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Carg25871 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAACGGATAATATCTCTTGGCATCGTAGCCGTGCAGTTGGATATCGTTTTGGACCACATCTTGGGGACACTGTTCCTGTGCTTATCAATTATTGCACAAGTGCTTCTGAAAGTGATGAGGAGCTTCGTGAGTACAGTTTACAGGTCCTTAATCTTCTCACTTTTGTTGGTTAAAAACTTGCACACTACCAAATTCAGTTTGTACAATAGAACCTTGATGCCTCTCGTATATTGCTAAAGTGGAATTCTGATTGCAGGCTCTAGAAAGTTTTCTTCTAAGGTGCCCCAGGGATATTTCATCTTATTGTGATGACATTCTTCATCTTACCTTGGAGTATTTAAGTTATGATCCAAATTTCACTGATAACATGGAAGAAGATATGGATGACGAAAGTCATGAAGAAGAGGAAGAGGAGTAACATATATTCTTTTTGGACTTCTTGAATTTTATTAATGTTTATATTGTCCATTTGTGGCAGAAATACAAATTTGATGTATTACTGATGCTATCTTGCAGTGAAAGCGCCAATGAGTATACAGATGATGAAGATCTCAGCTGGAAAGTTCGACGAGCAGCTGCTAAGTGCTTGTCAACATTAATTGTATCGCGGCCAGAGATGCTTTCAAAACTATATGAGGAGGTGCTTTCTTAAACTTTTTGTGGAGGCTAAATTATGTGTCTTCATCCTTCCAGTTGATCGCCAATTGACCTAACGATGTTGTTTGTTTCTGAACTTTGAACTAACTGTAGTTTTCTTGGTCTAATGTTTAGAGAAGTAATTTGTTCTTGAATGGTTTATATTGAAATTTGTTCTTGTAGTTTTCTTGGTCTAATGTTTAGAGAAGTAATCTGTGGAAAGAAAGAAATCAGAGAATATTTGCAGAAATGACACAGACTTACACAAAACTTTTCGACAACGTTGTTTACCAAGCTATATCTTGGTGTAAACTGTCTAATATTTTTACTTCCTATAGTTATACCTCCCTCATTGCAAATTGGGAAGGTCTTTTGTAAACATCATGGATTATACATCCCTCTTGTAAATTTCACTCATCAATGAAATTGTCTCTTATCAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAATTTGTTTTTATTGTCTGCTTATGTTCAAGTTATTCTTACTTTGGCAGGCTTGTCTAAAATTGATCGATAGATTTAAAGAGAGGGAGGAAAATGTCAAGGTAGTGGGTACATCATATTTCAGATTTAAATACTCAGTTGCACCATTAATGAATGTTTACTGTGTGTACGCAGATGGATGTATTTAGTACTTTTATTGAACTGTTGCGGCAAACTGGAAATGTAACAAAAGGGCAAGTTGACATGAATGAATCGAGGCAAGTTCTTTTGATCCTTAAAGGTTTTTGGTTCATTTGCACCGTGGCTTCGTTGTGGGGTTTTTTTTGTGCCCTGTCTGTAACAGTTCAATATTTTGTATGAAACCATATTTTCATGGAGCAAACGGAAGTATACAGAAATAAGCAAAACAAAGGAAAAGGCCCTAAACACATGTTTTCGATGCCATATTTAGTTCATTTGCACCTTGGCTTGGTTGGAGATTTTGATCACTGTCTGCAACAGTTCAATATTTGGTGCGAAGCCTTATTTTCATAGAGTAAATGAAGGGATATAGAATGATCAAAACAAAGGAAAAGACTAAACAAAAAGAGTTAAAGGAAAAAACAGCGAAGACAGGAGCCTAAAAATATTACTAAAAAGGCTGTAATTGAAAAATAGAGAAAAGATCAGTACAAACGGGTCACAGACACCCTAAGGAAGGTGTTAAGATCTATAGCTGAGATGACCGAGGATGTAATATTGTCGGTACCTTTTAGGAAGAAGCTAATGATCATGATCCTTGTGACTTTTTTTTCCCCCTTACATTGAGAATACCAACCGTCATAAAATGGAATGAATGGTGCAAAATATTTTCAAAAGGGATAATGTATTGATGCTGGCATTCTTTCATTTTTTCCTCAATGAAAGTTTGATTTCTTAAATGAAGTGTTGCAATTTAAATTGTCTCTAAACAAAACTAGAGAGCTTAGGAATTATTTCAGAAAATTGAAACGAAGGATTTCATTCAATCCCTTCATGACGCTAGTATTTCTCTATTAGCAATCAATCCAAAAATTAGATATAACAGAGGATTCAGTAGGGTTTCAAAACTTATGTTTCAATGTCTTCCTGTGTCATTGAACTTCTTCTTTGTGGGGCAACATGAAGAGCATCACTTGGAACCATTGTTTTCAAGGCGCCCTTGGGTTATCACCATGGTGTGGGGTGATGCAAGGTGCATGTCCCGCATATGAATGTTATCTAAGGCGAGCACGTTCAATAAGGTGCTCGCCTTTTTCACTTTTTAGTCGCTTTGAACATATGTTCATGGTGTACAAGCACTATCCTCACTCATGTTGAGAGGAAATCTTGTGAGCCATATCTTTCCTTGATGAAAGGAACTGAGACTATTTAATATGAACTCTTGGAAATCTCCAAAGCCATTTTACTAATAATAAAAAATTGGCCTTAATGCATATTGTTTAGAGATTTCAGTAGGGTTGAACATTTCTCTAAGTTATTCTCGTTTACCGTCATAAGCTTTGGTGTTTGTTTGGCTAGGAATAGAGTGCAGATTTACAGTGGAGGAGGTCATTGTGTGTTTGCCCTTTCATGATAAGGTTGGATTTTTGACAAGCTTGTTTCTTTGTGGAACTTCTGATTGAGAGACAATAAATTTTTTAGGGATTTTGAGGGATTATGAGAAGAGGTTTGGTCTCTTGTTAGGTCCAATGCTTCTATTTGGATGTTTGTTTCCAAAGATTTTTGTAGTTACTAGCTAGGTCTTATCATTTTGTATTGGACCCCATTTTCGTACTATTTGCCTCCTTTTGGTGGGCTATCCTTTTGAATGGTTCTTACTTGCACTTTTGTATTATTTCAGTTTTTTTGATGAAAGCTTGATTTTTAGTTAAAAAAGAATAGTTAGGGTTTAAAATATAGGGTTTTCTTATGTCCAAGACTATTATCTGCAACTTAAAATATAGAGTTCAATTTTTATTAATTCAAAATTTTAAATTCAAATTTTTATTTTTGAATAAAATGTATAACTCGGAATTATTTTTTTAGGTGCGGTAAACCTCATGAAATATTAGCCTGTTTAGCTTACTATTTATTTGCATCTTTTCAGCCATTGACCATAATCACAATAATATGGTAGTTTCAATCGGTTCAACCTGTAATGGGATCTCTAAGTTCCTGTTTTGAAGCATCTGTATAGCCCTTCCGTTTTGTATTTCAGAATTGATATTCGTGATTTATGAAATTTTCTTCCTTCCATTACATAACCTGGTCCTTATTAGTTTTCTTCTTTCTCAAAAAAAAAAAAAGAAAAAGAAAAGAAAAAGAAAAAGAAAAAAAGAGCTATTTCTATTCATTTGTTGGAAATTGTATGCAGTCCTAGGTGGTTGTTAAAACAAGAAGTGCCAAAGATTGTGAAATCTATAAATAGGCAGCTACGAGAGAAATCTATCAAGACAAAGGTAAAGAAATTGTTGGTGGAACTTCTTGATTTAGTATGCTCCGTGGTGACTTTTATACTCTGATACTCTCTAGGTTGGTGCATTTTCTGTCTTGAAAGAGCTTGTGGTTGTCTTGCCAGATTGTCTTGCTGATCACATAGGATCGCTCATTCCAGGAATTGAAAAAGCATTAAGTGTATGCACTATCATCTTCTGCTGCTTTGCATACAAGTTCTAGCAATTGATGTTTAGCTGTTGTGATGACACCGTTCTTTTCCTTCCCTTATTCTATTATGGCTTTTCTTTCTGAACTTTGCAGGAAAAACTATCTACCTCAAACTTGAAGATAGAAGCTCTTATTTTCACGAGATTGGTGTTGGCTTCAAATTCTCCTTTGGTTTTTCATCCTTATATCAAGGTAACAAGAAAAATAGTTACCTCGGTAAATTACACTGTAGCATATTGAATTTTTTAATTTTTTTTCAGCGAATATAG ATGCTAACGGATAATATCTCTTGGCATCGTAGCCGTGCAGTTGGATATCGTTTTGGACCACATCTTGGGGACACTGTTCCTGTGCTTATCAATTATTGCACAAGTGCTTCTGAAAGTGATGAGGAGCTTCGTGAGTACAGTTTACAGGCTCTAGAAAGTTTTCTTCTAAGGTGCCCCAGGGATATTTCATCTTATTGTGATGACATTCTTCATCTTACCTTGGAGTATTTAAGTTATGATCCAAATTTCACTGATAACATGGAAGAAGATATGGATGACGAAAGTCATGAAGAAGAGGAAGAGGATGAAAGCGCCAATGAGTATACAGATGATGAAGATCTCAGCTGGAAAGTTCGACGAGCAGCTGCTAAGTGCTTGTCAACATTAATTGTATCGCGGCCAGAGATGCTTTCAAAACTATATGAGGAGATGGATGTATTTAGTACTTTTATTGAACTGTTGCGGCAAACTGGAAATGTAACAAAAGGGCAAGTTGACATGAATGAATCGAGGCAAGTTGGTGCATTTTCTGTCTTGAAAGAGCTTGTGGTTGTCTTGCCAGATTGTCTTGCTGATCACATAGGATCGCTCATTCCAGGAATTGAAAAAGCATTAAGTGAAAAACTATCTACCTCAAACTTGAAGATAGAAGCTCTTATTTTCACGAGATTGGTGTTGGCTTCAAATTCTCCTTTGGTTTTTCATCCTTATATCAAGCGAATATAG ATGCTAACGGATAATATCTCTTGGCATCGTAGCCGTGCAGTTGGATATCGTTTTGGACCACATCTTGGGGACACTGTTCCTGTGCTTATCAATTATTGCACAAGTGCTTCTGAAAGTGATGAGGAGCTTCGTGAGTACAGTTTACAGGCTCTAGAAAGTTTTCTTCTAAGGTGCCCCAGGGATATTTCATCTTATTGTGATGACATTCTTCATCTTACCTTGGAGTATTTAAGTTATGATCCAAATTTCACTGATAACATGGAAGAAGATATGGATGACGAAAGTCATGAAGAAGAGGAAGAGGATGAAAGCGCCAATGAGTATACAGATGATGAAGATCTCAGCTGGAAAGTTCGACGAGCAGCTGCTAAGTGCTTGTCAACATTAATTGTATCGCGGCCAGAGATGCTTTCAAAACTATATGAGGAGATGGATGTATTTAGTACTTTTATTGAACTGTTGCGGCAAACTGGAAATGTAACAAAAGGGCAAGTTGACATGAATGAATCGAGGCAAGTTGGTGCATTTTCTGTCTTGAAAGAGCTTGTGGTTGTCTTGCCAGATTGTCTTGCTGATCACATAGGATCGCTCATTCCAGGAATTGAAAAAGCATTAAGTGAAAAACTATCTACCTCAAACTTGAAGATAGAAGCTCTTATTTTCACGAGATTGGTGTTGGCTTCAAATTCTCCTTTGGTTTTTCATCCTTATATCAAGCGAATATAG