Carg24854 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24854
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	zinc finger protein ZAT9-like
Location	Carg_Chr16: 9198634 .. 9199317 (+)
RNA-Seq Expression	Carg24854
Synteny	Carg24854

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGAGCCATAAATGCAAGCTCTGCTCTCGAAGCTTCGTCAATGGCAGAGCATTAGGCGGCCATATGAAAGCCCATTTAGCCACTTTCTCCATTGAACATGAAAATCCCATCAAAACCCTCAGATCACCAGATCCAGAAATGCTCTGGATCTCCACCGCCCAAGACAGAGAGAGCGAAACCGAGTCAAAGAATCCAACTCGGCGGCGCTCTAAACGAACTCGGAGATTCAAGTCCGAGTCACCGCCGTCGTCGGAGCCTGCGAGTTCCATCTCCGACACCTCGCCGGAGGAAGACGTCGCCATCTGTCTCGTAATGCTCTCGATGGAACAGGGGAAGGAACAGAGTCGGACGCCGGTGACGGTGGGGAAAAGTTTCCGATGTGGGAAATGCCGGAAATCTTTCCGATCGAACAGGGCACTGTTTGGGCACAGAAAAGTTTGCAGAAATGAAGGGGAAGAAGATGGGATTAATGGAGGTGAGTGGAAGATCTTTAAATGTTGTTATTGTTGTAAAGTGTTTGGGTCTGGACAAGCTTTAGGTGGACATAAAAGATCCCATTTACAGGGTTCGATCAGAGCCGCCATTGATGGGAGTTCTAGGAAGCTTGAGATCGGTTTGGATCTCAATTTGCCAGCTCCACTGGAAGAAGATGATTACAGTGTAGTTTCTTTTGTATGA

mRNA sequence

ATGGCGGAGAGCCATAAATGCAAGCTCTGCTCTCGAAGCTTCGTCAATGGCAGAGCATTAGGCGGCCATATGAAAGCCCATTTAGCCACTTTCTCCATTGAACATGAAAATCCCATCAAAACCCTCAGATCACCAGATCCAGAAATGCTCTGGATCTCCACCGCCCAAGACAGAGAGAGCGAAACCGAGTCAAAGAATCCAACTCGGCGGCGCTCTAAACGAACTCGGAGATTCAAGTCCGAGTCACCGCCGTCGTCGGAGCCTGCGAGTTCCATCTCCGACACCTCGCCGGAGGAAGACGTCGCCATCTGTCTCGTAATGCTCTCGATGGAACAGGGGAAGGAACAGAGTCGGACGCCGGTGACGGTGGGGAAAAGTTTCCGATGTGGGAAATGCCGGAAATCTTTCCGATCGAACAGGGCACTGTTTGGGCACAGAAAAGTTTGCAGAAATGAAGGGGAAGAAGATGGGATTAATGGAGGTGAGTGGAAGATCTTTAAATGTTGTTATTGTTGTAAAGTGTTTGGGTCTGGACAAGCTTTAGGTGGACATAAAAGATCCCATTTACAGGGTTCGATCAGAGCCGCCATTGATGGGAGTTCTAGGAAGCTTGAGATCGGTTTGGATCTCAATTTGCCAGCTCCACTGGAAGAAGATGATTACAGTGTAGTTTCTTTTGTATGA

Coding sequence (CDS)

ATGGCGGAGAGCCATAAATGCAAGCTCTGCTCTCGAAGCTTCGTCAATGGCAGAGCATTAGGCGGCCATATGAAAGCCCATTTAGCCACTTTCTCCATTGAACATGAAAATCCCATCAAAACCCTCAGATCACCAGATCCAGAAATGCTCTGGATCTCCACCGCCCAAGACAGAGAGAGCGAAACCGAGTCAAAGAATCCAACTCGGCGGCGCTCTAAACGAACTCGGAGATTCAAGTCCGAGTCACCGCCGTCGTCGGAGCCTGCGAGTTCCATCTCCGACACCTCGCCGGAGGAAGACGTCGCCATCTGTCTCGTAATGCTCTCGATGGAACAGGGGAAGGAACAGAGTCGGACGCCGGTGACGGTGGGGAAAAGTTTCCGATGTGGGAAATGCCGGAAATCTTTCCGATCGAACAGGGCACTGTTTGGGCACAGAAAAGTTTGCAGAAATGAAGGGGAAGAAGATGGGATTAATGGAGGTGAGTGGAAGATCTTTAAATGTTGTTATTGTTGTAAAGTGTTTGGGTCTGGACAAGCTTTAGGTGGACATAAAAGATCCCATTTACAGGGTTCGATCAGAGCCGCCATTGATGGGAGTTCTAGGAAGCTTGAGATCGGTTTGGATCTCAATTTGCCAGCTCCACTGGAAGAAGATGATTACAGTGTAGTTTCTTTTGTATGA

