Carg25373 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25373
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	zinc finger CCCH domain-containing protein 5
Location	Carg_Chr16: 5175955 .. 5183513 (-)
RNA-Seq Expression	Carg25373
Synteny	Carg25373

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCGTTTTGGTGTGGATGTTCAATCTTGCACACGATTGAATTCCTGTGTCACTCCCGCAACGCGACGAGTCGGTCTTTCGTTGCTCTGCTTGGAATTGGAACTCCATTTTGGAGCCCCCACTGCGGAATTTTGCGAGCGTAATGGAGGAGCCTGAATTCGTAGGAGAAGAAGAAGAGAAGCCTCAGGGTACTGAAGCTGGCTCGATTGAGAAGCCATGTTCGTTGGAGAATCTGTGCAGGAAGGAGAAGAGGAAGGCGTTGAAGAAGATCAAACGCAAGCAATTAAGAAAAGAGGAGGCGCTGAAAAAGCTACAGGAGGAGGAGGCGCGGTTGAACGATCCTGAAGAGCAGAGGAGGATTCGGTTGATGGAGCTGGAGGAGGAGGAGAGGTCGGAGAGGGAGAGGAAGCTCTTTGAGGAGCGTGAAAGAGCTTGGTTGGAGGCTATGGAGTTGAAGAAGAAGACGATGGCTGAGGAGGAAGAAGAAGAGCAGCGAAGGAGAGCGCTGGAAGAAGAATCGACGGCGCGGCAGGTTTTTCTTTCTCTTCTTGTGATTCTCTAGTTTTTGTATTTTTGTCTTTGTTTTTGAACAGTACTCGTAGCCTGTTGATAGATTTGCAGTTAGATTTCAGCTTTATAGTGCATGATTATTGGCTCAGTTTCCTCGATACATAGAAAACATCATTTGAAATTCTTGTAACAGAAACTGCGATCGCCTCCTATCGCTATATCGTTGCTCATAGTTCTCCTCTTGTTTTAGCGGAGGAAAATTGTTCAATTCACCAGTTTGTAACCTTCTTTTGTAGGCTGAAAATGAAAACGAGTTAAGTGAGGAAGATGGTTGGGAATACATTGAAGGGCCTGCAGAAGTAATCTGGAAAGGAGATGAGATAATTCTGAAGAAGAAACTAATTAAGGTTCCTAAGAAGGGCGTTGAACCTGAGAAAAGCCTTGAGGTATCGGTTCTGCAACCAGGATATTATTGTTCTCTAGATCATCGTTGTTTATGTTAAAAAATTCTTTTCCTGGGACGTAGCAGTGAAAATTCTTATGATCATAGATATATATTTTCTTTTTGTAGGATGCGCATAGGCCTACATCAAACCCTCTTCCTCCGCAATCTGAAGATATTACAGATTGTAAGAATGCACCAATTTCAACTAGACAAGTGATTGATGATGTTGCAAGCCAAGTGCCAAACTTTGGAACTGAACAGGCATCTCTCTCTCTCTCTTTATTTTTCTCTCTGTACCTATTATCTGTACTTACTTACTCCTTCTCAAGTAGTTCTATAGCTATTCAATTGTCATCTTGATAAATAAGCTTTACCTATTTTTTTTTTTTATTACAACAGGATAAATCACATTGTCCATTCCATTTAAAAACTGGAGCTTGTCGATTTGGTCAGCGTTGTAGCCGAATTCACTTCTACCCTGACAAATCGTGTACATTGCTTATCAAGAACATGTATAATGGTCCTGGCCTTGCTTGGGAGCAAGACGAGGGGCTGGAGGTCTGTTAATGATGCTCATACAATTATTGTATCCTCAAAATAACTTTGAAATATTGCTATTGCTATTGCATCAATCTGAAATTGTTTTGAACGACTTGTTTAGGAGATACCTAAAATTTTAGCTCTATATATGACTGTTTAGGTATGAATTGTTTCCATATATCCATGGAATTATTTTTATGATTAGACTAGTAAGCATTAATGATTATATTAACTTGTTTTGGTACATTTTATGATTAGAGAATTCACGAAACTACATGTAATGTTTCTACTTTTGTGGTCTTCGCATGTTTATTTTGTGTGGAAGGAAGGAGATCATGAAACCTTATCTATCACCCTCTTTCTGGCGTTCTTGCCTTCTCGGGTTACTATAGAGTTCCTTTATCAATTCATTGATTGAAGCTGTTAAAATTTAAAATTGATTTATCTGTTTATTGTAATTTTCACCTTACATCCTAAAGGCTTTACTTTGGATACAAGACGTGATCTTTGTTGAAATAATTTATGAAGCTTAGTTCTTGCCAATTTGGCGACTGGAAAAATTTATCTTTGTAGTCAATCGCTTGCTTAGGTGTTTAATGCAACCATGATACTGAGATTCATCATGTTGTAAATGTTGGTGGCATTGATATTTAATATCCTTCATTTATTTTTCTTTCAAATTTCTTGACCTACTTTATATCAGAGAACTACTGCAAGAATTGTGTCAAATTGTCATGGAGGGTTACAGTTTTGCTCTTGAGTTCCTTTGGAGTTGATAATACGATAACGAATTTTGTATCCTACTTACATTGTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTGCTATTTATCCCATTCTTTCTCTGTTGAAAATGTTGAAGTTGAAGTTGTCATAGTTAATTTTTATTATTTTGTGGACTCTTTTTTCTGCATGCAGCTAAGGAAATTTAGTTGTAATAGCCGTAAACTTTTGATCCAGTGTCACTGTCATAATTCTAAGACTAGTACTAACCCGTTGTTGAGTGGTCATTCTTCAAGAGGCAAGCTAAGTTTGGGTGGGAGCACCAAATTACAATGGAACTCCACCCATACTGACTACTACAATCTCTAGTGTGTTTGGGTGGCTTATAATTGTTAACTAAGTTGTGTATATATATATATATATTGTGATCTAGTGTCACTGTTATAATTCTAAGCTAATACTAACCTGTTGTTGAGGGGTTATTCTTCAAGGGGAAAGCTAAGTTTGGGTGTGCTATAAGAGCCATCTTATGGGGTTCTTTGGAAGGAAAGATTAGTTAGAGTTTTGAAAATAAACATAGCAATCGACCCAAAACTTAAAGTAATAAGTTAATAGTAAATTTAATTATTTCAATGCTTCACTTGTGGTTGTGCAATTTTATAGAAGGCCGAACAAGTGGAAATTAATAATAATTAGAGAGCAGAAGGCATTATAAGAGTTTGAACACAGGATCTTCGGATCTGATACCTTGTCAAATAACCAATCAACTCAAAATCTTAAGTTGATGAGTTGCAACATTTTAACACTCCTCAGTGTACCTACTTCTGGTGTCATGCAGTGATATAAGAAGCCTACTTGTTTTTATTTGTTTCTTTTCTCCCCTCTGATGCGTTAAAACAATTATGTGCGCTTAGATGGGAAACGTCTTCGATAACTCTAAATTGTTCATAACACTCTTTTTTCTCACTTGAACAAAACTAGAGATATATCCATTTTTTTAACAGTCTAGAGGGACTGTTTAAATTCCTATTTCTTCCTTAGATGTCAAAACTTTACCTTAATTACATCTAGACTTTACTAAGCTCAGGTAGTGGCACAGCATAATTATGACCTATTTGGAGTGATCATGGATGGCACCCGGATTTGACATAGCATGTTTCAATTGGAGTTGTATGGGGTTCTGAAATGGAAATTGTTGGACTAAGATTTCACCTTTTCCCTTTCAATTATCTATTTGGAATTTCTTGTGGCGAGTTGCATTCTAGATTGACTTTTACTCTACCTTTATTCAGTTTGCAGATGAGGAAGTTGAATGCTGTTATGAAGAATTTTATGAGGATGTGCATACTGAGTTCTTGAAGTATGGGGAAATTGTAAATTTCAAGGTCTCCTCGTTTGGTACCTTGTTGTTTGTACGCTTTATATATGCTTTTGTTTTATTTTATCTTTTGTTTATTTGAGCAGTGAGAACATTCTAATAATGGGTTGGTTTTTTTATAATTGACCTCAAAATCGCACTTGTTTACAGTGAGACTATTTATCATCAATCCTAAATATTGTATTTTCATTCAGGTGTGTAAAAATGGCTCTTTCCACTTGAGGGGAAACCTGTATGTGCACTATAAGTCATTGGATTCAGCTGTGCTTGCTTATAATGCCAACAATGGTCGTTTCTATGCAGGGAAACAGGTACTGATTTCTCCAATTATCCTCACTATGACTAAGAATCGTTGAATAGATGAAGATATCTGTCCAGCCTCTAAATCCTCCTTAGCAACATACACTGTAGGGTTTACAGCAAGATATTCTAAACTTTTGAATTTTATCCATAATATGAAGTTTCCCGTTAGCGTCAGTTCAGGTCTAAACAAAGAAAGAAAGTTCTCTTGAGAGCACCCAGCTTTATTTAGCTCTTAAAAAGGAATGGGCTTTGGAATCCATGGCGACGATACCAAGAATGGAAAGAAAATACTGGAGTTCATGAACTTAAAACTGATCCAGATCCCCTATGATTTCATTGATTCAAAGAATTATTCCTTGAATGTGGGTGCTCCATATGCTTTATTTGTCTGAGAAGATTATTAAGCTTGGTCTGTGTTCTGGAAAATGTACGCAAAATAAAATCTCATGAACAAATAAAGCAAACAATACTTACCAATTCATGTTGATGGTGCCTCATGGCCAAATTTATAAAAAGTTCTCTTACAGATACCATTTGTTTATGGTACTGCGCATAGCTGAGCTAGTAATTTCTCCTCCATCCTTCTACAATGTTTGTTCGGGATTTTTTTTTTTTTTAAAGAATTCTGTAACTGTTGGTTCTTTGTTTAACTTCTCCCAAGTGTGTGGCTCTCTCTCCTTCCCTCCTTTTTTTCCTCAGCATGGCTTTGAAGTGGTGTTATGTGTTGTTCATCTGGGGCTTTTCTTTATGACAGGTAATATGTGAATTTGTAAATGTTACCAGATGGAAGATAGCAATATGTGGGGAATTTATGAAGACAAGGTACCAGGTACTGAAGTTCTTCTACTTTTTCATATAATTTAAAACTAATTATCTTCGTTGAAGTTCTTGTCACCGTGCCGTTATTGATGGTTTCGTTGCTTCTTCTCAGACATGTTCTCATGGAACAGCTTGTAATTTCATTCACTGTTTTCGAAATCCTGGTGGGGACTATGAATGGGCTGATAGTGACAAACCTCCCCCACGGTATTGGGTGAAAAAGATGGCTTCTCTGTTTGGTTATTTAGATGAATCCGAAAATGAAAAACATACTGAGCTTGAACACTGGGACAAGTTTGGAAAATCCAGCAGGTCAATGTCAACAGATGTCGACAGGTATTCACGCGGAGTAACTATGATCTAAAACGTCTCGTTTTTCACTGTTCCTTTTGTTTTCTTAATTCTCAATTTCTTAAAATCCAATATCCATCATTCAGCGTCCTCTATTTTGATAACGCTTGATTGATTTAAGTTTTCTTAGTAGCAACTTTTTCCAGACAGTTTCTTCCCTGGTAGCTTGTTTGGACTTCAAAGGGGATAGCTTTCTGGCCGTTCATTCTCTAAGCTAACTTTTATACGTGATCTTGCGTCTAGATAATCCCAGCCATCTTTCTTTTCTTCACAAGCTCAGACATCTTATATTAGTATGAGCTTTTTTTTGGCCAGCCATCTTATATTAGGATGAGCTTTTATACGTGATCTAGCGTCTAGATAATCCCAGCCATCTTTCTTTTCTTCACAAGCTCAGACATCTTAACTAGAAGGGCCTGAGTTTGGTAACGAGGATGTGCTTTTTTTTGGCCAGACAGTTTATTCATATCTGTGGGACATAAATTTAATGTACATATGTACTTGTATACCATTTATGTAACGGCCTAGATCCACCGCTAGCAGATATTGTCCTCTTTGAGCTTTTCCTTTCGGGCTTACCCTCAAGGCTTTAAAACGCGTCTGCTAGGGGAAGGTTTCCACACCCTTATAAATGGTGGTTTGTTCTCCTCCCCAACCAATGTGGGACATCACAATCCATCCCCCTTCGGGGCCCAGTGTCCTCGTTGGCACTCTTTTCTTCCTCCAATCAATGTGGGACCACCTCCAAATCCACCCCCTTTGGGGCCAGCGTCCTTACTGGCACACTGCCTCGTGTCTACCCCCTTCGGGAAACAGCGAGAAGGCTGACACATCGTTCGGTGTCTGGCTCTGATACCATTTGTAACGGCCTAGATCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTACCCTCAAGGCTTTAAAACGCGTCTGCTAGAGGAAGGTTTCCACACCATTACCCTTATAAATGGTGGTTTGTTCTCCTCCAACTAACATCCCTTATAAATGGTGGTTTGTTCTCCTCCAACGAACACCCAGTTTATCACCAATAATTTTTTCAATTTACCATTATTGGAAGTTCAATGTTTTATGACTTCAATTTCTTATTCTTCATGATAGATATCATTCAAGAAGATCTAAATCTAGAAGTCTGGACCATGGCTCCAGAAGAAGTAAAAACAGTGAAAATGACTATAGAAGGCACTCTCGTAGAGAAAAAGTTCACGAGAAGCAGCAAAGTTCGGATAAGGAAGAATATGAGCAGGCAAACCTAAAATATTACCACCGGAGAAACAACAGATTTAATGATGCAGATTCTAATGAATCAGCGGATAAGTTTGACGAGAGAAGCAAAGATAGAGAACGTGGTAGGAGATCACGAGTTCGAAATGCAGATCATGATGACAGCAAGAACACATCAAATGAAACTGATGAAGGCTGGTCAAGTGGTGATGGGAACAAATATGGGCATCGACACCAAAGAAGGAAAAGCAATGGGCACGTTTCCGAGACGTTTAAAACCACAGGTGGTTCTCCAAGCCAGAGCGCAATCAGTGATCACGATACACGTGGAATTTCTTCTGACAGAAACAAGGAAAGGCGTGTTTCGTATGGTGGAAAACCCAAGAAACGCTGGGATGAGGTTACTAAAGATTCTAATGACCAGTTGAAACAGAAATCTAAGTTGGAGACTGATTATGTAAGCAAGAAGTTCAGCTTAAGAAAATCCAGTAGTCTCCTATCAGATGGGAGACAGGAGCAGTCTATTTCAGATCGATATCTTGAGAGGTCCGAACCAATGAATCTCGACAAAGAATACTGTAACAACGAGCACATTGACAAGGAAGGCCGATGGGATCCTGGAAGAAGTTATGATGAATTCGAAAAATGTAGCGAGAGTACAAGCGTTATGCACTCCGAGGCTGGAAGCCCTGTTCGCCAAGGTGAAAGATTTAAATCAGATGTTCTTGGTAGAGTAGACTACTATGGTAACAAAGTTAACAAGCGAAATCATAGGGAACTGAAAAGCAGTGATTCCTATGAACAACGAACGTCTCGAAGAAAGTCTTCTCGGCCTGATGATGATCAGAATTTCAGTGATTTAAAATACGATAACACGAACACCAACTAGGATTATCTTCAGAAAAGTCCTAGGAGCCCAGGCAGACATAGTAAGAAAAGAAAACCACCAGAAAACCACCAAGAATCCCAAAAGATCGATCGGAACCTTCCGTGTCGTATAATTTATGCTTCCAAAGTCGTGATCATATTTCAAAGGGCGAGAGAAGTCGATTTGACCCACACGGGGCTCAGCTAAACCAACCTTTTGTTTGCCCGTTTCATATTTGCCATATATTTGTTGAAAATCTATTTTTGCCTTACTCACATTCCTACTTCCTTCTAAGACGAGTTTCATGCATCAAATTTCCATTCAAGTTAAAAGTTTCACATTTACC

