Carg25082 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25082
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	IIIB transcription factor
Location	Carg_Chr19: 4347453 .. 4349869 (-)
RNA-Seq Expression	Carg25082
Synteny	Carg25082

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGCGAAATTCAGTTTGTAAATGGGTTGTGAATTTCCCTTCGATTTGACCCACCTGAGTTACAGATCGGATCCTACTTGAGTTTGCAGGGAGGGATTTGGATGGACAAGGTTTTAGAGTTTGGACGAAGAGCCCTCTTCTACGTTAGGGTCCTCTCCGGCTATGAACAGCGCCGGATTCGATCCTTTAGGTTGGAGATCCAAAAGCGTCTCAAACAGGTACTTGGTGTTGGATCTTTCCATTTTGCTTCTGTTTTCTTCTGATTATGCAGTTTATATTCCTCATTGGGGTTTTTGAAATGATGGAGTTGGTTATCATCTACACTGAAATTAGAACCCAATGAGGGAAAATGCACAGTTCTCTGCCATTTTGTGCTGGGAAATGAGAAATAATTCCTGTTTGAACCACTTTCAATTTGAATGATTGAGGAACAGAGATGAGTGAAATGTAGTCAGCTGTTCTTCAGCTGTGAAAACTGCATTTAGTAAATGTATATTGAATCCTTAACATGACCTTTTGGTAGAAAATATAATTCCTAGCGATTAGCTATATATGGTGTTCTTCTCTTGTTTGAATCAACCAAACTTCTCCTCAGGAGGATAGATGAACCAGGGTTTGAAACCAAACTTCTCCTTAGGAGGAGTATAGATGGGTCGATTTAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCTGAGCGCTTCGGGGACCACCTCATCTCTTTTCTTCTTGAGAATCCATACATCCCTTATCAGTATCTTCTTAACTTGGTTCGATCAATATATTTCTCAAGGTTACTTTCTTGGTCATTGGGTTAACTTGTCCTGTCTTTATAGTGAAGTTACGAATATGAGTTTCTTTCTAAATGCAACTTCATTATCATTACCCACTTAAAAATGAATCAGCCATCCATTTGGAAGTAATGGTTTCCTACTTTGCTTGGTATTTCCTTTTCTTCATCCTTCTTTTGTTGACAAATTACTTTGGTGTTGACAACTTAAGTTGTATGGTTTGGATCAAAAAGGCGAGATGGATTGAGTTCGGTTTCTTGGAATCTTATGGAGGAGCTCTAAAACCATTTGAAGATTGCTGCTGAGTTATTCAAACCTTCATTTTGATCAGAATTTCATCGTCATTATGTGGATATTTAAGTGTTCATGTGTAAGGGGCTATGTTTATGTGTGTTTAAAACTTTCTAACTTGTTTGCGAACAAGCTTTATATGTTGTAATGGTGTTTTACCCTTTGCCAGGCGGAGGAAAGAAAAGTTGCCATAAGAAAGGTACCAGAACAGGCTATCTTAGGAGAAGTTCGTCGCATGGTTGAGGAGATGCAAACTCTAAATAAAAAGTTAGAGGAAACAGTAAGATACTCATTTTTCTTTAGGATGGATTTCATATTAGAAACGTTTCTTCTCCGATTTTCAGCTCCCGGGGAAAATCATGTCGTTGTTTTTATAAGAAAACCATAACAAGATTAGCACGAACACACTAAAGAATGTTTTGTTCCCTTATCCAATCGATGTAGGATTTCACAATCCACCCCCTTCGGGGCCAGCATCCTCGTTGGTACTCGTTTCTCTCTCCAATCGATGTGAGACCCCAATCCATCCTCCTTTAGGGCCTAGCATCCTTGTTGCACACCGCATGGTGTCCATCCCCCTTTGGGGTTCAGCTTCCTCGCTAACACATCGCTCGGTGTCTGGCTCTGATACCATTTATAACAGCCCAAGCCCACCGCTAGCAAATGTTGTCCTCTTTGGGCTTTCGTTTCAAGTTTTCCCTCAATGTTTTTAAAACGCGTCTGTTAGAGAGAGGTTTCCACACCCTTATAAAGAATGTTCCGTTCATCTCTCCAATCGATGTGCAATAGTATGGTCCTAATATTTCTCGTCACACAAAGGCACACACAAAAAGAAGGAACTGACACATATACAAGAAAAGAAATGCAGATCGGGAGATCGACCTTTACTTTCTATAAGACATGGGGATTAATGCATTCAACTGAATTAGCATACTCAAGTTATTTCTAGTTTCGATTAGTTAATAATGCTATGCGTTACCGTTTTATGAGCACGAAAGTTAGTAGTACATCCAGTAGTGATGTGGGATAGAATTTATCATTGGGAGGGTTGTTAATGGGCAGCCTAAACATGGGAAGATGAGTATACGAGAGGTGTCACAGATGGGGCCCTCGAGAGGCACAATCATCTTATTATCTATGACAGAACTTTGTACAATGCAGGAGTCTGCCATTGAAGAATACTTCAAGCCAATTGACAAAGAAGCAGAGACATTAATGAAAGTACAACTGGAAGGAGAAGAGAGAAGTATGAAGAACATGGTTAAAGTGATGCAGCAGCAGTTGTTTGAAAAAGCTGAGGCAGGTAAATTTACCAATACCCTT

