Carg25551 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25551
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Transcription initiation factor TFIID subunit 8
Location	Carg_Chr07: 4771907 .. 4774674 (+)
RNA-Seq Expression	Carg25551
Synteny	Carg25551

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCATGGAGGTGGGAAAATTACGAGAGAGATTGAAAATCAGGTGGATCGTTTTAGAAGAGCTGGAGCTGATGATTTTGGGCGAGCGGCGTCGAAGATTGCAGCAGCACAGATATGCCAGAGTCTGGGATTTCAGGGATCGAAGGAGTCTGCTTTGGACACGCTGGCGGAAATTGTAATAGTGTATCTTAGTAACGTGGGAAAGATGGCGAATTTCTATTCTAACTTAGCTGGAAGAACTGAGTGTAATGTGTTTGACATTGTTAGAGGACTTAAAGATTTAGAAGCACTTGGGTCTAGTCAAGATGCTGAGGTTAGCCGTTGTCTTGCAGGTTCACGTTCAATTCAAGAAATTTTGGAGTATATGTATTCGGTGCAAGAGATTCCATTTGCTCAGCCAGTGCCGCAGTTTCCTATTATTAAGAACTGCAACGTGCTTCCGAGTTTCATTCAAATGAGGGAAACACCTCCTAGTAAACATATACCCAATTGGCTACCTGCTTTTCCTGATCCCCACACTTACATTTATACGCCAGTGTGGAATAAGAGAACAACGGACCCTCGCACCGATAAGATTGAGCAAGCAAAGCAGAGGAGAAAGGCAGAGAAGTCGTTTTTAAGTCTGCAGCAGCGGTTGGTTGTTGATACTGGCAATATAGAGGAAGAATTACCTATTTTGAATAGTAACACATCCCATGATTCAGAATTACAACCGAGGAAGGATGCTGTTTCCGTGGCCAAATCGCCTCTTAAACATTCAGATCATGTGTTTGATGACAGTGGTTCTGTGTTAGAGGCATTTGCTCCGGTCATAGAAGCTGTTAAAGGCAGTGGCTTTTATGACGACGACGAGGGTGAGAAGAAGGATCTTCCCACTACTAGGCATCCTGTTCAATTTAAGTTTAAAACAGGGAAGAAGCTTCTTGGTGATTCTTTGGATTTGAACATTCAAAAGAAAGGAATTAGTAGAACAACAGTCTTGGTTGGACGGTATGATGAAAGGGATGATAGGAAACGAAGAGCTGAATACATTCTTAGGAAGTCTATGGAGAACCCGCAAGAACTCAATCAGTTGTGAATAAATATATTGACTGGCGTTAGTAATTTAATCTAGGTATTTGGTATTAGCTGGTGCAATTGTTGCTTTAGTTAACAGCATATCTTCCTTGTAGTACGGCCATTCTTGTAATTTACATTGAGTTCCTTGTATTTCTACTCAGGATTTTTTCAGAGATGCAAATGCTTGTGAAAATTTTATCGAGAAGGTCTCGGTCTCAGTCTCGCGTCTCTTTTCATCTCTCACATTGTGTTTTCAACTGTTTGTTCTGTTATTGAGTTGTGATATTGAATCTTTTGGCTCCTTGGTTTGGGAACTTTGTAGTCAAAGTCCAATTTCCCTTTTTGCAGTATAATGCATACAAGAAACGATGATGTTGAATTCAAGCTTAATGAAACCATGAAACTACCGGATTTCTTTTTGCAGGGAAAGTACTGAAAGGTGGCCATTCTTTGCAGCTTCTGGATTGGTTCTCTCTTCTTGTCTTCTGATGAACCTGCTTGAACTGCAGGACCAAAGATTTCCTTATTTTTTTCTTCATGGCACAGGTATGATTCGAAGGTTACTATTTCTCTATTTTACTGCTTTCAGATTTGATTTATGCTTTTTATGACTTAGATTTACCTAATCTGATCTTCCCTAGGAAACCTACTGAACGTTTCTGAATGGTATGATTTGTCCTTAAGAGTAAAACATTAAGCTGCAGCTAAAAAGATATCAGAACCTAATTTGGATATTGTAACCATGATTTGTCTCGAGAGAACAGTCGAGATGTGTGCAAGTTAGTAAGAACGCTCACAGTATAAAATAAAATAACGCGTCCTTAGACCTGCATCACGAATGTTCTTTGTAAACGCACGAGGAATTTAGATAGGTGGACACTTTACTTTTATCATATCTGTTAAGCAAAAGGAGGGGCAAGAATGAGCCAGAGTGGGTTATAGCTGTTGAAGTACTGTAAGATCTCGCATATTCCTGTGTTTTATCATTGTTCTTTCAACTGTAATGCTCAAATAATGTGTTTGTTTCGTTTTCTTCCTCAATGTTGTCTGGAAGGTGAATTATTGATCGACCCGTTTCAAATATCGATTTTGTGGAGTTGGATAAGGATAGGATTTGAGATACAAGTCTCAAAGTTGTGTCTATGAAATTTTTTCTTTTTATGTTGCTTTCTGCTGTGTCTTCTTAGAACAAACATCCTTGCTTTATACCCTGACTACTTTCTTGGAGGCTTTTTGATAAATTAAGCATTGGAATGTCATGCTACAAAATGGTTTCCGAGCTGACCCTTTGCGACATGCTTGTCGATCCTACCGAAAAACAGAAATTTAAGTTATGCCTTGTTGTCCAATCCCCATACGTCGACCTTGTCAAGTTTCAATGGGAAATATTTTGAATTCGAGTCCCTTTTGAATCAAGCCTAATTGACGGTTAGTTTTAGTTTTTCTCAAATTGTTTGCCAGTCTTATTTAGATTTTTTCTTATAAACTCGTTCATATGTATGTGGCTTGTGTGCACGTTCATATGACAAATAGAAATTGTACGGTTAACTATTTGGTTTTTTGTTTTCGAAATTTGTGCATATTTTTTCATTAGAATGGTGTACAATGGGTATCATCATTCATAGCCAAACATTTGAATCCTTGAACTATATGAACTAAAATTTTAATTTAATGAAATATTTAGGGCGAAGTAATGTCTCAACATGA