mRNA sequence

CCCGTTTTGGTGTGGATGTTCAATCTTGCACACGATTGAATTCCTGTGTCACTCCCGCAACGCGACGAGTCGGTCTTTCGTTGCTCTGCTTGGAATTGGAACTCCATTTTGGAGCCCCCACTGCGGAATTTTGCGAGCGTAATGGAGGAGCCTGAATTCGTAGGAGAAGAAGAAGAGAAGCCTCAGGGTACTGAAGCTGGCTCGATTGAGAAGCCATGTTCGTTGGAGAATCTGTGCAGGAAGGAGAAGAGGAAGGCGTTGAAGAAGATCAAACGCAAGCAATTAAGAAAAGAGGAGGCGCTGAAAAAGCTACAGGAGGAGGAGGCGCGGTTGAACGATCCTGAAGAGCAGAGGAGGATTCGGTTGATGGAGCTGGAGGAGGAGGAGAGGTCGGAGAGGGAGAGGAAGCTCTTTGAGGAGCGTGAAAGAGCTTGGTTGGAGGCTATGGAGTTGAAGAAGAAGACGATGGCTGAGGAGGAAGAAGAAGAGCAGCGAAGGAGAGCGCTGGAAGAAGAATCGACGGCGCGGCAGGCTGAAAATGAAAACGAGTTAAGTGAGGAAGATGGTTGGGAATACATTGAAGGGCCTGCAGAAGTAATCTGGAAAGGAGATGAGATAATTCTGAAGAAGAAACTAATTAAGGTTCCTAAGAAGGGCGTTGAACCTGAGAAAAGCCTTGAGGATGCGCATAGGCCTACATCAAACCCTCTTCCTCCGCAATCTGAAGATATTACAGATTGTAAGAATGCACCAATTTCAACTAGACAAGTGATTGATGATGTTGCAAGCCAAGTGCCAAACTTTGGAACTGAACAGGCATCTCTCTCTCTCTCTTTATTTTTCTCTCTGTACCTATTATCTGATAAATCACATTGTCCATTCCATTTAAAAACTGGAGCTTGTCGATTTGGTCAGCGTTGTAGCCGAATTCACTTCTACCCTGACAAATCGTGTACATTGCTTATCAAGAACATGTATAATGGTCCTGGCCTTGCTTGGGAGCAAGACGAGGGGCTGGAGGTCTAGAACTACTGCAAGAATTGTGTCAAATTGTCATGGAGGGTTACAGTTTTGCTCTTGAGTTCCTTTGGAGTTGATAATACGATAACGAATTTTATTGACTTTTACTCTACCTTTATTCAGTTTGCAGATGAGGAAGTTGAATGCTGTTATGAAGAATTTTATGAGGATGTGCATACTGAGTTCTTGAAGTATGGGGAAATTGTAAATTTCAAGGTGTGTAAAAATGGCTCTTTCCACTTGAGGGGAAACCTGTATGTGCACTATAAGTCATTGGATTCAGCTGTGCTTGCTTATAATGCCAACAATGGTCGTTTCTATGCAGGGAAACAGGTAATATGTGAATTTGTAAATGTTACCAGATGGAAGATAGCAATATGTGGGGAATTTATGAAGACAAGGTACCAGACATGTTCTCATGGAACAGCTTGTAATTTCATTCACTGTTTTCGAAATCCTGGTGGGGACTATGAATGGGCTGATAGTGACAAACCTCCCCCACGGTATTGGGTGAAAAAGATGGCTTCTCTGTTTGGTTATTTAGATGAATCCGAAAATGAAAAACATACTGAGCTTGAACACTGGGACAAGTTTGGAAAATCCAGCAGGTCAATGTCAACAGATGTCGACAGATATCATTCAAGAAGATCTAAATCTAGAAGTCTGGACCATGGCTCCAGAAGAAGTAAAAACAGTGAAAATGACTATAGAAGGCACTCTCGTAGAGAAAAAGTTCACGAGAAGCAGCAAAGTTCGGATAAGGAAGAATATGAGCAGGCAAACCTAAAATATTACCACCGGAGAAACAACAGATTTAATGATGCAGATTCTAATGAATCAGCGGATAAGTTTGACGAGAGAAGCAAAGATAGAGAACGTGGTAGGAGATCACGAGTTCGAAATGCAGATCATGATGACAGCAAGAACACATCAAATGAAACTGATGAAGGCTGGTCAAGTGGTGATGGGAACAAATATGGGCATCGACACCAAAGAAGGAAAAGCAATGGGCACGTTTCCGAGACGTTTAAAACCACAGGTGGTTCTCCAAGCCAGAGCGCAATCAGTGATCACGATACACGTGGAATTTCTTCTGACAGAAACAAGGAAAGGCGTGTTTCGTATGGTGGAAAACCCAAGAAACGCTGGGATGAGGTTACTAAAGATTCTAATGACCAGTTGAAACAGAAATCTAAGTTGGAGACTGATTATGTAAGCAAGAAGTTCAGCTTAAGAAAATCCAGTAGTCTCCTATCAGATGGGAGACAGGAGCAGTCTATTTCAGATCGATATCTTGAGAGGTCCGAACCAATGAATCTCGACAAAGAATACTGTAACAACGAGCACATTGACAAGGAAGGCCGATGGGATCCTGGAAGAAGTTATGATGAATTCGAAAAATGTAGCGAGAGTACAAGCGTTATGCACTCCGAGGCTGGAAGCCCTGTTCGCCAAGGTGAAAGATTTAAATCAGATGTTCTTGGTAGAGTAGACTACTATGGTAACAAAGTTAACAAGCGAAATCATAGGGAACTGAAAAGCAGTGATTCCTATGAACAACGAACGTCTCGAAGAAAGTCTTCTCGGCCTGATGATGATCAGAATTTCAGTGATTTAAAATACGATAACACGAACACCAACTAGGATTATCTTCAGAAAAGTCCTAGGAGCCCAGGCAGACATAGTAAGAAAAGAAAACCACCAGAAAACCACCAAGAATCCCAAAAGATCGATCGGAACCTTCCGTGTCGTATAATTTATGCTTCCAAAGTCGTGATCATATTTCAAAGGGCGAGAGAAGTCGATTTGACCCACACGGGGCTCAGCTAAACCAACCTTTTGTTTGCCCGTTTCATATTTGCCATATATTTGTTGAAAATCTATTTTTGCCTTACTCACATTCCTACTTCCTTCTAAGACGAGTTTCATGCATCAAATTTCCATTCAAGTTAAAAGTTTCACATTTACC

Coding sequence (CDS)

