Homology
BLAST of Carg25581 vs. NCBI nr
Match:
KAG7021040.1 (RNA polymerase II-associated protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 857.8 bits (2215), Expect = 4.1e-245
Identity = 452/452 (100.00%), Postives = 452/452 (100.00%), Query Frame = 0
Query: 1 MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60
MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY
Sbjct: 1 MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60
Query: 61 MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120
MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA
Sbjct: 61 MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120
Query: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
Query: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR 240
PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR
Sbjct: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR 240
Query: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER 300
SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER
Sbjct: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER 300
Query: 301 NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK 360
NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK
Sbjct: 301 NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK 360
Query: 361 AISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS 420
AISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS
Sbjct: 361 AISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS 420
Query: 421 NEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS 453
NEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS
Sbjct: 421 NEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS 452
BLAST of Carg25581 vs. NCBI nr
Match:
XP_022937809.1 (RNA polymerase II-associated protein 3 isoform X1 [Cucurbita moschata])
HSP 1 Score: 854.4 bits (2206), Expect = 4.6e-244
Identity = 450/452 (99.56%), Postives = 450/452 (99.56%), Query Frame = 0
Query: 1 MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60
MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY
Sbjct: 1 MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60
Query: 61 MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120
MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA
Sbjct: 61 MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120
Query: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
NRAMAYLKIRRFQEAEDDCTEALN DDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 121 NRAMAYLKIRRFQEAEDDCTEALNFDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
Query: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR 240
PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR
Sbjct: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR 240
Query: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER 300
SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER
Sbjct: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER 300
Query: 301 NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK 360
NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK
Sbjct: 301 NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK 360
Query: 361 AISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS 420
AISPAKLPQIFKNALSAPILID VKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS
Sbjct: 361 AISPAKLPQIFKNALSAPILIDTVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS 420
Query: 421 NEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS 453
NEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS
Sbjct: 421 NEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS 452
BLAST of Carg25581 vs. NCBI nr
Match:
XP_022965718.1 (RNA polymerase II-associated protein 3 isoform X1 [Cucurbita maxima])
HSP 1 Score: 850.5 bits (2196), Expect = 6.6e-243
Identity = 447/452 (98.89%), Postives = 450/452 (99.56%), Query Frame = 0
Query: 1 MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60
MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY
Sbjct: 1 MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60
Query: 61 MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120
+KHYDA+NSLSTKSH EQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA
Sbjct: 61 VKHYDAINSLSTKSHNEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120
Query: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
Query: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR 240
