Carg25144 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25144
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic
Location	Carg_Chr02: 2550550 .. 2554340 (-)
RNA-Seq Expression	Carg25144
Synteny	Carg25144

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAGAGCCGAATGAAAGGGCCCAAACAAACCAAACCCTCGCGCGGAGCCTGAGAAAAACGCAAGCAGCAGCGTGCAAAGGGGCGGCATCCACATGGTGAGCAAAGGAACGCCTCTTGCAAACCGCAAAACCCCAATTCGCAGCCACAAAAATTAAGGAAAAAAACCAAAAGAAATTGGGATAATCCGACTCAGAATCCCACGAAAGGCTCACAACAATCCACGCACCCACAAATCTTTTTCCAAAACCCCAAATCTCCAATGGGTCGCACCCATTTCTCTTCTCCGAGAATCACTGCAATCGGAGAAGACACAAGTAGATGCTTCGGCTGAATGTATACTGCAGCAGTTGCTGCTCTCTGATTCCAGAAGGCAGAGATGTGAGGACTGGCTTTGGATTTGGGCCGTCTCTGGTGATCCGATTGAGGCGAAATCGGAGGCTGAATCGAAGGGTTTTAGCCAAAGCCTTGAAGGATGATCAGAAAGACGGCGCCGGCGGCAGATTTCCCGGCCAGAAATGGGACCCTGGTTTGGAAATTGAAGTCCCTTTTGAACAACGGCCGGTATGGATAGTTTTCTATAAAATATTCAGCGTTCATGCCGTTTCTCTGTTTCGAATTTCCATAAGCATATTCATAATTCTCTTCGTATTTCGGAGAGATTAAACATTCTTCTGCTTCATCTTGGGATAAACATTGTCAAAACTCATGAGCATTCTTATGGGTAAGAGTGAGAATCAAAAAGTAGAGTAGATGGGAATAACAACATTATTCCTACTTTTTCGAAGTGCTTAAAATCATTGGTTTAGAAACACACTGGATTAGTTCTTCGAATTAATAATATTTAAGGCTTAATAAACAACTTTTCATTTTTTTTAAACATTTTATATTGTGGGTAGTTGCTAATCTAGCCTAATTCGAATAGAATGCTGCAAAAATAATTGCTACAACTTTTTTGTATTAAAAGTTTAACATCTGGCGTGGAGGAATCTCTACCAACCTCTTAGTTGAGCTTGCTTGTTTATGCTTTAATCTATTTAGTTGAGATAACATAACTATTAATTAATGATTAACATAGCTATCAACTAGTGATTAATATAACTGTTGTTCATTACCATCCACTGTATTATTGATTAAACTAATGGACATCACTAAAGAAGTGATGAATAACTTTTTTAATAACAAACTCTATATATTCAAATATTTTAGCAACACCCATCCATTCTTTTTTATTCGTAAAACCAGGCTAAGATCTCGGAAATTGTTTGTAACAGTTGAAAACCTTAAATAAAAAAAAAGAAAAGAAAGGAAAGATAAAAGAGGAGGTGTCTCAACCATGTTACTGAAAAATGATTTATGTAGTAATGACAAGGACAAGACTATTATTTGAGAAGTTTTATCATTCTTTAGGGATGAAATTGAAACTTTTGAATCATAGAGACCAATATAGAAGATGTAGCCAAATCATAGGAACCAAATTGAGCCTAAATCTTGAAACTTTTTAGAAACGAACGGATGAAATTCAATTGAATCCCATTGAATAAGGTGGATGATTTAGAAGCATTATGTGTGGGAGTGCAGGTGAATGAATACTCATCTCTAAAAGACTCTGCATTGTATTCATGGGGAGAGCTGGGAGCTGGGCCATTCTTCCTTCGCCTTGGAGGGCTTTGGTTAGTAAGTTTCACGGTCTTAGGAGTTCCCGTTGCGGCCGCAAGCTTCAATCCTTCAAGGGTACCTAACCAACTAATCATCCAATCTAATAATATTGAATTTGAAGAATGCTTTGAATCTTTCTGTGCTTACTTTTTTGTTTGTTTCAGGAACCTTTGCGATTTGTGCTTGCTGCTGGAATTGGAACTCTTCTCCTCGTCTCCTTGATTGTCCTGAGAATATATCTGGCAAGTTCTTCCATTATTGATTATTGGAGTTCTGGCTTGGGTGAAATAATCATTTCTTTGTCACTTCATTCAATAATTCACTTGCTGTTTTTATGTTAATTTTCAAGGCCACAAATAGAGGAAAGAGTTCAAAAATATCCTTAAAAGAACAAATATTATCATAATTTATGGCCTAAACTTTTAGTCTATTGGGTAGTTTAACCGTAGATGGGATTGTGGTTTCAGGGTTGGAGTTACGTGGGAGATAGGCTGTTATCGGCAGTCATACCTTACGAAGAGAGTGGATGGTATGACGGCCAAATGTGGGTTAAACCCCCTGAGGTGAGTTACTCTTAACTACAAACTCATTATTTCACTCTTCCTCTCACTTTAGCTACAAAATTTAAACGACATGCTTTGTTTTTGCCTTTTCTTTTAATAGTAGGCACTCAAACTTTGTTTTATTTCGATTGATATATTCTTTTGTGAAAGAACCTGAAATGTATGGTGATATGAGCATTGAAAAATGTGGATTGGTTATTCATTTACTAACGCACAAGAAATTTGGTTGAGTTATTTATTTATTAATTATTCCTTGTGGGGCAAGTTTTCATGTGTATCTTAAGCATTCTTTGTGAGTCCGATTGTTGGATCATTACATGCCTTTGTTCAATTTAAATGATAAACCTTAATTTTGATGACGAGTCATACTTTGATTTTCTCCAACTTTATCACGTTAAACTTTTGGGTTTCGCTCTAGAGTTGTCATCGCTACAATGTTATTTCCTCTCCGTTTCAAATAGTAATTCACTTGCTCGGCCTTGTGTGCGTTGTGAGGGGACTGTTAAGAATATGCTAATTCTTTTTAATTTACCACCCTTTCTGTTGGCTTTAGTTTTGAGTGTGGAGTTCATTTAATCTTCTCTTGATTCTTTGGAAGGAAAGAAATCAAAGAATTGATAAGTTTTCGCCTTTTGAGCCTTTCGGTTCGAGTGTGCGGTTTTTTGCTTCTTGGTGGTGTTCTACAACTAAATGTTCTTTTGTTTGTAATTATAGTCTTCTTATGGCTGTTCTAGATGTTCTTTTGTAGCTTGCTTGGATTGGGGATATTTTTTCTCCTCTTGAATGTATTCTCAGTTTCTCATTGTCGTTGTAGGTTCTGGCTCGTGATAGATTGTTAGGATCTTACAAGGTATTTTATCGAATACCGATATGATAAACTTTGGAGAAAATTTATTCTAATACGAAATACTATCTAAATCTTCATTTAACTAAAGAAAAAAAATTCAATATCTACAGGTTAAACCAGTGATCAACATGCTGAAACAAACTCTAGTTGGAACAGGGGTTGTTCTTGTCTCAGCTGTACTATTGTTCATATTTTCGACACCAGTGGAGGATTTTGTACAAACCACATTTTCCTCAAAACAAAGCACATCATCCAACGTTAATCCAGATTCAATCATCAACAAAAAATACAACTTAAGGTAATGAATGAGTTGAGGCCTGTTGTTTCCCCTCTTCCTGTATTCTACTTCACAACTTAGCAATGAATTTATATGTTTGTAGAAAGGATGAGTTGCTTCGGTTACCAGTCGAGGTCATGGCCGACGACGAGCTTGCAGCGGCAGCAGCGGAGGCAGCCGATGGAAGACCAGTTTACTGTAGAGATCGGTATTACCGAGCATTAGCAGGAGGACAATACTGCAAATGGGAGGACTTGGTCAAGTAAATACAAAGCTAGGTAAGAAATATTCAAAAGCAACTTGGTTTGTGTTTAAGCTGGGGAAGAAATGTTCAAATGATTGTATGATTCTACATGGTTTGGCAATTAATTGTAAGCCTTATTTTTTATATTTGTTACAATATTCCTAATAAGTTTTTGTTATGAAAGGTTATGGAAAGAGAATTACT