ATGAAGACAAGGTACCAGACATGTTCTCATGGAACAGCTTGTAATTTCATTCACTGTTTTCGAAATCCTGGTGGGGACTATGAATGGGCTGATAGTGACAAACCTCCCCCACGGTATTGGGTGAAAAAGATGGCTTCTCTGTTTGGTTATTTAGATGAATCCGAAAATGAAAAACATACTGAGCTTGAACACTGGGACAAGTTTGGAAAATCCAGCAGGTCAATGTCAACAGATGTCGACAGATATCATTCAAGAAGATCTAAATCTAGAAGTCTGGACCATGGCTCCAGAAGAAGTAAAAACAGTGAAAATGACTATAGAAGGCACTCTCGTAGAGAAAAAGTTCACGAGAAGCAGCAAAGTTCGGATAAGGAAGAATATGAGCAGGCAAACCTAAAATATTACCACCGGAGAAACAACAGATTTAATGATGCAGATTCTAATGAATCAGCGGATAAGTTTGACGAGAGAAGCAAAGATAGAGAACGTGGTAGGAGATCACGAGTTCGAAATGCAGATCATGATGACAGCAAGAACACATCAAATGAAACTGATGAAGGCTGGTCAAGTGGTGATGGGAACAAATATGGGCATCGACACCAAAGAAGGAAAAGCAATGGGCACGTTTCCGAGACGTTTAAAACCACAGGTGGTTCTCCAAGCCAGAGCGCAATCAGTGATCACGATACACGTGGAATTTCTTCTGACAGAAACAAGGAAAGGCGTGTTTCGTATGGTGGAAAACCCAAGAAACGCTGGGATGAGGTTACTAAAGATTCTAATGACCAGTTGAAACAGAAATCTAAGTTGGAGACTGATTATGTAAGCAAGAAGTTCAGCTTAAGAAAATCCAGTAGTCTCCTATCAGATGGGAGACAGGAGCAGTCTATTTCAGATCGATATCTTGAGAGGTCCGAACCAATGAATCTCGACAAAGAATACTGTAACAACGAGCACATTGACAAGGAAGGCCGATGGGATCCTGGAAGAAGTTATGATGAATTCGAAAAATGTAGCGAGAGTACAAGCGTTATGCACTCCGAGGCTGGAAGCCCTGTTCGCCAAGGTGAAAGATTTAAATCAGATGTTCTTGGTAGAGTAGACTACTATGGTAACAAAGTTAACAAGCGAAATCATAGGGAACTGAAAAGCAGTGATTCCTATGAACAACGAACGTCTCGAAGAAAGTCTTCTCGGCCTGATGATGATCAGAATTTCAGTGATTTAAAATACGATAACACGAACACCAACTAG

Protein sequence

MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHTELEHWDKFGKSSRSMSTDVDRYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQSSDKEEYEQANLKYYHRRNNRFNDADSNESADKFDERSKDRERGRRSRVRNADHDDSKNTSNETDEGWSSGDGNKYGHRHQRRKSNGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKERRVSYGGKPKKRWDEVTKDSNDQLKQKSKLETDYVSKKFSLRKSSSLLSDGRQEQSISDRYLERSEPMNLDKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSVMHSEAGSPVRQGERFKSDVLGRVDYYGNKVNKRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNTN

Homology

[Close]

BLAST of Carg25373 vs. NCBI nr
Match: KAG7015442.1 (Zinc finger CCCH domain-containing protein 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 813.9 bits (2101), Expect = 6.3e-232
Identity = 417/417 (100.00%), Postives = 417/417 (100.00%), Query Frame = 0


Query: 1   MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT 60
           MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT
Sbjct: 1   MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT 60

Query: 61  ELEHWDKFGKSSRSMSTDVDRYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQ 120
           ELEHWDKFGKSSRSMSTDVDRYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQ
Sbjct: 61  ELEHWDKFGKSSRSMSTDVDRYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQ 120

Query: 121 SSDKEEYEQANLKYYHRRNNRFNDADSNESADKFDERSKDRERGRRSRVRNADHDDSKNT 180
           SSDKEEYEQANLKYYHRRNNRFNDADSNESADKFDERSKDRERGRRSRVRNADHDDSKNT
Sbjct: 121 SSDKEEYEQANLKYYHRRNNRFNDADSNESADKFDERSKDRERGRRSRVRNADHDDSKNT 180

Query: 181 SNETDEGWSSGDGNKYGHRHQRRKSNGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKE 240
           SNETDEGWSSGDGNKYGHRHQRRKSNGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKE
Sbjct: 181 SNETDEGWSSGDGNKYGHRHQRRKSNGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKE 240

Query: 241 RRVSYGGKPKKRWDEVTKDSNDQLKQKSKLETDYVSKKFSLRKSSSLLSDGRQEQSISDR 300
           RRVSYGGKPKKRWDEVTKDSNDQLKQKSKLETDYVSKKFSLRKSSSLLSDGRQEQSISDR
Sbjct: 241 RRVSYGGKPKKRWDEVTKDSNDQLKQKSKLETDYVSKKFSLRKSSSLLSDGRQEQSISDR 300

Query: 301 YLERSEPMNLDKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSVMHSEAGSPVRQGERFK 360
           YLERSEPMNLDKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSVMHSEAGSPVRQGERFK
Sbjct: 301 YLERSEPMNLDKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSVMHSEAGSPVRQGERFK 360

Query: 361 SDVLGRVDYYGNKVNKRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNTN 418
           SDVLGRVDYYGNKVNKRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNTN
Sbjct: 361 SDVLGRVDYYGNKVNKRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNTN 417

[Close]

BLAST of Carg25373 vs. NCBI nr
Match: KAG6577355.1 (Zinc finger CCCH domain-containing protein 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 812.4 bits (2097), Expect = 1.8e-231
Identity = 416/417 (99.76%), Postives = 417/417 (100.00%), Query Frame = 0


Query: 1   MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT 60
           MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT
Sbjct: 368 MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT 427

Query: 61  ELEHWDKFGKSSRSMSTDVDRYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQ 120
           ELEHWDKFGKSSRSMSTDVDRYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQ
Sbjct: 428 ELEHWDKFGKSSRSMSTDVDRYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQ 487

Query: 121 SSDKEEYEQANLKYYHRRNNRFNDADSNESADKFDERSKDRERGRRSRVRNADHDDSKNT 180
           SSDKEEYEQANLKYYHRRNNRFNDADSNESADKFDERSKDRERGRRSRVRNADHDDSKNT
Sbjct: 488 SSDKEEYEQANLKYYHRRNNRFNDADSNESADKFDERSKDRERGRRSRVRNADHDDSKNT 547

Query: 181 SNETDEGWSSGDGNKYGHRHQRRKSNGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKE 240
           SNETDEGWSSGDGNKYGHRHQRRKSNGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKE
Sbjct: 548 SNETDEGWSSGDGNKYGHRHQRRKSNGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKE 607

Query: 241 RRVSYGGKPKKRWDEVTKDSNDQLKQKSKLETDYVSKKFSLRKSSSLLSDGRQEQSISDR 300
           RRVSYGGKPKKRWDEVTK+SNDQLKQKSKLETDYVSKKFSLRKSSSLLSDGRQEQSISDR
Sbjct: 608 RRVSYGGKPKKRWDEVTKESNDQLKQKSKLETDYVSKKFSLRKSSSLLSDGRQEQSISDR 667

Query: 301 YLERSEPMNLDKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSVMHSEAGSPVRQGERFK 360
           YLERSEPMNLDKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSVMHSEAGSPVRQGERFK
Sbjct: 668 YLERSEPMNLDKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSVMHSEAGSPVRQGERFK 727

Query: 361 SDVLGRVDYYGNKVNKRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNTN 418
           SDVLGRVDYYGNKVNKRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNTN
Sbjct: 728 SDVLGRVDYYGNKVNKRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNTN 784

[Close]

BLAST of Carg25373 vs. NCBI nr
Match: XP_022929398.1 (zinc finger CCCH domain-containing protein 5 [Cucurbita moschata])

HSP 1 Score: 794.3 bits (2050), Expect = 5.2e-226
Identity = 407/417 (97.60%), Postives = 412/417 (98.80%), Query Frame = 0


Query: 1   MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT 60
           MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT
Sbjct: 369 MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT 428

Query: 61  ELEHWDKFGKSSRSMSTDVDRYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQ 120
           ELEHWDKFGKSSRSMSTDVDRYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQ
Sbjct: 429 ELEHWDKFGKSSRSMSTDVDRYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQ 488