mRNA sequence

ATGAGCCATGGAGGTGGGAAAATTACGAGAGAGATTGAAAATCAGGTGGATCGTTTTAGAAGAGCTGGAGCTGATGATTTTGGGCGAGCGGCGTCGAAGATTGCAGCAGCACAGATATGCCAGAGTCTGGGATTTCAGGGATCGAAGGAGTCTGCTTTGGACACGCTGGCGGAAATTGTAATAGTGTATCTTAGTAACGTGGGAAAGATGGCGAATTTCTATTCTAACTTAGCTGGAAGAACTGAGTGTAATGTGTTTGACATTGTTAGAGGACTTAAAGATTTAGAAGCACTTGGGTCTAGTCAAGATGCTGAGGTTAGCCGTTGTCTTGCAGGTTCACGTTCAATTCAAGAAATTTTGGAGTATATGTATTCGGTGCAAGAGATTCCATTTGCTCAGCCAGTGCCGCAGTTTCCTATTATTAAGAACTGCAACGTGCTTCCGAGTTTCATTCAAATGAGGGAAACACCTCCTAGTAAACATATACCCAATTGGCTACCTGCTTTTCCTGATCCCCACACTTACATTTATACGCCAGTGTGGAATAAGAGAACAACGGACCCTCGCACCGATAAGATTGAGCAAGCAAAGCAGAGGAGAAAGGCAGAGAAGTCGTTTTTAAGTCTGCAGCAGCGGTTGGTTGTTGATACTGGCAATATAGAGGAAGAATTACCTATTTTGAATAGTAACACATCCCATGATTCAGAATTACAACCGAGGAAGGATGCTGTTTCCGTGGCCAAATCGCCTCTTAAACATTCAGATCATGTGTTTGATGACAGTGGTTCTGTGTTAGAGGCATTTGCTCCGGTCATAGAAGCTGTTAAAGGCAGTGGCTTTTATGACGACGACGAGGGTGAGAAGAAGGATCTTCCCACTACTAGGCATCCTGTTCAATTTAAGTTTAAAACAGGGAAGAAGCTTCTTGGTGATTCTTTGGATTTGAACATTCAAAAGAAAGGAATTAGTAGAACAACAGTCTTGGTTGGACGGTATGATGAAAGGGATGATAGGAAACGAAGAGCTGAATACATTCTTAGGAAGTCTATGGAGAACCCGCAAGAACTCAATCAGTTGGAAAGTACTGAAAGGTGGCCATTCTTTGCAGCTTCTGGATTGGTTCTCTCTTCTTGTCTTCTGATGAACCTGCTTGAACTGCAGGACCAAAGATTTCCTTATTTTTTTCTTCATGGCACAGGGCGAAGTAATGTCTCAACATGA

Coding sequence (CDS)

ATGAGCCATGGAGGTGGGAAAATTACGAGAGAGATTGAAAATCAGGTGGATCGTTTTAGAAGAGCTGGAGCTGATGATTTTGGGCGAGCGGCGTCGAAGATTGCAGCAGCACAGATATGCCAGAGTCTGGGATTTCAGGGATCGAAGGAGTCTGCTTTGGACACGCTGGCGGAAATTGTAATAGTGTATCTTAGTAACGTGGGAAAGATGGCGAATTTCTATTCTAACTTAGCTGGAAGAACTGAGTGTAATGTGTTTGACATTGTTAGAGGACTTAAAGATTTAGAAGCACTTGGGTCTAGTCAAGATGCTGAGGTTAGCCGTTGTCTTGCAGGTTCACGTTCAATTCAAGAAATTTTGGAGTATATGTATTCGGTGCAAGAGATTCCATTTGCTCAGCCAGTGCCGCAGTTTCCTATTATTAAGAACTGCAACGTGCTTCCGAGTTTCATTCAAATGAGGGAAACACCTCCTAGTAAACATATACCCAATTGGCTACCTGCTTTTCCTGATCCCCACACTTACATTTATACGCCAGTGTGGAATAAGAGAACAACGGACCCTCGCACCGATAAGATTGAGCAAGCAAAGCAGAGGAGAAAGGCAGAGAAGTCGTTTTTAAGTCTGCAGCAGCGGTTGGTTGTTGATACTGGCAATATAGAGGAAGAATTACCTATTTTGAATAGTAACACATCCCATGATTCAGAATTACAACCGAGGAAGGATGCTGTTTCCGTGGCCAAATCGCCTCTTAAACATTCAGATCATGTGTTTGATGACAGTGGTTCTGTGTTAGAGGCATTTGCTCCGGTCATAGAAGCTGTTAAAGGCAGTGGCTTTTATGACGACGACGAGGGTGAGAAGAAGGATCTTCCCACTACTAGGCATCCTGTTCAATTTAAGTTTAAAACAGGGAAGAAGCTTCTTGGTGATTCTTTGGATTTGAACATTCAAAAGAAAGGAATTAGTAGAACAACAGTCTTGGTTGGACGGTATGATGAAAGGGATGATAGGAAACGAAGAGCTGAATACATTCTTAGGAAGTCTATGGAGAACCCGCAAGAACTCAATCAGTTGGAAAGTACTGAAAGGTGGCCATTCTTTGCAGCTTCTGGATTGGTTCTCTCTTCTTGTCTTCTGATGAACCTGCTTGAACTGCAGGACCAAAGATTTCCTTATTTTTTTCTTCATGGCACAGGGCGAAGTAATGTCTCAACATGA