PNNQEIKKQHAELRAFVGKAILEKASGASRSSTK+KKMVGKSDSEAKIQDIPPVSSSTLR
Sbjct: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKDKKMVGKSDSEAKIQDIPPVSSSTLR 240
Query: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER 300
SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER
Sbjct: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER 300
Query: 301 NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK 360
NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK
Sbjct: 301 NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK 360
Query: 361 AISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS 420
AISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS
Sbjct: 361 AISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS 420
Query: 421 NEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS 453
NEK DLLKIWDEVFCDEAVPIEYAEMLDSLRS
Sbjct: 421 NEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRS 452
BLAST of Carg25581 vs. NCBI nr
Match:
XP_023538477.1 (RNA polymerase II-associated protein 3 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 846.3 bits (2185), Expect = 1.2e-241
Identity = 445/452 (98.45%), Postives = 449/452 (99.34%), Query Frame = 0
Query: 1 MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60
MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY
Sbjct: 1 MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60
Query: 61 MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120
+KHYDAV SLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA
Sbjct: 61 LKHYDAVKSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120
Query: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
Query: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR 240
PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR
Sbjct: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR 240
Query: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER 300
SGLSAAQ+H+EENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER
Sbjct: 241 SGLSAAQDHIEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER 300
Query: 301 NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK 360
NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQA+LLK
Sbjct: 301 NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQAQLLK 360
Query: 361 AISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS 420
AISPAKLP IFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS
Sbjct: 361 AISPAKLPPIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS 420
Query: 421 NEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS 453
NEKSDLLKIWD VFCDEAVPIEYAEMLDSLRS
Sbjct: 421 NEKSDLLKIWDGVFCDEAVPIEYAEMLDSLRS 452
BLAST of Carg25581 vs. NCBI nr
Match:
KAG6586213.1 (Protein SEMI-ROLLED LEAF 2, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 828.9 bits (2140), Expect = 2.1e-236
Identity = 442/452 (97.79%), Postives = 442/452 (97.79%), Query Frame = 0
Query: 1 MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60
MADSSGKHGRDQPL DWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY
Sbjct: 1 MADSSGKHGRDQPL----------DWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60
Query: 61 MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120
MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA
Sbjct: 61 MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120
Query: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
Query: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR 240
PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR
Sbjct: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR 240
Query: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER 300
SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER
Sbjct: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER 300
Query: 301 NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK 360
NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK
Sbjct: 301 NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK 360
Query: 361 AISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS 420
AISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS
Sbjct: 361 AISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS 420
Query: 421 NEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS 453
NEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS
Sbjct: 421 NEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS 442
BLAST of Carg25581 vs. ExPASy Swiss-Prot
Match:
Q5ZKQ3 (RNA polymerase II-associated protein 3 OS=Gallus gallus OX=9031 GN=RPAP3 PE=2 SV=1)
HSP 1 Score: 120.6 bits (301), Expect = 4.7e-26
Identity = 127/438 (29.00%), Postives = 206/438 (47.03%), Query Frame = 0
Query: 15 DFQGFLNDLQD-WELSLNGRDKKLKPHAISKEKEGGRQPVKATAADYMKHYDAVNSLSTK 74
+FQG D + EL N + K E + Q + + +++ + +AV S T+
Sbjct: 216 NFQGAKEDYEKVLELDANNYEAK-------NELKKIEQALSSESSEQKEFEEAVRSELTE 275
Query: 75 S-----HTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPT-AVAFANRAMAYL 134
+ EQ A +EK+ GN YFK+ K++ AI CY+R IA T A+ ANRAMAYL
Sbjct: 276 NERRCIEEEQLKQKAVTEKDLGNGYFKEGKYEAAIECYTRGIAADGTNALLPANRAMAYL 335
Query: 135 KIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIK 194
KI++++EAE+DCT+AL LD Y KA++RR AR LGK KEA++D E +LEP N++
Sbjct: 336 KIQKYEEAENDCTQALLLDASYSKAFARRGAARVALGKLKEAMQDFEAVLKLEPGNKQAI 395
Query: 195 KQHAELR---AFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPP--------VSS 254
+ ++R A ++ E+ ++ K +V + + ++ P V
Sbjct: 396 NELTKIRNELAEKEQSCHEEYPAVLIKESEIKNIVKLTHNPLNLKSTKPLRRIAVEEVDD 455
Query: 255 STLRSGLSAAQEHVEENGGEKAVKESARLEGTEG-----RSTGAEI----RYKREATNGV 314
L S S++ V K S +E TE + T +I + K E V
Sbjct: 456 DVLNSDFSSSTSLVNN------WKNSVNIETTENLDQDDQLTSMDIPKAKQLKIEEITDV 515
Query: 315 HKDPNSNLGALERNHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRG 374
P GA + V L PS+ + R S A+ P ++Q E +R
Sbjct: 516 -SSPQLPAGAKGVSSV-----LHPSMNKQIERENKASFRSASPVPAIPANSFQLESDFRK 575
Query: 375 FSGDRALQARLLKAISPAKLPQIFKNALSAPILIDIVKCVATFF--TEEMALAISFLENL 424
LK I P+ P++F+ +L + I++ + F+ EE +L + L+ L
Sbjct: 576 LKDCPEKMYLYLKQIEPSIYPKLFQKSLDPDLFNQILRILHDFYIEKEEPSLILEILQRL 634
BLAST of Carg25581 vs. ExPASy Swiss-Prot
Match:
Q68FQ7 (RNA polymerase II-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Rpap3 PE=1 SV=1)
HSP 1 Score: 119.0 bits (297), Expect = 1.4e-25
Identity = 107/368 (29.08%), Postives = 184/368 (50.00%), Query Frame = 0
Query: 83 AASEKEQGNEYFKQKKFKEAIGCYSRSIALSPT-AVAFANRAMAYLKIRRFQEAEDDCTE 142
A +EK+ GN +FK+ K+++AI CY+R IA T A+ ANRAMAYLK+++++EAE DCT+
Sbjct: 282 AIAEKDLGNGFFKEGKYEQAIECYTRGIAADSTNALLPANRAMAYLKVQKYEEAERDCTQ 341
Query: 143 ALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHAELRAFVGKAI 202
A+ LD Y KA++RR TAR LGK EA +D E LEP N++ + + ++ K +
Sbjct: 342 AILLDGSYSKAFARRGTARTFLGKINEAKQDFETVLLLEPGNKQAVTELSRIK----KEL 401
Query: 203 LEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLRSGLSAAQEHVEENG----GEK 262
+EK DS + + PV S S + + +EE G
Sbjct: 402 IEKGRWDDVF----------LDSTQRHNVVKPVDSPHRGSPKALKKVFIEETGNLIESVD 461
Query: 263 AVKESARLEGTEGRSTGAEIRYKREATNG----VHKDPNSNLGALE--------RNHVSR 322
A + SA + ++ + + K++ + G + P + + +E + V
Sbjct: 462 APESSATVPESDRAAVAVDTGRKKDFSQGDSVSSGETPRAKVLKIEAVGDSSAPQAQVDV 521
Query: 323 KQELKPSVQELASRAASRSMVEAAKNIVAPTTA--YQFEVSWRGFSGDRALQARLLKAIS 382
KQ ++ SV E S +++ + A ++ P A +Q E +R + + +K I
Sbjct: 522 KQGVRQSVSEKTSVRVAQTPGQLAAVVLPPVPANSFQLESDFRQLRSSPEMLYQYVKKIE 581
Query: 383 PAKLPQIFKNALSAPILIDIVKCVATFFT--EEMALAISFLENLAKVPRFSILMMCLPSN 430
P+ P++F+ L + I+K + F+ E+ AL LE L+++ RF + +M +
Sbjct: 582 PSLYPKLFQKNLDPDVFNQIIKILHDFYVEREKPALIFEVLERLSQLRRFDMAVMFMSGT 634
BLAST of Carg25581 vs. ExPASy Swiss-Prot
Match:
Q9D706 (RNA polymerase II-associated protein 3 OS=Mus musculus OX=10090 GN=Rpap3 PE=1 SV=1)
HSP 1 Score: 114.4 bits (285), Expect = 3.4e-24
Identity = 123/408 (30.15%), Postives = 186/408 (45.59%), Query Frame = 0
Query: 35 KKLKPHAISKEKEGGRQPVKATAADYMKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYF 94
+K+ SKE G P A AA+ S + +Q A +EK+ GN +F
Sbjct: 243 RKINQALTSKENSG---PGAAAAAE----SKPAAGESKPTGGQQGRQKAIAEKDLGNGFF 302
Query: 95 KQKKFKEAIGCYSRSIALSPT-AVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAY 154
K+ K+++AI CY+R IA T A+ ANRAMAYLKI+R++EAE DCT+A+ LD Y KA+
Sbjct: 303 KEGKYEQAIECYTRGIAADRTNALLPANRAMAYLKIQRYEEAERDCTQAIVLDGSYSKAF 362
Query: 155 SRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHAELRAFVGKAILEKA--SGASRS 214
+RR TAR LGK EA +D E LEP N KQ A + + K ++EK
Sbjct: 363 ARRGTARTFLGKINEAKQDFETVLLLEPGN----KQAATELSRIKKELIEKGHWDDVFLD 422
Query: 215 STKEKKMVGKSDSEAKIQDIPPVSSSTLRSGLSAAQEHVEENGGEKAVKESARLEGTEGR 274
ST+ +V D+ + P E V+ V ES R G
Sbjct: 423 STQRHHVVKAVDNPPR--GSPKALKKVFIEETGNLIETVDAPDSSATVPESDRATAAVGT 482
Query: 275 STGAEIRYKREATNGVH----KDPNSNLGALE--------RNHVSRKQELKPSVQELASR 334
