Homology
BLAST of Carg25361 vs. NCBI nr
Match:
KAG6596928.1 (Serine/arginine-rich splicing factor RS40, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 715.3 bits (1845), Expect = 2.6e-202
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 0
Query: 1 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
Sbjct: 13 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 72
Query: 61 GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF
Sbjct: 73 GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 132
Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 180
DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS
Sbjct: 133 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 192
Query: 181 PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM 240
PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM
Sbjct: 193 PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM 252
Query: 241 ERGSPDYGRRRSPNPSPYSRRERERSTDHVRAPRHSSPHQREGANEDPVPNRICSPYERE 300
ERGSPDYGRRRSPNPSPYSRRERERSTDHVRAPRHSSPHQREGANEDPVPNRICSPYERE
Sbjct: 253 ERGSPDYGRRRSPNPSPYSRRERERSTDHVRAPRHSSPHQREGANEDPVPNRICSPYERE 312
Query: 301 RESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPRA 360
RESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPRA
Sbjct: 313 RESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPRA 372
Query: 361 EE 363
EE
Sbjct: 373 EE 374
BLAST of Carg25361 vs. NCBI nr
Match:
KAG7028409.1 (Serine/arginine-rich splicing factor RS40 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 715.3 bits (1845), Expect = 2.6e-202
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 0
Query: 1 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
Sbjct: 1 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
Query: 61 GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF
Sbjct: 61 GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 180
DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS
Sbjct: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 180
Query: 181 PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM 240
PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM
Sbjct: 181 PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM 240
Query: 241 ERGSPDYGRRRSPNPSPYSRRERERSTDHVRAPRHSSPHQREGANEDPVPNRICSPYERE 300
ERGSPDYGRRRSPNPSPYSRRERERSTDHVRAPRHSSPHQREGANEDPVPNRICSPYERE
Sbjct: 241 ERGSPDYGRRRSPNPSPYSRRERERSTDHVRAPRHSSPHQREGANEDPVPNRICSPYERE 300
Query: 301 RESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPRA 360
RESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPRA
Sbjct: 301 RESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPRA 360
Query: 361 EE 363
EE
Sbjct: 361 EE 362
BLAST of Carg25361 vs. NCBI nr
Match:
XP_022940255.1 (serine/arginine-rich splicing factor RS40-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 712.2 bits (1837), Expect = 2.2e-201
Identity = 361/362 (99.72%), Postives = 361/362 (99.72%), Query Frame = 0
Query: 1 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
Sbjct: 16 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 75
Query: 61 GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF
Sbjct: 76 GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 135
Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 180
DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS
Sbjct: 136 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 195
Query: 181 PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM 240
PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM
Sbjct: 196 PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM 255
Query: 241 ERGSPDYGRRRSPNPSPYSRRERERSTDHVRAPRHSSPHQREGANEDPVPNRICSPYERE 300
ERGSPDYGRRRSPNPSPYSRRERERSTDHVRA RHSSPHQREGANEDPVPNRICSPYERE
