Carg25917 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25917
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	receptor like protein 56
Location	Carg_Chr04: 11148289 .. 11148678 (+)
RNA-Seq Expression	Carg25917
Synteny	Carg25917

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGCTTGGACCTTTCTTATAACTTGTTGAGTGGAGGCATCCCTTCCAACCTATCTCAGCTCGATTTTCTTTCGTTCTTCAATGTGTCCTACAACAACTTGTCGGGCGTAATCCCTATGTCACCCCACCTTAGAACATTTGTTGAGGGCAGCTATTTAGGTAACCCTAATCTTTGCGGGGTGGTTGCTGGAAAAGGTTGCTCGAGTCATAAGTGGAGACCAAAGAATCAATATGAGGAGTTGATGAGAGATGAAGAAGATGACAAGATTAATGGATATGTAGATACGTTCTATTGGAGTTTTGTTGCATCATATCTCATGGTATTGGAGATATTGTTGGGACTCGTGATGCTTCTCTTTGTTAACTCTCGGTGGAGAGGGATATAG

mRNA sequence

ATGGTGAGCTTGGACCTTTCTTATAACTTGTTGAGTGGAGGCATCCCTTCCAACCTATCTCAGCTCGATTTTCTTTCGTTCTTCAATGTGTCCTACAACAACTTGTCGGGCGTAATCCCTATGTCACCCCACCTTAGAACATTTGTTGAGGGCAGCTATTTAGGTAACCCTAATCTTTGCGGGGTGGTTGCTGGAAAAGGTTGCTCGAGTCATAAGTGGAGACCAAAGAATCAATATGAGGAGTTGATGAGAGATGAAGAAGATGACAAGATTAATGGATATGTAGATACGTTCTATTGGAGTTTTGTTGCATCATATCTCATGGTATTGGAGATATTGTTGGGACTCGTGATGCTTCTCTTTGTTAACTCTCGGTGGAGAGGGATATAG

Coding sequence (CDS)

ATGGTGAGCTTGGACCTTTCTTATAACTTGTTGAGTGGAGGCATCCCTTCCAACCTATCTCAGCTCGATTTTCTTTCGTTCTTCAATGTGTCCTACAACAACTTGTCGGGCGTAATCCCTATGTCACCCCACCTTAGAACATTTGTTGAGGGCAGCTATTTAGGTAACCCTAATCTTTGCGGGGTGGTTGCTGGAAAAGGTTGCTCGAGTCATAAGTGGAGACCAAAGAATCAATATGAGGAGTTGATGAGAGATGAAGAAGATGACAAGATTAATGGATATGTAGATACGTTCTATTGGAGTTTTGTTGCATCATATCTCATGGTATTGGAGATATTGTTGGGACTCGTGATGCTTCTCTTTGTTAACTCTCGGTGGAGAGGGATATAG

Protein sequence

MVSLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLCGVVAGKGCSSHKWRPKNQYEELMRDEEDDKINGYVDTFYWSFVASYLMVLEILLGLVMLLFVNSRWRGI

Homology

[Close]

BLAST of Carg25917 vs. NCBI nr
Match: KAG6601655.1 (Receptor-like protein 56, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032415.1 putative LRR receptor-like serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 264.6 bits (675), Expect = 4.4e-67
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MVSLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLC 60
           MVSLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLC
Sbjct: 1   MVSLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLC 60

Query: 61  GVVAGKGCSSHKWRPKNQYEELMRDEEDDKINGYVDTFYWSFVASYLMVLEILLGLVMLL 120
           GVVAGKGCSSHKWRPKNQYEELMRDEEDDKINGYVDTFYWSFVASYLMVLEILLGLVMLL
Sbjct: 61  GVVAGKGCSSHKWRPKNQYEELMRDEEDDKINGYVDTFYWSFVASYLMVLEILLGLVMLL 120

Query: 121 FVNSRWRGI 130
           FVNSRWRGI
Sbjct: 121 FVNSRWRGI 129

[Close]