Query: 121 SSDKEEYEQANLKYYHRRNNRFNDADSNESADKFDERSKDRERGRRSRVRNADHDDSKNT 180
           SSDKEEYEQANLKYYHRRNNRFNDADS+ESADKFDERSKDRERGRRSRVRNADHDDSKNT
Sbjct: 489 SSDKEEYEQANLKYYHRRNNRFNDADSDESADKFDERSKDRERGRRSRVRNADHDDSKNT 548

Query: 181 SNETDEGWSSGDGNKYGHRHQRRKSNGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKE 240
           SNETDEGWSSGDGNKY HRHQRRKSNGHVSETFKTTGGSPSQSAISD DTRGISSDRNKE
Sbjct: 549 SNETDEGWSSGDGNKYRHRHQRRKSNGHVSETFKTTGGSPSQSAISDRDTRGISSDRNKE 608

Query: 241 RRVSYGGKPKKRWDEVTKDSNDQLKQKSKLETDYVSKKFSLRKSSSLLSDGRQEQSISDR 300
           RRVSYGGKPKKRWDEVTKDS+DQLKQKSKL+TDY  KKFSLRKS+ LLSDGRQEQSISDR
Sbjct: 609 RRVSYGGKPKKRWDEVTKDSDDQLKQKSKLKTDYECKKFSLRKSTGLLSDGRQEQSISDR 668

Query: 301 YLERSEPMNLDKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSVMHSEAGSPVRQGERFK 360
           Y+ERSEPMNLDKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSVMHSEAGSPVRQGERFK
Sbjct: 669 YVERSEPMNLDKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSVMHSEAGSPVRQGERFK 728

Query: 361 SDVLGRVDYYGNKVNKRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNTN 418
           SDVLGRVDYYGNKVNKRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNTN
Sbjct: 729 SDVLGRVDYYGNKVNKRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNTN 785

[Close]

BLAST of Carg25373 vs. NCBI nr
Match: XP_022984571.1 (zinc finger CCCH domain-containing protein 5 [Cucurbita maxima])

HSP 1 Score: 775.0 bits (2000), Expect = 3.2e-220
Identity = 399/417 (95.68%), Postives = 406/417 (97.36%), Query Frame = 0


Query: 1   MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT 60
           MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT
Sbjct: 368 MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT 427

Query: 61  ELEHWDKFGKSSRSMSTDVDRYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQ 120
           ELEHWDKFGKSSRSMSTDV+RYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQ
Sbjct: 428 ELEHWDKFGKSSRSMSTDVNRYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQ 487

Query: 121 SSDKEEYEQANLKYYHRRNNRFNDADSNESADKFDERSKDRERGRRSRVRNADHDDSKNT 180
           S DKEEYEQANLKYYHRRNNRFNDA+S+ESAD FDERSKDRERGRRSRVRNADHDDSKN 
Sbjct: 488 SLDKEEYEQANLKYYHRRNNRFNDANSDESADTFDERSKDRERGRRSRVRNADHDDSKNK 547

Query: 181 SNETDEGWSSGDGNKYGHRHQRRKSNGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKE 240
           SNETDEGWSSGDGNKYGHRHQRRK NGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKE
Sbjct: 548 SNETDEGWSSGDGNKYGHRHQRRKCNGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKE 607

Query: 241 RRVSYGGKPKKRWDEVTKDSNDQLKQKSKLETDYVSKKFSLRKSSSLLSDGRQEQSISDR 300
           RRVSYGGKPKKRWDEVTKDS+DQLKQKSKL+TDY SKKFSLRKSSSLLSDGRQEQSISDR
Sbjct: 608 RRVSYGGKPKKRWDEVTKDSDDQLKQKSKLKTDYESKKFSLRKSSSLLSDGRQEQSISDR 667

Query: 301 YLERSEPMNLDKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSVMHSEAGSPVRQGERFK 360
           Y+ERSEPMNL KEYCNNEHIDKEGRWDPGRSYDEFEKCSESTS M SEAGSPV QGERFK
Sbjct: 668 YVERSEPMNLGKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSTMRSEAGSPVCQGERFK 727

Query: 361 SDVLGRVDYYGNKVNKRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNTN 418
           SDVL RVDYYGNKV KRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNT+
Sbjct: 728 SDVLDRVDYYGNKVKKRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNTD 784

[Close]

BLAST of Carg25373 vs. NCBI nr
Match: XP_023552003.1 (zinc finger CCCH domain-containing protein 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 771.2 bits (1990), Expect = 4.7e-219
Identity = 398/417 (95.44%), Postives = 403/417 (96.64%), Query Frame = 0


Query: 1   MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT 60
           MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT
Sbjct: 369 MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT 428

Query: 61  ELEHWDKFGKSSRSMSTDVDRYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQ 120
           ELEHWDKFGKSSRSMSTDVDRY SRRSKSRSLDHGSRRSKNSENDY RHSRREKVHE QQ
Sbjct: 429 ELEHWDKFGKSSRSMSTDVDRYRSRRSKSRSLDHGSRRSKNSENDYTRHSRREKVHENQQ 488

Query: 121 SSDKEEYEQANLKYYHRRNNRFNDADSNESADKFDERSKDRERGRRSRVRNADHDDSKNT 180
           S DKEEYEQANLKYYHRRNNRFNDADS+ESADKFDERSKDRERGRRSRVRNADHDDSKNT
Sbjct: 489 SLDKEEYEQANLKYYHRRNNRFNDADSDESADKFDERSKDRERGRRSRVRNADHDDSKNT 548

Query: 181 SNETDEGWSSGDGNKYGHRHQRRKSNGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKE 240
           SNETDEGWSSGDGNKY HRHQRRKSNGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKE
Sbjct: 549 SNETDEGWSSGDGNKYVHRHQRRKSNGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKE 608

Query: 241 RRVSYGGKPKKRWDEVTKDSNDQLKQKSKLETDYVSKKFSLRKSSSLLSDGRQEQSISDR 300
           RRVSYGGK KKRWDEVTKDS+DQLKQKSKL+TDY  KKFSLRKSS L SDGRQEQSISDR
Sbjct: 609 RRVSYGGKHKKRWDEVTKDSDDQLKQKSKLKTDYECKKFSLRKSSGLPSDGRQEQSISDR 668

Query: 301 YLERSEPMNLDKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSVMHSEAGSPVRQGERFK 360
           Y+ERSEPMNLDKE+CNNEH DKEGRWDPGRSYDEFEK SESTS MHSEAGSPVRQGERFK
Sbjct: 669 YIERSEPMNLDKEFCNNEHTDKEGRWDPGRSYDEFEKFSESTSAMHSEAGSPVRQGERFK 728

Query: 361 SDVLGRVDYYGNKVNKRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNTN 418
           SDVLGRVDYYGNKV KRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNTN
Sbjct: 729 SDVLGRVDYYGNKVKKRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNTN 785

[Close]

BLAST of Carg25373 vs. ExPASy Swiss-Prot
Match: Q9SY74 (Zinc finger CCCH domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=At1g10320 PE=2 SV=2)

HSP 1 Score: 110.5 bits (275), Expect = 4.5e-23
Identity = 129/414 (31.16%), Postives = 189/414 (45.65%), Query Frame = 0


Query: 1   MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT 60
           MK+R +TCS G+ACNFIHCFRNPGGDYEWAD D+PPPR+W+ KM SLFGY D    EKH 
Sbjct: 384 MKSRLKTCSRGSACNFIHCFRNPGGDYEWADHDRPPPRFWIHKMTSLFGYSD----EKHM 443

Query: 61  ELEHWDKFGKSSRSMSTDVDRYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQ 120
           E E       S   +STD  R  SRRS+SR  DH +  S  S        R  K H   Q
Sbjct: 444 EHESSGSLNDSISDLSTDSHRQPSRRSRSRDHDHANVGSTPS-------YRSRKYHGDTQ 503

