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Carg25354 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTTCTCTATCACTCTCACGACGAACATCTTTAATAAGTCAACCACAGTGACAGAGACAAAGATCAAGACAAAAACAACACTACCCTTAATTGAGAAGAAAGAAGAAGCTGCAACGACAATGGCAACGACAACGTTGTTACCATCGAGACCTCTGAGCCGATTCCTAGCAGAGAAGGAAAAAAACCCTAGATCGGCGAGCCATTGCAACAAGAACAAGAAGATGTGCGAGACAATGTATGGAAAAGGGTGGCAATGTTGCAACAACAAGTGCGTGGACTTGAGGAATGACAAGCACAATTGCGGCGGATGCAAGAAGAAATGCAAGTACACGGCGGAGTGTTGTGGAGGACAATGCGTTGATGTGGCCTATGACAAGCGCCATTGCGGCAGTTGCAATAACCGTTGCCAACGCGGTAAATTTTGTGTATACGGCATGTGTGAGTATGCATGATAATATTATTACTACAATTACAAACTCTATAATAATCCATTACTTCGATGGTTTATTACATCATCTTTGATTTTATGGCTATTAAAAAAAATTTGAAAAAGCTTCAAATACAATAAAAAAAAGAGCCACATTTTATGTGGTTCTGGTCAAAACAATCAATTACTACAGCTGAAATTTAAAAATATATTTAAAATAAGATTGTTCTTATAAAGAACTTGATTGAGAATTATATTTTGTGCCAATGCCTTTTTTCTTTTTGTTTGTAGGGAGGATTTATTTGTAA ATGGCTTTCTCTATCACTCTCACGACGAACATCTTTAATAAGTCAACCACAGTGACAGAGACAAAGATCAAGACAAAAACAACACTACCCTTAATTGAGAAGAAAGAAGAAGCTGCAACGACAATGGCAACGACAACGTTGTTACCATCGAGACCTCTGAGCCGATTCCTAGCAGAGAAGGAAAAAAACCCTAGATCGGCGAGCCATTGCAACAAGAACAAGAAGATGTGCGAGACAATGTATGGAAAAGGGTGGCAATGTTGCAACAACAAGTGCGTGGACTTGAGGAATGACAAGCACAATTGCGGCGGATGCAAGAAGAAATGCAAGTACACGGCGGAGTGTTGTGGAGGACAATGCGTTGATGTGGCCTATGACAAGCGCCATTGCGGCAGTTGCAATAACCGTTGCCAACGCGGGAGGATTTATTTGTAA ATGGCTTTCTCTATCACTCTCACGACGAACATCTTTAATAAGTCAACCACAGTGACAGAGACAAAGATCAAGACAAAAACAACACTACCCTTAATTGAGAAGAAAGAAGAAGCTGCAACGACAATGGCAACGACAACGTTGTTACCATCGAGACCTCTGAGCCGATTCCTAGCAGAGAAGGAAAAAAACCCTAGATCGGCGAGCCATTGCAACAAGAACAAGAAGATGTGCGAGACAATGTATGGAAAAGGGTGGCAATGTTGCAACAACAAGTGCGTGGACTTGAGGAATGACAAGCACAATTGCGGCGGATGCAAGAAGAAATGCAAGTACACGGCGGAGTGTTGTGGAGGACAATGCGTTGATGTGGCCTATGACAAGCGCCATTGCGGCAGTTGCAATAACCGTTGCCAACGCGGGAGGATTTATTTGTAA MAFSITLTTNIFNKSTTVTETKIKTKTTLPLIEKKEEAATTMATTTLLPSRPLSRFLAEKEKNPRSASHCNKNKKMCETMYGKGWQCCNNKCVDLRNDKHNCGGCKKKCKYTAECCGGQCVDVAYDKRHCGSCNNRCQRGRIYL Homology
BLAST of Carg25354 vs. NCBI nr
Match: KAG7028415.1 (Stigma-specific STIG1-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 297.0 bits (759), Expect = 8.9e-77 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of Carg25354 vs. NCBI nr
Match: KAG6596936.1 (Stigma-specific STIG1-like protein 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 287.3 bits (734), Expect = 7.1e-74 Identity = 139/141 (98.58%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of Carg25354 vs. NCBI nr
Match: XP_022946387.1 (stigma-specific STIG1-like protein 1 [Cucurbita moschata]) HSP 1 Score: 278.5 bits (711), Expect = 3.3e-71 Identity = 137/143 (95.80%), Postives = 139/143 (97.20%), Query Frame = 0
BLAST of Carg25354 vs. NCBI nr
Match: XP_023547467.1 (stigma-specific STIG1-like protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 273.9 bits (699), Expect = 8.1e-70 Identity = 134/141 (95.04%), Postives = 137/141 (97.16%), Query Frame = 0
BLAST of Carg25354 vs. NCBI nr
Match: XP_023005585.1 (stigma-specific STIG1-like protein 1 [Cucurbita maxima]) HSP 1 Score: 269.2 bits (687), Expect = 2.0e-68 Identity = 132/141 (93.62%), Postives = 135/141 (95.74%), Query Frame = 0
BLAST of Carg25354 vs. ExPASy Swiss-Prot
Match: Q9SZ28 (Stigma-specific STIG1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At4g26880 PE=3 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 2.0e-23 Identity = 65/147 (44.22%), Postives = 86/147 (58.50%), Query Frame = 0
BLAST of Carg25354 vs. ExPASy Swiss-Prot