Protein sequence

MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIVIVYLSNVGKMANFYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEILEYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPVWNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPRKDAVSVAKSPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQFKFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQLESTERWPFFAASGLVLSSCLLMNLLELQDQRFPYFFLHGTGRSNVST

Homology

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BLAST of Carg25551 vs. NCBI nr
Match: KAG7027250.1 (Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 808.9 bits (2088), Expect = 2.0e-230
Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 0


Query: 1   MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV 60
           MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV
Sbjct: 1   MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV 60

Query: 61  IVYLSNVGKMANFYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEIL 120
           IVYLSNVGKMANFYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEIL
Sbjct: 61  IVYLSNVGKMANFYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEIL 120

Query: 121 EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180
           EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV
Sbjct: 121 EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180

Query: 181 WNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPR 240
           WNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPR
Sbjct: 181 WNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPR 240

Query: 241 KDAVSVAKSPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQF 300
           KDAVSVAKSPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQF
Sbjct: 241 KDAVSVAKSPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQF 300

Query: 301 KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQLE 360
           KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQLE
Sbjct: 301 KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQLE 360

Query: 361 STERWPFFAASGLVLSSCLLMNLLELQDQRFPYFFLHGTGRSNVST 407
           STERWPFFAASGLVLSSCLLMNLLELQDQRFPYFFLHGTGRSNVST
Sbjct: 361 STERWPFFAASGLVLSSCLLMNLLELQDQRFPYFFLHGTGRSNVST 406

[Close]

BLAST of Carg25551 vs. NCBI nr
Match: XP_022963117.1 (transcription initiation factor TFIID subunit 8-like isoform X1 [Cucurbita moschata] >XP_022963118.1 transcription initiation factor TFIID subunit 8-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 711.4 bits (1835), Expect = 4.3e-201
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0


Query: 1   MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV 60
           MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV
Sbjct: 1   MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV 60

Query: 61  IVYLSNVGKMANFYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEIL 120
           IVYLSNVGKMANFYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEIL
Sbjct: 61  IVYLSNVGKMANFYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEIL 120

Query: 121 EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180
           EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV
Sbjct: 121 EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180

Query: 181 WNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPR 240
           WNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPR
Sbjct: 181 WNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPR 240

Query: 241 KDAVSVAKSPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQF 300
           KDAVSVAKSPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQF
Sbjct: 241 KDAVSVAKSPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQF 300

Query: 301 KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL 360
           KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL 359

[Close]

BLAST of Carg25551 vs. NCBI nr
Match: XP_023517598.1 (transcription initiation factor TFIID subunit 8-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023517599.1 transcription initiation factor TFIID subunit 8-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023517600.1 transcription initiation factor TFIID subunit 8-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 695.7 bits (1794), Expect = 2.4e-196
Identity = 351/359 (97.77%), Postives = 355/359 (98.89%), Query Frame = 0


Query: 1   MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV 60
           MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV
Sbjct: 1   MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV 60

Query: 61  IVYLSNVGKMANFYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEIL 120
           IVYLSNVGKMANFYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEIL
Sbjct: 61  IVYLSNVGKMANFYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEIL 120

Query: 121 EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180
           EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV
Sbjct: 121 EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180

Query: 181 WNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPR 240
           WNKRTTDPRTDKIEQAKQRRKAEKS LSLQQRLVVDTGNIEEELPILNSNTSHDSELQPR
Sbjct: 181 WNKRTTDPRTDKIEQAKQRRKAEKSLLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPR 240

Query: 241 KDAVSVAKSPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQF 300
           KDAVSVAK PLKHSDHVFDDSGSVLEAFAPV+EAVKGSG YD++EGEKKDLPT R+PVQF
Sbjct: 241 KDAVSVAKLPLKHSDHVFDDSGSVLEAFAPVLEAVKGSGVYDEEEGEKKDLPTIRYPVQF 300

Query: 301 KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL 360
           KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL 359

[Close]

BLAST of Carg25551 vs. NCBI nr
Match: XP_022972681.1 (transcription initiation factor TFIID subunit 8-like isoform X1 [Cucurbita maxima] >XP_022972682.1 transcription initiation factor TFIID subunit 8-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 694.9 bits (1792), Expect = 4.2e-196
Identity = 351/359 (97.77%), Postives = 355/359 (98.89%), Query Frame = 0


Query: 1   MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV 60
           MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV
Sbjct: 1   MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV 60

Query: 61  IVYLSNVGKMANFYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEIL 120
           IVYLSNVGKMA+FYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEIL
Sbjct: 61  IVYLSNVGKMASFYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEIL 120

Query: 121 EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180
           EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPD HTYIYTPV
Sbjct: 121 EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDSHTYIYTPV 180

Query: 181 WNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPR 240
           WNKRTTDPRTDKIEQAKQRRKAEKS LSLQQRLVVDTGNI+EELPILNSNTSHDSEL+PR
Sbjct: 181 WNKRTTDPRTDKIEQAKQRRKAEKSLLSLQQRLVVDTGNIKEELPILNSNTSHDSELKPR 240

Query: 241 KDAVSVAKSPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQF 300
           KDAVSVAK PLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDD+EGEKKDLPT RHPVQF
Sbjct: 241 KDAVSVAKLPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDEEGEKKDLPTIRHPVQF 300

Query: 301 KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL 360
           KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL 359

[Close]

BLAST of Carg25551 vs. NCBI nr
Match: XP_022963120.1 (transcription initiation factor TFIID subunit 8-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 640.2 bits (1650), Expect = 1.2e-179
Identity = 330/359 (91.92%), Postives = 330/359 (91.92%), Query Frame = 0


Query: 1   MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV 60
           MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV
Sbjct: 1   MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV 60

Query: 61  IVYLSNVGKMANFYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEIL 120
           IVYLSNVGKMANFYSNLAGRTEC                             SRSIQEIL
Sbjct: 61  IVYLSNVGKMANFYSNLAGRTEC-----------------------------SRSIQEIL 120

Query: 121 EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180
           EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV
Sbjct: 121 EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180

Query: 181 WNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPR 240
           WNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPR
Sbjct: 181 WNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPR 240

Query: 241 KDAVSVAKSPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQF 300
           KDAVSVAKSPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQF
Sbjct: 241 KDAVSVAKSPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQF 300

Query: 301 KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL 360
           KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL 330

[Close]

BLAST of Carg25551 vs. ExPASy Swiss-Prot
Match: Q9SYZ9 (Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 GN=TAF8 PE=1 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 4.5e-68
Identity = 147/339 (43.36%), Postives = 214/339 (63.13%), Query Frame = 0


Query: 26  DFGRAASKIAAAQICQSLGFQGSKESALDTLAEIVIVYLSNVGKMANFYSNLAGRTECNV 85
           +F  AA+K A AQ+C+S+G++  K+ AL++L+   + Y+  +GK A  ++NL GR++CNV
Sbjct: 25  EFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQYILQLGKTATSFANLTGRSQCNV 84

Query: 86  FDIVRGLKDLEALGSSQDAEVSRCLAG-SRSIQEILEYMYSVQEIPFAQPVPQFPII--- 145
           FDI+  L DL      Q      C  G S  ++EI++++ S +E+PF+QP+P FP+    
Sbjct: 85  FDIILALDDLTDNNGEQGISSESCSLGRSIKLREIIDFVNSSEEVPFSQPLPSFPVAISD 144

Query: 146 KNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPVWNKRTTDPRTDKIEQAKQRRK 205
           ++  ++PSF+++ ETPP KHIP WLPAFPDPHTY  TP+W +R +DPR DKIEQA+QRRK
Sbjct: 145 RSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKETPMWIERVSDPRGDKIEQARQRRK 204

Query: 206 AEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPRKDAVSVAKSPLKHSDHVFDDS 265
           AE++ LSLQ++LV     I    P+         E++  +  +    S  K  + +  D 
Sbjct: 205 AERALLSLQRKLVC---KISSRNPVWGDMDGVKEEMRDDESELRSVSSGEK-VESLNRDG 264

Query: 266 GSVLEAFAPVIEAVKGSGFYDDDEGE-KKDLPTTRHPVQFKFKTGKKLLGDSLDLNIQKK 325
            SV+EAFAP +EA +  GF  +   E KK+ P        K +T KK LG  LDL++Q K
Sbjct: 265 LSVIEAFAPAMEAAR-DGFSSEAHTEWKKNKPVALS----KLRTEKKFLGQPLDLSLQMK 324

Query: 326 GISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL 360
           G  R    V R ++RDD++RRAE+ILR+ MENP +LNQL
Sbjct: 325 GEDRPISFV-REEDRDDKRRRAEFILRQCMENPVDLNQL 353

[Close]

BLAST of Carg25551 vs. ExPASy Swiss-Prot
Match: A7MAZ4 (Transcription initiation factor TFIID subunit 8 OS=Bos taurus OX=9913 GN=TAF8 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.5e-10
Identity = 51/193 (26.42%), Postives = 87/193 (45.08%), Query Frame = 0


Query: 29  RAASKIAAAQICQSLGFQGSKESALDTLAEIVIVYLSNVGKMANFYSNLAGRTECNVFDI 88
           R   ++  + +    GF+ +++++++TL E++  Y+S +G+ A  Y     RT+  + DI
Sbjct: 34  RRTLQVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDI 93

Query: 89  VRGLKDLEALGSSQDAEVSRCLAGSRSIQEILEYMYSVQEIPFAQPVPQFPIIKNCNVLP 148
           V  L ++     +  A   R                S + +  A PV   P+        
Sbjct: 94  VVTLVEMGFNVDTLPAYAKR----------------SQRMVITAPPVTNQPVTPKALTAG 153

Query: 149 SFIQMRETPPSKHIPNWLPAFPDPHTYIYTPVWNKRTTDPRTDKIEQAKQRRKAEKSFLS 208
              Q R  PP  HIP+  P FPDPHTYI TP + +  +D +  + + A QRR  E++   
Sbjct: 154 ---QNRPHPP--HIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERAL-- 201

Query: 209 LQQRLVVDTGNIE 222
              R +  TG  +
Sbjct: 214 --TRFMAKTGETQ 201

[Close]

BLAST of Carg25551 vs. ExPASy Swiss-Prot
Match: Q7Z7C8 (Transcription initiation factor TFIID subunit 8 OS=Homo sapiens OX=9606 GN=TAF8 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.5e-10
Identity = 51/193 (26.42%), Postives = 87/193 (45.08%), Query Frame = 0


Query: 29  RAASKIAAAQICQSLGFQGSKESALDTLAEIVIVYLSNVGKMANFYSNLAGRTECNVFDI 88
           R   ++  + +    GF+ +++++++TL E++  Y+S +G+ A  Y     RT+  + DI
Sbjct: 34  RRTLQVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDI 93