Sbjct: 256 ERGSPDYGRRRSPNPSPYSRRERERSTDHVRAARHSSPHQREGANEDPVPNRICSPYERE 315
Query: 301 RESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPRA 360
RESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPRA
Sbjct: 316 RESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPRA 375
Query: 361 EE 363
EE
Sbjct: 376 EE 377
BLAST of Carg25361 vs. NCBI nr
Match:
XP_022940263.1 (serine/arginine-rich splicing factor RS40-like isoform X2 [Cucurbita moschata])
HSP 1 Score: 712.2 bits (1837), Expect = 2.2e-201
Identity = 361/362 (99.72%), Postives = 361/362 (99.72%), Query Frame = 0
Query: 1 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
Sbjct: 1 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
Query: 61 GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF
Sbjct: 61 GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 180
DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS
Sbjct: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 180
Query: 181 PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM 240
PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM
Sbjct: 181 PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM 240
Query: 241 ERGSPDYGRRRSPNPSPYSRRERERSTDHVRAPRHSSPHQREGANEDPVPNRICSPYERE 300
ERGSPDYGRRRSPNPSPYSRRERERSTDHVRA RHSSPHQREGANEDPVPNRICSPYERE
Sbjct: 241 ERGSPDYGRRRSPNPSPYSRRERERSTDHVRAARHSSPHQREGANEDPVPNRICSPYERE 300
Query: 301 RESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPRA 360
RESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPRA
Sbjct: 301 RESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPRA 360
Query: 361 EE 363
EE
Sbjct: 361 EE 362
BLAST of Carg25361 vs. NCBI nr
Match:
XP_023520908.1 (serine/arginine-rich splicing factor RS40-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 707.6 bits (1825), Expect = 5.5e-200
Identity = 358/362 (98.90%), Postives = 359/362 (99.17%), Query Frame = 0
Query: 1 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
Sbjct: 1 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
Query: 61 GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF
Sbjct: 61 GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 180
DPYGKILSVRIRRNFAFVQYELQ+DATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS
Sbjct: 121 DPYGKILSVRIRRNFAFVQYELQDDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 180
Query: 181 PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM 240
PDRKCDRSPDRKRRSPSP RRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM
Sbjct: 181 PDRKCDRSPDRKRRSPSPIRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM 240
Query: 241 ERGSPDYGRRRSPNPSPYSRRERERSTDHVRAPRHSSPHQREGANEDPVPNRICSPYERE 300
ERGSPDYGRRRSPNPSPYSRRE ERSTDHVRAPRHSSPHQREGANEDPVPNRICSPYERE
Sbjct: 241 ERGSPDYGRRRSPNPSPYSRREPERSTDHVRAPRHSSPHQREGANEDPVPNRICSPYERE 300
Query: 301 RESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPRA 360
RESPTGERRSSYSPRDRERSNPDNGHDQRLNT GEPGDSPSFGGTESPKHRGYSSRSPRA
Sbjct: 301 RESPTGERRSSYSPRDRERSNPDNGHDQRLNTAGEPGDSPSFGGTESPKHRGYSSRSPRA 360
Query: 361 EE 363
EE
Sbjct: 361 EE 362
BLAST of Carg25361 vs. ExPASy Swiss-Prot
Match:
P92965 (Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS40 PE=1 SV=2)
HSP 1 Score: 391.3 bits (1004), Expect = 1.1e-107
Identity = 218/363 (60.06%), Postives = 269/363 (74.10%), Query Frame = 0
Query: 1 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR EF
Sbjct: 1 MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60
Query: 61 GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
GRKGRRLRVEWTK ERG + GGGSRRSS++ RPSKTLFVINFD +TRTRDLE+HF
Sbjct: 61 GRKGRRLRVEWTKSERGGDK--RSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHF 120
Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 180
+PYGKI++VRIRRNFAF+QYE QEDATRAL+ +N SKL+D+VISVEYAV+DDD + +G+S
Sbjct: 121 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHS 180
Query: 181 PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM 240
P+R+ DRSP+R+RRSPSP++RERGSPDYG + Y+K+R SPDYG RRSPSPY++
Sbjct: 181 PERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKS- 240
Query: 241 ERGSPDYGRRRSPNPSPYSRRERERSTDHVRAPRHSSPHQREGANEDPVPNRICSPYERE 300
RGSP+YGR R N SP R T + R+P + E PN SP+++E
Sbjct: 241 RRGSPEYGRDRRGNDSPRRRERVASPTKYSRSPNNK--------RERMSPNH--SPFKKE 300
Query: 301 R-ESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPR 360
+ GE S R+R RS+P+NG + ++G + G ESP + S RSP
Sbjct: 301 SPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRSPRSPP 350
Query: 361 AEE 363
A+E
Sbjct: 361 ADE 350
BLAST of Carg25361 vs. ExPASy Swiss-Prot
Match:
P92966 (Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS41 PE=1 SV=2)
HSP 1 Score: 377.1 bits (967), Expect = 2.2e-103
Identity = 227/372 (61.02%), Postives = 270/372 (72.58%), Query Frame = 0
Query: 1 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR E+
Sbjct: 1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60
Query: 61 GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
GR GRRLRVEWTK +RG G GGSRRSS+ RPSKTLFVINFD +TRTRDLERHF
Sbjct: 61 GRTGRRLRVEWTKNDRG---GAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHF 120
Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 180
+PYGKI++VRIRRNFAF+QYE QEDATRAL+ TN SKL+D+VISVEYAV+DDD + +GYS
Sbjct: 121 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYS 180
Query: 181 PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYG-SRRSPSPYQRD 240
P+R+ DRSPDR+RRSPSP+RRERGSPDYG G S +K++R SPDYG RRSPSPY+R
Sbjct: 181 PERRRDRSPDRRRRSPSPYRRERGSPDYG-RGASPVAHKRERTSPDYGRGRRSPSPYKR- 240
Query: 241 MERGSPDYGRRRSPNPSPYSRRERERSTDHVRAPRHSSPHQREGANEDPVP------NRI 300
R SPDY R RRER S ++ A R+ SP + G + P P +R
Sbjct: 241 -ARLSPDYKR-------DDRRRERVASPEN-GAVRNRSPRKGRGESRSPPPYEKRRESRS 300
Query: 301 CSPYERERES---PTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKH 360
PYE+ RES P E+R S R R +S+P+NG + + E + G +SP
Sbjct: 301 PPPYEKRRESRSPPPYEKRRERS-RSRSKSSPENGQVESPGQIMEVEAGRGYDGADSP-I 356
Query: 361 RGYSSRSPRAEE 363
R SRSP AEE
Sbjct: 361 RESPSRSPPAEE 356
BLAST of Carg25361 vs. ExPASy Swiss-Prot
Match:
P92964 (Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS31 PE=1 SV=2)
HSP 1 Score: 268.9 bits (686), Expect = 8.6e-71
Identity = 155/273 (56.78%), Postives = 187/273 (68.50%), Query Frame = 0
Query: 1 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
M+P+F GNFEY+ RQ DLERLF +YG+VDRVDMKSG+AF+Y EDERDAEDAIR LD F
Sbjct: 1 MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60
Query: 61 GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
G + RRL VEW K ERG R G ++ +N +P+KTLFVINFDP T+ D+E+HF
Sbjct: 61 GYEKRRLSVEWAKGERGRPR------GDAKAPSNLKPTKTLFVINFDPIRTKEHDIEKHF 120
Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 180
+PYGK+ +VRIRRNF+FVQ+E QEDAT+ALE T SK+LDRV+SVEYA++DDDE+
Sbjct: 121 EPYGKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDER----- 180
Query: 181 PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRS-------- 240
DR RSP RRS SP R R SPDYG SP + +R SPDYG RS
Sbjct: 181 DDRNGGRSP---RRSLSPVYRRRPSPDYGRR---PSPGQGRRPSPDYGRARSPEYDRYKG 240
Query: 241 PSPYQR----DMERGSPDYGRRRSPNPSPYSRR 262
P+ Y+R D R S DYGR+RSP Y R
Sbjct: 241 PAAYERRRSPDYGRRSSDYGRQRSPGYDRYRSR 256
BLAST of Carg25361 vs. ExPASy Swiss-Prot
Match:
Q9ZPX8 (Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS31A PE=1 SV=1)
HSP 1 Score: 247.7 bits (631), Expect = 2.1e-64
Identity = 145/275 (52.73%), Postives = 183/275 (66.55%), Query Frame = 0
