Carg25114 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg25114
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionFAS1 domain-containing protein SELMODRAFT_448915-like
LocationCarg_Chr13: 5381070 .. 5381516 (-)
RNA-Seq ExpressionCarg25114
SyntenyCarg25114
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCCAAACCTTAAACCACACGAATCTCCTAGCTGCCGTTGGAGACATGAGGGCCCAATCCTTCTATGGCTTTGCCATCCTTCTCCAAATGCTCAACGCCACCACCCAACTAACCCTAAGAGACATCACCTTCTTCATCCCCCTCGACCCTCAGCTCTCGAACATCTCCATACCGACCGACCGTCTCGAGTCGTTCGTCCTCAGTCATTCGATTGTCATGCCGCTGCAATTCAGTGACTTGATTCGATTTCCCACTGGTTCCATCGTTCCTTCGGGTTATCGTAATAGAATGATCAGAATCCATAACCATGGAAGAGGCCATTTTCTTGTCAATAATGCTGCTGTCACTGTTCCTAATGTTTGTTCTAGTTCCGAGGGTATTAAGTGTCATGGGATTGATAAGGTCCTTGATTATGGTAATGCTTACGATAATCATAATAATTAA

mRNA sequence

ATGTCCCAAACCTTAAACCACACGAATCTCCTAGCTGCCGTTGGAGACATGAGGGCCCAATCCTTCTATGGCTTTGCCATCCTTCTCCAAATGCTCAACGCCACCACCCAACTAACCCTAAGAGACATCACCTTCTTCATCCCCCTCGACCCTCAGCTCTCGAACATCTCCATACCGACCGACCGTCTCGAGTCGTTCGTCCTCAGTCATTCGATTGTCATGCCGCTGCAATTCAGTGACTTGATTCGATTTCCCACTGGTTCCATCGTTCCTTCGGGTTATCGTAATAGAATGATCAGAATCCATAACCATGGAAGAGGCCATTTTCTTGTCAATAATGCTGCTGTCACTGTTCCTAATGTTTGTTCTAGTTCCGAGGGTATTAAGTGTCATGGGATTGATAAGGTCCTTGATTATGGTAATGCTTACGATAATCATAATAATTAA

Coding sequence (CDS)

ATGTCCCAAACCTTAAACCACACGAATCTCCTAGCTGCCGTTGGAGACATGAGGGCCCAATCCTTCTATGGCTTTGCCATCCTTCTCCAAATGCTCAACGCCACCACCCAACTAACCCTAAGAGACATCACCTTCTTCATCCCCCTCGACCCTCAGCTCTCGAACATCTCCATACCGACCGACCGTCTCGAGTCGTTCGTCCTCAGTCATTCGATTGTCATGCCGCTGCAATTCAGTGACTTGATTCGATTTCCCACTGGTTCCATCGTTCCTTCGGGTTATCGTAATAGAATGATCAGAATCCATAACCATGGAAGAGGCCATTTTCTTGTCAATAATGCTGCTGTCACTGTTCCTAATGTTTGTTCTAGTTCCGAGGGTATTAAGTGTCATGGGATTGATAAGGTCCTTGATTATGGTAATGCTTACGATAATCATAATAATTAA

Protein sequence

MSQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPTDRLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPNVCSSSEGIKCHGIDKVLDYGNAYDNHNN
Homology
BLAST of Carg25114 vs. NCBI nr
Match: XP_022927494.1 (FAS1 domain-containing protein SELMODRAFT_448915-like [Cucurbita moschata] >KAG7019381.1 FAS1 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 299.3 bits (765), Expect = 1.9e-77
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0

Query: 1   MSQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPT 60
           MSQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPT
Sbjct: 1   MSQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPT 60

Query: 61  DRLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPN 120
           DRLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPN
Sbjct: 61  DRLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPN 120

Query: 121 VCSSSEGIKCHGIDKVLDYGNAYDNHNN 149
           VCSSSEGIKCHGIDKVLDYGNAYDNHNN
Sbjct: 121 VCSSSEGIKCHGIDKVLDYGNAYDNHNN 148

BLAST of Carg25114 vs. NCBI nr
Match: XP_023520235.1 (FAS1 domain-containing protein SELMODRAFT_448915-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295.4 bits (755), Expect = 2.7e-76
Identity = 146/148 (98.65%), Postives = 147/148 (99.32%), Query Frame = 0

Query: 1   MSQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPT 60
           MSQTLNHTNL+AAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISI T
Sbjct: 1   MSQTLNHTNLIAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIST 60

Query: 61  DRLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPN 120
           DRLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPN
Sbjct: 61  DRLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPN 120