Query: 121 SSDKEEYEQANLKYYHRRNNRFNDADSNESADKFDERSKDRERGRRSRVRNADHDDSKNT 180
            S +E+  + + +  H       D D + S D   ER   +E   R   ++  H DS+  
Sbjct: 504 DSTREDKLRRHAENCH-------DGDDSPSRDGSLEREMYKE---RRYAKDTLHRDSR-- 563

Query: 181 SNETDEGWSSGDGNKYGHRHQRRKSNGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKE 240
                  WS    +  GHR  R++ +G  S+     G         D+  RG    R   
Sbjct: 564 -------WSE---HSPGHRVGRKRIHGRYSDDDSADG--------DDYGRRGTGHKR--- 623

Query: 241 RRVSYGGKPKKRWDEVTKDSNDQLKQKSKLETDYVSKKFSLRKSSSLLSDGRQE---QSI 300
                  KP++  D   ++  D  K +   +T   S+K S   SS+   +G +     ++
Sbjct: 624 -------KPRRGTDSGVQEQMDNEKDR---KTHRSSRKHSREGSSADKEEGHEHDRVHTV 683

Query: 301 SDR-YLERSEPMN-LDKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSVMHSEAG-SPVR 360
           SD+ + ERS+  +       ++E    E R    +  D+      S     S+      +
Sbjct: 684 SDKSHRERSKHRHERSSSRYSHEEDSTESRHHQHKESDKKRSVETSPVGYQSDKDRDRSK 740

Query: 361 QGERFKSDVLGRVDYYGNKVNKRNHRELKSSDSYEQRTSR---RKSSRPDDDQN 406
           Q +R+KSD     +   ++  KR   E    +++++R  R   R+ ++  DDQN
Sbjct: 744 QRQRYKSD---DPESDQSRKGKRQSEENSDRETHKERRHRHRKRRRTQNSDDQN 740

[Close]

BLAST of Carg25373 vs. ExPASy Swiss-Prot
Match: Q6YVX9 (Zinc finger CCCH domain-containing protein 16 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0557500 PE=2 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 2.8e-17
Identity = 101/357 (28.29%), Postives = 159/357 (44.54%), Query Frame = 0


Query: 1   MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT 60
           M++R++TCS G ACNFIHCFRNPGGDYEWAD D PPPRYW++KMA+LFG  D+S   K +
Sbjct: 307 MRSRFKTCSRGIACNFIHCFRNPGGDYEWADWDNPPPRYWIRKMAALFGPSDDSIYGKPS 366

Query: 61  ELEHWDKFGKSSR------------SMSTDVDRY---------HSRRSKSRSLDHGSRRS 120
           +  H ++   S R            S + D D +         HS+  +S   +H   R 
Sbjct: 367 DTPHLERSQSSDRRRPRSSDPRYTPSRTRDEDAHKQHSSRDYSHSKHERSSHTEHRRDRK 426

Query: 121 KNSENDYRRHSRREKVHEKQQSSDKEEYEQANLKYYHRRNNRFNDADSNESADKFDERSK 180
           ++S +D  RH  RE   +  + S   E E+ + KY     +R +  +  +      +  K
Sbjct: 427 ESSASDKHRH--REIKDKTSKYSSNMESERESHKYMREEKHRIDHGNGGKG-----DHGK 486

Query: 181 DRERGRRS-RVRNADHDDSKNTSNETDEGWS-SGDGNKYGHRHQRRKSNGHVSETFKTTG 240
            R R  RS R  + +   S  +S+  D+  + S  G+K   RH ++              
Sbjct: 487 VRSRKNRSERQESLEPGSSGRSSDFIDQDTTESPSGSKSTGRHHKK-------------- 546

Query: 241 GSPSQSAISDHDTRGISSDRNKE----------RRVSYGGKPKKRWDEVTKDSNDQLK-- 300
               + ++ +H TR  S  R+ E          +R  +      RW     D +  L+  
Sbjct: 547 --TRRQSLEEHSTRRSSRHRDMEDDGRGQSVAVKRKDHHDTSDDRWVATNSDVDSDLETQ 606

Query: 301 -QKSKLETDYVSKKFSLR--------KSSSLLSDGRQEQSISDRYLERSEPMNLDKE 314
            Q+S  E   +  K+  R        +S S  +  R+E+       ERS+ + +  +
Sbjct: 607 YQRSSSEGSKLGMKYHARSDSETGYGRSRSGTTKSRRERKRQSGNGERSDTLEVTSD 640

[Close]

BLAST of Carg25373 vs. ExPASy TrEMBL
Match: A0A6J1ERZ7 (zinc finger CCCH domain-containing protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111435982 PE=4 SV=1)

HSP 1 Score: 794.3 bits (2050), Expect = 2.5e-226
Identity = 407/417 (97.60%), Postives = 412/417 (98.80%), Query Frame = 0


Query: 1   MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT 60
           MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT
Sbjct: 369 MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT 428

Query: 61  ELEHWDKFGKSSRSMSTDVDRYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQ 120
           ELEHWDKFGKSSRSMSTDVDRYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQ
Sbjct: 429 ELEHWDKFGKSSRSMSTDVDRYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQ 488

Query: 121 SSDKEEYEQANLKYYHRRNNRFNDADSNESADKFDERSKDRERGRRSRVRNADHDDSKNT 180
           SSDKEEYEQANLKYYHRRNNRFNDADS+ESADKFDERSKDRERGRRSRVRNADHDDSKNT
Sbjct: 489 SSDKEEYEQANLKYYHRRNNRFNDADSDESADKFDERSKDRERGRRSRVRNADHDDSKNT 548

Query: 181 SNETDEGWSSGDGNKYGHRHQRRKSNGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKE 240
           SNETDEGWSSGDGNKY HRHQRRKSNGHVSETFKTTGGSPSQSAISD DTRGISSDRNKE
Sbjct: 549 SNETDEGWSSGDGNKYRHRHQRRKSNGHVSETFKTTGGSPSQSAISDRDTRGISSDRNKE 608

Query: 241 RRVSYGGKPKKRWDEVTKDSNDQLKQKSKLETDYVSKKFSLRKSSSLLSDGRQEQSISDR 300
           RRVSYGGKPKKRWDEVTKDS+DQLKQKSKL+TDY  KKFSLRKS+ LLSDGRQEQSISDR
Sbjct: 609 RRVSYGGKPKKRWDEVTKDSDDQLKQKSKLKTDYECKKFSLRKSTGLLSDGRQEQSISDR 668

Query: 301 YLERSEPMNLDKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSVMHSEAGSPVRQGERFK 360
           Y+ERSEPMNLDKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSVMHSEAGSPVRQGERFK
Sbjct: 669 YVERSEPMNLDKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSVMHSEAGSPVRQGERFK 728

Query: 361 SDVLGRVDYYGNKVNKRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNTN 418
           SDVLGRVDYYGNKVNKRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNTN
Sbjct: 729 SDVLGRVDYYGNKVNKRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNTN 785

[Close]

BLAST of Carg25373 vs. ExPASy TrEMBL
Match: A0A6J1J5M6 (zinc finger CCCH domain-containing protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111482827 PE=4 SV=1)

HSP 1 Score: 775.0 bits (2000), Expect = 1.6e-220
Identity = 399/417 (95.68%), Postives = 406/417 (97.36%), Query Frame = 0


Query: 1   MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT 60
           MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT
Sbjct: 368 MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT 427

Query: 61  ELEHWDKFGKSSRSMSTDVDRYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQ 120
           ELEHWDKFGKSSRSMSTDV+RYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQ
Sbjct: 428 ELEHWDKFGKSSRSMSTDVNRYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQ 487