Query: 1 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
M+ ++ GNF+YD R DLERLFS++G+V RVDMKSG+AF+Y EDERDAEDAIR D F
Sbjct: 1 MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTF 60
Query: 61 GRKGRRLRVEWTKQERGIR-RPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERH 120
G R+L VEW K +G R +P G ++ +N RP+KTLFVINFDP TR RD+ERH
Sbjct: 61 GYGRRKLSVEWAKDFQGERGKPRDG-----KAVSNQRPTKTLFVINFDPIRTRERDMERH 120
Query: 121 FDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGY 180
F+PYGK+L+VR+RRNFAFVQ+ QEDAT+AL+ T+ SKLLD+V+SVEYA+R+ E+ Y
Sbjct: 121 FEPYGKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAGEREDRY 180
Query: 181 SPDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRD 240
+ R+RRSPSP R R SPDY +R SP+Y + P+PY+R
Sbjct: 181 --------AGSRRRRSPSPVYRRRPSPDY-----------TRRRSPEYDRYKGPAPYER- 240
Query: 241 MERGSPDYGRRRSPNPSPYSR-RERERSTDHVRAP 274
R SPDYGRR S Y R R R D R+P
Sbjct: 241 --RKSPDYGRR----SSDYGRARARSPGYDRSRSP 244
BLAST of Carg25361 vs. ExPASy Swiss-Prot
Match:
O22315 (Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR34 PE=1 SV=1)
HSP 1 Score: 76.3 bits (186), Expect = 8.2e-13
Identity = 91/301 (30.23%), Postives = 132/301 (43.85%), Query Frame = 0
Query: 2 KPIFCGNFEYDARQPDLERLFSRYGKVDRVDMK-----SGFAFIYMEDERDAEDAIRALD 61
+ ++ GN D R+ ++E LFS+YG V ++D+K G+AF+ +D RDAEDAI D
Sbjct: 7 RTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRD 66
Query: 62 RREFGRKGRRLRVEW-------TKQERGIRRPGGGGGGSRR----SSTNTRPSKTLFVIN 121
+F G RLRVE + RG GG GGG R S +R S+ ++
Sbjct: 67 GYDF--DGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFRVLVT 126
Query: 122 FDPYHTRTRDLERHFDPYGKILSVRIRRN----FAFVQYELQEDATRALELTNMSKLLDR 181
P +DL+ H G + ++ R+ V Y ED AL+ + ++ +
Sbjct: 127 GLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNA 186
Query: 182 VISVEYAVRDDDEKRSGYSPDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSP-YKK 241
+ VR+ D ++ SP R S R R R R SRSP K
Sbjct: 187 FSNGYVRVREYDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSRS----RSRSRSPKAKS 246
Query: 242 QRASPDYGSRRSPSPYQRDMERGSPDYGRRRSPNPSPYSRRERERSTDHVRAPRHSSPHQ 282
R SP + RSP P + SP R RS +P P ++E +S +P S H
Sbjct: 247 SRRSPAKSTSRSPGPRSKS-RSPSPRRSRSRSRSPLPSVQKEGSKSPSK-PSPAKSPIHT 299
BLAST of Carg25361 vs. ExPASy TrEMBL
Match:
A0A6J1FNS8 (serine/arginine-rich splicing factor RS40-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445933 PE=4 SV=1)
HSP 1 Score: 712.2 bits (1837), Expect = 1.1e-201
Identity = 361/362 (99.72%), Postives = 361/362 (99.72%), Query Frame = 0
Query: 1 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
Sbjct: 1 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
Query: 61 GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF
Sbjct: 61 GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 180
DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS
Sbjct: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 180
Query: 181 PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM 240
PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM
Sbjct: 181 PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM 240
Query: 241 ERGSPDYGRRRSPNPSPYSRRERERSTDHVRAPRHSSPHQREGANEDPVPNRICSPYERE 300
ERGSPDYGRRRSPNPSPYSRRERERSTDHVRA RHSSPHQREGANEDPVPNRICSPYERE
Sbjct: 241 ERGSPDYGRRRSPNPSPYSRRERERSTDHVRAARHSSPHQREGANEDPVPNRICSPYERE 300
Query: 301 RESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPRA 360
RESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPRA
Sbjct: 301 RESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPRA 360
Query: 361 EE 363
EE
Sbjct: 361 EE 362
BLAST of Carg25361 vs. ExPASy TrEMBL
Match:
A0A6J1FQ19 (serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445933 PE=4 SV=1)
HSP 1 Score: 712.2 bits (1837), Expect = 1.1e-201