Query: 121 VCSSSEGIKCHGIDKVLDYGNAYDNHNN 149
           VCSSSEGIKCHGIDKVLDYGNAYDNHNN
Sbjct: 121 VCSSSEGIKCHGIDKVLDYGNAYDNHNN 148

BLAST of Carg25114 vs. NCBI nr
Match: XP_023001077.1 (FAS1 domain-containing protein SELMODRAFT_448915-like [Cucurbita maxima])

HSP 1 Score: 291.6 bits (745), Expect = 3.9e-75
Identity = 143/147 (97.28%), Postives = 145/147 (98.64%), Query Frame = 0

Query: 1   MSQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPT 60
           MSQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPT
Sbjct: 26  MSQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPT 85

Query: 61  DRLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPN 120
           D LESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVT+PN
Sbjct: 86  DHLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTIPN 145

Query: 121 VCSSSEGIKCHGIDKVLDYGNAYDNHN 148
           VCSSS GIKCHGIDKV+DYGNAYDNHN
Sbjct: 146 VCSSSGGIKCHGIDKVIDYGNAYDNHN 172

BLAST of Carg25114 vs. NCBI nr
Match: KAG6583741.1 (Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 271.6 bits (693), Expect = 4.1e-69
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0

Query: 1   MSQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPT 60
           MSQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPT
Sbjct: 1   MSQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPT 60

Query: 61  DRLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPN 120
           DRLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPN
Sbjct: 61  DRLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPN 120

Query: 121 VCSSSEGIKCHGIDK 136
           VCSSSEGIKCHGIDK
Sbjct: 121 VCSSSEGIKCHGIDK 135

BLAST of Carg25114 vs. NCBI nr
Match: XP_038893487.1 (FAS1 domain-containing protein SELMODRAFT_448915-like [Benincasa hispida])

HSP 1 Score: 240.0 bits (611), Expect = 1.3e-59
Identity = 118/148 (79.73%), Postives = 132/148 (89.19%), Query Frame = 0

Query: 2   SQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPTD 61
           SQ  NHT+L AA+ DM+A+SFYGFAILLQMLN TTQLTL++ITFFIP DPQLSNISI  D
Sbjct: 29  SQPANHTDLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNISIAVD 88

Query: 62  RLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPNV 121
           RLE+FVLSH IVMPL+FSDLIRFPTGSIVPSGY NRMIRIHNHGRGHF+VNNA V VPNV
Sbjct: 89  RLEAFVLSHLIVMPLEFSDLIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNV 148

Query: 122 CSSSEGIKCHGIDKVLDYG-NAYDNHNN 149
           CSSSE IKCHG++KV+DYG ++Y N NN
Sbjct: 149 CSSSESIKCHGVNKVIDYGRDSYGNLNN 176

BLAST of Carg25114 vs. ExPASy Swiss-Prot
Match: P0DH64 (FAS1 domain-containing protein SELMODRAFT_448915 OS=Selaginella moellendorffii OX=88036 GN=SELMODRAFT_448915 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.0e-09
Identity = 39/131 (29.77%), Postives = 69/131 (52.67%), Query Frame = 0

Query: 14  VGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNI--SIPTDRLESFVLSHS 73
           V +M  Q F   A + Q L   T + +R  T  IP +  ++ +  ++  + + + +  H 
Sbjct: 76  VSNMIGQGFTVAAAVAQSLQ--TLIPIRS-TLLIPSNNAIAGVDANLSQEDIINTLQYHV 135

Query: 74  IVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPNVCSSSEGIKCH 133
           +  P  F  L R   G+ +P+  +  MI + ++  G+F +N   +T P+VCSS+  I CH
Sbjct: 136 LTFPTSFEALSRNDVGAELPTMLQGEMITVTSNSPGNFTLNEVNITHPDVCSSTRFIACH 195

Query: 134 GIDKVLDYGNA 143
           GID+VL Y ++
Sbjct: 196 GIDRVLAYNSS 203

BLAST of Carg25114 vs. ExPASy TrEMBL
Match: A0A6J1EI57 (FAS1 domain-containing protein SELMODRAFT_448915-like OS=Cucurbita moschata OX=3662 GN=LOC111434302 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 9.0e-78
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0

Query: 1   MSQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPT 60
           MSQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPT
Sbjct: 1   MSQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPT 60

Query: 61  DRLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPN 120
           DRLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPN
Sbjct: 61  DRLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPN 120

Query: 121 VCSSSEGIKCHGIDKVLDYGNAYDNHNN 149
           VCSSSEGIKCHGIDKVLDYGNAYDNHNN
Sbjct: 121 VCSSSEGIKCHGIDKVLDYGNAYDNHNN 148

