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Carg25855 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTAATGATTTTAGCTATGGATCCTTTTAAATTTTATTTACAAACTAAATTAAAAAAAACAGACGAAAGTACTTCTGGATTTGATGGCTTCTTCATCCCACATTTTGGAGGAAGAGAAAGAAGAGATAGATTCGGATGATGAATTTTTTCAAGACGGTTACCATACTATCACTAAAAAGGAAGAGATGGAATATTATTGTGCGGTCGAAGAATCCCAGGTTTATTTTCCCTTGATTTTTCACTGTTCAAACTTTTTTTTTTTTAATAAATGGGAGGATCTATGCAGGGTTTTGATGTACCAGATTTTGGTAACGTCTATGCATTTAGTCTCATCACTCCAATGAAATTGCATGAGGTCCCGGGGATGCTTAAAGAGGTTCAAATCTCAGCGAATGAAGCTATCAAACATTACAACAACGAAAAT TTAATGATTTTAGCTATGGATCCTTTTAAATTTTATTTACAAACTAAATTAAAAAAAACAGACGAAAGTACTTCTGGATTTGATGGCTTCTTCATCCCACATTTTGGAGGAAGAGAAAGAAGAGATAGATTCGGATGATGAATTTTTTCAAGACGGTTACCATACTATCACTAAAAAGGAAGAGATGGAATATTATTGTGCGGTCGAAGAATCCCAGGGTTTTGATGTACCAGATTTTGGTAACGTCTATGCATTTAGTCTCATCACTCCAATGAAATTGCATGAGGTCCCGGGGATGCTTAAAGAGGTTCAAATCTCAGCGAATGAAGCTATCAAACATTACAACAACGAAAAT ATGGCTTCTTCATCCCACATTTTGGAGGAAGAGAAAGAAGAGATAGATTCGGATGATGAATTTTTTCAAGACGGTTACCATACTATCACTAAAAAGGAAGAGATGGAATATTATTGTGCGGTCGAAGAATCCCAGGGTTTTGATGTACCAGATTTTGGTAACGTCTATGCATTTAGTCTCATCACTCCAATGAAATTGCATGAGGTCCCGGGGATGCTTAAAGAGGTTCAAATCTCAGCGAATGAAGCTATCAAACATTACAACAACGAAAAT MASSSHILEEEKEEIDSDDEFFQDGYHTITKKEEMEYYCAVEESQGFDVPDFGNVYAFSLITPMKLHEVPGMLKEVQISANEAIKHYNNEN Homology
BLAST of Carg25855 vs. NCBI nr
Match: XP_022942206.1 (uncharacterized protein LOC111447330 [Cucurbita moschata] >XP_022942207.1 uncharacterized protein LOC111447330 [Cucurbita moschata]) HSP 1 Score: 185.7 bits (470), Expect = 1.8e-43 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of Carg25855 vs. NCBI nr
Match: KAG7031327.1 (hypothetical protein SDJN02_05367, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 185.7 bits (470), Expect = 1.8e-43 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of Carg25855 vs. NCBI nr
Match: KAG6600694.1 (hypothetical protein SDJN03_05927, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 185.7 bits (470), Expect = 1.8e-43 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of Carg25855 vs. NCBI nr
Match: XP_023548353.1 (UPF0725 protein At1g02770-like [Cucurbita pepo subsp. pepo] >XP_023548361.1 UPF0725 protein At1g02770-like [Cucurbita pepo subsp. pepo] >XP_023548367.1 UPF0725 protein At1g02770-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 176.0 bits (445), Expect = 1.5e-40 Identity = 86/91 (94.51%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of Carg25855 vs. NCBI nr
Match: XP_023521680.1 (UPF0725 protein At1g02770-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 171.0 bits (432), Expect = 4.7e-39 Identity = 83/91 (91.21%), Postives = 86/91 (94.51%), Query Frame = 0
BLAST of Carg25855 vs. ExPASy TrEMBL
Match: A0A6J1FN74 (uncharacterized protein LOC111447330 OS=Cucurbita moschata OX=3662 GN=LOC111447330 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 8.9e-44 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of Carg25855 vs. ExPASy TrEMBL
Match: A0A6J1IL21 (uncharacterized protein LOC111475178 OS=Cucurbita maxima OX=3661 GN=LOC111475178 PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 1.2e-37 Identity = 81/91 (89.01%), Postives = 84/91 (92.31%), Query Frame = 0
BLAST of Carg25855 vs. ExPASy TrEMBL
Match: A0A6J1IJT3 (uncharacterized protein LOC111475320 OS=Cucurbita maxima OX=3661 GN=LOC111475320 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.4e-36 Identity = 80/91 (87.91%), Postives = 83/91 (91.21%), Query Frame = 0
BLAST of Carg25855 vs. ExPASy TrEMBL
Match: A0A6J1FPD6 (UPF0725 protein At4g29550-like OS=Cucurbita moschata OX=3662 GN=LOC111447608 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28 Identity = 65/91 (71.43%), Postives = 79/91 (86.81%), Query Frame = 0
BLAST of Carg25855 vs. ExPASy TrEMBL
Match: A0A6J1FVU0 (uncharacterized protein LOC111447329 OS=Cucurbita moschata OX=3662 GN=LOC111447329 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 4.0e-28 Identity = 65/91 (71.43%), Postives = 77/91 (84.62%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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