T K+ + GV P + + +E + V KQ+ + E AS
Sbjct: 483 GT------KKNPSEGVSLPAGDRPRAKVLKIEAVSDTSAPQAQVGVKQDARQPGSEKASV 542
Query: 335 AASR--SMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLKAISPAKLPQIFKNALSA 394
A + + AA P ++Q E +R + + +K I P+ P++F+ L
Sbjct: 543 RAEQMPGQLAAAGLPPVPANSFQLESDFRQLRSSPEMLYQYVKNIEPSLYPKLFQKNLDP 602
Query: 395 PILIDIVKCVATFF--TEEMALAISFLENLAKVPRFSILMMCLPSNEK 424
+ I+K + F+ E+ AL LE L+++ RF + +M + E+
Sbjct: 603 DVFNQIIKILHDFYIEREKPALIFEVLERLSQLRRFDMAVMFMSGPER 631
BLAST of Carg25581 vs. ExPASy Swiss-Prot
Match:
Q28IV3 (RNA polymerase II-associated protein 3 OS=Xenopus tropicalis OX=8364 GN=rpap3 PE=2 SV=1)
HSP 1 Score: 113.2 bits (282), Expect = 7.5e-24
Identity = 121/433 (27.94%), Postives = 201/433 (46.42%), Query Frame = 0
Query: 15 DFQGFLNDLQD-WELSLNGRDKKLKPHAISKEKEGGRQPVKATAADYMKHYDAVNSLSTK 74
D QG D + EL +N + K + I+KE + V+ A K +
Sbjct: 215 DLQGAKEDYEKVLELDVNNFEAKNELRKINKELQSSTSDVQEKEAIEEKITVENEEEKKQ 274
Query: 75 SHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPT-AVAFANRAMAYLKIRRF 134
+Q A +K+ GN YFK+ K++ AI CYS+ + T A+ ANRAMAYLKI+++
Sbjct: 275 IEIQQRKQQAIMQKDLGNAYFKEGKYEIAIDCYSQGMEADTTNALLPANRAMAYLKIQKY 334
Query: 135 QEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHAE 194
+EAE DCT A++LD Y KA++RR TAR LGK KEA ED E +L+P N++ +
Sbjct: 335 KEAETDCTLAISLDASYCKAFARRGTARIMLGKQKEAKEDFEMVLKLDPGNKQAVLE--- 394
Query: 195 LRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLRSGLSAAQEHVEE 254
LEK S RS+ K+ K + ++ +P RS + +EE
Sbjct: 395 ---------LEKISRELRSNEKDTKGNKERKLINAVEKLP-----HQRSTKPLRRMVIEE 454
Query: 255 NGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALERNHVSRKQELK-- 314
GG S+ E G++ ++ K + + + +L + V + +E+
Sbjct: 455 VGGPVESCISSLNESNHGKADSMDLITKADKQDLNEEQNFCSLPDVPSAKVPKIEEISDT 514
Query: 315 ------PSVQELASRAASRSMVE-------AAKNI---VAPTTAYQFEVSWRGFSGDRAL 374
S +E + S +E + NI V PT ++Q E +R G+ L
Sbjct: 515 YGSCEPSSGEEHSVSQPSPPKIEKVVTTFSESLNIGIPVVPTNSFQLESDFRRLKGNPDL 574
Query: 375 QARLLKAISPAKLPQIFKNALSAPILIDIVKCVATFF--TEEMALAISFLENLAKVPRFS 426
R LK I P+ ++F+ AL + +I+ + + + L L+ L+++ RF
Sbjct: 575 LYRYLKQIEPSFYGKLFQKALDPDLFSEILTILREQYINKDSCDLIFEILQRLSELKRFD 630
BLAST of Carg25581 vs. ExPASy Swiss-Prot
Match:
Q6NU95 (RNA polymerase II-associated protein 3 OS=Xenopus laevis OX=8355 GN=rpap3 PE=2 SV=1)
HSP 1 Score: 109.4 bits (272), Expect = 1.1e-22
Identity = 115/421 (27.32%), Postives = 191/421 (45.37%), Query Frame = 0
Query: 27 ELSLNGRDKKLKPHAISKEKEGGRQPVKATAADYMKHYDAVNSLSTKSHTEQSFVDAASE 86
EL N + K + I++E V+ A K + +Q A +
Sbjct: 228 ELDANNFEAKNELRKINQELYSSASDVQENMATEAKITVENEEEKKQIEIQQRKQQAIMQ 287
Query: 87 KEQGNEYFKQKKFKEAIGCYSRSIALSPT-AVAFANRAMAYLKIRRFQEAEDDCTEALNL 146
K+ GN YFK+ K++ AI CYS+ + T A+ ANRAMAYLKI++++EAE DCT A++L
Sbjct: 288 KDLGNAYFKEGKYEIAIECYSQGMEADNTNALLPANRAMAYLKIQKYKEAEADCTLAISL 347
Query: 147 DDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHAELRAFVGKAILEKA 206
D Y KA++RR TA LGK KEA ED E +L+P N++ A+LE A
Sbjct: 348 DASYCKAFARRGTASIMLGKQKEAKEDFEMVLKLDPGNKQ--------------AVLELA 407
Query: 207 SGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLRSGLSAAQEHVEENGGEKAVKESARL 266
+ + EK G DS + LRS + +EE GG + ++
Sbjct: 408 KISQELRSIEKDRNGNKDSNQRKLINTVEKLPHLRSTKPLRRMVIEEVGGPAEIFNTSLK 467
Query: 267 EGTEGRSTGAEIRYKREATNGVHKDPN-SNLGALERNHVSRKQEL-------KPSVQE-- 326
E ++ ++ + T ++++ N N + + + +E+ +P+ E
Sbjct: 468 ETNHRKADSVDLTAETN-TQDLNQEQNICNSPDVPSPKIPKIEEISDTPGSCEPTTGEDY 527
Query: 327 LASRAASRSMVEAAKNI---------VAPTTAYQFEVSWRGFSGDRALQARLLKAISPAK 386
L SR + + + PT ++Q E +R G+ L LK I P
Sbjct: 528 LTSRPSPPKIEKVVSTFSESLNIGIPAVPTNSFQLESDFRRLKGNPDLLYVYLKQIEPTL 587
Query: 387 LPQIFKNALSAPILIDIVKCVATFFTEEMA--LAISFLENLAKVPRFSILMMCLPSNEKS 426
++FK AL + DI+ + F + + L L+ L+++ RF + +M L ++K+
Sbjct: 588 YGKLFKKALDPDLFSDILTILREQFINKDSPDLIFEILQRLSELKRFDMAVMFLSESDKN 633
BLAST of Carg25581 vs. ExPASy TrEMBL
Match:
A0A6J1FCA0 (RNA polymerase II-associated protein 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444090 PE=4 SV=1)
HSP 1 Score: 854.4 bits (2206), Expect = 2.2e-244
Identity = 450/452 (99.56%), Postives = 450/452 (99.56%), Query Frame = 0
Query: 1 MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60
MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY
Sbjct: 1 MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60