mRNA sequence

ACAGAGCCGAATGAAAGGGCCCAAACAAACCAAACCCTCGCGCGGAGCCTGAGAAAAACGCAAGCAGCAGCGTGCAAAGGGGCGGCATCCACATGGTGAGCAAAGGAACGCCTCTTGCAAACCGCAAAACCCCAATTCGCAGCCACAAAAATTAAGGAAAAAAACCAAAAGAAATTGGGATAATCCGACTCAGAATCCCACGAAAGGCTCACAACAATCCACGCACCCACAAATCTTTTTCCAAAACCCCAAATCTCCAATGGGTCGCACCCATTTCTCTTCTCCGAGAATCACTGCAATCGGAGAAGACACAAGTAGATGCTTCGGCTGAATGTATACTGCAGCAGTTGCTGCTCTCTGATTCCAGAAGGCAGAGATGTGAGGACTGGCTTTGGATTTGGGCCGTCTCTGGTGATCCGATTGAGGCGAAATCGGAGGCTGAATCGAAGGGTTTTAGCCAAAGCCTTGAAGGATGATCAGAAAGACGGCGCCGGCGGCAGATTTCCCGGCCAGAAATGGGACCCTGGTTTGGAAATTGAAGTCCCTTTTGAACAACGGCCGGTGAATGAATACTCATCTCTAAAAGACTCTGCATTGTATTCATGGGGAGAGCTGGGAGCTGGGCCATTCTTCCTTCGCCTTGGAGGGCTTTGGTTAGTAAGTTTCACGGTCTTAGGAGTTCCCGTTGCGGCCGCAAGCTTCAATCCTTCAAGGGAACCTTTGCGATTTGTGCTTGCTGCTGGAATTGGAACTCTTCTCCTCGTCTCCTTGATTGTCCTGAGAATATATCTGGCAAGTTCTTCCATTATTGATTATTGGAGTTCTGGCTTGGGTGAAATAATCATTTCTTTGGTTGGAGTTACGTGGGAGATAGGCTGTTATCGGCAGTCATACCTTACGAAGAGAGTGGATGGTATGACGGCCAAATGTGGGTTAAACCCCCTGAGGAAAGAAATCAAAGAATTGATAAGTTTTCGCCTTTTGAGCCTTTCGGTTCTGGCTCGTGATAGATTGTTAGGATCTTACAAGGTTAAACCAGTGATCAACATGCTGAAACAAACTCTAGTTGGAACAGGGGTTGTTCTTGTCTCAGCTGTACTATTGTTCATATTTTCGACACCAGTGGAGGATTTTGTACAAACCACATTTTCCTCAAAACAAAGCACATCATCCAACGTTAATCCAGATTCAATCATCAACAAAAAATACAACTTAAGAAAGGATGAGTTGCTTCGGTTACCAGTCGAGGTCATGGCCGACGACGAGCTTGCAGCGGCAGCAGCGGAGGCAGCCGATGGAAGACCAGTTTACTGTAGAGATCGGTATTACCGAGCATTAGCAGGAGGACAATACTGCAAATGGGAGGACTTGGTCAAGTAAATACAAAGCTAGGTAAGAAATATTCAAAAGCAACTTGGTTTGTGTTTAAGCTGGGGAAGAAATGTTCAAATGATTGTATGATTCTACATGGTTTGGCAATTAATTGTAAGCCTTATTTTTTATATTTGTTACAATATTCCTAATAAGTTTTTGTTATGAAAGGTTATGGAAAGAGAATTACT