BLAST of Carg25114 vs. ExPASy TrEMBL
Match: A0A6J1KFG1 (FAS1 domain-containing protein SELMODRAFT_448915-like OS=Cucurbita maxima OX=3661 GN=LOC111495332 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.9e-75
Identity = 143/147 (97.28%), Postives = 145/147 (98.64%), Query Frame = 0

Query: 1   MSQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPT 60
           MSQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPT
Sbjct: 26  MSQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPT 85

Query: 61  DRLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPN 120
           D LESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVT+PN
Sbjct: 86  DHLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTIPN 145

Query: 121 VCSSSEGIKCHGIDKVLDYGNAYDNHN 148
           VCSSS GIKCHGIDKV+DYGNAYDNHN
Sbjct: 146 VCSSSGGIKCHGIDKVIDYGNAYDNHN 172

BLAST of Carg25114 vs. ExPASy TrEMBL
Match: A0A1S3CJM9 (FAS1 domain-containing protein SELMODRAFT_448915-like OS=Cucumis melo OX=3656 GN=LOC103501717 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.5e-56
Identity = 115/148 (77.70%), Postives = 128/148 (86.49%), Query Frame = 0

Query: 2   SQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPTD 61
           SQT N T+L AA+ DM+AQSFYGFAILLQMLN TTQLTL++ITFFIP D QLSNISI  +
Sbjct: 23  SQTSNKTDLQAAIEDMKAQSFYGFAILLQMLNITTQLTLKEITFFIPQDSQLSNISIAVN 82

Query: 62  RLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPNV 121
            LE+FVLSH IVMPLQFSDLIRFPTGSIVPSGY NRMIRIHN+GRGHF+VNNA V VPNV
Sbjct: 83  HLEAFVLSHLIVMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNNGRGHFVVNNAVVNVPNV 142

Query: 122 CSSSEGIKCHGIDKVLDYGN-AYDNHNN 149
           CSSS GIKCHG++KV++YG   Y N NN
Sbjct: 143 CSSSLGIKCHGVNKVINYGGVTYGNLNN 170

BLAST of Carg25114 vs. ExPASy TrEMBL
Match: A0A6J1CM20 (uncharacterized protein LOC111012702 OS=Momordica charantia OX=3673 GN=LOC111012702 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.4e-51
Identity = 105/141 (74.47%), Postives = 119/141 (84.40%), Query Frame = 0

Query: 2   SQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPTD 61
           S   N T+L AA+ DMRA+SFYGFAILLQMLNATTQL LRDITFFIP D QLSNISI   
Sbjct: 28  SSNPNRTDLEAAIEDMRAKSFYGFAILLQMLNATTQLALRDITFFIPRDAQLSNISIAVG 87

Query: 62  RLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPNV 121
           RLE+FV SH I MPLQFSDLIRFPTGS+VPSG  NRMIR+HNHGR HFLVNNA VTVPNV
Sbjct: 88  RLEAFVFSHFIAMPLQFSDLIRFPTGSMVPSGVHNRMIRVHNHGRAHFLVNNAEVTVPNV 147

Query: 122 CSSSEGIKCHGIDKVLDYGNA 143
           C ++  +KCHG+++V+DYG+A
Sbjct: 148 C-ATHTVKCHGVNRVIDYGHA 167

BLAST of Carg25114 vs. ExPASy TrEMBL
Match: A0A0A0LTE3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181455 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.2e-45
Identity = 94/119 (78.99%), Postives = 106/119 (89.08%), Query Frame = 0

Query: 31  MLNATTQLTLRDITFFIPLDPQLSNISIPTDRLESFVLSHSIVMPLQFSDLIRFPTGSIV 90
           MLN TTQLTL++ITFFIP DPQ+SNISI  DRLE+FVLSH I+MPLQFSDLIRFPTGSIV
Sbjct: 1   MLNITTQLTLKEITFFIPQDPQISNISIAVDRLEAFVLSHMILMPLQFSDLIRFPTGSIV 60

Query: 91  PSGYRNRMIRIHNHGRGHFLVNNAAVTVPNVCSSSEGIKCHGIDKVLDYGNA-YDNHNN 149
           PSGY NRMIRIHN+GRGHF+VNNA V VPNVCSSS GIKCHG++KV++YG A Y N +N
Sbjct: 61  PSGYHNRMIRIHNNGRGHFVVNNAVVNVPNVCSSSLGIKCHGVNKVINYGRATYGNLSN 119

BLAST of Carg25114 vs. TAIR 10
Match: AT5G26730.1 (Fasciclin-like arabinogalactan family protein )