BLAST of Carg25917 vs. NCBI nr
Match: KAG6601708.1 (Receptor-like protein 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 229.9 bits (585), Expect = 1.2e-56
Identity = 115/129 (89.15%), Postives = 120/129 (93.02%), Query Frame = 0


Query: 1   MVSLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLC 60
           M SLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPH RTFVEGSYLGNPNLC
Sbjct: 709 MESLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHFRTFVEGSYLGNPNLC 768

Query: 61  GVVAGKGCSSHKWRPKNQYEELMRDEEDDKINGYVDTFYWSFVASYLMVLEILLGLVMLL 120
           GVVAGKGCSSHKW+P+NQYE LMRD EDDKIN YV+TFYWSFVASYLMV   LLGLV++L
Sbjct: 769 GVVAGKGCSSHKWKPRNQYEGLMRD-EDDKINEYVETFYWSFVASYLMV---LLGLVIVL 828

Query: 121 FVNSRWRGI 130
           FVN RWRGI
Sbjct: 829 FVNPRWRGI 833

[Close]

BLAST of Carg25917 vs. NCBI nr
Match: XP_022930004.1 (probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Cucurbita moschata])

HSP 1 Score: 225.7 bits (574), Expect = 2.3e-55
Identity = 113/129 (87.60%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MVSLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLC 60
           M SLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPH RTFVEGSYLGNPNLC
Sbjct: 709 MESLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHFRTFVEGSYLGNPNLC 768

Query: 61  GVVAGKGCSSHKWRPKNQYEELMRDEEDDKINGYVDTFYWSFVASYLMVLEILLGLVMLL 120
           GVVAG+GCSSHKW+P+NQYE LMRD E DKIN YV+TFYWSFVASYLMV   LLGLV++L
Sbjct: 769 GVVAGEGCSSHKWKPRNQYEGLMRD-EGDKINEYVETFYWSFVASYLMV---LLGLVIVL 828

Query: 121 FVNSRWRGI 130
           FVN RWRGI
Sbjct: 829 FVNPRWRGI 833

[Close]

BLAST of Carg25917 vs. NCBI nr
Match: XP_022994103.1 (probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Cucurbita maxima])

HSP 1 Score: 224.9 bits (572), Expect = 3.9e-55
Identity = 115/129 (89.15%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MVSLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLC 60
           M SLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPH RTFVEGSYLGNPNLC
Sbjct: 541 MESLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHFRTFVEGSYLGNPNLC 600

Query: 61  GVVAGKGCSSHKWRPKNQYEELMRDEEDDKINGYVDTFYWSFVASYLMVLEILLGLVMLL 120
           GVVAGKGCSS K RP+NQYEELMRD EDDKIN YV+TFYWSFVASYLMV   LLGLV++L
Sbjct: 601 GVVAGKGCSSPKGRPRNQYEELMRD-EDDKINEYVETFYWSFVASYLMV---LLGLVIVL 660

Query: 121 FVNSRWRGI 130
           FVN RWRGI
Sbjct: 661 FVNPRWRGI 665

[Close]

BLAST of Carg25917 vs. NCBI nr
Match: XP_023521199.1 (LRR receptor-like serine/threonine-protein kinase FLS2, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 211.1 bits (536), Expect = 5.8e-51
Identity = 101/108 (93.52%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 1   MVSLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLC 60
           M SLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSG+IPMSPH RTFVEGSYLGNPNLC
Sbjct: 709 MESLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGIIPMSPHFRTFVEGSYLGNPNLC 768

Query: 61  GVVAGKGCSSHKWRPKNQYEELMRDEEDDKINGYVDTFYWSFVASYLM 109
           GVVAGKGCSSHKWRP+NQYEELMRD EDDKIN YV+TFYWSFVASYLM
Sbjct: 769 GVVAGKGCSSHKWRPRNQYEELMRD-EDDKINEYVETFYWSFVASYLM 815