Query: 121 SSDKEEYEQANLKYYHRRNNRFNDADSNESADKFDERSKDRERGRRSRVRNADHDDSKNT 180
           S DKEEYEQANLKYYHRRNNRFNDA+S+ESAD FDERSKDRERGRRSRVRNADHDDSKN 
Sbjct: 488 SLDKEEYEQANLKYYHRRNNRFNDANSDESADTFDERSKDRERGRRSRVRNADHDDSKNK 547

Query: 181 SNETDEGWSSGDGNKYGHRHQRRKSNGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKE 240
           SNETDEGWSSGDGNKYGHRHQRRK NGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKE
Sbjct: 548 SNETDEGWSSGDGNKYGHRHQRRKCNGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKE 607

Query: 241 RRVSYGGKPKKRWDEVTKDSNDQLKQKSKLETDYVSKKFSLRKSSSLLSDGRQEQSISDR 300
           RRVSYGGKPKKRWDEVTKDS+DQLKQKSKL+TDY SKKFSLRKSSSLLSDGRQEQSISDR
Sbjct: 608 RRVSYGGKPKKRWDEVTKDSDDQLKQKSKLKTDYESKKFSLRKSSSLLSDGRQEQSISDR 667

Query: 301 YLERSEPMNLDKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSVMHSEAGSPVRQGERFK 360
           Y+ERSEPMNL KEYCNNEHIDKEGRWDPGRSYDEFEKCSESTS M SEAGSPV QGERFK
Sbjct: 668 YVERSEPMNLGKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSTMRSEAGSPVCQGERFK 727

Query: 361 SDVLGRVDYYGNKVNKRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNTN 418
           SDVL RVDYYGNKV KRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNT+
Sbjct: 728 SDVLDRVDYYGNKVKKRNHRELKSSDSYEQRTSRRKSSRPDDDQNFSDLKYDNTNTD 784

[Close]

BLAST of Carg25373 vs. ExPASy TrEMBL
Match: A0A1S3BUH0 (zinc finger CCCH domain-containing protein 5 OS=Cucumis melo OX=3656 GN=LOC103493302 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 2.5e-141
Identity = 297/480 (61.88%), Postives = 343/480 (71.46%), Query Frame = 0


Query: 1   MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT 60
           MKTRY+TCSHGTACNFIHCFRNPGGDYEWADSDK PPRYW+KKM SLFGYLDE ENEKH+
Sbjct: 367 MKTRYKTCSHGTACNFIHCFRNPGGDYEWADSDKSPPRYWLKKMTSLFGYLDEYENEKHS 426

Query: 61  ELEHWDKFGKSSRSMSTDVDRYHSRRSKSRSLDHGSRRSKNSENDYR--RHSRREKVHEK 120
           ELE+WDKFGKSS+S+++DVD Y SRRSKSRSLDHGSRR  N+ENDYR  RHSRREKV+EK
Sbjct: 427 ELEYWDKFGKSSKSVTSDVDSYRSRRSKSRSLDHGSRRIDNNENDYRLIRHSRREKVNEK 486

Query: 121 QQSSDKEEYEQANLKYYHRRNNRFNDADSNESADK------------------------- 180
           QQS DKE+YE+   KY  +R NR ND DS+ES DK                         
Sbjct: 487 QQSLDKEKYEK---KYDRQRKNRSNDTDSDESVDKFGERSKNRNWRKYRFNDIDSDELVD 546

Query: 181 -FDERSKDRERGRRSR------------VRNADHDDSKNTSNETDEGWSSGDGNKYGHRH 240
            F+ERSKDR+R RRSR            VRN+D DD+KN SNETDE WSSGDG+K GH+H
Sbjct: 547 EFEERSKDRDRSRRSRRPRKQDSNWKTGVRNSDRDDNKNISNETDEDWSSGDGDKDGHQH 606

Query: 241 QRRKSNGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKERRVSYGGKPKKRWDEVTKDS 300
           +RRKSNG  SET KTT   PS+S I D DT G+S++RNKER ++YGGK KK WDEVTK S
Sbjct: 607 KRRKSNGRASETSKTTDVYPSKSVIKDRDTHGVSTERNKERHLTYGGKRKKHWDEVTKGS 666

Query: 301 NDQLKQKSKLETDYVSKKFSLRKSSS------------------------LLSDGRQEQS 360
           +D L++KSKL+TDY SKK S  KSSS                        ++ D R E S
Sbjct: 667 DDHLEKKSKLKTDYESKKSSAGKSSSHYFESSSMDVNTEDGYSIDSLYNDVVLDERWEPS 726

Query: 361 ISDRYLERSEPMNLDKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSVMHSEAGSPVRQG 417
            SDRY+ER +P++ DKEYCNNEHID EGRWDP RSYDEFEKC E+ S M  E+GSPV Q 
Sbjct: 727 FSDRYIERFKPLDPDKEYCNNEHIDNEGRWDPDRSYDEFEKCRETVSAMCCESGSPVCQI 786

[Close]

BLAST of Carg25373 vs. ExPASy TrEMBL
Match: A0A5D3BNF0 (Zinc finger CCCH domain-containing protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00530 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 6.1e-140
Identity = 295/480 (61.46%), Postives = 341/480 (71.04%), Query Frame = 0


Query: 1   MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT 60
           MKTRY+TCSHGTACNFIHCFRNPGGDYEWADSDK PPRYW+KKM SLFGYLDE ENEKH+
Sbjct: 372 MKTRYKTCSHGTACNFIHCFRNPGGDYEWADSDKSPPRYWLKKMTSLFGYLDEYENEKHS 431

Query: 61  ELEHWDKFGKSSRSMSTDVDRYHSRRSKSRSLDHGSRRSKNSENDYR--RHSRREKVHEK 120
           ELE+WDKFGKSS+S+++DVD Y SRRSKSRSLDHGSRR  N+ENDYR  RHSRREKV+EK
Sbjct: 432 ELEYWDKFGKSSKSVTSDVDSYRSRRSKSRSLDHGSRRIDNNENDYRLIRHSRREKVNEK 491

Query: 121 QQSSDKEEYEQANLKYYHRRNNRFNDADSNESADK------------------------- 180
           QQS DKE+YE+   KY  +R NR ND DS+ES DK                         
Sbjct: 492 QQSLDKEKYEK---KYDQQRKNRSNDTDSDESVDKFGERSKNRNWRKYRFNDIDSDELVD 551

Query: 181 -FDERSKDRERGRRSR------------VRNADHDDSKNTSNETDEGWSSGDGNKYGHRH 240
            F+ERSKDR+R RRSR            VRN+D DD+KN SNETDE WSSGDG+K GH+H
Sbjct: 552 EFEERSKDRDRSRRSRRPRKQDSNWKTGVRNSDRDDNKNISNETDEDWSSGDGDKDGHQH 611

Query: 241 QRRKSNGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKERRVSYGGKPKKRWDEVTKDS 300
           +RRKSNG  SET KTT   PS+S I D DT G+S++RNKER ++YGGK KK WDEVTK S
Sbjct: 612 KRRKSNGRASETSKTTDVYPSKSVIKDRDTHGVSTERNKERHLTYGGKRKKHWDEVTKGS 671

Query: 301 NDQLKQKSKLETDYVSKKFSLRKSSS------------------------LLSDGRQEQS 360
           +  L++KSKL+TDY SKK S  KSSS                        ++ D R E S
Sbjct: 672 DGHLEKKSKLKTDYESKKSSAGKSSSHYFESSSMDVNTEDGYSIDSLYNDVILDERWEPS 731

Query: 361 ISDRYLERSEPMNLDKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSVMHSEAGSPVRQG 417
            SDRY+ER +P++ DKEYCN EHID EGRWDP RSYDEFEKC E+ S M  E+GSPV Q 
Sbjct: 732 FSDRYIERFKPLDPDKEYCNKEHIDNEGRWDPDRSYDEFEKCRETASAMCCESGSPVCQI 791

[Close]