Protein sequence

MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTAQDRESETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTPVTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQALGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV

Homology

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BLAST of Carg24854 vs. NCBI nr
Match: KAG7015720.1 (Zinc finger protein ZAT9, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 458.4 bits (1178), Expect = 3.7e-125
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTAQDRES 60
           MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTAQDRES
Sbjct: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTAQDRES 60

Query: 61  ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 120
           ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP
Sbjct: 61  ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 120

Query: 121 VTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQA 180
           VTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQA
Sbjct: 121 VTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQA 180

Query: 181 LGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV 228
           LGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV
Sbjct: 181 LGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV 227

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BLAST of Carg24854 vs. NCBI nr
Match: XP_022923480.1 (zinc finger protein ZAT9-like [Cucurbita moschata])

HSP 1 Score: 455.3 bits (1170), Expect = 3.1e-124
Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 0


Query: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTAQDRES 60
           MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPD EMLWISTAQDRES
Sbjct: 70  MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDQEMLWISTAQDRES 129

Query: 61  ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 120
           ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP
Sbjct: 130 ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 189

Query: 121 VTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQA 180
           VTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQA
Sbjct: 190 VTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQA 249

Query: 181 LGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV 228
           LGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV
Sbjct: 250 LGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV 296

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BLAST of Carg24854 vs. NCBI nr
Match: KAG6577683.1 (Zinc finger protein ZAT9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 453.0 bits (1164), Expect = 1.5e-123
Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 0


Query: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTAQDRES 60
           MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEML ISTAQDRES
Sbjct: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLRISTAQDRES 60

Query: 61  ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 120
           ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP
Sbjct: 61  ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 120

Query: 121 VTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQA 180
           VTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQA
Sbjct: 121 VTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQA 180

Query: 181 LGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV 228
           LGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV
Sbjct: 181 LGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV 227

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BLAST of Carg24854 vs. NCBI nr
Match: XP_022965161.1 (zinc finger protein ZAT9-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 446.8 bits (1148), Expect = 1.1e-121
Identity = 222/227 (97.80%), Postives = 223/227 (98.24%), Query Frame = 0


Query: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTAQDRES 60
           MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEML IST QDRES
Sbjct: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLCISTIQDRES 60

Query: 61  ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 120
           ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP
Sbjct: 61  ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 120

Query: 121 VTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQA 180
           VT+GKSFRCGKC KSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQA
Sbjct: 121 VTMGKSFRCGKCEKSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQA 180

Query: 181 LGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV 228
           LGGHKRSHLQGSIRAAIDG SRKLEIGLDLNLPAPLEEDDYSVVSFV
Sbjct: 181 LGGHKRSHLQGSIRAAIDGGSRKLEIGLDLNLPAPLEEDDYSVVSFV 227

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BLAST of Carg24854 vs. NCBI nr
Match: XP_023552986.1 (zinc finger protein ZAT9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 443.7 bits (1140), Expect = 9.3e-121
Identity = 222/227 (97.80%), Postives = 222/227 (97.80%), Query Frame = 0


Query: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTAQDRES 60
           MAE HKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWIST QDRES
Sbjct: 57  MAEGHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTVQDRES 116

Query: 61  ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 120
           ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP
Sbjct: 117 ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 176

Query: 121 VTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQA 180
             VGKSFRCGKCRKSFRSNRAL GHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQA
Sbjct: 177 --VGKSFRCGKCRKSFRSNRALVGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQA 236

Query: 181 LGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV 228
           LGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV
Sbjct: 237 LGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV 281

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BLAST of Carg24854 vs. ExPASy Swiss-Prot
Match: Q9M202 (Zinc finger protein ZAT9 OS=Arabidopsis thaliana OX=3702 GN=ZAT9 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 8.4e-32
Identity = 103/285 (36.14%), Postives = 146/285 (51.23%), Query Frame = 0