Identity = 361/362 (99.72%), Postives = 361/362 (99.72%), Query Frame = 0
Query: 1 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
Sbjct: 16 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 75
Query: 61 GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF
Sbjct: 76 GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 135
Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 180
DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS
Sbjct: 136 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 195
Query: 181 PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM 240
PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM
Sbjct: 196 PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM 255
Query: 241 ERGSPDYGRRRSPNPSPYSRRERERSTDHVRAPRHSSPHQREGANEDPVPNRICSPYERE 300
ERGSPDYGRRRSPNPSPYSRRERERSTDHVRA RHSSPHQREGANEDPVPNRICSPYERE
Sbjct: 256 ERGSPDYGRRRSPNPSPYSRRERERSTDHVRAARHSSPHQREGANEDPVPNRICSPYERE 315
Query: 301 RESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPRA 360
RESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPRA
Sbjct: 316 RESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPRA 375
Query: 361 EE 363
EE
Sbjct: 376 EE 377
BLAST of Carg25361 vs. ExPASy TrEMBL
Match:
A0A6J1FQ39 (serine/arginine-rich splicing factor RS40-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111445933 PE=4 SV=1)
HSP 1 Score: 638.6 bits (1646), Expect = 1.5e-179
Identity = 327/331 (98.79%), Postives = 328/331 (99.09%), Query Frame = 0
Query: 32 DMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRRS 91
D +GFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRRS
Sbjct: 13 DWFTGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRRS 72
Query: 92 STNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALE 151
STNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALE
Sbjct: 73 STNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALE 132
Query: 152 LTNMSKLLDRVISVEYAVRDDDEKRSGYSPDRKCDRSPDRKRRSPSPFRRERGSPDYGIN 211
LTNMSKLLDRVISVEYAVRDDDEKRSGYSPDRKCDRSPDRKRRSPSPFRRERGSPDYGIN
Sbjct: 133 LTNMSKLLDRVISVEYAVRDDDEKRSGYSPDRKCDRSPDRKRRSPSPFRRERGSPDYGIN 192
Query: 212 GISRSPYKKQRASPDYGSRRSPSPYQRDMERGSPDYGRRRSPNPSPYSRRERERSTDHVR 271
GISRSPYKKQRASPDYGSRRSPSPYQRDMERGSPDYGRRRSPNPSPYSRRERERSTDHVR
Sbjct: 193 GISRSPYKKQRASPDYGSRRSPSPYQRDMERGSPDYGRRRSPNPSPYSRRERERSTDHVR 252
Query: 272 APRHSSPHQREGANEDPVPNRICSPYERERESPTGERRSSYSPRDRERSNPDNGHDQRLN 331
A RHSSPHQREGANEDPVPNRICSPYERERESPTGERRSSYSPRDRERSNPDNGHDQRLN
Sbjct: 253 AARHSSPHQREGANEDPVPNRICSPYERERESPTGERRSSYSPRDRERSNPDNGHDQRLN 312
Query: 332 TVGEPGDSPSFGGTESPKHRGYSSRSPRAEE 363
TVGEPGDSPSFGGTESPKHRGYSSRSPRAEE
Sbjct: 313 TVGEPGDSPSFGGTESPKHRGYSSRSPRAEE 343
BLAST of Carg25361 vs. ExPASy TrEMBL
Match:
A0A6J1FI02 (serine/arginine-rich splicing factor RS40-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111445933 PE=4 SV=1)
HSP 1 Score: 624.8 bits (1610), Expect = 2.3e-175
Identity = 320/321 (99.69%), Postives = 320/321 (99.69%), Query Frame = 0
Query: 42 MEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTL 101
MEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTL
Sbjct: 1 MEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTL 60
Query: 102 FVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDR 161
FVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDR
Sbjct: 61 FVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDR 120
Query: 162 VISVEYAVRDDDEKRSGYSPDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQ 221
VISVEYAVRDDDEKRSGYSPDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQ
Sbjct: 121 VISVEYAVRDDDEKRSGYSPDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQ 180
Query: 222 RASPDYGSRRSPSPYQRDMERGSPDYGRRRSPNPSPYSRRERERSTDHVRAPRHSSPHQR 281