Coding sequence (CDS)

ATGCTTCGGCTGAATGTATACTGCAGCAGTTGCTGCTCTCTGATTCCAGAAGGCAGAGATGTGAGGACTGGCTTTGGATTTGGGCCGTCTCTGGTGATCCGATTGAGGCGAAATCGGAGGCTGAATCGAAGGGTTTTAGCCAAAGCCTTGAAGGATGATCAGAAAGACGGCGCCGGCGGCAGATTTCCCGGCCAGAAATGGGACCCTGGTTTGGAAATTGAAGTCCCTTTTGAACAACGGCCGGTGAATGAATACTCATCTCTAAAAGACTCTGCATTGTATTCATGGGGAGAGCTGGGAGCTGGGCCATTCTTCCTTCGCCTTGGAGGGCTTTGGTTAGTAAGTTTCACGGTCTTAGGAGTTCCCGTTGCGGCCGCAAGCTTCAATCCTTCAAGGGAACCTTTGCGATTTGTGCTTGCTGCTGGAATTGGAACTCTTCTCCTCGTCTCCTTGATTGTCCTGAGAATATATCTGGCAAGTTCTTCCATTATTGATTATTGGAGTTCTGGCTTGGGTGAAATAATCATTTCTTTGGTTGGAGTTACGTGGGAGATAGGCTGTTATCGGCAGTCATACCTTACGAAGAGAGTGGATGGTATGACGGCCAAATGTGGGTTAAACCCCCTGAGGAAAGAAATCAAAGAATTGATAAGTTTTCGCCTTTTGAGCCTTTCGGTTCTGGCTCGTGATAGATTGTTAGGATCTTACAAGGTTAAACCAGTGATCAACATGCTGAAACAAACTCTAGTTGGAACAGGGGTTGTTCTTGTCTCAGCTGTACTATTGTTCATATTTTCGACACCAGTGGAGGATTTTGTACAAACCACATTTTCCTCAAAACAAAGCACATCATCCAACGTTAATCCAGATTCAATCATCAACAAAAAATACAACTTAAGAAAGGATGAGTTGCTTCGGTTACCAGTCGAGGTCATGGCCGACGACGAGCTTGCAGCGGCAGCAGCGGAGGCAGCCGATGGAAGACCAGTTTACTGTAGAGATCGGTATTACCGAGCATTAGCAGGAGGACAATACTGCAAATGGGAGGACTTGGTCAAGTAA

Protein sequence

MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGGRFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLGVPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLASSSIIDYWSSGLGEIIISLVGVTWEIGCYRQSYLTKRVDGMTAKCGLNPLRKEIKELISFRLLSLSVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK

Homology

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BLAST of Carg25144 vs. NCBI nr
Match: KAG7035179.1 (putative protein ycf36 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 690.3 bits (1780), Expect = 8.9e-195
Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60
           MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG
Sbjct: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60

Query: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG
Sbjct: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLASSSIIDYWSSGLGEIIISLVG 180
           VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLASSSIIDYWSSGLGEIIISLVG
Sbjct: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLASSSIIDYWSSGLGEIIISLVG 180

Query: 181 VTWEIGCYRQSYLTKRVDGMTAKCGLNPLRKEIKELISFRLLSLSVLARDRLLGSYKVKP 240
           VTWEIGCYRQSYLTKRVDGMTAKCGLNPLRKEIKELISFRLLSLSVLARDRLLGSYKVKP
Sbjct: 181 VTWEIGCYRQSYLTKRVDGMTAKCGLNPLRKEIKELISFRLLSLSVLARDRLLGSYKVKP 240

Query: 241 VINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINKKYNLR 300
           VINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINKKYNLR
Sbjct: 241 VINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINKKYNLR 300

Query: 301 KDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK 354
           KDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK
Sbjct: 301 KDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK 353

