95.37%), Query Frame = 0


Query: 1   MGIVRDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           M IV  L+SDQL+FF+S GYLV+ESFAS DEIDAMRKRMEQLLD FDCSTSSVFSTVNQ+
Sbjct: 1   MVIVGTLNSDQLRFFESQGYLVIESFASSDEIDAMRKRMEQLLDGFDCSTSSVFSTVNQR 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
           Q+TDDYFFESAEN+SFFFEEKAF+EDG+LKQAKELSINKVGHALHEIDPVFKSFS S+ V
Sbjct: 61  QVTDDYFFESAENVSFFFEEKAFREDGNLKQAKELSINKVGHALHEIDPVFKSFSYSENV 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYK+PI IQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDA TTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDAKTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRFLRG+NGVYFDQPSPAYE KDFVPIEV+AGSLVVIHGDLIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGENGVYFDQPSPAYEQKDFVPIEVKAGSLVVIHGDLIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYE 282
           FEN SPKSRHAYSLHVVDT+GCVWA DNWIRRKVQPEPLYE
Sbjct: 241 FENQSPKSRHAYSLHVVDTDGCVWAQDNWIRRKVQPEPLYE 281

[Close]

BLAST of Carg25930 vs. ExPASy TrEMBL
Match: A0A1S3CNE4 (phytanoyl-CoA dioxygenase isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502875 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.2e-142
Identity = 246/282 (87.23%), Postives = 261/282 (92.55%), Query Frame = 0


Query: 1   MGIVRDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           MGIV +L+SDQLQFF SHGYLV+ESFA+PDE+ AMR RME LL  FDCSTSSVFSTVNQQ
Sbjct: 1   MGIVPNLNSDQLQFFHSHGYLVIESFATPDEVHAMRNRMELLLHGFDCSTSSVFSTVNQQ 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
             TDDYF +SAENISFFFEEKAF EDG+LKQ K+LSINKVGHALHE+DPVFKSFS S+K 
Sbjct: 61  LSTDDYFLQSAENISFFFEEKAFGEDGNLKQGKKLSINKVGHALHELDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYK+PI IQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRFLRGD GVYFDQPSP Y+ KDFVPIEV+AGSLVVIHGD+IHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYDKKDFVPIEVKAGSLVVIHGDVIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 283
           FEN SPKSRHAYSLHVVDTEGCVWA DNWIRRKVQ EPLYE+
Sbjct: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQLEPLYET 282

[Close]

BLAST of Carg25930 vs. TAIR 10
Match: AT2G01490.1 (phytanoyl-CoA dioxygenase (PhyH) family protein )

HSP 1 Score: 447.6 bits (1150), Expect = 7.5e-126
Identity = 205/280 (73.21%), Postives = 240/280 (85.71%), Query Frame = 0


Query: 1   MGIVRDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           MGI   L+ DQL FF S GYLV+ESFAS DEI  +RKRM++LL++FDCS SS+FST NQ+
Sbjct: 1   MGITGSLTPDQLDFFHSQGYLVIESFASEDEIRGLRKRMDELLNQFDCSVSSIFSTKNQK 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
             TD+YFFESAE ISFFFEEKAF +DG LKQ K+LSINKVGHALHE+DP++K F+ S K 
Sbjct: 61  HTTDNYFFESAEKISFFFEEKAFGDDGKLKQPKQLSINKVGHALHELDPLYKDFTYSSKF 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           S L  SLGY++P+V+QSMYIFKQPGIGGEVVPHQDNSF+YT+P +CTGLW+ALED+   N
Sbjct: 121 SSLASSLGYRRPVVMQSMYIFKQPGIGGEVVPHQDNSFVYTDPQSCTGLWIALEDSTLVN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRF+RGDNG+ FDQPSP+YE KDFV IE++AGSL+ IHGDLIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFIRGDNGITFDQPSPSYEQKDFVSIEMKAGSLIAIHGDLIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLY 281
           FEN S KSRHAYSLHVV+++GC WA DNWI+R   PEPLY
Sbjct: 241 FENLSSKSRHAYSLHVVESDGCKWAKDNWIQRAKMPEPLY 280

The following BLAST results are available for this feature:

BLAST of Carg25930 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032402.1	2.5e-163	100.00	Phytanoyl-CoA dioxygenase [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022957400.1	5.5e-163	99.65	phytanoyl-CoA dioxygenase [Cucurbita moschata]	[more]
XP_023516663.1	1.6e-162	99.65	phytanoyl-CoA dioxygenase [Cucurbita pepo subsp. pepo]	[more]
KAG6601643.1	2.3e-161	99.65	Phytanoyl-CoA dioxygenase, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022998431.1	2.0e-157	96.45	phytanoyl-CoA dioxygenase [Cucurbita maxima]	[more]

BLAST of Carg25930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVF6	1.1e-124	73.21	Phytanoyl-CoA dioxygenase OS=Arabidopsis thaliana OX=3702 GN=PAHX PE=2 SV=2	[more]
Q10E49	5.4e-113	69.20	Phytanoyl-CoA dioxygenase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g070...	[more]
Q65WW7	4.6e-112	68.84	Phytanoyl-CoA dioxygenase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g047...	[more]
Q9DB26	1.4e-68	48.07	Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Mus musculus OX=10090 G...	[more]
Q0IIB1	1.8e-68	47.37	Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Bos taurus OX=9913 GN=P...	[more]

BLAST of Carg25930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H0F6	2.7e-163	99.65	phytanoyl-CoA dioxygenase OS=Cucurbita moschata OX=3662 GN=LOC111458811 PE=4 SV=...	[more]
A0A6J1KA75	9.8e-158	96.45	phytanoyl-CoA dioxygenase OS=Cucurbita maxima OX=3661 GN=LOC111493063 PE=4 SV=1	[more]
A0A6J1DC12	1.7e-149	91.10	phytanoyl-CoA dioxygenase-like OS=Momordica charantia OX=3673 GN=LOC111019644 PE...	[more]
A0A6J1DMB5	3.5e-147	90.39	phytanoyl-CoA dioxygenase-like OS=Momordica charantia OX=3673 GN=LOC111022332 PE...	[more]
A0A1S3CNE4	1.2e-142	87.23	phytanoyl-CoA dioxygenase isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502875 PE=...	[more]

BLAST of Carg25930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01490.1	7.5e-126	73.21	phytanoyl-CoA dioxygenase (PhyH) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008775	Phytanoyl-CoA dioxygenase	PFAM	PF05721	PhyH	coord: 15..251 e-value: 3.0E-64 score: 217.1
None	No IPR available	GENE3D	2.60.120.620	q2cbj1_9rhob like domain	coord: 5..280 e-value: 1.8E-105 score: 354.2
None	No IPR available	PANTHER	PTHR20883:SF15	PHYTANOYL-COA DIOXYGENASE DOMAIN-CONTAINING PROTEIN 1	coord: 6..277
None	No IPR available	PANTHER	PTHR20883	PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1	coord: 6..277
None	No IPR available	SUPERFAMILY	51197	Clavaminate synthase-like	coord: 7..273

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25930-RA	Carg25930-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0051213	dioxygenase activity