RASPDYGSRRSPSPYQRDMERGSPDYGRRRSPNPSPYSRRERERSTDHVRA RHSSPHQR
Sbjct: 181 RASPDYGSRRSPSPYQRDMERGSPDYGRRRSPNPSPYSRRERERSTDHVRAARHSSPHQR 240
Query: 282 EGANEDPVPNRICSPYERERESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPS 341
EGANEDPVPNRICSPYERERESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPS
Sbjct: 241 EGANEDPVPNRICSPYERERESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPS 300
Query: 342 FGGTESPKHRGYSSRSPRAEE 363
FGGTESPKHRGYSSRSPRAEE
Sbjct: 301 FGGTESPKHRGYSSRSPRAEE 321
BLAST of Carg25361 vs. ExPASy TrEMBL
Match:
A0A6J1F1N4 (serine/arginine-rich splicing factor RS40-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111438593 PE=4 SV=1)
HSP 1 Score: 604.4 bits (1557), Expect = 3.2e-169
Identity = 318/367 (86.65%), Postives = 335/367 (91.28%), Query Frame = 0
Query: 1 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDER+AEDAIRALDRREF
Sbjct: 1 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREF 60
Query: 61 GRKGRRLRVEWTKQERGIRRPGG--GGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLER 120
GRKGRRLRVEWTKQERGIRRPGG GGG SRRSSTNT+PSKTLFVINFDPYHTRTRDLER
Sbjct: 61 GRKGRRLRVEWTKQERGIRRPGGGRGGGDSRRSSTNTKPSKTLFVINFDPYHTRTRDLER 120
Query: 121 HFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSG 180
HFDPYGKIL+VRIRRNFAFVQYELQEDATRALE+TNMSKL+DRVISVEYAVRDDDEKR+G
Sbjct: 121 HFDPYGKILNVRIRRNFAFVQYELQEDATRALEITNMSKLMDRVISVEYAVRDDDEKRNG 180
Query: 181 YSPDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQR 240
YSPDR DRSPDRKRRSPSP+RRERGSPDYG NG+SRSPY+K RASPDYGSRRSPSPYQR
Sbjct: 181 YSPDRTRDRSPDRKRRSPSPYRRERGSPDYG-NGVSRSPYRKVRASPDYGSRRSPSPYQR 240
Query: 241 DMERGSPDYGRRRSPNPSPYSR-RERERSTDHVRAPRHS--SPHQREGANEDPVPNRICS 300
ERGSP+YGR RSPN SPY R RERERS+DH RAP HS PHQRE N D + I S
Sbjct: 241 VRERGSPEYGRGRSPNQSPYRRERERERSSDHARAPSHSPPPPHQRERPNGDRAHSGIHS 300
Query: 301 PYERERESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSS 360
PY RER SPT ERR+SYSPRDRERSNPDNGHDQR NT+ EPGDSPS+GGT+SPKHRGY S
Sbjct: 301 PYGRERGSPTDERRTSYSPRDRERSNPDNGHDQRPNTIAEPGDSPSYGGTQSPKHRGYKS 360
Query: 361 RSPRAEE 363
RSP+AEE
Sbjct: 361 RSPQAEE 366
BLAST of Carg25361 vs. TAIR 10
Match:
AT4G25500.1 (arginine/serine-rich splicing factor 35 )
HSP 1 Score: 391.3 bits (1004), Expect = 8.2e-109
Identity = 218/363 (60.06%), Postives = 269/363 (74.10%), Query Frame = 0
Query: 1 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR EF
Sbjct: 1 MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60
Query: 61 GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
GRKGRRLRVEWTK ERG + GGGSRRSS++ RPSKTLFVINFD +TRTRDLE+HF
Sbjct: 61 GRKGRRLRVEWTKSERGGDK--RSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHF 120
Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 180
+PYGKI++VRIRRNFAF+QYE QEDATRAL+ +N SKL+D+VISVEYAV+DDD + +G+S
Sbjct: 121 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHS 180
Query: 181 PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM 240
P+R+ DRSP+R+RRSPSP++RERGSPDYG + Y+K+R SPDYG RRSPSPY++
Sbjct: 181 PERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKS- 240
Query: 241 ERGSPDYGRRRSPNPSPYSRRERERSTDHVRAPRHSSPHQREGANEDPVPNRICSPYERE 300
RGSP+YGR R N SP R T + R+P + E PN SP+++E
Sbjct: 241 RRGSPEYGRDRRGNDSPRRRERVASPTKYSRSPNNK--------RERMSPNH--SPFKKE 300
Query: 301 R-ESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPR 360
+ GE S R+R RS+P+NG + ++G + G ESP + S RSP
Sbjct: 301 SPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRSPRSPP 350
Query: 361 AEE 363
A+E
Sbjct: 361 ADE 350
BLAST of Carg25361 vs. TAIR 10
Match:
AT4G25500.4 (arginine/serine-rich splicing factor 35 )
HSP 1 Score: 391.3 bits (1004), Expect = 8.2e-109