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BLAST of Carg25144 vs. NCBI nr
Match: XP_022947583.1 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita moschata] >KAG6605201.1 Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 544.3 bits (1401), Expect = 7.9e-151
Identity = 295/353 (83.57%), Postives = 300/353 (84.99%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60
           MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG
Sbjct: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60

Query: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG
Sbjct: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLASSSIIDYWSSGLGEIIISLVG 180
           VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL        WS  +G+ ++S V 
Sbjct: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLG-------WSY-VGDRLLSAVI 180

Query: 181 VTWEIGCYRQSYLTKRVDGMTAKCGLNPLRKEIKELISFRLLSLSVLARDRLLGSYKVKP 240
              E G Y      K  +                           VLARDRLLGSYKVKP
Sbjct: 181 PYEESGWYDGQMWVKPPE---------------------------VLARDRLLGSYKVKP 240

Query: 241 VINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINKKYNLR 300
           VINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINKKYNLR
Sbjct: 241 VINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINKKYNLR 300

Query: 301 KDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK 354
           KDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK
Sbjct: 301 KDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK 318

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BLAST of Carg25144 vs. NCBI nr
Match: XP_023534221.1 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023534222.1 protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 542.7 bits (1397), Expect = 2.3e-150
Identity = 294/353 (83.29%), Postives = 299/353 (84.70%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60
           MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIR RRNRRLNRRVLAKALKDDQKDGAGG
Sbjct: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRFRRNRRLNRRVLAKALKDDQKDGAGG 60

Query: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG
Sbjct: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLASSSIIDYWSSGLGEIIISLVG 180
           VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL        WS  +G+ ++S V 
Sbjct: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLG-------WSY-VGDRLLSAVI 180

Query: 181 VTWEIGCYRQSYLTKRVDGMTAKCGLNPLRKEIKELISFRLLSLSVLARDRLLGSYKVKP 240
              E G Y      K  +                           VLARDRLLGSYKVKP
Sbjct: 181 PYEESGWYDGQMWVKPPE---------------------------VLARDRLLGSYKVKP 240

Query: 241 VINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINKKYNLR 300
           VINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINKKYNLR
Sbjct: 241 VINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINKKYNLR 300

Query: 301 KDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK 354
           KDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK
Sbjct: 301 KDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK 318

[Close]

BLAST of Carg25144 vs. NCBI nr
Match: XP_023006930.1 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita maxima])

HSP 1 Score: 542.0 bits (1395), Expect = 3.9e-150
Identity = 294/353 (83.29%), Postives = 299/353 (84.70%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60
           MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG
Sbjct: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60

Query: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG
Sbjct: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLASSSIIDYWSSGLGEIIISLVG 180
           VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL        WS  +G+ ++S V 
Sbjct: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLG-------WSY-VGDRLLSAVI 180

Query: 181 VTWEIGCYRQSYLTKRVDGMTAKCGLNPLRKEIKELISFRLLSLSVLARDRLLGSYKVKP 240
              E G Y      K  +                           VLARDRLLGSYKVKP
Sbjct: 181 PYEESGWYDGQMWVKPPE---------------------------VLARDRLLGSYKVKP 240

Query: 241 VINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINKKYNLR 300
           VINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTT SSKQSTSSNVNPDSIINKKYNLR
Sbjct: 241 VINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTLSSKQSTSSNVNPDSIINKKYNLR 300

Query: 301 KDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK 354
           KDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK
Sbjct: 301 KDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK 318

[Close]

BLAST of Carg25144 vs. NCBI nr
Match: XP_038900298.1 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Benincasa hispida])

HSP 1 Score: 473.0 bits (1216), Expect = 2.2e-129
Identity = 261/353 (73.94%), Postives = 276/353 (78.19%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60
           M RLNVYCSSCCSLI   +DVRT F F      +LR NRRLN RVLAKALKDDQ DG GG
Sbjct: 1   MFRLNVYCSSCCSLIRNSKDVRTSFRF------QLRPNRRLNPRVLAKALKDDQTDGGGG 60

Query: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RF GQKWDPGLEIEVPFEQRPVNEYSSLKDS LYSWGELGAGPFFLRLGGLWL SF VLG
Sbjct: 61  RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSVLYSWGELGAGPFFLRLGGLWLGSFIVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLASSSIIDYWSSGLGEIIISLVG 180
           +PVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL        WS  +G+ ++S V 
Sbjct: 121 IPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLG-------WSY-VGDRLLSAVI 180

Query: 181 VTWEIGCYRQSYLTKRVDGMTAKCGLNPLRKEIKELISFRLLSLSVLARDRLLGSYKVKP 240
              E G Y      K  +                           VLARDRLLGSYKVKP
Sbjct: 181 PYEESGWYDGQMWVKPPE---------------------------VLARDRLLGSYKVKP 240

Query: 241 VINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINKKYNLR 300
           VINMLKQTLVGTG+VLVSAVLLFIF+TPVEDFVQT FSS Q+ SSNVNPDS INKKYNLR
Sbjct: 241 VINMLKQTLVGTGIVLVSAVLLFIFATPVEDFVQTRFSSNQNLSSNVNPDSDINKKYNLR 300

Query: 301 KDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK 354
           K++LL+LPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDL+K
Sbjct: 301 KEQLLQLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLIK 312

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BLAST of Carg25144 vs. ExPASy Swiss-Prot
Match: Q9FN15 (Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CGLD27 PE=2 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.1e-89
Identity = 190/321 (59.19%), Postives = 223/321 (69.47%), Query Frame = 0


Query: 37  RNRRLNRRVLAKALKDDQKDGAGG-RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYS 96
           + + L   V  KA++D   +G G   F GQ WDP  EIEVP +QRPVNEYSSLK+  LYS
Sbjct: 47  KKQELFLSVSVKAVEDKGNNGGGSMSFSGQSWDPSSEIEVPSDQRPVNEYSSLKEGMLYS 106

Query: 97  WGELGAGPFFLRLGGLWLVSFTVLGVPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLR 156
           WGELG   FF+RLGGLWLV+FTVLGVPVAAASFNPSREPLRF+LAAG GTL LVSLIVLR
Sbjct: 107 WGELGPSEFFIRLGGLWLVTFTVLGVPVAAASFNPSREPLRFILAAGTGTLFLVSLIVLR 166

Query: 157 IYLASSSIIDYWSSGLGEIIISLVGVTWEIGCYRQSYLTKRVDGMTAKCGLNPLRKEIKE 216
           IYL        WS  +G+ ++S V    E G Y      K  +                 
Sbjct: 167 IYLG-------WSY-VGDRLLSAVIPYEESGWYDGQMWVKPPE----------------- 226

Query: 217 LISFRLLSLSVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT 276
                     VLARDRLLGSYKVKPVI MLKQTL+GTG +LVSA +LF+F+TPVEDF +T
Sbjct: 227 ----------VLARDRLLGSYKVKPVIKMLKQTLIGTGALLVSAFVLFVFATPVEDFFKT 286

Query: 277 TFSSKQSTSSNVNPDSIINK---KYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYC 336
           T  S ++      P+  I++   K+N+RK++LLRLPV+V+ DD+LAAAAAEAADGRPVYC
Sbjct: 287 TLGSTEN-----QPEVSISRTSNKFNIRKEQLLRLPVDVVTDDDLAAAAAEAADGRPVYC 327

Query: 337 RDRYYRALAGGQYCKWEDLVK 354
           RDRYYRALAGGQYCKWEDLVK
Sbjct: 347 RDRYYRALAGGQYCKWEDLVK 327

[Close]

BLAST of Carg25144 vs. ExPASy Swiss-Prot
Match: P51273 (Uncharacterized protein ycf36 OS=Porphyra purpurea OX=2787 GN=ycf36 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 6.5e-07
Identity = 48/191 (25.13%), Postives = 87/191 (45.55%), Query Frame = 0


Query: 75  VPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLGVPVAAASFNPSREP 134
           VP EQ+PVNEY+SLK+S  + W  L +  +  ++  + L++   L  PV  + F  ++ P
Sbjct: 10  VPLEQQPVNEYNSLKNSWFFCWPTLSSHSYNKKI-TITLIATCFLVSPVLLSIFPIAKLP 69

Query: 135 LRFVLAAGIGTLLLVSLIVLRIYLASSSIIDYWSSGLGEIIISLVGVTWEIGCYRQSYLT 194
           L+F  +  I + L+   I++R+YL  S ++        + ++S      E G Y      
Sbjct: 70  LKFFFSEFIISSLITCFILIRLYLGWSYVV--------KRLMSATVFYEESGWYDGQIWV 129

Query: 195 KRVDGMTAKCGLNPLRKEIKELISFRLLSLSVLARDRLLGSYKVKPVINMLKQTLVGTGV 254
           K  +                           +L +DR +G Y+V P++N +K TL    +
Sbjct: 130 KPSE---------------------------ILVKDRFIGLYEVFPLLNKIKNTLSCLSL 164

Query: 255 VLVSAVLLFIF 266
           +  +  +LF +
Sbjct: 190 MTTAPAILFFY 164

[Close]

BLAST of Carg25144 vs. ExPASy Swiss-Prot
Match: Q1XDL3 (Uncharacterized protein ycf36 OS=Pyropia yezoensis OX=2788 GN=ycf36 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.5e-06
Identity = 48/191 (25.13%), Postives = 87/191 (45.55%), Query Frame = 0


Query: 75  VPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLGVPVAAASFNPSREP 134
           VP EQ+PV+EY+SLK+S  + W  L    +  ++  + L+   +L  P+  + F  ++ P
Sbjct: 10  VPKEQQPVHEYTSLKNSWFFCWPTLSRRSYNKKI-TIALLLNCLLVSPILLSIFPITKLP 69

Query: 135 LRFVLAAGIGTLLLVSLIVLRIYLASSSIIDYWSSGLGEIIISLVGVTWEIGCYRQSYLT 194
           L+F  +  I + L+   I++R+YL  S ++        + ++S      E G Y      
Sbjct: 70  LKFFFSEFITSSLMTGFILIRLYLGWSYVV--------KRLMSATVFYEESGWYDGQIWV 129

Query: 195 KRVDGMTAKCGLNPLRKEIKELISFRLLSLSVLARDRLLGSYKVKPVINMLKQTLVGTGV 254
           K  +                           +L +DR +G Y+V P++N +K TL    +
Sbjct: 130 KPSE---------------------------ILLKDRFIGLYEVFPLLNKIKNTLSFLSL 164