mRNA sequence

TTTGCGAAATTCAGTTTGTAAATGGGTTGTGAATTTCCCTTCGATTTGACCCACCTGAGTTACAGATCGGATCCTACTTGAGTTTGCAGGGAGGGATTTGGATGGACAAGGTTTTAGAGTTTGGACGAAGAGCCCTCTTCTACGTTAGGGTCCTCTCCGGCTATGAACAGCGCCGGATTCGATCCTTTAGGTTGGAGATCCAAAAGCGTCTCAAACAGGCGGAGGAAAGAAAAGTTGCCATAAGAAAGGTACCAGAACAGGCTATCTTAGGAGAAGTTCGTCGCATGGTTGAGGAGATGCAAACTCTAAATAAAAAGTTAGAGGAAACAGAGTCTGCCATTGAAGAATACTTCAAGCCAATTGACAAAGAAGCAGAGACATTAATGAAAGTACAACTGGAAGGAGAAGAGAGAAGTATGAAGAACATGGTTAAAGTGATGCAGCAGCAGTTGTTTGAAAAAGCTGAGGCAGGTAAATTTACCAATACCCTT

Coding sequence (CDS)

ATGGACAAGGTTTTAGAGTTTGGACGAAGAGCCCTCTTCTACGTTAGGGTCCTCTCCGGCTATGAACAGCGCCGGATTCGATCCTTTAGGTTGGAGATCCAAAAGCGTCTCAAACAGGCGGAGGAAAGAAAAGTTGCCATAAGAAAGGTACCAGAACAGGCTATCTTAGGAGAAGTTCGTCGCATGGTTGAGGAGATGCAAACTCTAAATAAAAAGTTAGAGGAAACAGAGTCTGCCATTGAAGAATACTTCAAGCCAATTGACAAAGAAGCAGAGACATTAATGAAAGTACAACTGGAAGGAGAAGAGAGAAGTATGAAGAACATGGTTAAAGTGATGCAGCAGCAGTTGTTTGAAAAAGCTGAGGCAGGTAAATTTACCAATACCCTT

Protein sequence

MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQLFEKAEAGKFTNTL

Homology

[Close]

BLAST of Carg25082 vs. NCBI nr
Match: KAG7011487.1 (hypothetical protein SDJN02_26393, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 236.9 bits (603), Expect = 9.9e-59
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQLFEK 120
           RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQLFEK
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQLFEK 120

Query: 121 AEAGKFTNTL 131
           AEAGKFTNTL
Sbjct: 121 AEAGKFTNTL 130

[Close]