MLTDNISWHRSRAVGYRFGPHLGDTVPVLINYCTSASESDEELREYSLQALESFLLRCPRDISSYCDDILHLTLEYLSYDPNFTDNMEEDMDDESHEEEEEDESANEYTDDEDLSWKVRRAAAKCLSTLIVSRPEMLSKLYEEMDVFSTFIELLRQTGNVTKGQVDMNESRQVGAFSVLKELVVVLPDCLADHIGSLIPGIEKALSEKLSTSNLKIEALIFTRLVLASNSPLVFHPYIKRI Homology
BLAST of Carg25871 vs. NCBI nr
Match: KAG7031342.1 (Cullin-associated NEDD8-dissociated protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 473.0 bits (1216), Expect = 1.5e-129 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0
BLAST of Carg25871 vs. NCBI nr
Match: XP_022942398.1 (cullin-associated NEDD8-dissociated protein 1-like [Cucurbita moschata] >XP_022942399.1 cullin-associated NEDD8-dissociated protein 1-like [Cucurbita moschata]) HSP 1 Score: 410.6 bits (1054), Expect = 9.3e-111 Identity = 224/273 (82.05%), Postives = 225/273 (82.42%), Query Frame = 0
BLAST of Carg25871 vs. NCBI nr
Match: XP_023530859.1 (cullin-associated NEDD8-dissociated protein 1-like [Cucurbita pepo subsp. pepo] >XP_023530869.1 cullin-associated NEDD8-dissociated protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 410.6 bits (1054), Expect = 9.3e-111 Identity = 224/273 (82.05%), Postives = 225/273 (82.42%), Query Frame = 0
BLAST of Carg25871 vs. NCBI nr
Match: XP_022976335.1 (cullin-associated NEDD8-dissociated protein 1-like [Cucurbita maxima] >XP_022976341.1 cullin-associated NEDD8-dissociated protein 1-like [Cucurbita maxima]) HSP 1 Score: 410.6 bits (1054), Expect = 9.3e-111 Identity = 224/273 (82.05%), Postives = 225/273 (82.42%), Query Frame = 0
BLAST of Carg25871 vs. NCBI nr
Match: XP_008452214.1 (PREDICTED: cullin-associated NEDD8-dissociated protein 1 [Cucumis melo] >XP_008452215.1 PREDICTED: cullin-associated NEDD8-dissociated protein 1 [Cucumis melo] >XP_008452217.1 PREDICTED: cullin-associated NEDD8-dissociated protein 1 [Cucumis melo]) HSP 1 Score: 404.1 bits (1037), Expect = 8.7e-109 Identity = 220/273 (80.59%), Postives = 223/273 (81.68%), Query Frame = 0
BLAST of Carg25871 vs. ExPASy Swiss-Prot
Match: Q8L5Y6 (Cullin-associated NEDD8-dissociated protein 1 OS=Arabidopsis thaliana OX=3702 GN=CAND1 PE=1 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 4.7e-97 Identity = 190/274 (69.34%), Postives = 217/274 (79.20%), Query Frame = 0
BLAST of Carg25871 vs. ExPASy Swiss-Prot
Match: A7MBJ5 (Cullin-associated NEDD8-dissociated protein 1 OS=Bos taurus OX=9913 GN=CAND1 PE=2 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 2.2e-38 Identity = 99/282 (35.11%), Postives = 159/282 (56.38%), Query Frame = 0