Query: 61 MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120
MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA
Sbjct: 61 MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120
Query: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
NRAMAYLKIRRFQEAEDDCTEALN DDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 121 NRAMAYLKIRRFQEAEDDCTEALNFDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
Query: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR 240
PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR
Sbjct: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR 240
Query: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER 300
SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER
Sbjct: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER 300
Query: 301 NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK 360
NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK
Sbjct: 301 NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK 360
Query: 361 AISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS 420
AISPAKLPQIFKNALSAPILID VKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS
Sbjct: 361 AISPAKLPQIFKNALSAPILIDTVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS 420
Query: 421 NEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS 453
NEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS
Sbjct: 421 NEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS 452
BLAST of Carg25581 vs. ExPASy TrEMBL
Match:
A0A6J1HPT1 (RNA polymerase II-associated protein 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465531 PE=4 SV=1)
HSP 1 Score: 850.5 bits (2196), Expect = 3.2e-243
Identity = 447/452 (98.89%), Postives = 450/452 (99.56%), Query Frame = 0
Query: 1 MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60
MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY
Sbjct: 1 MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60
Query: 61 MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120
+KHYDA+NSLSTKSH EQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA
Sbjct: 61 VKHYDAINSLSTKSHNEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120
Query: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
Query: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR 240
PNNQEIKKQHAELRAFVGKAILEKASGASRSSTK+KKMVGKSDSEAKIQDIPPVSSSTLR
Sbjct: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKDKKMVGKSDSEAKIQDIPPVSSSTLR 240
Query: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER 300
SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER
Sbjct: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER 300
Query: 301 NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK 360
NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK
Sbjct: 301 NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK 360
Query: 361 AISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS 420
AISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS
Sbjct: 361 AISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS 420
Query: 421 NEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS 453
NEK DLLKIWDEVFCDEAVPIEYAEMLDSLRS
Sbjct: 421 NEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRS 452
BLAST of Carg25581 vs. ExPASy TrEMBL
Match:
A0A6J1FHV1 (RNA polymerase II-associated protein 3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444090 PE=4 SV=1)
HSP 1 Score: 825.5 bits (2131), Expect = 1.1e-235
Identity = 440/452 (97.35%), Postives = 440/452 (97.35%), Query Frame = 0
Query: 1 MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60
MADSSGKHGRDQPL DWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY
Sbjct: 1 MADSSGKHGRDQPL----------DWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60
Query: 61 MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120
MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA
Sbjct: 61 MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120
Query: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
NRAMAYLKIRRFQEAEDDCTEALN DDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 121 NRAMAYLKIRRFQEAEDDCTEALNFDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
Query: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR 240
PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR
Sbjct: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR 240
Query: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER 300
SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER
Sbjct: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER 300
Query: 301 NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK 360
NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK
Sbjct: 301 NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK 360
Query: 361 AISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS 420
AISPAKLPQIFKNALSAPILID VKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS
Sbjct: 361 AISPAKLPQIFKNALSAPILIDTVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS 420
Query: 421 NEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS 453
NEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS
Sbjct: 421 NEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS 442
BLAST of Carg25581 vs. ExPASy TrEMBL
Match:
A0A6J1HRS3 (RNA polymerase II-associated protein 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465531 PE=4 SV=1)
HSP 1 Score: 821.6 bits (2121), Expect = 1.6e-234
Identity = 437/452 (96.68%), Postives = 440/452 (97.35%), Query Frame = 0
Query: 1 MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60
MADSSGKHGRDQPL DWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY
Sbjct: 1 MADSSGKHGRDQPL----------DWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60
Query: 61 MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120
+KHYDA+NSLSTKSH EQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA
Sbjct: 61 VKHYDAINSLSTKSHNEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120
Query: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
Query: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR 240
PNNQEIKKQHAELRAFVGKAILEKASGASRSSTK+KKMVGKSDSEAKIQDIPPVSSSTLR
Sbjct: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKDKKMVGKSDSEAKIQDIPPVSSSTLR 240
Query: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER 300
SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER
Sbjct: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKDPNSNLGALER 300
Query: 301 NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK 360
NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK
Sbjct: 301 NHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLK 360
Query: 361 AISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS 420
AISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS
Sbjct: 361 AISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPS 420
Query: 421 NEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS 453
NEK DLLKIWDEVFCDEAVPIEYAEMLDSLRS
Sbjct: 421 NEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRS 442
BLAST of Carg25581 vs. ExPASy TrEMBL
Match:
A0A6J1DUX9 (RNA polymerase II-associated protein 3 OS=Momordica charantia OX=3673 GN=LOC111023318 PE=4 SV=1)
HSP 1 Score: 738.8 bits (1906), Expect = 1.4e-209
Identity = 392/454 (86.34%), Postives = 418/454 (92.07%), Query Frame = 0
Query: 1 MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60
MADSSGKHGRD LDFQGFLND+QDWELSL G+DKKLKP A KEKEG R+ KA+AADY
Sbjct: 1 MADSSGKHGRDSSLDFQGFLNDMQDWELSLKGKDKKLKPQAFGKEKEGRRRAEKASAADY 60
Query: 61 MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120
+KHYDAVN LS TEQSFVDAASEKE+GNEYFKQKKFKEAI CYSRSIALSPTAVAFA
Sbjct: 61 LKHYDAVNHLSRNFQTEQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 120
Query: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
NRAMAYLKI+RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 121 NRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
Query: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR 240
P+NQEIKKQHAELRAFVGK+ILEKASGASRSS+++K+ VGKSDSEAKIQD+ PVSSSTLR
Sbjct: 181 PHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLR 240
Query: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKD--PNSNLGAL 300
+GL AAQEH+EEN +KAVK S RL+ TE RS AEIRYKREATNG HKD P+ NLG L
Sbjct: 241 TGLQAAQEHIEENVRQKAVKASTRLQDTEDRSMEAEIRYKREATNGFHKDASPSLNLGGL 300
Query: 301 ERNHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARL 360
ERNHV+RKQELKPSVQELASRAASRSMVEAAKNI APTTAYQFEVSWRGFSGD ALQARL
Sbjct: 301 ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARL 360
Query: 361 LKAISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCL 420
LKAISPAKLPQIFKNAL+AP+LIDIVKCVA+FFTEEMALAI+FLENL +VPRF ILMMCL
Sbjct: 361 LKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALAINFLENLTQVPRFGILMMCL 420
