Carg25618 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATCCTACTCCGCTTCACTCTTCCTCGTCCTTCTCCTCCCGATCTTGGCCATCGCTCAAAACGAGAATCAAGTCGGCTCTTGGAAGCCGATTGCAGACGTGGATGATCCGCACATTCAAGAGATCGGAAAGTTCGCTGTGAAAGAGAACAACTTGGAATCCAAAAACAACTTCGTATACAAGAGGGTCGTTAGCGGCGAATCACAGGTCGCCTCTGGAATCAACTACCACCTCGTTATCGAGGTCAAGGATGGAAGTTTGGATGCGCAATATCAGGCCGTCGTGTTGGAGAAGAAATGGGAGCATTCCAAGCAGCTCGTGTCCTTCAAGCCTCTCTCCTAA ATGAAATCCTACTCCGCTTCACTCTTCCTCGTCCTTCTCCTCCCGATCTTGGCCATCGCTCAAAACGAGAATCAAGTCGGCTCTTGGAAGCCGATTGCAGACGTGGATGATCCGCACATTCAAGAGATCGGAAAGTTCGCTGTGAAAGAGAACAACTTGGAATCCAAAAACAACTTCGTATACAAGAGGGTCGTTAGCGGCGAATCACAGGTCGCCTCTGGAATCAACTACCACCTCGTTATCGAGGTCAAGGATGGAAGTTTGGATGCGCAATATCAGGCCGTCGTGTTGGAGAAGAAATGGGAGCATTCCAAGCAGCTCGTGTCCTTCAAGCCTCTCTCCTAA ATGAAATCCTACTCCGCTTCACTCTTCCTCGTCCTTCTCCTCCCGATCTTGGCCATCGCTCAAAACGAGAATCAAGTCGGCTCTTGGAAGCCGATTGCAGACGTGGATGATCCGCACATTCAAGAGATCGGAAAGTTCGCTGTGAAAGAGAACAACTTGGAATCCAAAAACAACTTCGTATACAAGAGGGTCGTTAGCGGCGAATCACAGGTCGCCTCTGGAATCAACTACCACCTCGTTATCGAGGTCAAGGATGGAAGTTTGGATGCGCAATATCAGGCCGTCGTGTTGGAGAAGAAATGGGAGCATTCCAAGCAGCTCGTGTCCTTCAAGCCTCTCTCCTAA MKSYSASLFLVLLLPILAIAQNENQVGSWKPIADVDDPHIQEIGKFAVKENNLESKNNFVYKRVVSGESQVASGINYHLVIEVKDGSLDAQYQAVVLEKKWEHSKQLVSFKPLS Homology
BLAST of Carg25618 vs. NCBI nr
Match: KAG7012653.1 (Cysteine proteinase inhibitor 8, partial [Cucurbita argyrosperma subsp. argyrosperma] >KAG7012654.1 Cysteine proteinase inhibitor 8, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 224.6 bits (571), Expect = 4.5e-55 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
BLAST of Carg25618 vs. NCBI nr
Match: KAG6573541.1 (Cysteine proteinase inhibitor 8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 223.4 bits (568), Expect = 1.0e-54 Identity = 113/114 (99.12%), Postives = 114/114 (100.00%), Query Frame = 0
BLAST of Carg25618 vs. NCBI nr
Match: XP_022925327.1 (cysteine proteinase inhibitor 8-like [Cucurbita moschata] >XP_022925350.1 cysteine proteinase inhibitor 8-like [Cucurbita moschata]) HSP 1 Score: 223.0 bits (567), Expect = 1.3e-54 Identity = 113/114 (99.12%), Postives = 114/114 (100.00%), Query Frame = 0
BLAST of Carg25618 vs. NCBI nr
Match: XP_023542104.1 (cysteine proteinase inhibitor 8-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 222.6 bits (566), Expect = 1.7e-54 Identity = 113/114 (99.12%), Postives = 113/114 (99.12%), Query Frame = 0
BLAST of Carg25618 vs. NCBI nr
Match: KAG6573539.1 (Cysteine proteinase inhibitor 8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 222.2 bits (565), Expect = 2.2e-54 Identity = 112/114 (98.25%), Postives = 113/114 (99.12%), Query Frame = 0
BLAST of Carg25618 vs. ExPASy Swiss-Prot
Match: Q10J94 (Cysteine proteinase inhibitor 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0429000 PE=2 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 2.3e-17 Identity = 51/114 (44.74%), Postives = 66/114 (57.89%), Query Frame = 0
BLAST of Carg25618 vs. ExPASy Swiss-Prot
Match: Q84WT8 (Cysteine proteinase inhibitor 4 OS=Arabidopsis thaliana OX=3702 GN=CYS4 PE=3 SV=2) HSP 1 Score: 86.7 bits (213), Expect = 1.9e-16 Identity = 47/107 (43.93%), Postives = 68/107 (63.55%), Query Frame = 0
BLAST of Carg25618 vs. ExPASy Swiss-Prot
Match: Q41916 (Cysteine proteinase inhibitor 5 OS=Arabidopsis thaliana OX=3702 GN=CYS5 PE=2 SV=2) HSP 1 Score: 85.9 bits (211), Expect = 3.3e-16 Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 0
BLAST of Carg25618 vs. ExPASy Swiss-Prot
Match: P86472 (Cysteine proteinase inhibitor 1 OS=Actinidia chinensis var. chinensis OX=1590841 GN=CYT1 PE=1 SV=2) HSP 1 Score: 84.3 bits (207), Expect = 9.5e-16 Identity = 42/108 (38.89%), Postives = 66/108 (61.11%), Query Frame = 0
BLAST of Carg25618 vs. ExPASy Swiss-Prot
Match: Q6TPK4 (Cysteine proteinase inhibitor 1 OS=Actinidia deliciosa OX=3627 PE=1 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.2e-15 Identity = 42/111 (37.84%), Postives = 65/111 (58.56%), Query Frame = 0
BLAST of Carg25618 vs. ExPASy TrEMBL
Match: A0A6J1EBF5 (cysteine proteinase inhibitor 8-like OS=Cucurbita moschata OX=3662 GN=LOC111432616 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 6.3e-55 Identity = 113/114 (99.12%), Postives = 114/114 (100.00%), Query Frame = 0
BLAST of Carg25618 vs. ExPASy TrEMBL
Match: A0A6J1EBX5 (cysteine proteinase inhibitor 8-like OS=Cucurbita moschata OX=3662 GN=LOC111432638 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 1.8e-54 Identity = 112/114 (98.25%), Postives = 113/114 (99.12%), Query Frame = 0
BLAST of Carg25618 vs. ExPASy TrEMBL
Match: A0A6J1HSW8 (cysteine proteinase inhibitor 5-like OS=Cucurbita maxima OX=3661 GN=LOC111466475 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.3e-47 Identity = 103/114 (90.35%), Postives = 107/114 (93.86%), Query Frame = 0
BLAST of Carg25618 vs. ExPASy TrEMBL
Match: A0A6J1I9P5 (cysteine proteinase inhibitor 5-like OS=Cucurbita maxima OX=3661 GN=LOC111471323 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 2.2e-47 Identity = 102/114 (89.47%), Postives = 106/114 (92.98%), Query Frame = 0
BLAST of Carg25618 vs. ExPASy TrEMBL
Match: A0A6J1IC35 (cysteine proteinase inhibitor 5-like OS=Cucurbita maxima OX=3661 GN=LOC111471628 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.6e-26 Identity = 69/116 (59.48%), Postives = 82/116 (70.69%), Query Frame = 0
BLAST of Carg25618 vs. TAIR 10
Match: AT4G16500.1 (Cystatin/monellin superfamily protein ) HSP 1 Score: 86.7 bits (213), Expect = 1.4e-17 Identity = 47/107 (43.93%), Postives = 68/107 (63.55%), Query Frame = 0
BLAST of Carg25618 vs. TAIR 10
Match: AT5G47550.1 (Cystatin/monellin superfamily protein ) HSP 1 Score: 85.9 bits (211), Expect = 2.3e-17 Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 0
BLAST of Carg25618 vs. TAIR 10
Match: AT5G12140.1 (cystatin-1 ) HSP 1 Score: 68.9 bits (167), Expect = 2.9e-12 Identity = 33/81 (40.74%), Postives = 50/81 (61.73%), Query Frame = 0
BLAST of Carg25618 vs. TAIR 10
Match: AT2G31980.1 (PHYTOCYSTATIN 2 ) HSP 1 Score: 48.1 bits (113), Expect = 5.3e-06 Identity = 28/92 (30.43%), Postives = 49/92 (53.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|