BLAST of Carg25373 vs. ExPASy TrEMBL
Match: A0A5A7V495 (Zinc finger CCCH domain-containing protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004030 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 6.1e-140
Identity = 295/480 (61.46%), Postives = 341/480 (71.04%), Query Frame = 0


Query: 1   MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT 60
           MKTRY+TCSHGTACNFIHCFRNPGGDYEWADSDK PPRYW+KKM SLFGYLDE ENEKH+
Sbjct: 360 MKTRYKTCSHGTACNFIHCFRNPGGDYEWADSDKSPPRYWLKKMTSLFGYLDEYENEKHS 419

Query: 61  ELEHWDKFGKSSRSMSTDVDRYHSRRSKSRSLDHGSRRSKNSENDYR--RHSRREKVHEK 120
           ELE+WDKFGKSS+S+++DVD Y SRRSKSRSLDHGSRR  N+ENDYR  RHSRREKV+EK
Sbjct: 420 ELEYWDKFGKSSKSVTSDVDSYRSRRSKSRSLDHGSRRIDNNENDYRLIRHSRREKVNEK 479

Query: 121 QQSSDKEEYEQANLKYYHRRNNRFNDADSNESADK------------------------- 180
           QQS DKE+YE+   KY  +R NR ND DS+ES DK                         
Sbjct: 480 QQSLDKEKYEK---KYDQQRKNRSNDTDSDESVDKFGERSKNRNWRKYRFNDIDSDELVD 539

Query: 181 -FDERSKDRERGRRSR------------VRNADHDDSKNTSNETDEGWSSGDGNKYGHRH 240
            F+ERSKDR+R RRSR            VRN+D DD+KN SNETDE WSSGDG+K GH+H
Sbjct: 540 EFEERSKDRDRSRRSRRPRKQDSNWKTGVRNSDRDDNKNISNETDEDWSSGDGDKDGHQH 599

Query: 241 QRRKSNGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKERRVSYGGKPKKRWDEVTKDS 300
           +RRKSNG  SET KTT   PS+S I D DT G+S++RNKER ++YGGK KK WDEVTK S
Sbjct: 600 KRRKSNGRASETSKTTDVYPSKSVIKDRDTHGVSTERNKERHLTYGGKRKKHWDEVTKGS 659

Query: 301 NDQLKQKSKLETDYVSKKFSLRKSSS------------------------LLSDGRQEQS 360
           +  L++KSKL+TDY SKK S  KSSS                        ++ D R E S
Sbjct: 660 DGHLEKKSKLKTDYESKKSSAGKSSSHYFESSSMDVNTEDGYSIDSLYNDVILDERWEPS 719

Query: 361 ISDRYLERSEPMNLDKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSVMHSEAGSPVRQG 417
            SDRY+ER +P++ DKEYCN EHID EGRWDP RSYDEFEKC E+ S M  E+GSPV Q 
Sbjct: 720 FSDRYIERFKPLDPDKEYCNKEHIDNEGRWDPDRSYDEFEKCRETASAMCCESGSPVCQI 779

[Close]

BLAST of Carg25373 vs. TAIR 10
Match: AT1G10320.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 110.5 bits (275), Expect = 3.2e-24
Identity = 129/414 (31.16%), Postives = 189/414 (45.65%), Query Frame = 0


Query: 1   MKTRYQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYLDESENEKHT 60
           MK+R +TCS G+ACNFIHCFRNPGGDYEWAD D+PPPR+W+ KM SLFGY D    EKH 
Sbjct: 384 MKSRLKTCSRGSACNFIHCFRNPGGDYEWADHDRPPPRFWIHKMTSLFGYSD----EKHM 443

Query: 61  ELEHWDKFGKSSRSMSTDVDRYHSRRSKSRSLDHGSRRSKNSENDYRRHSRREKVHEKQQ 120
           E E       S   +STD  R  SRRS+SR  DH +  S  S        R  K H   Q
Sbjct: 444 EHESSGSLNDSISDLSTDSHRQPSRRSRSRDHDHANVGSTPS-------YRSRKYHGDTQ 503

Query: 121 SSDKEEYEQANLKYYHRRNNRFNDADSNESADKFDERSKDRERGRRSRVRNADHDDSKNT 180
            S +E+  + + +  H       D D + S D   ER   +E   R   ++  H DS+  
Sbjct: 504 DSTREDKLRRHAENCH-------DGDDSPSRDGSLEREMYKE---RRYAKDTLHRDSR-- 563

Query: 181 SNETDEGWSSGDGNKYGHRHQRRKSNGHVSETFKTTGGSPSQSAISDHDTRGISSDRNKE 240
                  WS    +  GHR  R++ +G  S+     G         D+  RG    R   
Sbjct: 564 -------WSE---HSPGHRVGRKRIHGRYSDDDSADG--------DDYGRRGTGHKR--- 623

Query: 241 RRVSYGGKPKKRWDEVTKDSNDQLKQKSKLETDYVSKKFSLRKSSSLLSDGRQE---QSI 300
                  KP++  D   ++  D  K +   +T   S+K S   SS+   +G +     ++
Sbjct: 624 -------KPRRGTDSGVQEQMDNEKDR---KTHRSSRKHSREGSSADKEEGHEHDRVHTV 683

Query: 301 SDR-YLERSEPMN-LDKEYCNNEHIDKEGRWDPGRSYDEFEKCSESTSVMHSEAG-SPVR 360
           SD+ + ERS+  +       ++E    E R    +  D+      S     S+      +
Sbjct: 684 SDKSHRERSKHRHERSSSRYSHEEDSTESRHHQHKESDKKRSVETSPVGYQSDKDRDRSK 740

Query: 361 QGERFKSDVLGRVDYYGNKVNKRNHRELKSSDSYEQRTSR---RKSSRPDDDQN 406
           Q +R+KSD     +   ++  KR   E    +++++R  R   R+ ++  DDQN
Sbjct: 744 QRQRYKSD---DPESDQSRKGKRQSEENSDRETHKERRHRHRKRRRTQNSDDQN 740

The following BLAST results are available for this feature:

BLAST of Carg25373 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015442.1	6.3e-232	100.00	Zinc finger CCCH domain-containing protein 5 [Cucurbita argyrosperma subsp. argy...	[more]
KAG6577355.1	1.8e-231	99.76	Zinc finger CCCH domain-containing protein 5, partial [Cucurbita argyrosperma su...	[more]
XP_022929398.1	5.2e-226	97.60	zinc finger CCCH domain-containing protein 5 [Cucurbita moschata]	[more]
XP_022984571.1	3.2e-220	95.68	zinc finger CCCH domain-containing protein 5 [Cucurbita maxima]	[more]
XP_023552003.1	4.7e-219	95.44	zinc finger CCCH domain-containing protein 5 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg25373 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SY74	4.5e-23	31.16	Zinc finger CCCH domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q6YVX9	2.8e-17	28.29	Zinc finger CCCH domain-containing protein 16 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of Carg25373 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERZ7	2.5e-226	97.60	zinc finger CCCH domain-containing protein 5 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1J5M6	1.6e-220	95.68	zinc finger CCCH domain-containing protein 5 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A1S3BUH0	2.5e-141	61.88	zinc finger CCCH domain-containing protein 5 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A5D3BNF0	6.1e-140	61.46	Zinc finger CCCH domain-containing protein 5 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A5A7V495	6.1e-140	61.46	Zinc finger CCCH domain-containing protein 5 OS=Cucumis melo var. makuwa OX=1194...	[more]

BLAST of Carg25373 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10320.1	3.2e-24	31.16	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 370..417
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 372..408
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..295
None	No IPR available	PANTHER	PTHR12620:SF4	ZINC FINGER CCCH-TYPE, RNA BINDING MOTIF AND SERINE/ARGININE RICH 2	coord: 1..393
IPR009145	U2 auxiliary factor small subunit	PANTHER	PTHR12620	U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT	coord: 1..393

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25373-RA	Carg25373-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0089701	U2AF complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding