Carg25114 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCCAAACCTTAAACCACACGAATCTCCTAGCTGCCGTTGGAGACATGAGGGCCCAATCCTTCTATGGCTTTGCCATCCTTCTCCAAATGCTCAACGCCACCACCCAACTAACCCTAAGAGACATCACCTTCTTCATCCCCCTCGACCCTCAGCTCTCGAACATCTCCATACCGACCGACCGTCTCGAGTCGTTCGTCCTCAGTCATTCGATTGTCATGCCGCTGCAATTCAGTGACTTGATTCGATTTCCCACTGGTTCCATCGTTCCTTCGGGTTATCGTAATAGAATGATCAGAATCCATAACCATGGAAGAGGCCATTTTCTTGTCAATAATGCTGCTGTCACTGTTCCTAATGTTTGTTCTAGTTCCGAGGGTATTAAGTGTCATGGGATTGATAAGGTCCTTGATTATGGTAATGCTTACGATAATCATAATAATTAA ATGTCCCAAACCTTAAACCACACGAATCTCCTAGCTGCCGTTGGAGACATGAGGGCCCAATCCTTCTATGGCTTTGCCATCCTTCTCCAAATGCTCAACGCCACCACCCAACTAACCCTAAGAGACATCACCTTCTTCATCCCCCTCGACCCTCAGCTCTCGAACATCTCCATACCGACCGACCGTCTCGAGTCGTTCGTCCTCAGTCATTCGATTGTCATGCCGCTGCAATTCAGTGACTTGATTCGATTTCCCACTGGTTCCATCGTTCCTTCGGGTTATCGTAATAGAATGATCAGAATCCATAACCATGGAAGAGGCCATTTTCTTGTCAATAATGCTGCTGTCACTGTTCCTAATGTTTGTTCTAGTTCCGAGGGTATTAAGTGTCATGGGATTGATAAGGTCCTTGATTATGGTAATGCTTACGATAATCATAATAATTAA ATGTCCCAAACCTTAAACCACACGAATCTCCTAGCTGCCGTTGGAGACATGAGGGCCCAATCCTTCTATGGCTTTGCCATCCTTCTCCAAATGCTCAACGCCACCACCCAACTAACCCTAAGAGACATCACCTTCTTCATCCCCCTCGACCCTCAGCTCTCGAACATCTCCATACCGACCGACCGTCTCGAGTCGTTCGTCCTCAGTCATTCGATTGTCATGCCGCTGCAATTCAGTGACTTGATTCGATTTCCCACTGGTTCCATCGTTCCTTCGGGTTATCGTAATAGAATGATCAGAATCCATAACCATGGAAGAGGCCATTTTCTTGTCAATAATGCTGCTGTCACTGTTCCTAATGTTTGTTCTAGTTCCGAGGGTATTAAGTGTCATGGGATTGATAAGGTCCTTGATTATGGTAATGCTTACGATAATCATAATAATTAA MSQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPTDRLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPNVCSSSEGIKCHGIDKVLDYGNAYDNHNN Homology
BLAST of Carg25114 vs. NCBI nr
Match: XP_022927494.1 (FAS1 domain-containing protein SELMODRAFT_448915-like [Cucurbita moschata] >KAG7019381.1 FAS1 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 299.3 bits (765), Expect = 1.9e-77 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Carg25114 vs. NCBI nr
Match: XP_023520235.1 (FAS1 domain-containing protein SELMODRAFT_448915-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 295.4 bits (755), Expect = 2.7e-76 Identity = 146/148 (98.65%), Postives = 147/148 (99.32%), Query Frame = 0
BLAST of Carg25114 vs. NCBI nr
Match: XP_023001077.1 (FAS1 domain-containing protein SELMODRAFT_448915-like [Cucurbita maxima]) HSP 1 Score: 291.6 bits (745), Expect = 3.9e-75 Identity = 143/147 (97.28%), Postives = 145/147 (98.64%), Query Frame = 0
BLAST of Carg25114 vs. NCBI nr
Match: KAG6583741.1 (Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 271.6 bits (693), Expect = 4.1e-69 Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0
BLAST of Carg25114 vs. NCBI nr
Match: XP_038893487.1 (FAS1 domain-containing protein SELMODRAFT_448915-like [Benincasa hispida]) HSP 1 Score: 240.0 bits (611), Expect = 1.3e-59 Identity = 118/148 (79.73%), Postives = 132/148 (89.19%), Query Frame = 0
BLAST of Carg25114 vs. ExPASy Swiss-Prot
Match: P0DH64 (FAS1 domain-containing protein SELMODRAFT_448915 OS=Selaginella moellendorffii OX=88036 GN=SELMODRAFT_448915 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 5.0e-09 Identity = 39/131 (29.77%), Postives = 69/131 (52.67%), Query Frame = 0
BLAST of Carg25114 vs. ExPASy TrEMBL
Match: A0A6J1EI57 (FAS1 domain-containing protein SELMODRAFT_448915-like OS=Cucurbita moschata OX=3662 GN=LOC111434302 PE=3 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 9.0e-78 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Carg25114 vs. ExPASy TrEMBL
Match: A0A6J1KFG1 (FAS1 domain-containing protein SELMODRAFT_448915-like OS=Cucurbita maxima OX=3661 GN=LOC111495332 PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 1.9e-75 Identity = 143/147 (97.28%), Postives = 145/147 (98.64%), Query Frame = 0
BLAST of Carg25114 vs. ExPASy TrEMBL
Match: A0A1S3CJM9 (FAS1 domain-containing protein SELMODRAFT_448915-like OS=Cucumis melo OX=3656 GN=LOC103501717 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 2.5e-56 Identity = 115/148 (77.70%), Postives = 128/148 (86.49%), Query Frame = 0
BLAST of Carg25114 vs. ExPASy TrEMBL
Match: A0A6J1CM20 (uncharacterized protein LOC111012702 OS=Momordica charantia OX=3673 GN=LOC111012702 PE=3 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 1.4e-51 Identity = 105/141 (74.47%), Postives = 119/141 (84.40%), Query Frame = 0
BLAST of Carg25114 vs. ExPASy TrEMBL
Match: A0A0A0LTE3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181455 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 1.2e-45 Identity = 94/119 (78.99%), Postives = 106/119 (89.08%), Query Frame = 0
BLAST of Carg25114 vs. TAIR 10
Match: AT5G26730.1 (Fasciclin-like arabinogalactan family protein ) HSP 1 Score: 111.7 bits (278), Expect = 5.1e-25 Identity = 56/138 (40.58%), Postives = 80/138 (57.97%), Query Frame = 0
BLAST of Carg25114 vs. TAIR 10
Match: AT5G16920.1 (Fasciclin-like arabinogalactan family protein ) HSP 1 Score: 88.6 bits (218), Expect = 4.6e-18 Identity = 51/142 (35.92%), Postives = 75/142 (52.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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