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Carg25691 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTATTGTTGGGTTTGGTGTAAGGAGAGCAAAGGAATTGGGAAGGTGAAGTGGCAGAGGAGGGGAAGGCGCGGCGTCCGGCACGGCATCCGGCACGGCGGCGCTGTGCAGAGGAGGATGAGGAGGCTGCAGCGCTTGATCCCCGGCGGGCGGGGGCTGAAGGCGGACCGTCTGTTGTTACAAACGGCGGACTATATAATGCAACTGAGGTCTCAAGTTGATGTTTTGCAAGCACTTACCAACATTTATGACCCTCTACTTTCTAAATATTGA ATGGAGTATTGTTGGGTTTGGTGTAAGGAGAGCAAAGGAATTGGGAAGGTGAAGTGGCAGAGGAGGGGAAGGCGCGGCGTCCGGCACGGCATCCGGCACGGCGGCGCTGTGCAGAGGAGGATGAGGAGGCTGCAGCGCTTGATCCCCGGCGGGCGGGGGCTGAAGGCGGACCGTCTGTTGTTACAAACGGCGGACTATATAATGCAACTGAGGTCTCAAGTTGATGTTTTGCAAGCACTTACCAACATTTATGACCCTCTACTTTCTAAATATTGA ATGGAGTATTGTTGGGTTTGGTGTAAGGAGAGCAAAGGAATTGGGAAGGTGAAGTGGCAGAGGAGGGGAAGGCGCGGCGTCCGGCACGGCATCCGGCACGGCGGCGCTGTGCAGAGGAGGATGAGGAGGCTGCAGCGCTTGATCCCCGGCGGGCGGGGGCTGAAGGCGGACCGTCTGTTGTTACAAACGGCGGACTATATAATGCAACTGAGGTCTCAAGTTGATGTTTTGCAAGCACTTACCAACATTTATGACCCTCTACTTTCTAAATATTGA MEYCWVWCKESKGIGKVKWQRRGRRGVRHGIRHGGAVQRRMRRLQRLIPGGRGLKADRLLLQTADYIMQLRSQVDVLQALTNIYDPLLSKY Homology
BLAST of Carg25691 vs. NCBI nr
Match: KAG7030796.1 (hypothetical protein SDJN02_04833, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 184.9 bits (468), Expect = 3.1e-43 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of Carg25691 vs. NCBI nr
Match: KAG6600126.1 (hypothetical protein SDJN03_05359, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 146.4 bits (368), Expect = 1.2e-31 Identity = 74/91 (81.32%), Postives = 77/91 (84.62%), Query Frame = 0
BLAST of Carg25691 vs. NCBI nr
Match: XP_011655641.1 (uncharacterized protein LOC105435564 [Cucumis sativus] >KGN51823.1 hypothetical protein Csa_009022 [Cucumis sativus]) HSP 1 Score: 120.2 bits (300), Expect = 9.5e-24 Identity = 63/82 (76.83%), Postives = 69/82 (84.15%), Query Frame = 0
BLAST of Carg25691 vs. NCBI nr
Match: XP_022151226.1 (transcription factor PAR2 [Momordica charantia]) HSP 1 Score: 119.0 bits (297), Expect = 2.1e-23 Identity = 68/94 (72.34%), Postives = 78/94 (82.98%), Query Frame = 0
BLAST of Carg25691 vs. NCBI nr
Match: XP_038891463.1 (transcription factor PAR2 [Benincasa hispida]) HSP 1 Score: 115.9 bits (289), Expect = 1.8e-22 Identity = 63/82 (76.83%), Postives = 68/82 (82.93%), Query Frame = 0
BLAST of Carg25691 vs. ExPASy Swiss-Prot
Match: Q7XR02 (Transcription factor IBH1 OS=Oryza sativa subsp. japonica OX=39947 GN=IBH1 PE=1 SV=2) HSP 1 Score: 44.3 bits (103), Expect = 8.7e-04 Identity = 20/45 (44.44%), Postives = 32/45 (71.11%), Query Frame = 0
BLAST of Carg25691 vs. ExPASy TrEMBL
Match: A0A0A0KQB4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G602220 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 4.6e-24 Identity = 63/82 (76.83%), Postives = 69/82 (84.15%), Query Frame = 0
BLAST of Carg25691 vs. ExPASy TrEMBL
Match: A0A6J1DDZ5 (transcription factor PAR2 OS=Momordica charantia OX=3673 GN=LOC111019200 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.0e-23 Identity = 68/94 (72.34%), Postives = 78/94 (82.98%), Query Frame = 0
BLAST of Carg25691 vs. ExPASy TrEMBL
Match: A0A6J1GYH6 (transcription factor PAR2-like OS=Cucurbita moschata OX=3662 GN=LOC111458642 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.6e-21 Identity = 58/84 (69.05%), Postives = 68/84 (80.95%), Query Frame = 0
BLAST of Carg25691 vs. ExPASy TrEMBL
Match: A0A6J1IR24 (uncharacterized protein LOC111477674 OS=Cucurbita maxima OX=3661 GN=LOC111477674 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.8e-21 Identity = 60/84 (71.43%), Postives = 67/84 (79.76%), Query Frame = 0
BLAST of Carg25691 vs. ExPASy TrEMBL
Match: A0A1S3BFE3 (uncharacterized protein LOC103489026 OS=Cucumis melo OX=3656 GN=LOC103489026 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 3.6e-21 Identity = 61/82 (74.39%), Postives = 67/82 (81.71%), Query Frame = 0
BLAST of Carg25691 vs. TAIR 10
Match: AT1G23965.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70270.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 2.8e-05 Identity = 31/77 (40.26%), Postives = 50/77 (64.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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