Identity = 218/363 (60.06%), Postives = 269/363 (74.10%), Query Frame = 0
Query: 1 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR EF
Sbjct: 1 MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60
Query: 61 GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
GRKGRRLRVEWTK ERG + GGGSRRSS++ RPSKTLFVINFD +TRTRDLE+HF
Sbjct: 61 GRKGRRLRVEWTKSERGGDK--RSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHF 120
Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 180
+PYGKI++VRIRRNFAF+QYE QEDATRAL+ +N SKL+D+VISVEYAV+DDD + +G+S
Sbjct: 121 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHS 180
Query: 181 PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM 240
P+R+ DRSP+R+RRSPSP++RERGSPDYG + Y+K+R SPDYG RRSPSPY++
Sbjct: 181 PERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKS- 240
Query: 241 ERGSPDYGRRRSPNPSPYSRRERERSTDHVRAPRHSSPHQREGANEDPVPNRICSPYERE 300
RGSP+YGR R N SP R T + R+P + E PN SP+++E
Sbjct: 241 RRGSPEYGRDRRGNDSPRRRERVASPTKYSRSPNNK--------RERMSPNH--SPFKKE 300
Query: 301 R-ESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPR 360
+ GE S R+R RS+P+NG + ++G + G ESP + S RSP
Sbjct: 301 SPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRSPRSPP 350
Query: 361 AEE 363
A+E
Sbjct: 361 ADE 350
BLAST of Carg25361 vs. TAIR 10
Match:
AT5G52040.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 380.2 bits (975), Expect = 1.9e-105
Identity = 226/372 (60.75%), Postives = 269/372 (72.31%), Query Frame = 0
Query: 1 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR E+
Sbjct: 1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60
Query: 61 GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
GR GRRLRVEWTK +RG G GGSRRSS+ RPSKTLFVINFD +TRTRDLERHF
Sbjct: 61 GRTGRRLRVEWTKNDRG---GAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHF 120
Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 180
+PYGKI++VRIRRNFAF+QYE QEDATRAL+ TN SKL+D+VISVEYAV+DDD + +GYS
Sbjct: 121 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYS 180
Query: 181 PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYG-SRRSPSPYQRD 240
P+R+ DRSPDR+RRSPSP+RRERGSPDYG G S +K++R SPDYG RRSPSPY+R
Sbjct: 181 PERRRDRSPDRRRRSPSPYRRERGSPDYG-RGASPVAHKRERTSPDYGRGRRSPSPYKR- 240
Query: 241 MERGSPDYGRRRSPNPSPYSRRERERSTDHVRAPRHSSPHQREGANEDPVP------NRI 300
R SPDY R RRER S ++ A R+ SP + G + P P +R
Sbjct: 241 -ARLSPDYKR-------DDRRRERVASPEN-GAVRNRSPRKGRGESRSPPPYEKRRESRS 300
Query: 301 CSPYERERES---PTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKH 360
PYE+ RES P E+R S R R +S+P+NG + + E + G +SP
Sbjct: 301 PPPYEKRRESRSPPPYEKRRERS-RSRSKSSPENGQVESPGQIMEVEAGRGYDGADSPIR 357
Query: 361 RGYSSRSPRAEE 363
SRSP AEE
Sbjct: 361 ESSPSRSPPAEE 357
BLAST of Carg25361 vs. TAIR 10
Match:
AT5G52040.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 377.1 bits (967), Expect = 1.6e-104
Identity = 227/372 (61.02%), Postives = 270/372 (72.58%), Query Frame = 0
Query: 1 MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR E+
Sbjct: 1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60
Query: 61 GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
GR GRRLRVEWTK +RG G GGSRRSS+ RPSKTLFVINFD +TRTRDLERHF
Sbjct: 61 GRTGRRLRVEWTKNDRG---GAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHF 120
Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 180
+PYGKI++VRIRRNFAF+QYE QEDATRAL+ TN SKL+D+VISVEYAV+DDD + +GYS
Sbjct: 121 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYS 180
Query: 181 PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYG-SRRSPSPYQRD 240
P+R+ DRSPDR+RRSPSP+RRERGSPDYG G S +K++R SPDYG RRSPSPY+R
Sbjct: 181 PERRRDRSPDRRRRSPSPYRRERGSPDYG-RGASPVAHKRERTSPDYGRGRRSPSPYKR- 240
Query: 241 MERGSPDYGRRRSPNPSPYSRRERERSTDHVRAPRHSSPHQREGANEDPVP------NRI 300
R SPDY R RRER S ++ A R+ SP + G + P P +R
Sbjct: 241 -ARLSPDYKR-------DDRRRERVASPEN-GAVRNRSPRKGRGESRSPPPYEKRRESRS 300
Query: 301 CSPYERERES---PTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKH 360
PYE+ RES P E+R S R R +S+P+NG + + E + G +SP
Sbjct: 301 PPPYEKRRESRSPPPYEKRRERS-RSRSKSSPENGQVESPGQIMEVEAGRGYDGADSP-I 356
Query: 361 RGYSSRSPRAEE 363
R SRSP AEE
Sbjct: 361 RESPSRSPPAEE 356
BLAST of Carg25361 vs. TAIR 10
Match:
AT4G25500.3 (arginine/serine-rich splicing factor 35 )
HSP 1 Score: 327.8 bits (839), Expect = 1.1e-89
Identity = 190/328 (57.93%), Postives = 236/328 (71.95%), Query Frame = 0
Query: 36 GFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNT 95
GFAF+YMEDERDAEDAIRALDR EFGRKGRRLRVEWTK ERG + GGGSRRSS++
Sbjct: 3 GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDK--RSGGGSRRSSSSM 62
Query: 96 RPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNM 155
RPSKTLFVINFD +TRTRDLE+HF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ +N
Sbjct: 63 RPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNN 122
Query: 156 SKLLDRVISVEYAVRDDDEKRSGYSPDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISR 215
SKL+D+VISVEYAV+DDD + +G+SP+R+ DRSP+R+RRSPSP++RERGSPDYG
Sbjct: 123 SKLMDKVISVEYAVKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPV 182
Query: 216 SPYKKQRASPDYGSRRSPSPYQRDMERGSPDYGRRRSPNPSPYSRRERERSTDHVRAPRH 275
+ Y+K+R SPDYG RRSPSPY++ RGSP+YGR R N SP R T + R+P +
Sbjct: 183 AAYRKERTSPDYGRRRSPSPYKKS-RRGSPEYGRDRRGNDSPRRRERVASPTKYSRSPNN 242
Query: 276 SSPHQREGANEDPVPNRICSPYERER-ESPTGERRSSYSPRDRERSNPDNGHDQRLNTVG 335
E PN SP+++E + GE S R+R RS+P+NG + ++G
Sbjct: 243 K--------RERMSPNH--SPFKKESPRNGVGEVESPIERRERSRSSPENGQVESPGSIG 302
Query: 336 EPGDSPSFGGTESPKHRGYSSRSPRAEE 363
+ G ESP + S RSP A+E
Sbjct: 303 RRDSDGGYDGAESPMQKSRSPRSPPADE 317
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6596928.1 | 2.6e-202 | 100.00 | Serine/arginine-rich splicing factor RS40, partial [Cucurbita argyrosperma subsp... | [more] |
KAG7028409.1 | 2.6e-202 | 100.00 | Serine/arginine-rich splicing factor RS40 [Cucurbita argyrosperma subsp. argyros... | [more] |
XP_022940255.1 | 2.2e-201 | 99.72 | serine/arginine-rich splicing factor RS40-like isoform X1 [Cucurbita moschata] | [more] |
XP_022940263.1 | 2.2e-201 | 99.72 | serine/arginine-rich splicing factor RS40-like isoform X2 [Cucurbita moschata] | [more] |
XP_023520908.1 | 5.5e-200 | 98.90 | serine/arginine-rich splicing factor RS40-like isoform X1 [Cucurbita pepo subsp.... | [more] |
Match Name | E-value | Identity | Description | |
P92965 | 1.1e-107 | 60.06 | Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS4... | [more] |
P92966 | 2.2e-103 | 61.02 | Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS4... | [more] |
P92964 | 8.6e-71 | 56.78 | Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS3... | [more] |
Q9ZPX8 | 2.1e-64 | 52.73 | Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS... | [more] |
O22315 | 8.2e-13 | 30.23 | Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR3... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FNS8 | 1.1e-201 | 99.72 | serine/arginine-rich splicing factor RS40-like isoform X2 OS=Cucurbita moschata ... | [more] |
A0A6J1FQ19 | 1.1e-201 | 99.72 | serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucurbita moschata ... | [more] |
A0A6J1FQ39 | 1.5e-179 | 98.79 | serine/arginine-rich splicing factor RS40-like isoform X4 OS=Cucurbita moschata ... | [more] |
A0A6J1FI02 | 2.3e-175 | 99.69 | serine/arginine-rich splicing factor RS40-like isoform X3 OS=Cucurbita moschata ... | [more] |
A0A6J1F1N4 | 3.2e-169 | 86.65 | serine/arginine-rich splicing factor RS40-like isoform X2 OS=Cucurbita moschata ... | [more] |