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Carg25590 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTTCTCGGCGTGTTCTTCGCAACGGCTAGCCTTGTTCTTCGTGTTCTTCGTGTTCTTCATTGTTCATCCTGTCTTGGGTGACCCTGCAACGCAGCAACGGATCGACCGAGTATGTCGTCAAATGGAGGATTATGGATTTTGCAATAGAACCTTTAGTGAAAATCTGAGAGGTCCAGTAGATGATGTTGGCTTAACCTTGATAGCAAATGACCAAGTTTTGAGAAATGCGTCCAATACCTATGAGTTCATAGAGCAGCTTCAAGCTAGGACATCCGATCCAGCAACAAGAGCTGCACTTGAGAATTGCAGAATTGGTTGCAGCCAGGTCCGGGAAGCGTTTGAGCAGGCGAGTTATTACTTCAACAAAATCGACTATGCCAGTATGGTCGAGGTTGAAAGGGATGCACCCAGAGGAGAGGCGTTCTGTCGACCGCCGACGACAGCGAGCCGGTTGGTTGAGAGGAAGAGGGAATTGAGGATTCTCATTGCCATGTCTGTCGTTGCTGGTCATATACTAGCCCCTTGA ATGGCGTTCTCGGCGTGTTCTTCGCAACGGCTAGCCTTGTTCTTCGTGTTCTTCGTGTTCTTCATTGTTCATCCTGTCTTGGGTGACCCTGCAACGCAGCAACGGATCGACCGAGTATGTCGTCAAATGGAGGATTATGGATTTTGCAATAGAACCTTTAGTGAAAATCTGAGAGGTCCAGTAGATGATGTTGGCTTAACCTTGATAGCAAATGACCAAGTTTTGAGAAATGCGTCCAATACCTATGAGTTCATAGAGCAGCTTCAAGCTAGGACATCCGATCCAGCAACAAGAGCTGCACTTGAGAATTGCAGAATTGGTTGCAGCCAGGTCCGGGAAGCGTTTGAGCAGGCGAGTTATTACTTCAACAAAATCGACTATGCCAGTATGGTCGAGGTTGAAAGGGATGCACCCAGAGGAGAGGCGTTCTGTCGACCGCCGACGACAGCGAGCCGGTTGGTTGAGAGGAAGAGGGAATTGAGGATTCTCATTGCCATGTCTGTCGTTGCTGGTCATATACTAGCCCCTTGA ATGGCGTTCTCGGCGTGTTCTTCGCAACGGCTAGCCTTGTTCTTCGTGTTCTTCGTGTTCTTCATTGTTCATCCTGTCTTGGGTGACCCTGCAACGCAGCAACGGATCGACCGAGTATGTCGTCAAATGGAGGATTATGGATTTTGCAATAGAACCTTTAGTGAAAATCTGAGAGGTCCAGTAGATGATGTTGGCTTAACCTTGATAGCAAATGACCAAGTTTTGAGAAATGCGTCCAATACCTATGAGTTCATAGAGCAGCTTCAAGCTAGGACATCCGATCCAGCAACAAGAGCTGCACTTGAGAATTGCAGAATTGGTTGCAGCCAGGTCCGGGAAGCGTTTGAGCAGGCGAGTTATTACTTCAACAAAATCGACTATGCCAGTATGGTCGAGGTTGAAAGGGATGCACCCAGAGGAGAGGCGTTCTGTCGACCGCCGACGACAGCGAGCCGGTTGGTTGAGAGGAAGAGGGAATTGAGGATTCTCATTGCCATGTCTGTCGTTGCTGGTCATATACTAGCCCCTTGA MAFSACSSQRLALFFVFFVFFIVHPVLGDPATQQRIDRVCRQMEDYGFCNRTFSENLRGPVDDVGLTLIANDQVLRNASNTYEFIEQLQARTSDPATRAALENCRIGCSQVREAFEQASYYFNKIDYASMVEVERDAPRGEAFCRPPTTASRLVERKRELRILIAMSVVAGHILAP Homology
BLAST of Carg25590 vs. NCBI nr
Match: KAG7021031.1 (hypothetical protein SDJN02_17719, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 353.6 bits (906), Expect = 9.8e-94 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of Carg25590 vs. NCBI nr
Match: KAG6586205.1 (hypothetical protein SDJN03_18938, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 349.4 bits (895), Expect = 1.9e-92 Identity = 174/176 (98.86%), Postives = 175/176 (99.43%), Query Frame = 0
BLAST of Carg25590 vs. NCBI nr
Match: XP_023537272.1 (uncharacterized protein LOC111798394 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 332.4 bits (851), Expect = 2.3e-87 Identity = 167/179 (93.30%), Postives = 171/179 (95.53%), Query Frame = 0
BLAST of Carg25590 vs. NCBI nr
Match: XP_038889172.1 (uncharacterized protein LOC120079054 [Benincasa hispida]) HSP 1 Score: 263.1 bits (671), Expect = 1.7e-66 Identity = 133/175 (76.00%), Postives = 146/175 (83.43%), Query Frame = 0
BLAST of Carg25590 vs. NCBI nr
Match: XP_022156390.1 (uncharacterized protein LOC111023296 [Momordica charantia]) HSP 1 Score: 261.5 bits (667), Expect = 5.1e-66 Identity = 131/176 (74.43%), Postives = 147/176 (83.52%), Query Frame = 0
BLAST of Carg25590 vs. ExPASy TrEMBL
Match: A0A6J1DQ57 (uncharacterized protein LOC111023296 OS=Momordica charantia OX=3673 GN=LOC111023296 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 2.5e-66 Identity = 131/176 (74.43%), Postives = 147/176 (83.52%), Query Frame = 0
BLAST of Carg25590 vs. ExPASy TrEMBL
Match: A0A1S3BWX8 (uncharacterized protein LOC103494023 OS=Cucumis melo OX=3656 GN=LOC103494023 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 2.3e-40 Identity = 96/174 (55.17%), Postives = 111/174 (63.79%), Query Frame = 0
BLAST of Carg25590 vs. ExPASy TrEMBL
Match: A0A6J1DRX6 (uncharacterized protein LOC111023283 OS=Momordica charantia OX=3673 GN=LOC111023283 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 1.9e-34 Identity = 86/180 (47.78%), Postives = 113/180 (62.78%), Query Frame = 0
BLAST of Carg25590 vs. ExPASy TrEMBL
Match: A0A6J1G4X2 (uncharacterized protein LOC111450843 OS=Cucurbita moschata OX=3662 GN=LOC111450843 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 1.9e-34 Identity = 82/179 (45.81%), Postives = 108/179 (60.34%), Query Frame = 0
BLAST of Carg25590 vs. ExPASy TrEMBL
Match: A0A4U5N9E9 (Invertase/pectin methylesterase inhibitor family protein OS=Populus alba OX=43335 GN=D5086_0000271680 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 2.6e-31 Identity = 83/179 (46.37%), Postives = 110/179 (61.45%), Query Frame = 0
BLAST of Carg25590 vs. TAIR 10
Match: AT1G09360.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 78.2 bits (191), Expect = 7.4e-15 Identity = 51/168 (30.36%), Postives = 82/168 (48.81%), Query Frame = 0
BLAST of Carg25590 vs. TAIR 10
Match: AT1G09370.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 68.6 bits (166), Expect = 5.9e-12 Identity = 41/153 (26.80%), Postives = 73/153 (47.71%), Query Frame = 0
BLAST of Carg25590 vs. TAIR 10
Match: AT3G49330.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 53.9 bits (128), Expect = 1.5e-07 Identity = 47/172 (27.33%), Postives = 73/172 (42.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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