Query: 421 PSNEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS 453
PS+EK DLLKIWDEVFCDEAVPIEYAEMLDSLRS
Sbjct: 421 PSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRS 454
BLAST of Carg25581 vs. TAIR 10
Match:
AT1G56440.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 441.4 bits (1134), Expect = 8.6e-124
Identity = 256/476 (53.78%), Postives = 331/476 (69.54%), Query Frame = 0
Query: 1 MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLK--PHAISKEKEGGRQPVKATAA 60
MA S KHGRDQ DFQGF NDLQDWELSL +DKK+K P S +P +
Sbjct: 1 MARSPSKHGRDQTQDFQGFFNDLQDWELSLKDKDKKIKQQPANSSNPSSETFRPSGSGKY 60
Query: 61 DYMKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVA 120
D+ K Y ++ LS+ S +S +D++SEKEQGNE+FKQKKF EAI CYSRSIALSP AV
Sbjct: 61 DFAKKYRSIRDLSS-SLIGESLLDSSSEKEQGNEFFKQKKFNEAIDCYSRSIALSPNAVT 120
Query: 121 FANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQR 180
+ANRAMAYLKI+R++EAE DCTEALNLDDRYIKAYSRRATARKELG KEA EDAEFA R
Sbjct: 121 YANRAMAYLKIKRYREAEVDCTEALNLDDRYIKAYSRRATARKELGMIKEAKEDAEFALR 180
Query: 181 LEPNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQD-------- 240
LEP +QE+KKQ+A++++ + K I+EKA+GA +S+ +E ++ S + KIQ
Sbjct: 181 LEPESQELKKQYADIKSLLEKEIIEKATGAMQSTAQE--LLKTSGLDKKIQKPKTEMTSK 240
Query: 241 ------------IPPVSSSTLRSGLSAAQE-HVEENGGEKAVKESARLEGTEGRS-TGAE 300
+ PV S SG + EE E ++K A E + + T
Sbjct: 241 PVTLVAKTNRDIVQPVLGSNESSGKKLIENIQPEEKSKEGSMKIPAITEILDSKKVTPGS 300
Query: 301 IRYKREATNGVHKDPNSNLGALERNHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPT 360
Y++EA D N + N VS++ ELKPSVQELA+ AAS +M EA+KNI P
Sbjct: 301 QSYEKEAK---PSDRNGTQPSGPENQVSKQLELKPSVQELAAHAASLAMTEASKNIKTPK 360
Query: 361 TAYQFEVSWRGFSGDRALQARLLKAISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMA 420
+AY+FE SWR FSGD AL+++LLK +P+ LPQIFKNAL++P+L+DI+KCVA+FFTE+M
Sbjct: 361 SAYEFENSWRSFSGDSALRSQLLKVTTPSSLPQIFKNALTSPVLVDIIKCVASFFTEDMD 420
Query: 421 LAISFLENLAKVPRFSILMMCLPSNEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS 453
LA+ ++ENL KVPRF++L+MCL S EK++LLKIW++VFC++A P+EYAE+LD LRS
Sbjct: 421 LAVKYIENLTKVPRFNMLVMCLTSTEKNELLKIWEDVFCNKATPMEYAEVLDKLRS 470
BLAST of Carg25581 vs. TAIR 10
Match:
AT1G56440.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 435.3 bits (1118), Expect = 6.2e-122
Identity = 254/492 (51.63%), Postives = 335/492 (68.09%), Query Frame = 0
Query: 1 MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLK--PHAISKEKEGGRQPVKATAA 60
MA S KHGRDQ DFQGF NDLQDWELSL +DKK+K P S +P +
Sbjct: 1 MARSPSKHGRDQTQDFQGFFNDLQDWELSLKDKDKKIKQQPANSSNPSSETFRPSGSGKY 60
Query: 61 DYMKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVA 120
D+ K Y ++ LS+ S +S +D++SEKEQGNE+FKQKKF EAI CYSRSIALSP AV
Sbjct: 61 DFAKKYRSIRDLSS-SLIGESLLDSSSEKEQGNEFFKQKKFNEAIDCYSRSIALSPNAVT 120
Query: 121 FANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQR 180
+ANRAMAYLKI+R++EAE DCTEALNLDDRYIKAYSRRATARKELG KEA EDAEFA R
Sbjct: 121 YANRAMAYLKIKRYREAEVDCTEALNLDDRYIKAYSRRATARKELGMIKEAKEDAEFALR 180
Query: 181 LEPNNQEIKKQHAELRAFVGKAILEKASGASRSSTKE----------------------- 240
LEP +QE+KKQ+A++++ + K I+EKA+GA +S+ +E
Sbjct: 181 LEPESQELKKQYADIKSLLEKEIIEKATGAMQSTAQELLKTSGLDKKIQKPKTEMTSKPV 240
Query: 241 -----------KKMVGKSDSEAK--IQDIPPVSSSTLRSGLSAAQE-HVEENGGEKAVKE 300
+ ++G ++S K I++I P R +S +++E E ++K
Sbjct: 241 TLVAKTNRDIVQPVLGSNESSGKKLIENIQPEHRWNFRELISLYLSCYLQEKSKEGSMKI 300
Query: 301 SARLEGTEGRS-TGAEIRYKREATNGVHKDPNSNLGALERNHVSRKQELKPSVQELASRA 360
A E + + T Y++EA D N + N VS++ ELKPSVQELA+ A
Sbjct: 301 PAITEILDSKKVTPGSQSYEKEAK---PSDRNGTQPSGPENQVSKQLELKPSVQELAAHA 360
Query: 361 ASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLKAISPAKLPQIFKNALSAPIL 420
AS +M EA+KNI P +AY+FE SWR FSGD AL+++LLK +P+ LPQIFKNAL++P+L
Sbjct: 361 ASLAMTEASKNIKTPKSAYEFENSWRSFSGDSALRSQLLKVTTPSSLPQIFKNALTSPVL 420
Query: 421 IDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCLPSNEKSDLLKIWDEVFCDEAVP 453
+DI+KCVA+FFTE+M LA+ ++ENL KVPRF++L+MCL S EK++LLKIW++VFC++A P
Sbjct: 421 VDIIKCVASFFTEDMDLAVKYIENLTKVPRFNMLVMCLTSTEKNELLKIWEDVFCNKATP 480
BLAST of Carg25581 vs. TAIR 10
Match:
AT3G17970.1 (translocon at the outer membrane of chloroplasts 64-III )
HSP 1 Score: 98.2 bits (243), Expect = 1.8e-20
Identity = 58/127 (45.67%), Postives = 83/127 (65.35%), Query Frame = 0
Query: 71 STKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSP-TAVAFANRAMAYLKI 130
