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Carg25872 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGACATCCTTAAGAGAGGTTTCGCCCAGCCAAATATCCTTCCCGAAACTAATCCTATGCTCATTTCCAACTTTGAATCTATCAAAATTTCGTACAGGGGGCGAATTTTGCAATACCACATCTGGGCTGGTTGTATGAGCGACCTTTATGATGAGATGACACACATCCTAGGGGTTTTTCCCCATAGATACTAGCCACCTCCTACCTTGACAAAGCATTTCTTTCAGTTGGAAACCTCCAAAACCATTTAGTTAGGAGCACTGCATTTCTATGCTTGAGATACCCTATGACCTTGTATTATTTCATTTTCCCGATGAAAGTTGTTTTTCTTAAAAAAGAACACAATGATTAGAATATAATTGAGTTACAGCTGTAGCTATGGGTGCTCCAGATAATCTAGTAAGGAAGTGATTAACCAGATCTAATGAGTGAGTGAGTGATTAACTCTCAAGTGTTCTTGAAAGTAGCAAATTTTTCCTATAGAACGTCTGCATACAAGGGGATTCGATTGAAGCTTACAACAATTCCTGTGTATTGAGTTCGTTAGCTCATTTCCTATTGAGTTTGGGAAGATGATAGGATAACAAGATGGACCTAATTACTGCTAGACCTTATTACTGCTTGTAGTCTTCTTTTCTTTCTCTCAGTTATTTCATTTTGTTATCTACCATAGGTTGGTCTAATGGTCAATAAGAGCCATTGTAAAAAATAAAAACTGAGGAATGAGTTGAAATCATGATGGACACTTGGATTTAATATCCAATGAGCTATCTTGAGGGTGAAGTGAGATTAGTCGAGGCACATACTAGATTGGACACTCTGCACAAAGAGAAAAAAGAATTTGTTCCATTTAGTTGAAGTGCTTACATGGATTAATAAAATCACCTAGAGATGAAAATGTTCTCTAGTCCGGCCAGAGTGTTTATGCAACATGATTACTGTTAAATATGCATATAGATTTTCTCGTTCTGTAAGCAATTGATTGGATGTGATTACTGCACGATTAACTTGATCTTTGTGCATATAGGATCTCTCTAGTCCTGTTTTATCTGCTGTTGGAGAGCGTTATTATAAGGTTACTGCTGAAGCATTGAGAGTATGTGGGGAACTTGTTCGGGTTGTTCGTCCTGGTATTGAGGTGAGTTCAAGTTCCACTTTAAATGTAGAACTGTAG ATGGAAGACATCCTTAAGAGAGGTTTCGCCCAGCCAAATATCCTTCCCGAAACTAATCCTATGCTCATTTCCAACTTTGAATCTATCAAAATTTCGTACAGGGGGCGAATTTTGCAATACCACATCTGGGCTGGTTGTATGAGCGACCTTTATGATGAGATGACACACATCCTAGGGGATCTCTCTAGTCCTGTTTTATCTGCTGTTGGAGAGCGTTATTATAAGGTTACTGCTGAAGCATTGAGAGTATGTGGGGAACTTGTTCGGGTTGTTCGTCCTGGTATTGAGGTGAGTTCAAGTTCCACTTTAAATGTAGAACTGTAG ATGGAAGACATCCTTAAGAGAGGTTTCGCCCAGCCAAATATCCTTCCCGAAACTAATCCTATGCTCATTTCCAACTTTGAATCTATCAAAATTTCGTACAGGGGGCGAATTTTGCAATACCACATCTGGGCTGGTTGTATGAGCGACCTTTATGATGAGATGACACACATCCTAGGGGATCTCTCTAGTCCTGTTTTATCTGCTGTTGGAGAGCGTTATTATAAGGTTACTGCTGAAGCATTGAGAGTATGTGGGGAACTTGTTCGGGTTGTTCGTCCTGGTATTGAGGTGAGTTCAAGTTCCACTTTAAATGTAGAACTGTAG MEDILKRGFAQPNILPETNPMLISNFESIKISYRGRILQYHIWAGCMSDLYDEMTHILGDLSSPVLSAVGERYYKVTAEALRVCGELVRVVRPGIEVSSSSTLNVEL Homology
BLAST of Carg25872 vs. NCBI nr
Match: KAG7031343.1 (Cullin-associated NEDD8-dissociated protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 217.6 bits (553), Expect = 5.1e-53 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of Carg25872 vs. NCBI nr
Match: XP_022942398.1 (cullin-associated NEDD8-dissociated protein 1-like [Cucurbita moschata] >XP_022942399.1 cullin-associated NEDD8-dissociated protein 1-like [Cucurbita moschata]) HSP 1 Score: 75.5 bits (184), Expect = 3.1e-10 Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0
BLAST of Carg25872 vs. NCBI nr
Match: KAG6577353.1 (Cullin-associated NEDD8-dissociated protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 75.5 bits (184), Expect = 3.1e-10 Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0
BLAST of Carg25872 vs. NCBI nr
Match: XP_023530859.1 (cullin-associated NEDD8-dissociated protein 1-like [Cucurbita pepo subsp. pepo] >XP_023530869.1 cullin-associated NEDD8-dissociated protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 75.5 bits (184), Expect = 3.1e-10 Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0
BLAST of Carg25872 vs. NCBI nr
Match: XP_004133735.1 (cullin-associated NEDD8-dissociated protein 1 [Cucumis sativus] >XP_011650579.1 cullin-associated NEDD8-dissociated protein 1 [Cucumis sativus]) HSP 1 Score: 75.5 bits (184), Expect = 3.1e-10 Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0
BLAST of Carg25872 vs. ExPASy Swiss-Prot
Match: Q8L5Y6 (Cullin-associated NEDD8-dissociated protein 1 OS=Arabidopsis thaliana OX=3702 GN=CAND1 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.3e-10 Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 0
BLAST of Carg25872 vs. ExPASy TrEMBL
Match: A0A6J1J9S5 (cullin-associated NEDD8-dissociated protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111482588 PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.5e-10 Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0
BLAST of Carg25872 vs. ExPASy TrEMBL
Match: A0A6J1IJ62 (cullin-associated NEDD8-dissociated protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476765 PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.5e-10 Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0
BLAST of Carg25872 vs. ExPASy TrEMBL
Match: A0A6J1EU84 (cullin-associated NEDD8-dissociated protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111435968 PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.5e-10 Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0
BLAST of Carg25872 vs. ExPASy TrEMBL
Match: A0A6J1FUQ7 (cullin-associated NEDD8-dissociated protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111447457 PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.5e-10 Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0
BLAST of Carg25872 vs. ExPASy TrEMBL
Match: A0A0A0L837 (TIP120 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G112260 PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.5e-10 Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0
BLAST of Carg25872 vs. TAIR 10
Match: AT2G02560.1 (cullin-associated and neddylation dissociated ) HSP 1 Score: 65.9 bits (159), Expect = 2.3e-11 Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 0
BLAST of Carg25872 vs. TAIR 10
Match: AT2G02560.2 (cullin-associated and neddylation dissociated ) HSP 1 Score: 65.9 bits (159), Expect = 2.3e-11 Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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