BLAST of Carg25871 vs. ExPASy Swiss-Prot
Match: Q86VP6 (Cullin-associated NEDD8-dissociated protein 1 OS=Homo sapiens OX=9606 GN=CAND1 PE=1 SV=2) HSP 1 Score: 160.6 bits (405), Expect = 2.2e-38 Identity = 99/282 (35.11%), Postives = 159/282 (56.38%), Query Frame = 0
BLAST of Carg25871 vs. ExPASy Swiss-Prot
Match: Q6ZQ38 (Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus OX=10090 GN=Cand1 PE=1 SV=2) HSP 1 Score: 160.6 bits (405), Expect = 2.2e-38 Identity = 99/282 (35.11%), Postives = 159/282 (56.38%), Query Frame = 0
BLAST of Carg25871 vs. ExPASy Swiss-Prot
Match: P97536 (Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 2.2e-38 Identity = 99/282 (35.11%), Postives = 159/282 (56.38%), Query Frame = 0
BLAST of Carg25871 vs. ExPASy TrEMBL
Match: A0A0A0L837 (TIP120 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G112260 PE=3 SV=1) HSP 1 Score: 411.8 bits (1057), Expect = 2.0e-111 Identity = 222/279 (79.57%), Postives = 226/279 (81.00%), Query Frame = 0
BLAST of Carg25871 vs. ExPASy TrEMBL
Match: A0A6J1IJ62 (cullin-associated NEDD8-dissociated protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476765 PE=3 SV=1) HSP 1 Score: 410.6 bits (1054), Expect = 4.5e-111 Identity = 224/273 (82.05%), Postives = 225/273 (82.42%), Query Frame = 0
BLAST of Carg25871 vs. ExPASy TrEMBL
Match: A0A6J1FUQ7 (cullin-associated NEDD8-dissociated protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111447457 PE=3 SV=1) HSP 1 Score: 410.6 bits (1054), Expect = 4.5e-111 Identity = 224/273 (82.05%), Postives = 225/273 (82.42%), Query Frame = 0
BLAST of Carg25871 vs. ExPASy TrEMBL
Match: A0A1S3BTD2 (cullin-associated NEDD8-dissociated protein 1 OS=Cucumis melo OX=3656 GN=LOC103493300 PE=3 SV=1) HSP 1 Score: 404.1 bits (1037), Expect = 4.2e-109 Identity = 220/273 (80.59%), Postives = 223/273 (81.68%), Query Frame = 0
BLAST of Carg25871 vs. ExPASy TrEMBL
Match: A0A6J1C8K0 (cullin-associated NEDD8-dissociated protein 1 OS=Momordica charantia OX=3673 GN=LOC111008417 PE=3 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 4.7e-108 Identity = 219/273 (80.22%), Postives = 222/273 (81.32%), Query Frame = 0
BLAST of Carg25871 vs. TAIR 10
Match: AT2G02560.1 (cullin-associated and neddylation dissociated ) HSP 1 Score: 355.5 bits (911), Expect = 3.3e-98 Identity = 190/274 (69.34%), Postives = 217/274 (79.20%), Query Frame = 0
BLAST of Carg25871 vs. TAIR 10
Match: AT2G02560.2 (cullin-associated and neddylation dissociated ) HSP 1 Score: 355.5 bits (911), Expect = 3.3e-98 Identity = 190/274 (69.34%), Postives = 217/274 (79.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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