S K+ T++ + A KE+GN+ FK+K +++AIG YS +I LS A ++NRA AYL++
Sbjct: 464 SKKAITKEESAEIA--KEKGNQAFKEKLWQKAIGLYSEAIKLSDNNATYYSNRAAAYLEL 523
Query: 131 RRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQ 190
F +AE+DCT+A+ LD + +KAY RR TAR+ LG K A+ED +A LEPNN+
Sbjct: 524 GGFLQAEEDCTKAITLDKKNVKAYLRRGTAREMLGDCKGAIEDFRYALVLEPNNKRASLS 583
Query: 191 HAELRAF 197
LR F
Sbjct: 584 AERLRKF 588
BLAST of Carg25581 vs. TAIR 10
Match:
AT5G09420.1 (translocon at the outer membrane of chloroplasts 64-V )
HSP 1 Score: 79.7 bits (195), Expect = 6.6e-15
Identity = 49/131 (37.40%), Postives = 77/131 (58.78%), Query Frame = 0
Query: 68 NSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALS-PTAVAFANRAMAY 127
++L+ S T + + KE+GN +K K++ +A+ Y+ +I L+ A + NRA A+
Sbjct: 473 SNLAPVSDTNGNMEASEVMKEKGNAAYKGKQWNKAVNFYTEAIKLNGANATYYCNRAAAF 532
Query: 128 LKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEI 187
L++ FQ+AE DCT+A+ +D + +KAY RR TAR+ L + KEA D A LEP N+
Sbjct: 533 LELCCFQQAEQDCTKAMLIDKKNVKAYLRRGTARESLVRYKEAAADFRHALVLEPQNKTA 592
Query: 188 KKQHAELRAFV 198
K LR +
Sbjct: 593 KVAEKRLRKHI 603
BLAST of Carg25581 vs. TAIR 10
Match:
AT2G42810.2 (protein phosphatase 5.2 )
HSP 1 Score: 78.6 bits (192), Expect = 1.5e-14
Identity = 62/175 (35.43%), Postives = 93/175 (53.14%), Query Frame = 0
Query: 73 KSHTEQSFVDAASE-KEQGNEYFKQKKFKEAIGCYSRSIAL-SPTAVAFANRAMAYLKIR 132
++ E S V A E K Q NE FK K+ AI Y+++I L S AV +ANRA A+ K+
Sbjct: 2 ETKNENSDVSRAEEFKSQANEAFKGHKYSSAIDLYTKAIELNSNNAVYWANRAFAHTKLE 61
Query: 133 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQH 192
+ A D ++A+ +D RY K Y RR A +GK K+AL+D + +RL PN+ + ++
Sbjct: 62 EYGSAIQDASKAIEVDSRYSKGYYRRGAAYLAMGKFKDALKDFQQVKRLSPNDPDATRKL 121
Query: 193 AELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLRSGLSA 246
E V K E+A S E++ V +S I + P SS ++ L+A
Sbjct: 122 KECEKAVMKLKFEEAISVPVS---ERRSVAESIDFHTIGNKPRSSSMPTKTALAA 173
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7021040.1 | 4.1e-245 | 100.00 | RNA polymerase II-associated protein 3, partial [Cucurbita argyrosperma subsp. a... | [more] |
XP_022937809.1 | 4.6e-244 | 99.56 | RNA polymerase II-associated protein 3 isoform X1 [Cucurbita moschata] | [more] |
XP_022965718.1 | 6.6e-243 | 98.89 | RNA polymerase II-associated protein 3 isoform X1 [Cucurbita maxima] | [more] |
XP_023538477.1 | 1.2e-241 | 98.45 | RNA polymerase II-associated protein 3 isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
KAG6586213.1 | 2.1e-236 | 97.79 | Protein SEMI-ROLLED LEAF 2, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
Match Name | E-value | Identity | Description | |
Q5ZKQ3 | 4.7e-26 | 29.00 | RNA polymerase II-associated protein 3 OS=Gallus gallus OX=9031 GN=RPAP3 PE=2 SV... | [more] |
Q68FQ7 | 1.4e-25 | 29.08 | RNA polymerase II-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Rpap3 PE... | [more] |
Q9D706 | 3.4e-24 | 30.15 | RNA polymerase II-associated protein 3 OS=Mus musculus OX=10090 GN=Rpap3 PE=1 SV... | [more] |
Q28IV3 | 7.5e-24 | 27.94 | RNA polymerase II-associated protein 3 OS=Xenopus tropicalis OX=8364 GN=rpap3 PE... | [more] |
Q6NU95 | 1.1e-22 | 27.32 | RNA polymerase II-associated protein 3 OS=Xenopus laevis OX=8355 GN=rpap3 PE=2 S... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FCA0 | 2.2e-244 | 99.56 | RNA polymerase II-associated protein 3 isoform X1 OS=Cucurbita moschata OX=3662 ... | [more] |
A0A6J1HPT1 | 3.2e-243 | 98.89 | RNA polymerase II-associated protein 3 isoform X1 OS=Cucurbita maxima OX=3661 GN... | [more] |
A0A6J1FHV1 | 1.1e-235 | 97.35 | RNA polymerase II-associated protein 3 isoform X2 OS=Cucurbita moschata OX=3662 ... | [more] |
A0A6J1HRS3 | 1.6e-234 | 96.68 | RNA polymerase II-associated protein 3 isoform X2 OS=Cucurbita maxima OX=3661 GN... | [more] |
A0A6J1DUX9 | 1.4e-209 | 86.34 | RNA polymerase II-associated protein 3 OS=Momordica charantia OX=3673 GN=LOC1110... | [more] |
Match Name | E-value | Identity | Description | |
AT1G56440.1 | 8.6e-124 | 53.78 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G56440.2 | 6.2e-122 | 51.63 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G17970.1 | 1.8e-20 | 45.67 | translocon at the outer membrane of chloroplasts 64-III | [more] |
AT5G09420.1 | 6.6e-15 | 37.40 | translocon at the outer membrane of chloroplasts 64-V | [more] |
AT2G42810.2 | 1.5e-14 | 35.43 | protein phosphatase 5.2 | [more] |