Query: 3   ESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIK-------TLRSPDPEMLWISTA 62
           ES+KC++C +SFVNG+ALGGHM++H++    E + P +        + S DP+  + S+ 
Sbjct: 2   ESYKCRVCFKSFVNGKALGGHMRSHMSNSHEEEQRPSQLSYETESDVSSSDPKFAFTSSV 61

Query: 63  --QDRESETESK----NPTRRRSKRTRRFKS------------ESPPSSE--PASSISDT 122
             +D ESE+ES     N TR+RSKRTR+  S              P S +  P SS SDT
Sbjct: 62  LLEDGESESESSRNVINLTRKRSKRTRKLDSFVTKKVKTSQLGYKPESDQEPPHSSASDT 121

Query: 123 SPEEDVAICLVMLSMEQGKEQSRTP--------------------VTVGKSFRCGKCRKS 182
           + EED+A CL+MLS ++ K+                          T    ++C  C K 
Sbjct: 122 TTEEDLAFCLMMLSRDKWKKNKSNKEVVEEIETEEESEGYNKINRATTKGRYKCETCGKV 181

Query: 183 FRSNRALFGHR------------KVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQALGG 225
           F+S +AL GHR               R+E E D +     +I +C  C +VF SGQALGG
Sbjct: 182 FKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVVVVAKRIHECPICLRVFASGQALGG 241

[Close]

BLAST of Carg24854 vs. ExPASy Swiss-Prot
Match: Q9SHD0 (Zinc finger protein ZAT4 OS=Arabidopsis thaliana OX=3702 GN=ZAT4 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 7.9e-30
Identity = 111/309 (35.92%), Postives = 144/309 (46.60%), Query Frame = 0


Query: 3   ESHKCKLCSRSFVNGRALGGHMKAHLATFSIE------------HENPI----------- 62
           E +KC+ C +SF+NGRALGGHM++H+ T S E             E P            
Sbjct: 2   ERYKCRFCFKSFINGRALGGHMRSHMLTLSAERCVITGEAEEEVEERPSQLCDDDDDTES 61

Query: 63  ------------KTLRSPDPEMLWISTAQDRESETESK--NPTRRRSKRTRR-----FKS 122
                       K  R  D      +   D ESETES   NPTRRRSKRTR+     F  
Sbjct: 62  DASSSSGEFDNQKMNRLDDELEFDFAEDDDVESETESSRINPTRRRSKRTRKLGSFDFDF 121

Query: 123 ESPPSSEPA---------SSISDTSPEEDVAICLVMLSMEQGKEQSRTPVTVGKS----- 182
           E   +S+P+         SS SDT+ EED+A CL+MLS ++ K+Q +    V +      
Sbjct: 122 EKLTTSQPSELVAEPEHHSSASDTTTEEDLAFCLIMLSRDKWKQQKKKKQRVEEDETDHD 181

Query: 183 ------------FRCGKCRKSFRSNRALFGHR------KVCRNEGE----EDGINGGEWK 225
                       F+C  C K F+S +AL GHR      K C  + E    E  +   E K
Sbjct: 182 SEDYKSSKSRGRFKCETCGKVFKSYQALGGHRASHKKNKACMTKTEQVETEYVLGVKEKK 241

[Close]

BLAST of Carg24854 vs. ExPASy Swiss-Prot
Match: Q39092 (Zinc finger protein ZAT1 OS=Arabidopsis thaliana OX=3702 GN=ZAT1 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.1e-28
Identity = 102/267 (38.20%), Postives = 130/267 (48.69%), Query Frame = 0


Query: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTAQDRES 60
           M E HKCKLC +SF NGRALGGHM++H+    +  +    +    DP  +     QDRES
Sbjct: 1   MEERHKCKLCWKSFANGRALGGHMRSHMLIHPLPSQPESYSSSMADPGFV----LQDRES 60

Query: 61  ETE-SKNPTRRRSKRTRRF-----------------------------KSESPPSSEPAS 120
           ETE SK P+R+RS+  RR                               SES    EP S
Sbjct: 61  ETESSKKPSRKRSRLNRRSISSLRHQQSNEEGKSETARAADIKIGVQELSESCTEQEPMS 120

Query: 121 SISD-TSPEEDVAICLVMLSM------EQGKEQSRTPVTVGKSFRCGKCRKSFRSNRALF 180
           S+SD  + EEDVA+ L++LS       E+  ++ R      K F C  C K F+S +AL 
Sbjct: 121 SVSDAATTEEDVALSLMLLSRDKWEKEEEESDEERWKKKRNKWFECETCEKVFKSYQALG 180