[Close]

BLAST of Carg25917 vs. ExPASy Swiss-Prot
Match: F4K4T3 (Receptor-like protein 56 OS=Arabidopsis thaliana OX=3702 GN=RLP56 PE=2 SV=2)

HSP 1 Score: 101.3 bits (251), Expect = 8.5e-21
Identity = 58/126 (46.03%), Postives = 73/126 (57.94%), Query Frame = 0


Query: 3   SLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLCGV 62
           SLDLSYN+L G IP  L+ L  L+ FNVSYNNLSG+IP      TF E SYLGNP LCG 
Sbjct: 810 SLDLSYNMLQGSIPHQLTNLTSLAIFNVSYNNLSGIIPQGKQFNTFDENSYLGNPLLCGP 869

Query: 63  VAGKGCSSHKWRPKNQYEELMRDEEDDK-INGYVDTFYWSFVASYLMVLEILLGLVMLLF 122
                C +     KN  E     EEDDK +   +  FYWS   +Y+     L+G+++L+ 
Sbjct: 870 PTDTSCET----KKNSEENANGGEEDDKEVAIDMLVFYWSTAGTYVTA---LIGILVLMC 928

Query: 123 VNSRWR 128
           V+  WR
Sbjct: 930 VDCSWR 928

[Close]

BLAST of Carg25917 vs. ExPASy Swiss-Prot
Match: Q9LNV9 (Receptor-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RLP1 PE=2 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-18
Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = 0


Query: 3    SLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLCGV 62
            SLDLS N L G IP  L+ L+ L + N+SYNNLSG IP   HL TF E SY+GN +LCG+
Sbjct: 930  SLDLSNNKLDGSIPPALADLNSLGYLNISYNNLSGEIPFKGHLVTFDERSYIGNAHLCGL 989

Query: 63   VAGKGCSSHKWRPKNQYEELMRDEEDDKINGYVDT--FYWSFVASYLMVLEILLGLVMLL 122
               K C S +           ++EE+++    +D   FYW+  A Y   +   L L   L
Sbjct: 990  PTNKNCISQRVPEPPSVSTHAKEEENEEEGNVIDMVWFYWTCAAVY---ISTSLALFAFL 1049

Query: 123  FVNSRW 127
            +++SRW
Sbjct: 1050 YIDSRW 1052

[Close]

BLAST of Carg25917 vs. ExPASy Swiss-Prot
Match: Q9C6A6 (Receptor-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=RLP13 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.3e-18
Identity = 53/124 (42.74%), Postives = 72/124 (58.06%), Query Frame = 0


Query: 3    SLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLCGV 62
            SLDLS+N L G IP  L+ +  L+ FNVSYNNLSG++P      TF   SY GNP LCG 
Sbjct: 899  SLDLSFNRLQGPIPLQLTDMISLAVFNVSYNNLSGIVPQGRQFNTFETQSYFGNPLLCGK 958

Query: 63   VAGKGCSSHKWRPKNQYEELMRDEEDDKINGYVDTFYWSFVASYLMVLEILLGLVMLLFV 122
                 C+S+ + P +         E D+    +++FYWSFVA+Y   + ILLG++  L  
Sbjct: 959  SIDISCASNNFHPTD------NGVEADESTVDMESFYWSFVAAY---VTILLGILASLSF 1013

Query: 123  NSRW 127
            +S W
Sbjct: 1019 DSPW 1013

[Close]

BLAST of Carg25917 vs. ExPASy Swiss-Prot
Match: F4HTV4 (Receptor-like protein 14 OS=Arabidopsis thaliana OX=3702 GN=RLP14 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.0e-18
Identity = 52/127 (40.94%), Postives = 71/127 (55.91%), Query Frame = 0


Query: 3   SLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLCGV 62
           SLDLSYN+L G IP  L+ L  L+ FNVS+NNLSG+IP      TF + SYLGNP LCG 
Sbjct: 835 SLDLSYNMLQGNIPHQLTNLTSLAVFNVSFNNLSGIIPQGGQFNTFNDNSYLGNPLLCGT 894