BLAST of Carg25082 vs. NCBI nr
Match: XP_038886906.1 (uncharacterized protein LOC120077104 [Benincasa hispida] >XP_038886907.1 uncharacterized protein LOC120077104 [Benincasa hispida])

HSP 1 Score: 216.1 bits (549), Expect = 1.8e-52
Identity = 118/131 (90.08%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           MDK+LEFGRRALFYVRVLSGYE+RRIRSFRLE++KRLKQAEERK AIRK+PEQAILGEVR
Sbjct: 1   MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQ-LFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPIDKEAE LMK+QLEGEER+MK+MVKVMQQQ LFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLEGEERTMKDMVKVMQQQALFE 120

Query: 121 KAEAGKFTNTL 131
           KAEAGK T+TL
Sbjct: 121 KAEAGKVTSTL 131

[Close]

BLAST of Carg25082 vs. NCBI nr
Match: XP_022971856.1 (uncharacterized protein LOC111470545 isoform X6 [Cucurbita maxima])

HSP 1 Score: 212.6 bits (540), Expect = 2.0e-51
Identity = 119/126 (94.44%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERK  IRKVPEQAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQ-LFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPIDKEAE LMKVQLEGEER+MKNMVKVMQQQ LFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120

Query: 121 KAEAGK 126
            AEAG+
Sbjct: 121 NAEAGR 126

[Close]

BLAST of Carg25082 vs. NCBI nr
Match: XP_022931799.1 (uncharacterized protein LOC111438069 isoform X2 [Cucurbita moschata])

HSP 1 Score: 212.6 bits (540), Expect = 2.0e-51
Identity = 120/126 (95.24%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVP+QAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQ-QQLFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPI KEAE LMKVQLEGEERSMKNMVKVMQ Q LFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE 120

Query: 121 KAEAGK 126
           KAEAG+
Sbjct: 121 KAEAGR 126

[Close]

BLAST of Carg25082 vs. NCBI nr
Match: XP_022971855.1 (uncharacterized protein LOC111470545 isoform X5 [Cucurbita maxima])

HSP 1 Score: 212.2 bits (539), Expect = 2.6e-51
Identity = 119/125 (95.20%), Postives = 120/125 (96.00%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERK  IRKVPEQAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQ-LFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPIDKEAE LMKVQLEGEER+MKNMVKVMQQQ LFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120

Query: 121 KAEAG 125
            AEAG
Sbjct: 121 NAEAG 125

[Close]

BLAST of Carg25082 vs. ExPASy TrEMBL
Match: A0A6J1I4C9 (uncharacterized protein LOC111470545 isoform X6 OS=Cucurbita maxima OX=3661 GN=LOC111470545 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 9.7e-52
Identity = 119/126 (94.44%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERK  IRKVPEQAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQ-LFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPIDKEAE LMKVQLEGEER+MKNMVKVMQQQ LFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120

Query: 121 KAEAGK 126
            AEAG+
Sbjct: 121 NAEAGR 126

[Close]

BLAST of Carg25082 vs. ExPASy TrEMBL
Match: A0A6J1EV87 (uncharacterized protein LOC111438069 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111438069 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 9.7e-52
Identity = 120/126 (95.24%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVP+QAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQ-QQLFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPI KEAE LMKVQLEGEERSMKNMVKVMQ Q LFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE 120

Query: 121 KAEAGK 126
           KAEAG+
Sbjct: 121 KAEAGR 126

[Close]

BLAST of Carg25082 vs. ExPASy TrEMBL
Match: A0A6J1I6W6 (uncharacterized protein LOC111470545 isoform X5 OS=Cucurbita maxima OX=3661 GN=LOC111470545 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.3e-51
Identity = 119/125 (95.20%), Postives = 120/125 (96.00%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERK  IRKVPEQAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQ-LFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPIDKEAE LMKVQLEGEER+MKNMVKVMQQQ LFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120

Query: 121 KAEAG 125
            AEAG
Sbjct: 121 NAEAG 125

[Close]

BLAST of Carg25082 vs. ExPASy TrEMBL
Match: A0A6J1I338 (uncharacterized protein LOC111470545 isoform X7 OS=Cucurbita maxima OX=3661 GN=LOC111470545 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 8.2e-51
Identity = 118/124 (95.16%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERK  IRKVPEQAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQ-LFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPIDKEAE LMKVQLEGEER+MKNMVKVMQQQ LFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120

Query: 121 KAEA 124
            AEA
Sbjct: 121 NAEA 124

[Close]

BLAST of Carg25082 vs. ExPASy TrEMBL
Match: A0A6J1BQI2 (uncharacterized protein LOC111004517 OS=Momordica charantia OX=3673 GN=LOC111004517 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.1e-50
Identity = 114/130 (87.69%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           MDK+LEFGRRALFYVRVLSGYE+RRIRSFRLE++KRLKQAEE+K A+RK+PEQAILGEVR
Sbjct: 1   MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQ-LFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPIDKEAE LMK+QLEGEER MK+MVKVMQQQ LFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLEGEERKMKDMVKVMQQQALFE 120

Query: 121 KAEAGKFTNT 130
           KAEAGK T +
Sbjct: 121 KAEAGKVTTS 130

[Close]

BLAST of Carg25082 vs. TAIR 10
Match: AT4G17010.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 151.0 bits (380), Expect = 6.7e-37
Identity = 75/122 (61.48%), Postives = 103/122 (84.43%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           M+K+LE+GR+A+FYVRVLSGYE+RRIRS+RL+++KR++QA +RKV I ++PEQ +L EVR
Sbjct: 1   MNKLLEYGRKAMFYVRVLSGYEERRIRSYRLQLEKRIQQANQRKVEINRLPEQIVLSEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQLFEK 120
           RMVEEMQ LNK++E TE+ IE+YFKPIDK A T+M++QLEGE+++M  M+   QQ+   K
Sbjct: 61  RMVEEMQNLNKQIENTEAQIEDYFKPIDKHASTIMEIQLEGEKKTMGTMMNATQQEAIRK 120

Query: 121 AE 123
            E
Sbjct: 121 IE 122

The following BLAST results are available for this feature:

BLAST of Carg25082 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7011487.1	9.9e-59	100.00	hypothetical protein SDJN02_26393, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038886906.1	1.8e-52	90.08	uncharacterized protein LOC120077104 [Benincasa hispida] >XP_038886907.1 unchara...	[more]
XP_022971856.1	2.0e-51	94.44	uncharacterized protein LOC111470545 isoform X6 [Cucurbita maxima]	[more]
XP_022931799.1	2.0e-51	95.24	uncharacterized protein LOC111438069 isoform X2 [Cucurbita moschata]	[more]
XP_022971855.1	2.6e-51	95.20	uncharacterized protein LOC111470545 isoform X5 [Cucurbita maxima]	[more]

BLAST of Carg25082 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg25082 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I4C9	9.7e-52	94.44	uncharacterized protein LOC111470545 isoform X6 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EV87	9.7e-52	95.24	uncharacterized protein LOC111438069 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1I6W6	1.3e-51	95.20	uncharacterized protein LOC111470545 isoform X5 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1I338	8.2e-51	95.16	uncharacterized protein LOC111470545 isoform X7 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1BQI2	1.1e-50	87.69	uncharacterized protein LOC111004517 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]

BLAST of Carg25082 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17010.1	6.7e-37	61.48	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 30..50
None	No IPR available	COILS	Coil	Coil	coord: 56..79
None	No IPR available	PANTHER	PTHR35749:SF3	SUBFAMILY NOT NAMED	coord: 1..126
None	No IPR available	PANTHER	PTHR35749	OSJNBA0084A10.10 PROTEIN	coord: 1..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25082-RA	Carg25082-RA	mRNA