Query: 181 GHRKVCRNE-GEEDGINGGEWKIFK---------CCYCCKVFGSGQALGGHKRSHLQGSI 221
           GHR   + +  E D +   E K  K         C  C KVF SGQALGGHKRSH   S 
Sbjct: 181 GHRASHKKKIAETDQLGSDELKKKKKKSTSSHHECPICAKVFTSGQALGGHKRSH--ASA 240

[Close]

BLAST of Carg24854 vs. ExPASy Swiss-Prot
Match: Q9SSW2 (Zinc finger protein AZF2 OS=Arabidopsis thaliana OX=3702 GN=AZF2 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.6e-14
Identity = 71/228 (31.14%), Postives = 102/228 (44.74%), Query Frame = 0


Query: 39  IKTLRSPDPEMLWISTAQDRESETESKNP--TRRRSKRTRRF----KSESPPSSEPASSI 98
           ++ + +P      I T +D  ++     P   R+RSKR R       S SPP S P S  
Sbjct: 3   LEAMNTPTSSFTRIETKEDLMNDAVFIEPWLKRKRSKRQRSHSPSSSSSSPPRSRPKSQN 62

Query: 99  SDTSPEEDVAICLVMLSMEQGKE-------QSRTPVTVGKS--FRCGKCRKSFRSNRALF 158
            D + EE +A+CL+ML+ +Q  +       QS TP    K+  ++C  C K+F S +AL 
Sbjct: 63  QDLTEEEYLALCLLMLAKDQPSQTRFHQQSQSLTPPPESKNLPYKCNVCEKAFPSYQALG 122

Query: 159 GHRKVCRNE---------------------GEEDGINGGEWKIFKCCYCCKVFGSGQALG 215
           GH+   R +                     GE+  I     KI +C  C KVF +GQALG
Sbjct: 123 GHKASHRIKPPTVISTTADDSTAPTISIVAGEKHPI-AASGKIHECSICHKVFPTGQALG 182

[Close]

BLAST of Carg24854 vs. ExPASy Swiss-Prot
Match: Q9SSW0 (Zinc finger protein AZF3 OS=Arabidopsis thaliana OX=3702 GN=AZF3 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-07
Identity = 55/167 (32.93%), Postives = 78/167 (46.71%), Query Frame = 0


Query: 58  RESETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQS 117
           R +  E     ++RSKR+R     +   +E          EE +A CL++L+ + G   S
Sbjct: 17  RFNGVEQWTKCKKRSKRSRSDLHHNHRLTE----------EEYLAFCLMLLARDGGDLDS 76

Query: 118 RTPVTVGKSFRCGKCRKSFRSNRALFGHRKVCRN---EGEED-GINGGEWKIFKCCYCCK 177
            T V    S++CG C K+F S +AL GH+   R+    GE D        K   C  C K
Sbjct: 77  VT-VAEKPSYKCGVCYKTFSSYQALGGHKASHRSLYGGGENDKSTPSTAVKSHVCSVCGK 136

Query: 178 VFGSGQALGGHKRSHLQGSI--------RAAIDGSSRKLEIGLDLNL 213
            F +GQALGGHKR H  G +         + +  SS +   G DLN+
Sbjct: 137 SFATGQALGGHKRCHYDGGVSNSEGVGSTSHVSSSSHR---GFDLNI 169

[Close]

BLAST of Carg24854 vs. ExPASy TrEMBL
Match: A0A6J1EBX9 (zinc finger protein ZAT9-like OS=Cucurbita moschata OX=3662 GN=LOC111431160 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 1.5e-124
Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 0


Query: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTAQDRES 60
           MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPD EMLWISTAQDRES
Sbjct: 70  MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDQEMLWISTAQDRES 129

Query: 61  ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 120
           ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP
Sbjct: 130 ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 189

Query: 121 VTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQA 180
           VTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQA
Sbjct: 190 VTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQA 249

Query: 181 LGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV 228
           LGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV
Sbjct: 250 LGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV 296

[Close]

BLAST of Carg24854 vs. ExPASy TrEMBL
Match: A0A6J1HKY5 (zinc finger protein ZAT9-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465102 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 5.3e-122
Identity = 222/227 (97.80%), Postives = 223/227 (98.24%), Query Frame = 0