Query: 63  VAGKGCSSHKWRPKNQYEELMRDEEDDKINGYVD--TFYWSFVASYLMVLEILLGLVMLL 122
              + C   K   K        +EEDD     +D    YW+  ++Y +    L+G+++L+
Sbjct: 895 PTDRSCEGKK-NTKEADNGGEEEEEDDDDEAAIDMVVLYWTTGSTYAIA---LIGILVLM 954

Query: 123 FVNSRWR 128
             +  WR
Sbjct: 955 CFDCPWR 957

[Close]

BLAST of Carg25917 vs. ExPASy Swiss-Prot
Match: Q9SKK2 (Receptor like protein 21 OS=Arabidopsis thaliana OX=3702 GN=RLP21 PE=3 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 3.3e-17
Identity = 52/125 (41.60%), Postives = 74/125 (59.20%), Query Frame = 0


Query: 3   SLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLCGV 62
           SLDLS+N+L G IP  LS L  L+ F+VS NNLSG+IP      TF E SYLGNP LCG 
Sbjct: 841 SLDLSHNMLQGSIPQLLSSLTSLAVFDVSSNNLSGIIPQGRQFNTFEEESYLGNPLLCGP 900

Query: 63  VAGKGCSSHKWRPKNQYEELMRDEEDDKINGYVDTFYWSFVASYLMVLEILLGLVMLLFV 122
              + C ++K     +  +  ++EEDDK    +  FY+S  + Y+     L+G+++L+  
Sbjct: 901 PTSRSCETNK---SPEEADNGQEEEDDKAAIDMMVFYFSTASIYVTA---LIGVLVLMCF 959

Query: 123 NSRWR 128
           +  WR
Sbjct: 961 DCPWR 959

[Close]

BLAST of Carg25917 vs. ExPASy TrEMBL
Match: A0A6J1EQE1 (probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Cucurbita moschata OX=3662 GN=LOC111436446 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.1e-55
Identity = 113/129 (87.60%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MVSLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLC 60
           M SLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPH RTFVEGSYLGNPNLC
Sbjct: 709 MESLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHFRTFVEGSYLGNPNLC 768

Query: 61  GVVAGKGCSSHKWRPKNQYEELMRDEEDDKINGYVDTFYWSFVASYLMVLEILLGLVMLL 120
           GVVAG+GCSSHKW+P+NQYE LMRD E DKIN YV+TFYWSFVASYLMV   LLGLV++L
Sbjct: 769 GVVAGEGCSSHKWKPRNQYEGLMRD-EGDKINEYVETFYWSFVASYLMV---LLGLVIVL 828

Query: 121 FVNSRWRGI 130
           FVN RWRGI
Sbjct: 829 FVNPRWRGI 833

[Close]

BLAST of Carg25917 vs. ExPASy TrEMBL
Match: A0A6J1K476 (probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Cucurbita maxima OX=3661 GN=LOC111489930 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.9e-55
Identity = 115/129 (89.15%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MVSLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLC 60
           M SLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPH RTFVEGSYLGNPNLC
Sbjct: 541 MESLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHFRTFVEGSYLGNPNLC 600

Query: 61  GVVAGKGCSSHKWRPKNQYEELMRDEEDDKINGYVDTFYWSFVASYLMVLEILLGLVMLL 120
           GVVAGKGCSS K RP+NQYEELMRD EDDKIN YV+TFYWSFVASYLMV   LLGLV++L
Sbjct: 601 GVVAGKGCSSPKGRPRNQYEELMRD-EDDKINEYVETFYWSFVASYLMV---LLGLVIVL 660

Query: 121 FVNSRWRGI 130
           FVN RWRGI
Sbjct: 661 FVNPRWRGI 665

[Close]

BLAST of Carg25917 vs. ExPASy TrEMBL
Match: A0A6J1D4Z7 (probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Momordica charantia OX=3673 GN=LOC111016992 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 9.1e-34
Identity = 77/128 (60.16%), Postives = 96/128 (75.00%), Query Frame = 0


Query: 3   SLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLCGV 62
           SLDLSYN L+G IPS LS+LDFLSFFNVSYNNLSG+IP+SPH +TF+E SYLGNPNLCG 
Sbjct: 726 SLDLSYNFLNGDIPSKLSELDFLSFFNVSYNNLSGMIPISPHFKTFLESSYLGNPNLCGP 785

Query: 63  VAGKGCSSH-KWRPKNQYEELMRDEEDDKINGYVDTFYWSFVASYLMVLEILLGLVMLLF 122
           + G+ CS   K  P N+Y +    +ED ++  YV+ FYWSF+ SY     ILLGL ++LF
Sbjct: 786 LVGRDCSGRFKLTPNNRYNDF--GDEDGRVI-YVEGFYWSFIVSY---FTILLGLFIVLF 845

Query: 123 VNSRWRGI 130
           +N RWR +
Sbjct: 846 INPRWRNV 847

[Close]

BLAST of Carg25917 vs. ExPASy TrEMBL
Match: A0A1S3CFZ2 (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Cucumis melo OX=3656 GN=LOC103500019 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.4e-23
Identity = 67/125 (53.60%), Postives = 82/125 (65.60%), Query Frame = 0


Query: 3    SLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLCGV 62
            SLDLS NLLSG IPS L+ LD LS FNVSYNNLSG+IP +PH  T+ E S+ GNPNLCG 
Sbjct: 932  SLDLSNNLLSGHIPSELATLDCLSIFNVSYNNLSGMIPTAPHF-TYPESSFYGNPNLCGS 991

Query: 63   VAGKGCSSHKWRPKNQYEELMRDEEDDKINGYVDTFYWSFVASYLMVLEILLGLVMLLFV 122
                 CSSH     NQY  L  +EE D     ++ F+WSF  SY   + +LLG V++L +
Sbjct: 992  YIEHKCSSHALPTDNQYTNL--EEEADGTFFDLEAFFWSFGTSY---ITLLLGFVVVLCI 1050

Query: 123  NSRWR 128
            N +WR
Sbjct: 1052 NPQWR 1050

[Close]

BLAST of Carg25917 vs. ExPASy TrEMBL
Match: A0A396HZS4 (Putative non-specific serine/threonine protein kinase OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr4g0006861 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.9e-23
Identity = 66/125 (52.80%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 3   SLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLCGV 62
           SLDLSYN LSG IP  L+QL FLS FNVSYNNLSG  P +    TFVE SY GNP LCG 
Sbjct: 881 SLDLSYNNLSGKIPYELTQLTFLSTFNVSYNNLSGTPPSTGQFATFVEDSYRGNPGLCGS 940

Query: 63  VAGKGCSSHKWRPKNQYEELMRDEEDDKINGYVDTFYWSFVASYLMVLEILLGLVMLLFV 122
           +  + C   K  P +Q      D E+++ N  + TFYWSF ASY   + ILL  V +L +
Sbjct: 941 LLDRKCEGVKSSPSSQ----SNDNEEEETNVDMITFYWSFTASY---ITILLAFVTVLCI 998

Query: 123 NSRWR 128
           N+RWR
Sbjct: 1001 NARWR 998

[Close]

BLAST of Carg25917 vs. TAIR 10
Match: AT5G49290.1 (receptor like protein 56 )

HSP 1 Score: 101.3 bits (251), Expect = 6.0e-22
Identity = 58/126 (46.03%), Postives = 73/126 (57.94%), Query Frame = 0


Query: 3   SLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLCGV 62
           SLDLSYN+L G IP  L+ L  L+ FNVSYNNLSG+IP      TF E SYLGNP LCG 
Sbjct: 771 SLDLSYNMLQGSIPHQLTNLTSLAIFNVSYNNLSGIIPQGKQFNTFDENSYLGNPLLCGP 830

Query: 63  VAGKGCSSHKWRPKNQYEELMRDEEDDK-INGYVDTFYWSFVASYLMVLEILLGLVMLLF 122
                C +     KN  E     EEDDK +   +  FYWS   +Y+     L+G+++L+ 
Sbjct: 831 PTDTSCET----KKNSEENANGGEEDDKEVAIDMLVFYWSTAGTYVTA---LIGILVLMC 889

Query: 123 VNSRWR 128
           V+  WR
Sbjct: 891 VDCSWR 889

[Close]

BLAST of Carg25917 vs. TAIR 10
Match: AT1G07390.1 (receptor like protein 1 )

HSP 1 Score: 94.0 bits (232), Expect = 9.6e-20
Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = 0


Query: 3    SLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLCGV 62
            SLDLS N L G IP  L+ L+ L + N+SYNNLSG IP   HL TF E SY+GN +LCG+
Sbjct: 887  SLDLSNNKLDGSIPPALADLNSLGYLNISYNNLSGEIPFKGHLVTFDERSYIGNAHLCGL 946

Query: 63   VAGKGCSSHKWRPKNQYEELMRDEEDDKINGYVDT--FYWSFVASYLMVLEILLGLVMLL 122
               K C S +           ++EE+++    +D   FYW+  A Y   +   L L   L
Sbjct: 947  PTNKNCISQRVPEPPSVSTHAKEEENEEEGNVIDMVWFYWTCAAVY---ISTSLALFAFL 1006

Query: 123  FVNSRW 127
            +++SRW
Sbjct: 1007 YIDSRW 1009

[Close]

BLAST of Carg25917 vs. TAIR 10
Match: AT1G07390.2 (receptor like protein 1 )

HSP 1 Score: 94.0 bits (232), Expect = 9.6e-20
Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = 0


Query: 3   SLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLCGV 62
           SLDLS N L G IP  L+ L+ L + N+SYNNLSG IP   HL TF E SY+GN +LCG+
Sbjct: 766 SLDLSNNKLDGSIPPALADLNSLGYLNISYNNLSGEIPFKGHLVTFDERSYIGNAHLCGL 825

Query: 63  VAGKGCSSHKWRPKNQYEELMRDEEDDKINGYVDT--FYWSFVASYLMVLEILLGLVMLL 122
              K C S +           ++EE+++    +D   FYW+  A Y   +   L L   L
Sbjct: 826 PTNKNCISQRVPEPPSVSTHAKEEENEEEGNVIDMVWFYWTCAAVY---ISTSLALFAFL 885

Query: 123 FVNSRW 127
           +++SRW
Sbjct: 886 YIDSRW 888

[Close]

BLAST of Carg25917 vs. TAIR 10
Match: AT1G07390.3 (receptor like protein 1 )

HSP 1 Score: 94.0 bits (232), Expect = 9.6e-20
Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = 0


Query: 3    SLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLCGV 62
            SLDLS N L G IP  L+ L+ L + N+SYNNLSG IP   HL TF E SY+GN +LCG+
Sbjct: 936  SLDLSNNKLDGSIPPALADLNSLGYLNISYNNLSGEIPFKGHLVTFDERSYIGNAHLCGL 995

Query: 63   VAGKGCSSHKWRPKNQYEELMRDEEDDKINGYVDT--FYWSFVASYLMVLEILLGLVMLL 122
               K C S +           ++EE+++    +D   FYW+  A Y   +   L L   L
Sbjct: 996  PTNKNCISQRVPEPPSVSTHAKEEENEEEGNVIDMVWFYWTCAAVY---ISTSLALFAFL 1055

Query: 123  FVNSRW 127
            +++SRW
Sbjct: 1056 YIDSRW 1058

[Close]

BLAST of Carg25917 vs. TAIR 10
Match: AT1G74170.1 (receptor like protein 13 )

HSP 1 Score: 93.2 bits (230), Expect = 1.6e-19
Identity = 53/124 (42.74%), Postives = 72/124 (58.06%), Query Frame = 0


Query: 3   SLDLSYNLLSGGIPSNLSQLDFLSFFNVSYNNLSGVIPMSPHLRTFVEGSYLGNPNLCGV 62
           SLDLS+N L G IP  L+ +  L+ FNVSYNNLSG++P      TF   SY GNP LCG 
Sbjct: 831 SLDLSFNRLQGPIPLQLTDMISLAVFNVSYNNLSGIVPQGRQFNTFETQSYFGNPLLCGK 890

Query: 63  VAGKGCSSHKWRPKNQYEELMRDEEDDKINGYVDTFYWSFVASYLMVLEILLGLVMLLFV 122
                C+S+ + P +         E D+    +++FYWSFVA+Y   + ILLG++  L  
Sbjct: 891 SIDISCASNNFHPTD------NGVEADESTVDMESFYWSFVAAY---VTILLGILASLSF 945

Query: 123 NSRW 127
           +S W
Sbjct: 951 DSPW 945

The following BLAST results are available for this feature:

BLAST of Carg25917 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601655.1	4.4e-67	100.00	Receptor-like protein 56, partial [Cucurbita argyrosperma subsp. sororia] >KAG70...	[more]
KAG6601708.1	1.2e-56	89.15	Receptor-like protein 13, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022930004.1	2.3e-55	87.60	probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Cucurbita ...	[more]
XP_022994103.1	3.9e-55	89.15	probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Cucurbita ...	[more]
XP_023521199.1	5.8e-51	93.52	LRR receptor-like serine/threonine-protein kinase FLS2, partial [Cucurbita pepo ...	[more]

BLAST of Carg25917 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4K4T3	8.5e-21	46.03	Receptor-like protein 56 OS=Arabidopsis thaliana OX=3702 GN=RLP56 PE=2 SV=2	[more]
Q9LNV9	1.4e-18	41.27	Receptor-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RLP1 PE=2 SV=2	[more]
Q9C6A6	2.3e-18	42.74	Receptor-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=RLP13 PE=3 SV=1	[more]
F4HTV4	3.0e-18	40.94	Receptor-like protein 14 OS=Arabidopsis thaliana OX=3702 GN=RLP14 PE=3 SV=1	[more]
Q9SKK2	3.3e-17	41.60	Receptor like protein 21 OS=Arabidopsis thaliana OX=3702 GN=RLP21 PE=3 SV=2	[more]

BLAST of Carg25917 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EQE1	1.1e-55	87.60	probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Cucurbit...	[more]
A0A6J1K476	1.9e-55	89.15	probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Cucurbit...	[more]
A0A6J1D4Z7	9.1e-34	60.16	probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Momordic...	[more]
A0A1S3CFZ2	1.4e-23	53.60	LRR receptor-like serine/threonine-protein kinase GSO2 OS=Cucumis melo OX=3656 G...	[more]
A0A396HZS4	1.9e-23	52.80	Putative non-specific serine/threonine protein kinase OS=Medicago truncatula OX=...	[more]

BLAST of Carg25917 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49290.1	6.0e-22	46.03	receptor like protein 56	[more]
AT1G07390.1	9.6e-20	41.27	receptor like protein 1	[more]
AT1G07390.2	9.6e-20	41.27	receptor like protein 1	[more]
AT1G07390.3	9.6e-20	41.27	receptor like protein 1	[more]
AT1G74170.1	1.6e-19	42.74	receptor like protein 13	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 1..75 e-value: 1.1E-23 score: 85.2
None	No IPR available	PANTHER	PTHR27004:SF388	LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN	coord: 3..117
None	No IPR available	PANTHER	PTHR27004	RECEPTOR-LIKE PROTEIN 12 ISOFORM X1	coord: 3..117
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 2..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25917-RA	Carg25917-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016301	kinase activity