Carg24755 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg24755
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr14: 13429963 .. 13430191 (-)
RNA-Seq ExpressionCarg24755
SyntenyCarg24755
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCTTCCTCTCAAGATCTCATCATCTAGTTCTCCTTCCAATTTCTTCATCTCTCGCTGTATGAATCACGCTGGCAACGACCTCGAGGAGCTCCTGTGGCTCCAGGAGTAGCAGCGGTGGTTTCATGAAAAGGAACAGTGGATCCGCGAAGAGCAGCGTTGAGCCAGAGAACGCGAGTTGCTTCTGCTGGAAATTGCTGAGGTTAAGCTGCAAATTCAAGCGTTAG

mRNA sequence

ATGATTCTTCCTCTCAAGATCTCATCATCTAGTTCTCCTTCCAATTTCTTCATCTCTCGCTGTATGAATCACGCTGGCAACGACCTCGAGGAGCTCCTGAGTAGCAGCGGTGGTTTCATGAAAAGGAACAGTGGATCCGCGAAGAGCAGCGTTGAGCCAGAGAACGCGAGTTGCTTCTGCTGGAAATTGCTGAGGTTAAGCTGCAAATTCAAGCGTTAG

Coding sequence (CDS)

ATGATTCTTCCTCTCAAGATCTCATCATCTAGTTCTCCTTCCAATTTCTTCATCTCTCGCTGTATGAATCACGCTGGCAACGACCTCGAGGAGCTCCTGAGTAGCAGCGGTGGTTTCATGAAAAGGAACAGTGGATCCGCGAAGAGCAGCGTTGAGCCAGAGAACGCGAGTTGCTTCTGCTGGAAATTGCTGAGGTTAAGCTGCAAATTCAAGCGTTAG

Protein sequence

MILPLKISSSSSPSNFFISRCMNHAGNDLEELLSSSGGFMKRNSGSAKSSVEPENASCFCWKLLRLSCKFKR
Homology
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BLAST of Carg24755 vs. NCBI nr
Match: KAG7018853.1 (hypothetical protein SDJN02_20726, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 146.4 bits (368), Expect = 9.8e-32
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MILPLKISSSSSPSNFFISRCMNHAGNDLEELLSSSGGFMKRNSGSAKSSVEPENASCFC 60
          MILPLKISSSSSPSNFFISRCMNHAGNDLEELLSSSGGFMKRNSGSAKSSVEPENASCFC
Sbjct: 1  MILPLKISSSSSPSNFFISRCMNHAGNDLEELLSSSGGFMKRNSGSAKSSVEPENASCFC 60

Query: 61 WKLLRLSCKFKR 73
          WKLLRLSCKFKR
Sbjct: 61 WKLLRLSCKFKR 72

The following BLAST results are available for this feature:
BLAST of Carg24755 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7018853.19.8e-32100.00hypothetical protein SDJN02_20726, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg24755 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg24755 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg24755 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24755-RACarg24755-RAmRNA