Match: Q9FLQ0 (Stigma-specific STIG1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g55110 PE=3 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.0e-22 Identity = 67/150 (44.67%), Postives = 83/150 (55.33%), Query Frame = 0
BLAST of Carg25354 vs. ExPASy Swiss-Prot
Match: Q9C6T5 (Stigma-specific STIG1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At1g50720 PE=2 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 2.2e-22 Identity = 62/141 (43.97%), Postives = 83/141 (58.87%), Query Frame = 0
BLAST of Carg25354 vs. ExPASy Swiss-Prot
Match: Q9C6P6 (Stigma-specific STIG1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=KRS PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 7.5e-10 Identity = 24/55 (43.64%), Postives = 34/55 (61.82%), Query Frame = 0
BLAST of Carg25354 vs. ExPASy Swiss-Prot
Match: Q6EEH1 (Protein STIG1 OS=Solanum lycopersicum OX=4081 GN=STIG1 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08 Identity = 28/67 (41.79%), Postives = 35/67 (52.24%), Query Frame = 0
BLAST of Carg25354 vs. ExPASy TrEMBL
Match: A0A6J1G3L0 (stigma-specific STIG1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111450462 PE=3 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 1.6e-71 Identity = 137/143 (95.80%), Postives = 139/143 (97.20%), Query Frame = 0
BLAST of Carg25354 vs. ExPASy TrEMBL
Match: A0A6J1KXT3 (stigma-specific STIG1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111498525 PE=3 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 9.7e-69 Identity = 132/141 (93.62%), Postives = 135/141 (95.74%), Query Frame = 0
BLAST of Carg25354 vs. ExPASy TrEMBL
Match: A0A6J1DAS6 (stigma-specific STIG1-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111019254 PE=3 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 2.0e-45 Identity = 93/141 (65.96%), Postives = 108/141 (76.60%), Query Frame = 0
BLAST of Carg25354 vs. ExPASy TrEMBL
Match: A0A6J1EWI7 (stigma-specific STIG1-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111438619 PE=3 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 7.5e-45 Identity = 95/141 (67.38%), Postives = 107/141 (75.89%), Query Frame = 0
BLAST of Carg25354 vs. ExPASy TrEMBL
Match: A0A0A0L4Y5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G067250 PE=3 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 9.7e-45 Identity = 95/141 (67.38%), Postives = 107/141 (75.89%), Query Frame = 0
BLAST of Carg25354 vs. TAIR 10
Match: AT4G26880.1 (Stigma-specific Stig1 family protein ) HSP 1 Score: 110.2 bits (274), Expect = 1.4e-24 Identity = 65/147 (44.22%), Postives = 86/147 (58.50%), Query Frame = 0
BLAST of Carg25354 vs. TAIR 10
Match: AT5G55110.1 (Stigma-specific Stig1 family protein ) HSP 1 Score: 107.8 bits (268), Expect = 7.2e-24 Identity = 67/150 (44.67%), Postives = 83/150 (55.33%), Query Frame = 0
BLAST of Carg25354 vs. TAIR 10
Match: AT1G50720.1 (Stigma-specific Stig1 family protein ) HSP 1 Score: 106.7 bits (265), Expect = 1.6e-23 Identity = 62/141 (43.97%), Postives = 83/141 (58.87%), Query Frame = 0
BLAST of Carg25354 vs. TAIR 10
Match: AT1G11925.1 (Stigma-specific Stig1 family protein ) HSP 1 Score: 88.2 bits (217), Expect = 5.9e-18 Identity = 35/72 (48.61%), Postives = 47/72 (65.28%), Query Frame = 0
BLAST of Carg25354 vs. TAIR 10
Match: AT1G50650.1 (Stigma-specific Stig1 family protein ) HSP 1 Score: 65.1 bits (157), Expect = 5.3e-11 Identity = 24/55 (43.64%), Postives = 34/55 (61.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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