HSP 1 Score: 111.7 bits (278), Expect = 5.1e-25
Identity = 56/138 (40.58%), Postives = 80/138 (57.97%), Query Frame = 0

Query: 6   NHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPTDRLES 65
           N T+L++A+ DMR QS+ GF ILL+ LN T      DITF +P D  +S+  I  + LE+
Sbjct: 114 NQTDLISAMTDMRRQSYNGFVILLRFLNDTNYFRNTDITFLMPSDNDISHADITPESLET 173

Query: 66  FVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPNVCSSS 125
           F+L H+I   L  + ++ FP  ++VP  + +RM  I   G     VNNA +  PNVC +S
Sbjct: 174 FILKHTIPAWLMINHMLHFPNRTLVPCSFSDRMFTITKSGGSGIYVNNARIVTPNVCQNS 233

Query: 126 EGIKCHGIDKVLDYGNAY 144
             I CHGI  V+ +   Y
Sbjct: 234 R-ISCHGISDVISFNQNY 250

BLAST of Carg25114 vs. TAIR 10
Match: AT5G16920.1 (Fasciclin-like arabinogalactan family protein )

HSP 1 Score: 88.6 bits (218), Expect = 4.6e-18
Identity = 51/142 (35.92%), Postives = 75/142 (52.82%), Query Frame = 0

Query: 6   NHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQL--SNISIPTDRL 65
           N+  L  A+ +M   +++ F +L+ ML +     L ++TF +P D  L  SNI    D +
Sbjct: 32  NNHELSIAIEEMEKANYFSFVMLINMLPSVNPRFLANVTFLMPKDKTLSTSNIINQQDSV 91

Query: 66  ESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPNVCS 125
             F+L HSI   L F  L   P GSIVPS   +  + I N GR ++ +NN  +   N+CS
Sbjct: 92  TEFLLRHSIPSSLLFEHLNLIPNGSIVPSSLPHYTLEISNGGRSNYFLNNVKIISRNICS 151

Query: 126 SSEGIKCHGIDKVLDYGNAYDN 146
               IKCHGID +L   +  D+
Sbjct: 152 LG-SIKCHGIDGILQSPSTVDD 172

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022927494.11.9e-77100.00FAS1 domain-containing protein SELMODRAFT_448915-like [Cucurbita moschata] >KAG7... [more]
XP_023520235.12.7e-7698.65FAS1 domain-containing protein SELMODRAFT_448915-like [Cucurbita pepo subsp. pep... [more]
XP_023001077.13.9e-7597.28FAS1 domain-containing protein SELMODRAFT_448915-like [Cucurbita maxima][more]
KAG6583741.14.1e-69100.00Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp... [more]
XP_038893487.11.3e-5979.73FAS1 domain-containing protein SELMODRAFT_448915-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
P0DH645.0e-0929.77FAS1 domain-containing protein SELMODRAFT_448915 OS=Selaginella moellendorffii O... [more]
Match NameE-valueIdentityDescription
A0A6J1EI579.0e-78100.00FAS1 domain-containing protein SELMODRAFT_448915-like OS=Cucurbita moschata OX=3... [more]
A0A6J1KFG11.9e-7597.28FAS1 domain-containing protein SELMODRAFT_448915-like OS=Cucurbita maxima OX=366... [more]
A0A1S3CJM92.5e-5677.70FAS1 domain-containing protein SELMODRAFT_448915-like OS=Cucumis melo OX=3656 GN... [more]
A0A6J1CM201.4e-5174.47uncharacterized protein LOC111012702 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
A0A0A0LTE31.2e-4578.99Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181455 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G26730.15.1e-2540.58Fasciclin-like arabinogalactan family protein [more]
AT5G16920.14.6e-1835.92Fasciclin-like arabinogalactan family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000782FAS1 domainSMARTSM00554fasc_3coord: 44..140
e-value: 3.0E-5
score: 33.5
IPR000782FAS1 domainPROSITEPS50213FAS1coord: 1..137
score: 8.36237
IPR036378FAS1 domain superfamilyGENE3D2.30.180.10FAS1 domaincoord: 2..138
e-value: 2.7E-5
score: 26.4
IPR036378FAS1 domain superfamilySUPERFAMILY82153FAS1 domaincoord: 22..137
NoneNo IPR availablePANTHERPTHR36069:SF3ARABINOGALACTAN FAMILY PROTEIN, PUTATIVE-RELATEDcoord: 3..145
NoneNo IPR availablePANTHERPTHR36069EXPRESSED PROTEIN-RELATEDcoord: 3..145

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25114-RACarg25114-RAmRNA