Query: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTAQDRES 60
           MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEML IST QDRES
Sbjct: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLCISTIQDRES 60

Query: 61  ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 120
           ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP
Sbjct: 61  ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 120

Query: 121 VTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQA 180
           VT+GKSFRCGKC KSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQA
Sbjct: 121 VTMGKSFRCGKCEKSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQA 180

Query: 181 LGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV 228
           LGGHKRSHLQGSIRAAIDG SRKLEIGLDLNLPAPLEEDDYSVVSFV
Sbjct: 181 LGGHKRSHLQGSIRAAIDGGSRKLEIGLDLNLPAPLEEDDYSVVSFV 227

[Close]

BLAST of Carg24854 vs. ExPASy TrEMBL
Match: A0A6J1HMY6 (zinc finger protein ZAT9-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465102 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.5e-119
Identity = 222/237 (93.67%), Postives = 223/237 (94.09%), Query Frame = 0


Query: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTAQDRES 60
           MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEML IST QDRES
Sbjct: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLCISTIQDRES 60

Query: 61  ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRT- 120
           ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRT 
Sbjct: 61  ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 120

Query: 121 ---------PVTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCY 180
                    PVT+GKSFRCGKC KSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCY
Sbjct: 121 ESKKSTAAMPVTMGKSFRCGKCEKSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCY 180

Query: 181 CCKVFGSGQALGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV 228
           CCKVFGSGQALGGHKRSHLQGSIRAAIDG SRKLEIGLDLNLPAPLEEDDYSVVSFV
Sbjct: 181 CCKVFGSGQALGGHKRSHLQGSIRAAIDGGSRKLEIGLDLNLPAPLEEDDYSVVSFV 237

[Close]

BLAST of Carg24854 vs. ExPASy TrEMBL
Match: A0A5A7TCS9 (Zinc finger protein ZAT4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00400 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.7e-91
Identity = 193/255 (75.69%), Postives = 203/255 (79.61%), Query Frame = 0


Query: 3   ESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEML----WISTAQDR 62
           E HKC+LCSRSF NGRALGGHMKAHLATFSIEH+   KT +SPD EM+     IS  QDR
Sbjct: 4   ERHKCRLCSRSFTNGRALGGHMKAHLATFSIEHQ---KTFKSPDLEMVSVNGSISIVQDR 63

Query: 63  ESETESKNPTRRRSKRTRRFKSES----PPSSEPASSISDTSPEEDVAICLVMLSMEQ-- 122
           ESETESKNPTRRRSKRTRRF +ES     PS EPASSISDTSPEEDVAICLVMLSME+  
Sbjct: 64  ESETESKNPTRRRSKRTRRFNTESLPSPSPSPEPASSISDTSPEEDVAICLVMLSMEKPS 123

Query: 123 -GKEQSRTPVT----------VGKSFRCGKCRKSFRSNRALFGHRKVCRNEG-EEDG--- 182
             K+QSRTP +          V KSFRCGKCRK+FRSNRALFGHRKVCR EG EEDG   
Sbjct: 124 SWKDQSRTPESEKSTAAMVGRVRKSFRCGKCRKTFRSNRALFGHRKVCRKEGEEEDGEEE 183

Query: 183 -----INGGEWKIFKCCYCCKVFGSGQALGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNL 228
                +NGG WKIFKC YCCKVFGSGQALGGHKRSHLQGSIR AIDGSS KLEIGLDLNL
Sbjct: 184 EEKGMVNGGNWKIFKCPYCCKVFGSGQALGGHKRSHLQGSIRTAIDGSSSKLEIGLDLNL 243

[Close]

BLAST of Carg24854 vs. ExPASy TrEMBL
Match: A0A1S3BKU0 (zinc finger protein ZAT4-like OS=Cucumis melo OX=3656 GN=LOC103491118 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.7e-91
Identity = 193/255 (75.69%), Postives = 203/255 (79.61%), Query Frame = 0


Query: 3   ESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEML----WISTAQDR 62
           E HKC+LCSRSF NGRALGGHMKAHLATFSIEH+   KT +SPD EM+     IS  QDR
Sbjct: 4   ERHKCRLCSRSFTNGRALGGHMKAHLATFSIEHQ---KTFKSPDLEMVSVNGSISIVQDR 63