Query: 255 VLVSAVLLFIF 266
           ++   VLLF +
Sbjct: 190 MISGPVLLFFY 164

[Close]

BLAST of Carg25144 vs. ExPASy Swiss-Prot
Match: P48276 (Uncharacterized protein ycf36 OS=Cyanophora paradoxa OX=2762 GN=ycf36 PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 5.2e-04
Identity = 50/188 (26.60%), Postives = 81/188 (43.09%), Query Frame = 0


Query: 75  VPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLGVPVAAASFNPSREP 134
           +P EQ+P+NEY  L +S L++W       +F  L  ++ + F +L   +   +      P
Sbjct: 7   IPTEQQPLNEYQILNNSVLFNWPSQKLKIYFFYLFTIYSIGF-LLTFLITFYNDLFIVHP 66

Query: 135 LRFVLAAGIGTLLLVSLIVLRIYLASSSIIDYWSSGLGEIIISLVGVTWEIGCYRQSYLT 194
           +   +   IG   ++ L +LR+YL        WS     ++ + V    E G Y      
Sbjct: 67  VNIFVHGIIGGNFVLILDLLRLYLG-------WSYICQRLLSATVSYE-ESGWYDGQIWV 126

Query: 195 KRVDGMTAKCGLNPLRKEIKELISFRLLSLSVLARDRLLGSYKVKPVINMLKQTLVGTGV 254
           K                           S  VL +DRL+G Y+V+PV+N LKQTL G  +
Sbjct: 127 K---------------------------SSEVLIQDRLIGIYQVRPVLNRLKQTL-GVVI 157

Query: 255 VLVSAVLL 263
           +++   LL
Sbjct: 187 LILGFTLL 157

[Close]

BLAST of Carg25144 vs. ExPASy TrEMBL
Match: A0A6J1G705 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451407 PE=4 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 3.8e-151
Identity = 295/353 (83.57%), Postives = 300/353 (84.99%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60
           MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG
Sbjct: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60

Query: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG
Sbjct: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLASSSIIDYWSSGLGEIIISLVG 180
           VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL        WS  +G+ ++S V 
Sbjct: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLG-------WSY-VGDRLLSAVI 180

Query: 181 VTWEIGCYRQSYLTKRVDGMTAKCGLNPLRKEIKELISFRLLSLSVLARDRLLGSYKVKP 240
              E G Y      K  +                           VLARDRLLGSYKVKP
Sbjct: 181 PYEESGWYDGQMWVKPPE---------------------------VLARDRLLGSYKVKP 240

Query: 241 VINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINKKYNLR 300
           VINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINKKYNLR
Sbjct: 241 VINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINKKYNLR 300

Query: 301 KDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK 354
           KDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK
Sbjct: 301 KDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK 318

[Close]

BLAST of Carg25144 vs. ExPASy TrEMBL
Match: A0A6J1L1J9 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111499573 PE=4 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.9e-150
Identity = 294/353 (83.29%), Postives = 299/353 (84.70%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60
           MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG
Sbjct: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60

Query: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG
Sbjct: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLASSSIIDYWSSGLGEIIISLVG 180
           VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL        WS  +G+ ++S V 
Sbjct: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLG-------WSY-VGDRLLSAVI 180

Query: 181 VTWEIGCYRQSYLTKRVDGMTAKCGLNPLRKEIKELISFRLLSLSVLARDRLLGSYKVKP 240
              E G Y      K  +                           VLARDRLLGSYKVKP
Sbjct: 181 PYEESGWYDGQMWVKPPE---------------------------VLARDRLLGSYKVKP 240

Query: 241 VINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINKKYNLR 300
           VINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTT SSKQSTSSNVNPDSIINKKYNLR
Sbjct: 241 VINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTLSSKQSTSSNVNPDSIINKKYNLR 300

Query: 301 KDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK 354
           KDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK
Sbjct: 301 KDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK 318

[Close]

BLAST of Carg25144 vs. ExPASy TrEMBL
Match: A0A6J1D5Q7 (uncharacterized protein LOC111017873 OS=Momordica charantia OX=3673 GN=LOC111017873 PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 3.1e-129
Identity = 256/353 (72.52%), Postives = 278/353 (78.75%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60
           MLRLN+YCS C  LI  GRDVR GFG+G S VIRLR NRRL+  V AKALKDDQ+DG GG
Sbjct: 1   MLRLNLYCSGCGCLIRSGRDVRGGFGYGSSWVIRLRGNRRLSPGVSAKALKDDQRDGGGG 60

Query: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RFPG+ WDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG GPFFLRLGGLWL SFT+LG
Sbjct: 61  RFPGRSWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGTGPFFLRLGGLWLASFTLLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLASSSIIDYWSSGLGEIIISLVG 180
           VP+AAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL        WS  +G+ ++S V 
Sbjct: 121 VPIAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLG-------WSY-VGDRLLSAVI 180

Query: 181 VTWEIGCYRQSYLTKRVDGMTAKCGLNPLRKEIKELISFRLLSLSVLARDRLLGSYKVKP 240
              E G Y      K  +                           VLARDRLLGSYKVKP
Sbjct: 181 PYEESGWYDGQMWVKPPE---------------------------VLARDRLLGSYKVKP 240

