Carg25109 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg25109
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr13: 5359057 .. 5359373 (-)
RNA-Seq ExpressionCarg25109
SyntenyCarg25109
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAGGGAGCCTTAGCTACTAAGCTTTGGTGTTTATTTTCTGCATGTTCCATTGCAAGATCTTGCCTGTCTCCTTCTTCTCTGTGCGACTTGTTCCGTCTTCAACCTCTGCCCCTTTTTTCTCGAAGGCAACGTTCTTCGGGACTCAATCCAGCAGAGCTTGGAATTCGGTAAGCATTCCAGATCTCGTTTCTATACTCTCTCTTCCAATTCTGCGTCGGCTTACATTTTCTCATTAGTCTCTTGCCGTAATTTAAACAGCAGAATTTGGAATCTGCTATTGAATCACAGGCTCACGGATTCTCTATTCCACGCTGA

mRNA sequence

CAAAGGGAGCCTTAGCTACTAAGCTTTGGTGTTTATTTTCTGCATGTTCCATTGCAAGATCTTGCCTGTCTCCTTCTTCTCTGTGCGACTTGTTCCGTCTTCAACCTCTGCCCCTTTTTTCTCGAAGGCAACGTTCTTCGGGACTCAATCCAGCAGAGCTTGGAATTCGCAGAATTTGGAATCTGCTATTGAATCACAGGCTCACGGATTCTCTATTCCACGCTGA

Coding sequence (CDS)

ATGTTCCATTGCAAGATCTTGCCTGTCTCCTTCTTCTCTGTGCGACTTGTTCCGTCTTCAACCTCTGCCCCTTTTTTCTCGAAGGCAACGTTCTTCGGGACTCAATCCAGCAGAGCTTGGAATTCGCAGAATTTGGAATCTGCTATTGAATCACAGGCTCACGGATTCTCTATTCCACGCTGA

Protein sequence

MFHCKILPVSFFSVRLVPSSTSAPFFSKATFFGTQSSRAWNSQNLESAIESQAHGFSIPR
Homology
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BLAST of Carg25109 vs. NCBI nr
Match: KAG7019376.1 (hypothetical protein SDJN02_18337 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 120.9 bits (302), Expect = 3.7e-24
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  MFHCKILPVSFFSVRLVPSSTSAPFFSKATFFGTQSSRAWNSQNLESAIESQAHGFSIPR 60
          MFHCKILPVSFFSVRLVPSSTSAPFFSKATFFGTQSSRAWNSQNLESAIESQAHGFSIPR
Sbjct: 1  MFHCKILPVSFFSVRLVPSSTSAPFFSKATFFGTQSSRAWNSQNLESAIESQAHGFSIPR 60

The following BLAST results are available for this feature:
BLAST of Carg25109 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7019376.13.7e-24100.00hypothetical protein SDJN02_18337 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Carg25109 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg25109 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg25109 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25109-RACarg25109-RAmRNA