Query: 89  VRGLKDLEALGSSQDAEVSRCLAGSRSIQEILEYMYSVQEIPFAQPVPQFPIIKNCNVLP 148
           V  L ++     +  A   R                S + +  A PV   P+        
Sbjct: 94  VVTLVEMGFNVDTLPAYAKR----------------SQRMVITAPPVTNQPVTPKALTAG 153

Query: 149 SFIQMRETPPSKHIPNWLPAFPDPHTYIYTPVWNKRTTDPRTDKIEQAKQRRKAEKSFLS 208
              Q R  PP  HIP+  P FPDPHTYI TP + +  +D +  + + A QRR  E++   
Sbjct: 154 ---QNRPHPP--HIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERAL-- 201

Query: 209 LQQRLVVDTGNIE 222
              R +  TG  +
Sbjct: 214 --TRFMAKTGETQ 201

[Close]

BLAST of Carg25551 vs. ExPASy Swiss-Prot
Match: Q9EQH4 (Transcription initiation factor TFIID subunit 8 OS=Mus musculus OX=10090 GN=Taf8 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.3e-10
Identity = 51/193 (26.42%), Postives = 87/193 (45.08%), Query Frame = 0


Query: 29  RAASKIAAAQICQSLGFQGSKESALDTLAEIVIVYLSNVGKMANFYSNLAGRTECNVFDI 88
           R   ++  + +    GF+ +++++++TL E++  Y+S +G+ A  Y     RT+  + DI
Sbjct: 32  RRTLQVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDI 91

Query: 89  VRGLKDLEALGSSQDAEVSRCLAGSRSIQEILEYMYSVQEIPFAQPVPQFPIIKNCNVLP 148
           V  L ++     +  A   R                S + +  A PV   P+        
Sbjct: 92  VVTLVEMGFNVDTLPAYAKR----------------SQRMVITAPPVTNQPVTPKALTAG 151

Query: 149 SFIQMRETPPSKHIPNWLPAFPDPHTYIYTPVWNKRTTDPRTDKIEQAKQRRKAEKSFLS 208
              Q R  PP  HIP+  P FPDPHTYI TP + +  +D +  + + A QRR  E++   
Sbjct: 152 ---QNRPHPP--HIPSHFPEFPDPHTYIKTPTYREPVSDYQILREKAASQRRDVERAL-- 199

Query: 209 LQQRLVVDTGNIE 222
              R +  TG  +
Sbjct: 212 --TRFMAKTGETQ 199

[Close]

BLAST of Carg25551 vs. ExPASy Swiss-Prot
Match: Q7ZYA2 (Transcription initiation factor TFIID subunit 8 OS=Xenopus laevis OX=8355 GN=taf8 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 5.6e-10
Identity = 51/194 (26.29%), Postives = 86/194 (44.33%), Query Frame = 0


Query: 29  RAASKIAAAQICQSLGFQGSKESALDTLAEIVIVYLSNVGKMANFYSNLAGRTECNVFDI 88
           R   ++  + +    GF  ++++A+++L E++  YLS +G+ A  Y     RT+  + DI
Sbjct: 24  RRTLQVVVSSLLTEAGFDSAEKAAVESLTEMLQSYLSEIGRSAKSYCEHTARTQPTLPDI 83

Query: 89  VRGLKDLEALGSSQDAEVSRCLAGSRSIQEILEYMYSVQEIPFAQPVPQFPIIKNCNVLP 148
           V  L ++     S  A   R                S + +  A PV   P++      P
Sbjct: 84  VVTLIEMGFNVDSLPAYAKR----------------SQRMVITAPPVTNNPVV------P 143

Query: 149 SFIQMRETPP-SKHIPNWLPAFPDPHTYIYTPVWNKRTTDPRTDKIEQAKQRRKAEKSFL 208
             +   +  P   HIP+  P FPDPHTYI TP + +   D +  + + A QRR  E++  
Sbjct: 144 KALSAGDNKPHPAHIPSHFPEFPDPHTYIKTPTYREPVCDYQVLREKAASQRRDVERAL- 191

Query: 209 SLQQRLVVDTGNIE 222
               R +  TG  +
Sbjct: 204 ---TRFMAKTGETQ 191

[Close]

BLAST of Carg25551 vs. ExPASy TrEMBL
Match: A0A6J1HGT6 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN=LOC111463420 PE=3 SV=1)

HSP 1 Score: 711.4 bits (1835), Expect = 2.1e-201
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0


Query: 1   MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV 60
           MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV
Sbjct: 1   MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV 60

Query: 61  IVYLSNVGKMANFYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEIL 120
           IVYLSNVGKMANFYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEIL
Sbjct: 61  IVYLSNVGKMANFYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEIL 120

Query: 121 EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180
           EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV
Sbjct: 121 EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180

Query: 181 WNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPR 240
           WNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPR
Sbjct: 181 WNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPR 240

Query: 241 KDAVSVAKSPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQF 300
           KDAVSVAKSPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQF
Sbjct: 241 KDAVSVAKSPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQF 300

Query: 301 KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL 360
           KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL 359

[Close]

BLAST of Carg25551 vs. ExPASy TrEMBL
Match: A0A6J1I6M5 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=LOC111471210 PE=3 SV=1)

HSP 1 Score: 694.9 bits (1792), Expect = 2.0e-196
Identity = 351/359 (97.77%), Postives = 355/359 (98.89%), Query Frame = 0


Query: 1   MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV 60
           MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV
Sbjct: 1   MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV 60

Query: 61  IVYLSNVGKMANFYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEIL 120
           IVYLSNVGKMA+FYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEIL
Sbjct: 61  IVYLSNVGKMASFYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEIL 120

Query: 121 EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180
           EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPD HTYIYTPV
Sbjct: 121 EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDSHTYIYTPV 180

Query: 181 WNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPR 240
           WNKRTTDPRTDKIEQAKQRRKAEKS LSLQQRLVVDTGNI+EELPILNSNTSHDSEL+PR
Sbjct: 181 WNKRTTDPRTDKIEQAKQRRKAEKSLLSLQQRLVVDTGNIKEELPILNSNTSHDSELKPR 240

Query: 241 KDAVSVAKSPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQF 300
           KDAVSVAK PLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDD+EGEKKDLPT RHPVQF
Sbjct: 241 KDAVSVAKLPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDEEGEKKDLPTIRHPVQF 300

Query: 301 KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL 360
           KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL 359

[Close]

BLAST of Carg25551 vs. ExPASy TrEMBL
Match: A0A6J1HH35 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN=LOC111463420 PE=3 SV=1)

HSP 1 Score: 640.2 bits (1650), Expect = 5.9e-180
Identity = 330/359 (91.92%), Postives = 330/359 (91.92%), Query Frame = 0


Query: 1   MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV 60
           MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV
Sbjct: 1   MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV 60

Query: 61  IVYLSNVGKMANFYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEIL 120
           IVYLSNVGKMANFYSNLAGRTEC                             SRSIQEIL
Sbjct: 61  IVYLSNVGKMANFYSNLAGRTEC-----------------------------SRSIQEIL 120

Query: 121 EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180
           EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV
Sbjct: 121 EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180

Query: 181 WNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPR 240
           WNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPR
Sbjct: 181 WNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPR 240

Query: 241 KDAVSVAKSPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQF 300
           KDAVSVAKSPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQF
Sbjct: 241 KDAVSVAKSPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQF 300

Query: 301 KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL 360
           KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL 330

[Close]

BLAST of Carg25551 vs. ExPASy TrEMBL
Match: A0A6J1IAQ7 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=LOC111471210 PE=3 SV=1)

HSP 1 Score: 623.6 bits (1607), Expect = 5.7e-175
Identity = 322/359 (89.69%), Postives = 326/359 (90.81%), Query Frame = 0


Query: 1   MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV 60
           MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV
Sbjct: 1   MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV 60

Query: 61  IVYLSNVGKMANFYSNLAGRTECNVFDIVRGLKDLEALGSSQDAEVSRCLAGSRSIQEIL 120
           IVYLSNVGKMA+FYSNLAGRTEC                             SRSIQEIL
Sbjct: 61  IVYLSNVGKMASFYSNLAGRTEC-----------------------------SRSIQEIL 120

Query: 121 EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180
           EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPD HTYIYTPV
Sbjct: 121 EYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDSHTYIYTPV 180

Query: 181 WNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPR 240
           WNKRTTDPRTDKIEQAKQRRKAEKS LSLQQRLVVDTGNI+EELPILNSNTSHDSEL+PR
Sbjct: 181 WNKRTTDPRTDKIEQAKQRRKAEKSLLSLQQRLVVDTGNIKEELPILNSNTSHDSELKPR 240

Query: 241 KDAVSVAKSPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQF 300
           KDAVSVAK PLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDD+EGEKKDLPT RHPVQF
Sbjct: 241 KDAVSVAKLPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDEEGEKKDLPTIRHPVQF 300

Query: 301 KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL 360
           KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL 330

[Close]

BLAST of Carg25551 vs. ExPASy TrEMBL
Match: A0A5D3C832 (Transcription initiation factor TFIID subunit 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00220 PE=3 SV=1)

HSP 1 Score: 605.5 bits (1560), Expect = 1.6e-169
Identity = 305/360 (84.72%), Postives = 328/360 (91.11%), Query Frame = 0


Query: 1   MSHGGGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQSLGFQGSKESALDTLAEIV 60
           MSHGGG ITRE ENQVDRFRR G DDFGR  SKIAAAQICQSLGFQGSKESA+DTLAEIV
Sbjct: 1   MSHGGGNITRENENQVDRFRRGGGDDFGRQVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60

Query: 61  IVYLSNVGKMANFYSNLAGRTECNVFDIVRGLKDLEALGSS-QDAEVSRCLAGSRSIQEI 120
           +VYLS++GKMA+FYSNLAGRTECNVFDIVRG KDLEA GSS QDAEVSRCLAGSR+IQEI
Sbjct: 61  VVYLSDLGKMASFYSNLAGRTECNVFDIVRGFKDLEAPGSSHQDAEVSRCLAGSRTIQEI 120

Query: 121 LEYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTP 180
            EY+ SVQEIPFAQPVPQFPIIK+C VLPSFIQM+ETPPSKHIPNWLPAFPDPHTYIYTP
Sbjct: 121 FEYVNSVQEIPFAQPVPQFPIIKSCKVLPSFIQMKETPPSKHIPNWLPAFPDPHTYIYTP 180

Query: 181 VWNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQP 240
           VWNKRTTDPRTDKIEQA+QRRKAEKS LSLQQRL+V+TGN+EEELP  +SNTSHD ELQP
Sbjct: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLIVNTGNLEEELPSFDSNTSHDIELQP 240

Query: 241 RKDAVSVAKSPLKHSDHVFDDSGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQ 300
           R++ VS  KS LKHSD+VFD+S  VLEAFAP IEAVKGSGFYDD+EGEKK LP  R  VQ
Sbjct: 241 RENVVSAVKSSLKHSDNVFDESSHVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPVVQ 300

Query: 301 FKFKTGKKLLGDSLDLNIQKKGISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL 360
           FKFKTGKKLLGDSLDLNIQKKG+ RT  LVGR DERDD+KRRAEYILR+S+ENPQELNQL
Sbjct: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360

[Close]

BLAST of Carg25551 vs. TAIR 10
Match: AT4G34340.1 (TBP-associated factor 8 )

HSP 1 Score: 260.0 bits (663), Expect = 3.2e-69
Identity = 147/339 (43.36%), Postives = 214/339 (63.13%), Query Frame = 0


Query: 26  DFGRAASKIAAAQICQSLGFQGSKESALDTLAEIVIVYLSNVGKMANFYSNLAGRTECNV 85
           +F  AA+K A AQ+C+S+G++  K+ AL++L+   + Y+  +GK A  ++NL GR++CNV
Sbjct: 25  EFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQYILQLGKTATSFANLTGRSQCNV 84

Query: 86  FDIVRGLKDLEALGSSQDAEVSRCLAG-SRSIQEILEYMYSVQEIPFAQPVPQFPII--- 145
           FDI+  L DL      Q      C  G S  ++EI++++ S +E+PF+QP+P FP+    
Sbjct: 85  FDIILALDDLTDNNGEQGISSESCSLGRSIKLREIIDFVNSSEEVPFSQPLPSFPVAISD 144

Query: 146 KNCNVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPVWNKRTTDPRTDKIEQAKQRRK 205
           ++  ++PSF+++ ETPP KHIP WLPAFPDPHTY  TP+W +R +DPR DKIEQA+QRRK
Sbjct: 145 RSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKETPMWIERVSDPRGDKIEQARQRRK 204

Query: 206 AEKSFLSLQQRLVVDTGNIEEELPILNSNTSHDSELQPRKDAVSVAKSPLKHSDHVFDDS 265
           AE++ LSLQ++LV     I    P+         E++  +  +    S  K  + +  D 
Sbjct: 205 AERALLSLQRKLVC---KISSRNPVWGDMDGVKEEMRDDESELRSVSSGEK-VESLNRDG 264

Query: 266 GSVLEAFAPVIEAVKGSGFYDDDEGE-KKDLPTTRHPVQFKFKTGKKLLGDSLDLNIQKK 325
            SV+EAFAP +EA +  GF  +   E KK+ P        K +T KK LG  LDL++Q K
Sbjct: 265 LSVIEAFAPAMEAAR-DGFSSEAHTEWKKNKPVALS----KLRTEKKFLGQPLDLSLQMK 324

Query: 326 GISRTTVLVGRYDERDDRKRRAEYILRKSMENPQELNQL 360
           G  R    V R ++RDD++RRAE+ILR+ MENP +LNQL
Sbjct: 325 GEDRPISFV-REEDRDDKRRRAEFILRQCMENPVDLNQL 353

[Close]

BLAST of Carg25551 vs. TAIR 10
Match: AT5G15570.1 (Bromodomain transcription factor )

HSP 1 Score: 138.7 bits (348), Expect = 1.1e-32
Identity = 110/363 (30.30%), Postives = 171/363 (47.11%), Query Frame = 0


Query: 5   GGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQS---------------LGFQGSK 64
           GG   RE++ +    R    +DF  A +++A AQIC+S               L F   +
Sbjct: 8   GGSQRRELQGKRSMSR---GNDFAYALARMATAQICESVEINSYQESSQSREGLRFSSFQ 67

Query: 65  ESALDTLAEIVIVYLSNVGKMANFYSNLAGRTECNVFDIVRGLKDL-EALGSSQDAEVSR 124
           E+AL+TL ++VI Y+ N+GK A FY N+AGR E N  DIV+ L+DL   LG     +V  
Sbjct: 68  ETALETLTDVVIQYIQNIGKTAQFYVNMAGRVESNALDIVQALEDLGSGLGFDGAHDVEH 127

Query: 125 CLAGSRSIQEILEYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPA 184
           CLA S  +++I+ Y    +EIPF   +P+FP  +     PSF  +   PP +HIP WLPA
Sbjct: 128 CLADSGVVKDIIRYTGEAEEIPFVYSLPRFPFNRGKRPAPSFSDIGVEPPDEHIPVWLPA 187

Query: 185 FPDPHTYIYTPVWNKRTTDPRTDKIEQAKQRRKAEKSFLSLQQRLVVDTGNIEEEL---- 244
           FP+          +  + +   DKIE+  Q R    S +S+QQ + VD   +++ +    
Sbjct: 188 FPETK-------MSNGSEEINVDKIERDVQSRDNGSSLMSVQQSVDVDRLKVQKSMDQKD 247

Query: 245 -----------PIL-------NSNTSHDSELQP---RKDAVSVAKSPLKH---SDHVFDD 304
                      P L         N S    + P   RK+ +S    P KH   S H+   
Sbjct: 248 VQKPIEEPEGNPFLAAPIWVGEKNVSLSRVVCPSELRKEEISTNHLPEKHMSMSHHI--- 307

Query: 305 SGSVLEAFAPVIEAVKGSGFYDDDEGEKKDLPTTRHPVQFKFKTGKKLLGDSLDLN--IQ 322
               LEA+A   +    +     ++ +K+D   T+  +  +FK G +   +   +N  ++
Sbjct: 308 --PALEAYALSDKINDKNRLAGMEDEQKRDGARTQGAL-LRFKIGTRKASECWKINQCLE 354

[Close]

BLAST of Carg25551 vs. TAIR 10
Match: AT3G02160.1 (Bromodomain transcription factor )

HSP 1 Score: 127.5 bits (319), Expect = 2.5e-29
Identity = 68/182 (37.36%), Postives = 104/182 (57.14%), Query Frame = 0


Query: 5   GGKITREIENQVDRFRRAGADDFGRAASKIAAAQICQS--------------LGFQGSKE 64
           GG   RE+  +   FR    +DF  + +++A AQIC+S              + F   +E
Sbjct: 24  GGSQQRELHGKRKLFR---GNDFAFSIARMAVAQICESVEVNPYQESQTREGVRFSSFQE 83

Query: 65  SALDTLAEIVIVYLSNVGKMANFYSNLAGRTECNVFDIVRGLKDL-EALGSSQDAEVSRC 124
           SALDTL ++ + Y+ ++GK A+ Y+NLAGR + N  DI++ L+DL   LG +  ++   C
Sbjct: 84  SALDTLTDVAVQYIQSIGKTAHLYANLAGRVDGNSLDILQALEDLGSGLGFAGVSDTDHC 143

Query: 125 LAGSRSIQEILEYMYSVQEIPFAQPVPQFPIIKNCNVLPSFIQMRETPPSKHIPNWLPAF 172
           LA S  +++I+ Y    +EIPF   +P+FP  K     PSF ++   PP +HIP WLPAF
Sbjct: 144 LADSGVVKDIIRYTGEAEEIPFVYSLPRFPFSKEKKPAPSFSEVGAEPPDEHIPVWLPAF 202

[Close]

BLAST of Carg25551 vs. TAIR 10
Match: AT1G31240.1 (Bromodomain transcription factor )

HSP 1 Score: 91.7 bits (226), Expect = 1.5e-18
Identity = 51/153 (33.33%), Postives = 86/153 (56.21%), Query Frame = 0


Query: 26  DFGRAASKIAAAQICQSLGFQGSKESALDTLAEIVIVYLSNVGKMANFYSNLAGRTECNV 85
           +F  + +KIA +QICQS+G++ +  SAL+TL      +L ++ ++A+ +SN A RTE N+
Sbjct: 25  EFSFSLTKIAVSQICQSIGYKATDASALNTLTLTTTKFLQSLAELASSFSNTANRTEVNL 84

Query: 86  FDIVRGLKDLEAL-------GSSQDAEVSRCLAGSRSIQEILEYMYSVQEIPFAQPVPQF 145
           FDIV GL+D+          GS+     S+CL  S  ++ + +++    EIPFA+P+P+ 
Sbjct: 85  FDIVNGLQDIALSTSDCFPGGSTVHDIESQCLIKSAVLRNLSDFVTYAPEIPFAKPLPRR 144

Query: 146 PIIKNCNVLPSFIQMRETPPSKHIPNWLPAFPD 172
               +       + +  +     +P WLP FPD
Sbjct: 145 ERDGSFGGDLDHVAVTRSVDVTSVPAWLPPFPD 177

The following BLAST results are available for this feature:

BLAST of Carg25551 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027250.1	2.0e-230	100.00	Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma...	[more]
XP_022963117.1	4.3e-201	100.00	transcription initiation factor TFIID subunit 8-like isoform X1 [Cucurbita mosch...	[more]
XP_023517598.1	2.4e-196	97.77	transcription initiation factor TFIID subunit 8-like isoform X1 [Cucurbita pepo ...	[more]
XP_022972681.1	4.2e-196	97.77	transcription initiation factor TFIID subunit 8-like isoform X1 [Cucurbita maxim...	[more]
XP_022963120.1	1.2e-179	91.92	transcription initiation factor TFIID subunit 8-like isoform X2 [Cucurbita mosch...	[more]

BLAST of Carg25551 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYZ9	4.5e-68	43.36	Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 ...	[more]
A7MAZ4	2.5e-10	26.42	Transcription initiation factor TFIID subunit 8 OS=Bos taurus OX=9913 GN=TAF8 PE...	[more]
Q7Z7C8	2.5e-10	26.42	Transcription initiation factor TFIID subunit 8 OS=Homo sapiens OX=9606 GN=TAF8 ...	[more]
Q9EQH4	3.3e-10	26.42	Transcription initiation factor TFIID subunit 8 OS=Mus musculus OX=10090 GN=Taf8...	[more]
Q7ZYA2	5.6e-10	26.29	Transcription initiation factor TFIID subunit 8 OS=Xenopus laevis OX=8355 GN=taf...	[more]

BLAST of Carg25551 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HGT6	2.1e-201	100.00	Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1I6M5	2.0e-196	97.77	Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HH35	5.9e-180	91.92	Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IAQ7	5.7e-175	89.69	Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5D3C832	1.6e-169	84.72	Transcription initiation factor TFIID subunit 8 OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of Carg25551 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34340.1	3.2e-69	43.36	TBP-associated factor 8	[more]
AT5G15570.1	1.1e-32	30.30	Bromodomain transcription factor	[more]
AT3G02160.1	2.5e-29	37.36	Bromodomain transcription factor	[more]
AT1G31240.1	1.5e-18	33.33	Bromodomain transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006565	Bromodomain associated domain	SMART	SM00576	17neu3	coord: 25..100 e-value: 1.8E-19 score: 80.7
IPR006565	Bromodomain associated domain	PFAM	PF07524	Bromo_TP	coord: 29..95 e-value: 2.2E-17 score: 62.8
IPR019473	Transcription factor TFIID, subunit 8, C-terminal	PFAM	PF10406	TAF8_C	coord: 161..209 e-value: 1.1E-19 score: 70.8
IPR019473	Transcription factor TFIID, subunit 8, C-terminal	CDD	cd08049	TAF8	coord: 161..213 e-value: 8.75241E-24 score: 91.1803
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 23..108 e-value: 4.6E-18 score: 66.7
None	No IPR available	PANTHER	PTHR46338:SF1	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8	coord: 1..359
IPR037818	Transcription initiation factor TFIID subunit 8	PANTHER	PTHR46338	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8	coord: 1..359

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25551-RA	Carg25551-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005669	transcription factor TFIID complex
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0003743	translation initiation factor activity