Query: 241 VINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINKKYNLR 300
           VI MLKQTLVGTG+VLVSAVLLFIFSTPVE F+QTTFS++QS+ SNVN D  IN+KYNLR
Sbjct: 241 VIKMLKQTLVGTGIVLVSAVLLFIFSTPVEGFLQTTFSTRQSSPSNVNQDPNINRKYNLR 300

Query: 301 KDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK 354
           K+ELLRLPVEV+ADDELAAAAAEAADGRPVYCRDR+YRALAGGQYCKWEDL+K
Sbjct: 301 KEELLRLPVEVLADDELAAAAAEAADGRPVYCRDRFYRALAGGQYCKWEDLIK 318

[Close]

BLAST of Carg25144 vs. ExPASy TrEMBL
Match: A0A5A7TRK5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G003010 PE=4 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 1.6e-128
Identity = 256/356 (71.91%), Postives = 279/356 (78.37%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60
           MLRLN+YC+SCCSLI   ++V T F F      +LR NRRLN RVLAKALKDDQ DG GG
Sbjct: 1   MLRLNLYCTSCCSLIRNNKNVTTSFRF------QLRPNRRLNPRVLAKALKDDQTDGGGG 60

Query: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RF GQKWDPGLEIEVPFEQRPVNEYSSLKDS  YSWGELGAGPFF+RLGGLWL SF VLG
Sbjct: 61  RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSTFYSWGELGAGPFFIRLGGLWLGSFIVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLASSSIIDYWSSG---LGEIIIS 180
           +PVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLA  + ++ W  G   +G+ ++S
Sbjct: 121 IPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLA--TWMELWFQGWSYVGDRLLS 180

Query: 181 LVGVTWEIGCYRQSYLTKRVDGMTAKCGLNPLRKEIKELISFRLLSLSVLARDRLLGSYK 240
            V    E G Y      K  +                           VLARDRLLGSYK
Sbjct: 181 AVIPYEESGWYDGQMWVKPPE---------------------------VLARDRLLGSYK 240

Query: 241 VKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINKKY 300
           VKPVINMLKQTLVGTG+VLVS VLLFIF+TPVEDF+QTTFSS Q+ SS++NPDS INKKY
Sbjct: 241 VKPVINMLKQTLVGTGIVLVSGVLLFIFATPVEDFLQTTFSSNQTLSSSINPDSNINKKY 300

Query: 301 NLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK 354
           NLRKD+LLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDL+K
Sbjct: 301 NLRKDQLLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLIK 321

[Close]

BLAST of Carg25144 vs. ExPASy TrEMBL
Match: A0A5D3BLA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00680 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 1.3e-127
Identity = 255/353 (72.24%), Postives = 275/353 (77.90%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60
           MLRLN+YC+SCCSLI   ++V T F F      +LR NRRLN RVLAKALKDDQ DG GG
Sbjct: 1   MLRLNLYCTSCCSLIRNNKNVTTSFRF------QLRPNRRLNPRVLAKALKDDQTDGGGG 60

Query: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RF GQKWDPGLEIEVPFEQRPVNEYSSLKDS  YSWGELGAGPFF+RLGGLWL SF VLG
Sbjct: 61  RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSTFYSWGELGAGPFFIRLGGLWLGSFIVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLASSSIIDYWSSGLGEIIISLVG 180
           +PVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL        WS  +G+ ++S V 
Sbjct: 121 IPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLG-------WSY-VGDRLLSAVI 180

Query: 181 VTWEIGCYRQSYLTKRVDGMTAKCGLNPLRKEIKELISFRLLSLSVLARDRLLGSYKVKP 240
              E G Y      K  +                           VLARDRLLGSYKVKP
Sbjct: 181 PYEESGWYDGQMWVKPPE---------------------------VLARDRLLGSYKVKP 240

Query: 241 VINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINKKYNLR 300
           VINMLKQTLVGTG+VLVS VLLFIF+TPVEDF+QTTFSS Q+ SS++NPDS INKKYNLR
Sbjct: 241 VINMLKQTLVGTGIVLVSGVLLFIFATPVEDFLQTTFSSNQTLSSSINPDSNINKKYNLR 300

Query: 301 KDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK 354
           KD+LLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDL+K
Sbjct: 301 KDQLLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLIK 312

[Close]

BLAST of Carg25144 vs. TAIR 10
Match: AT5G67370.1 (Protein of unknown function (DUF1230) )

HSP 1 Score: 331.6 bits (849), Expect = 7.5e-91
Identity = 190/321 (59.19%), Postives = 223/321 (69.47%), Query Frame = 0


Query: 37  RNRRLNRRVLAKALKDDQKDGAGG-RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYS 96
           + + L   V  KA++D   +G G   F GQ WDP  EIEVP +QRPVNEYSSLK+  LYS
Sbjct: 47  KKQELFLSVSVKAVEDKGNNGGGSMSFSGQSWDPSSEIEVPSDQRPVNEYSSLKEGMLYS 106

Query: 97  WGELGAGPFFLRLGGLWLVSFTVLGVPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLR 156
           WGELG   FF+RLGGLWLV+FTVLGVPVAAASFNPSREPLRF+LAAG GTL LVSLIVLR
Sbjct: 107 WGELGPSEFFIRLGGLWLVTFTVLGVPVAAASFNPSREPLRFILAAGTGTLFLVSLIVLR 166

Query: 157 IYLASSSIIDYWSSGLGEIIISLVGVTWEIGCYRQSYLTKRVDGMTAKCGLNPLRKEIKE 216
           IYL        WS  +G+ ++S V    E G Y      K  +                 
Sbjct: 167 IYLG-------WSY-VGDRLLSAVIPYEESGWYDGQMWVKPPE----------------- 226

Query: 217 LISFRLLSLSVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT 276
                     VLARDRLLGSYKVKPVI MLKQTL+GTG +LVSA +LF+F+TPVEDF +T
Sbjct: 227 ----------VLARDRLLGSYKVKPVIKMLKQTLIGTGALLVSAFVLFVFATPVEDFFKT 286

Query: 277 TFSSKQSTSSNVNPDSIINK---KYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYC 336
           T  S ++      P+  I++   K+N+RK++LLRLPV+V+ DD+LAAAAAEAADGRPVYC
Sbjct: 287 TLGSTEN-----QPEVSISRTSNKFNIRKEQLLRLPVDVVTDDDLAAAAAEAADGRPVYC 327

Query: 337 RDRYYRALAGGQYCKWEDLVK 354
           RDRYYRALAGGQYCKWEDLVK
Sbjct: 347 RDRYYRALAGGQYCKWEDLVK 327

[Close]

BLAST of Carg25144 vs. TAIR 10
Match: AT5G11840.1 (Protein of unknown function (DUF1230) )

HSP 1 Score: 68.9 bits (167), Expect = 9.1e-12
Identity = 65/197 (32.99%), Postives = 91/197 (46.19%), Query Frame = 0


Query: 69  PGLEIEVPFEQRPVNEYSSLKDSALYSW--GELGAGPFFLRLGGLWLVSFTVLGVPVA-A 128
           P  +  VP EQ+P+NEY SL  S  +SW  G+L      L L G     F  +G+PV+  
Sbjct: 57  PETDCPVPPEQQPINEYQSLSTSFPFSWASGDLIEYSTRLFLTGASFAFF--VGLPVSWF 116

Query: 129 ASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLASSSIIDYWSSGLGEIIISLVGVTWEI 188
            S  P  EP++ +LAA    + +V+L V+R+YL        W+  +G  ++S      E 
Sbjct: 117 GSIGPEYEPVKRILAASSSGIFVVTLAVVRMYLG-------WAY-VGNRLLSATVEYEET 176

Query: 189 GCYRQSYLTKRVDGMTAKCGLNPLRKEIKELISFRLLSLSVLARDRLLGSYKVKPVINML 248
           G Y      K  +                           VLARDRLLGS+ VKPV+  L
Sbjct: 177 GWYDGQVWVKTPE---------------------------VLARDRLLGSFSVKPVLARL 216

Query: 249 KQTLVGTGVVLVSAVLL 263
           K TLV  G+ L+  + L
Sbjct: 237 KNTLVILGLSLILVINL 216

The following BLAST results are available for this feature:

BLAST of Carg25144 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035179.1	8.9e-195	100.00	putative protein ycf36 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022947583.1	7.9e-151	83.57	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita ...	[more]
XP_023534221.1	2.3e-150	83.29	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita ...	[more]
XP_023006930.1	3.9e-150	83.29	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita ...	[more]
XP_038900298.1	2.2e-129	73.94	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Benincasa ...	[more]

BLAST of Carg25144 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FN15	1.1e-89	59.19	Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Arabidop...	[more]
P51273	6.5e-07	25.13	Uncharacterized protein ycf36 OS=Porphyra purpurea OX=2787 GN=ycf36 PE=3 SV=1	[more]
Q1XDL3	5.5e-06	25.13	Uncharacterized protein ycf36 OS=Pyropia yezoensis OX=2788 GN=ycf36 PE=3 SV=1	[more]
P48276	5.2e-04	26.60	Uncharacterized protein ycf36 OS=Cyanophora paradoxa OX=2762 GN=ycf36 PE=3 SV=1	[more]

BLAST of Carg25144 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G705	3.8e-151	83.57	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Cucurbit...	[more]
A0A6J1L1J9	1.9e-150	83.29	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Cucurbit...	[more]
A0A6J1D5Q7	3.1e-129	72.52	uncharacterized protein LOC111017873 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A5A7TRK5	1.6e-128	71.91	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BLA1	1.3e-127	72.24	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Carg25144 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67370.1	7.5e-91	59.19	Protein of unknown function (DUF1230)	[more]
AT5G11840.1	9.1e-12	32.99	Protein of unknown function (DUF1230)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009631	CGLD27-like	PFAM	PF06799	DUF1230	coord: 74..160 e-value: 9.0E-21 score: 74.5
IPR009631	CGLD27-like	PANTHER	PTHR34214	FAMILY NOT NAMED	coord: 225..353 coord: 1..163
None	No IPR available	PANTHER	PTHR34214:SF3	PROTEIN CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, CHLOROPLASTIC	coord: 225..353
None	No IPR available	PANTHER	PTHR34214:SF3	PROTEIN CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, CHLOROPLASTIC	coord: 1..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25144-RA	Carg25144-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009536	plastid