Query: 63  ESETESKNPTRRRSKRTRRFKSES----PPSSEPASSISDTSPEEDVAICLVMLSMEQ-- 122
           ESETESKNPTRRRSKRTRRF +ES     PS EPASSISDTSPEEDVAICLVMLSME+  
Sbjct: 64  ESETESKNPTRRRSKRTRRFNTESLPSPSPSPEPASSISDTSPEEDVAICLVMLSMEKPS 123

Query: 123 -GKEQSRTPVT----------VGKSFRCGKCRKSFRSNRALFGHRKVCRNEG-EEDG--- 182
             K+QSRTP +          V KSFRCGKCRK+FRSNRALFGHRKVCR EG EEDG   
Sbjct: 124 SWKDQSRTPESEKSTAAMVGRVRKSFRCGKCRKTFRSNRALFGHRKVCRKEGEEEDGEEE 183

Query: 183 -----INGGEWKIFKCCYCCKVFGSGQALGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNL 228
                +NGG WKIFKC YCCKVFGSGQALGGHKRSHLQGSIR AIDGSS KLEIGLDLNL
Sbjct: 184 EEKGMVNGGNWKIFKCPYCCKVFGSGQALGGHKRSHLQGSIRTAIDGSSSKLEIGLDLNL 243

[Close]

BLAST of Carg24854 vs. TAIR 10
Match: AT3G60580.1 (C2H2-like zinc finger protein )

HSP 1 Score: 138.7 bits (348), Expect = 6.0e-33
Identity = 103/285 (36.14%), Postives = 146/285 (51.23%), Query Frame = 0


Query: 3   ESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIK-------TLRSPDPEMLWISTA 62
           ES+KC++C +SFVNG+ALGGHM++H++    E + P +        + S DP+  + S+ 
Sbjct: 2   ESYKCRVCFKSFVNGKALGGHMRSHMSNSHEEEQRPSQLSYETESDVSSSDPKFAFTSSV 61

Query: 63  --QDRESETESK----NPTRRRSKRTRRFKS------------ESPPSSE--PASSISDT 122
             +D ESE+ES     N TR+RSKRTR+  S              P S +  P SS SDT
Sbjct: 62  LLEDGESESESSRNVINLTRKRSKRTRKLDSFVTKKVKTSQLGYKPESDQEPPHSSASDT 121

Query: 123 SPEEDVAICLVMLSMEQGKEQSRTP--------------------VTVGKSFRCGKCRKS 182
           + EED+A CL+MLS ++ K+                          T    ++C  C K 
Sbjct: 122 TTEEDLAFCLMMLSRDKWKKNKSNKEVVEEIETEEESEGYNKINRATTKGRYKCETCGKV 181

Query: 183 FRSNRALFGHR------------KVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQALGG 225
           F+S +AL GHR               R+E E D +     +I +C  C +VF SGQALGG
Sbjct: 182 FKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVVVVAKRIHECPICLRVFASGQALGG 241

[Close]

BLAST of Carg24854 vs. TAIR 10
Match: AT2G45120.1 (C2H2-like zinc finger protein )

HSP 1 Score: 132.1 bits (331), Expect = 5.6e-31
Identity = 111/309 (35.92%), Postives = 144/309 (46.60%), Query Frame = 0


Query: 3   ESHKCKLCSRSFVNGRALGGHMKAHLATFSIE------------HENPI----------- 62
           E +KC+ C +SF+NGRALGGHM++H+ T S E             E P            
Sbjct: 2   ERYKCRFCFKSFINGRALGGHMRSHMLTLSAERCVITGEAEEEVEERPSQLCDDDDDTES 61

Query: 63  ------------KTLRSPDPEMLWISTAQDRESETESK--NPTRRRSKRTRR-----FKS 122
                       K  R  D      +   D ESETES   NPTRRRSKRTR+     F  
Sbjct: 62  DASSSSGEFDNQKMNRLDDELEFDFAEDDDVESETESSRINPTRRRSKRTRKLGSFDFDF 121

Query: 123 ESPPSSEPA---------SSISDTSPEEDVAICLVMLSMEQGKEQSRTPVTVGKS----- 182
           E   +S+P+         SS SDT+ EED+A CL+MLS ++ K+Q +    V +      
Sbjct: 122 EKLTTSQPSELVAEPEHHSSASDTTTEEDLAFCLIMLSRDKWKQQKKKKQRVEEDETDHD 181

Query: 183 ------------FRCGKCRKSFRSNRALFGHR------KVCRNEGE----EDGINGGEWK 225
                       F+C  C K F+S +AL GHR      K C  + E    E  +   E K
Sbjct: 182 SEDYKSSKSRGRFKCETCGKVFKSYQALGGHRASHKKNKACMTKTEQVETEYVLGVKEKK 241

[Close]

BLAST of Carg24854 vs. TAIR 10
Match: AT1G02030.1 (C2H2-like zinc finger protein )

HSP 1 Score: 128.3 bits (321), Expect = 8.1e-30
Identity = 102/267 (38.20%), Postives = 130/267 (48.69%), Query Frame = 0


Query: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTAQDRES 60
           M E HKCKLC +SF NGRALGGHM++H+    +  +    +    DP  +     QDRES
Sbjct: 1   MEERHKCKLCWKSFANGRALGGHMRSHMLIHPLPSQPESYSSSMADPGFV----LQDRES 60

Query: 61  ETE-SKNPTRRRSKRTRRF-----------------------------KSESPPSSEPAS 120
           ETE SK P+R+RS+  RR                               SES    EP S
Sbjct: 61  ETESSKKPSRKRSRLNRRSISSLRHQQSNEEGKSETARAADIKIGVQELSESCTEQEPMS 120

Query: 121 SISD-TSPEEDVAICLVMLSM------EQGKEQSRTPVTVGKSFRCGKCRKSFRSNRALF 180
           S+SD  + EEDVA+ L++LS       E+  ++ R      K F C  C K F+S +AL 
Sbjct: 121 SVSDAATTEEDVALSLMLLSRDKWEKEEEESDEERWKKKRNKWFECETCEKVFKSYQALG 180

Query: 181 GHRKVCRNE-GEEDGINGGEWKIFK---------CCYCCKVFGSGQALGGHKRSHLQGSI 221
           GHR   + +  E D +   E K  K         C  C KVF SGQALGGHKRSH   S 
Sbjct: 181 GHRASHKKKIAETDQLGSDELKKKKKKSTSSHHECPICAKVFTSGQALGGHKRSH--ASA 240

[Close]

BLAST of Carg24854 vs. TAIR 10
Match: AT3G19580.1 (zinc-finger protein 2 )

HSP 1 Score: 80.1 bits (196), Expect = 2.5e-15
Identity = 71/228 (31.14%), Postives = 102/228 (44.74%), Query Frame = 0


Query: 39  IKTLRSPDPEMLWISTAQDRESETESKNP--TRRRSKRTRRF----KSESPPSSEPASSI 98
           ++ + +P      I T +D  ++     P   R+RSKR R       S SPP S P S  
Sbjct: 3   LEAMNTPTSSFTRIETKEDLMNDAVFIEPWLKRKRSKRQRSHSPSSSSSSPPRSRPKSQN 62

Query: 99  SDTSPEEDVAICLVMLSMEQGKE-------QSRTPVTVGKS--FRCGKCRKSFRSNRALF 158
            D + EE +A+CL+ML+ +Q  +       QS TP    K+  ++C  C K+F S +AL 
Sbjct: 63  QDLTEEEYLALCLLMLAKDQPSQTRFHQQSQSLTPPPESKNLPYKCNVCEKAFPSYQALG 122

Query: 159 GHRKVCRNE---------------------GEEDGINGGEWKIFKCCYCCKVFGSGQALG 215
           GH+   R +                     GE+  I     KI +C  C KVF +GQALG
Sbjct: 123 GHKASHRIKPPTVISTTADDSTAPTISIVAGEKHPI-AASGKIHECSICHKVFPTGQALG 182

[Close]

BLAST of Carg24854 vs. TAIR 10
Match: AT3G19580.2 (zinc-finger protein 2 )

HSP 1 Score: 80.1 bits (196), Expect = 2.5e-15
Identity = 71/228 (31.14%), Postives = 102/228 (44.74%), Query Frame = 0


Query: 39  IKTLRSPDPEMLWISTAQDRESETESKNP--TRRRSKRTRRF----KSESPPSSEPASSI 98
           ++ + +P      I T +D  ++     P   R+RSKR R       S SPP S P S  
Sbjct: 3   LEAMNTPTSSFTRIETKEDLMNDAVFIEPWLKRKRSKRQRSHSPSSSSSSPPRSRPKSQN 62

Query: 99  SDTSPEEDVAICLVMLSMEQGKE-------QSRTPVTVGKS--FRCGKCRKSFRSNRALF 158
            D + EE +A+CL+ML+ +Q  +       QS TP    K+  ++C  C K+F S +AL 
Sbjct: 63  QDLTEEEYLALCLLMLAKDQPSQTRFHQQSQSLTPPPESKNLPYKCNVCEKAFPSYQALG 122

Query: 159 GHRKVCRNE---------------------GEEDGINGGEWKIFKCCYCCKVFGSGQALG 215
           GH+   R +                     GE+  I     KI +C  C KVF +GQALG
Sbjct: 123 GHKASHRIKPPTVISTTADDSTAPTISIVAGEKHPI-AASGKIHECSICHKVFPTGQALG 182

The following BLAST results are available for this feature:

BLAST of Carg24854 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015720.1	3.7e-125	100.00	Zinc finger protein ZAT9, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022923480.1	3.1e-124	99.56	zinc finger protein ZAT9-like [Cucurbita moschata]	[more]
KAG6577683.1	1.5e-123	99.56	Zinc finger protein ZAT9, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022965161.1	1.1e-121	97.80	zinc finger protein ZAT9-like isoform X2 [Cucurbita maxima]	[more]
XP_023552986.1	9.3e-121	97.80	zinc finger protein ZAT9-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg24854 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M202	8.4e-32	36.14	Zinc finger protein ZAT9 OS=Arabidopsis thaliana OX=3702 GN=ZAT9 PE=2 SV=1	[more]
Q9SHD0	7.9e-30	35.92	Zinc finger protein ZAT4 OS=Arabidopsis thaliana OX=3702 GN=ZAT4 PE=2 SV=1	[more]
Q39092	1.1e-28	38.20	Zinc finger protein ZAT1 OS=Arabidopsis thaliana OX=3702 GN=ZAT1 PE=2 SV=1	[more]
Q9SSW2	3.6e-14	31.14	Zinc finger protein AZF2 OS=Arabidopsis thaliana OX=3702 GN=AZF2 PE=2 SV=1	[more]
Q9SSW0	1.1e-07	32.93	Zinc finger protein AZF3 OS=Arabidopsis thaliana OX=3702 GN=AZF3 PE=1 SV=1	[more]

BLAST of Carg24854 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EBX9	1.5e-124	99.56	zinc finger protein ZAT9-like OS=Cucurbita moschata OX=3662 GN=LOC111431160 PE=4...	[more]
A0A6J1HKY5	5.3e-122	97.80	zinc finger protein ZAT9-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11146...	[more]
A0A6J1HMY6	1.5e-119	93.67	zinc finger protein ZAT9-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11146...	[more]
A0A5A7TCS9	3.7e-91	75.69	Zinc finger protein ZAT4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BKU0	3.7e-91	75.69	zinc finger protein ZAT4-like OS=Cucumis melo OX=3656 GN=LOC103491118 PE=4 SV=1	[more]

BLAST of Carg24854 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60580.1	6.0e-33	36.14	C2H2-like zinc finger protein	[more]
AT2G45120.1	5.6e-31	35.92	C2H2-like zinc finger protein	[more]
AT1G02030.1	8.1e-30	38.20	C2H2-like zinc finger protein	[more]
AT3G19580.1	2.5e-15	31.14	zinc-finger protein 2	[more]
AT3G19580.2	2.5e-15	31.14	zinc-finger protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 5..27 e-value: 0.062 score: 22.4 coord: 166..188 e-value: 2.4 score: 17.2 coord: 127..147 e-value: 34.0 score: 8.5
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 168..188
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 7..27
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 127..156 score: 10.138311
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 166..188 score: 9.223856
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 5..27 score: 9.577168
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 166..190 e-value: 1.9E-8 score: 34.1 coord: 5..29 e-value: 1.2E-7 score: 31.5 coord: 127..147 e-value: 0.0029 score: 17.6
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 106..193 e-value: 8.5E-8 score: 34.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..97
None	No IPR available	PANTHER	PTHR46326:SF8	C2H2-LIKE ZINC FINGER PROTEIN	coord: 3..33 coord: 35..225
IPR044303	Zinc finger protein ZAT1/4/9	PANTHER	PTHR46326	ZINC FINGER PROTEIN ZAT1-RELATED	coord: 3..33 coord: 35..225
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 164..190
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 4..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24854-RA	Carg24854-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane