Carg24679 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg24679
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr11: 5851159 .. 5853900 (-)
RNA-Seq ExpressionCarg24679
SyntenyCarg24679
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAACTACCTGCACGTGGACAGAAAGACTCTACGAAGCTTCATTGTTCATTGGGATTGGCTTTGGGCCTTTCCTGCACAGCTTAGGTGGAGGGGGAAGAAGGCCCCCTTCCCGAGGGGAGTGGGGAAGCGAGTCATCAGTGAGATACCACTCTGAAAGAGCTAGAATTCTAACCTTGTATCAGGACCTACGGACCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGGCGTAGGCCTCAAGGTAATAGAGGCGTGCAAAGGTTTACTCGGGCCAGACGGAGATTGCCCCTCGAGTGCAAAGGTAGAAGGGAGCTTGACTGAAAGACCCACCCGTCGAGTAGAGACGAAAGTCGGCCTTAGTGATCCGACAGTGCCGAGTGAAAAGGCCATTGCTCAATGGATAAAAGTTACTGTTTTGAAAAATCATTGAAACATTTCTATTTAAAAATACTGAGTAAGTAACACTACTGTTGTGGACAGAAAATGCAATCACATGCAACATGGTTCATGGTGGAATCTACTTTTCATCACTATTATTTGGACTTTACTTTCTTTTTCGAATAGGATTGGACGTATATTACTTTTCTACGACATGATTCATGCATGAATTCACTATGTGGCTCCATATACGTACCTGTAGGCCTCACTATTAGCTAGCACGAATTAGCTAACCAAGGCGAAAACTGAAAATGACTCAAAAGCTGTGCGCAGACAGTCGAGCTGAAATACAAGCCAACTGTAAAGAGGCAACTAATGACGTCACACAGTGACTTGGGAGAGTCGATGTCACGTTGGTGCTAGGGAGGATGGCTCCGTACACACATCTAGGCCTTCGCTTGGACTACACCTCTACTGACATTGAGCTGGACAAACCGTCAAAATGTAGTTCAAACATGTGAGATGTTGTGTTTGTTATTTCAGTCCCGCTTCTAAGAGTTAAACATATTTTGTCCTCATAAAATTGTTCTAAACAAAGCACTCTTAATCTTAAAATTCCTATTTTCATGATCACTCTCATTCGAACGTGGTCACGATTCATTTATGTCTGTCTCTTTAAACCAGATGTCACGTATGTGTACGTGGAGTGGGAAATAACTGGTAATGATATTTCCCAATATATTTTTGGAAGCTTTTTCTCGAATGAAAATCATAATAATAATTATCTCGAATTTGATAGAAAATACTCCTGAAAACAAATGGACTAAATTTTGATTAAAGATGGAGATTAGACTCAAAATACACGAGGTTTTAACCTAATTTTTTACGAGTCAACAGACCATTCGTTCATATTTTCGAACATTTGAATTCAAAAACCATATTTTCGAAACTTGAACGATCGAACAAATGGATGTATAGGAGAAATTGATTCCGTTCCATTAATAAAATAGATTTTTTTTTATTTATTTATATTTTTTTTATTATTTTTTTTTTTTGTGGGAAAATGTTGTATAAATATTTGTGCGTGTTTAGCCACAAAGCCTCCCTCACTCTCTTAATTGAAGGAAATGAAAGATCAAGGAAATAACATGATGGCTTTTGATATGAGTTCTCTTGGGGCAAATCTTCCTCAAAAGTAAGCAATTTTGGCCTACTTTTTTTTGTTAGTTTAATACTTGTTTTACGTCGTTTTGAATGTATAATTACGAGATAGTAGGTTCGAGTTTTTCAATTTTGTTGTGTGACTATCGTGCAAGTATCATGTCGGAACGTTTAAAAAAAACGATGTGATATCTCACATTGGTTGAGGAGAGAACGAAACACCCTTCATAAGGGTGTAGAAACCTTTCCCTAACATACTCGTAATGGAGAAGTCGATAAGGGAAACCCCAAAACCCTTGAGGGGGAAGCTCGAAAGGGAAATCCCAAAAAGGATAGTATCTGGATGAACACCGATTCTACTGTATAACTCTGAAAGACACGTTTTTAAAGGTTTGAGGGTAAGCTCGAAAGGAAATTTTACATTACAAACATAATCTTCCTTTCACGTGGGAAATGAGAAACATAGCCAACGTAGATTACAGTCTTTTTACTATCGTATTTGCATACTCCTCTCGTAACTATTTTCTTTTTGGTTTCCTTTTACGTGGGTAATGAGAAACACAGCCAACGTAGATTACCGTCTTTTTAGTATCGTATTTGCATACTCCTCTCATAACTATTTTCTTTTTGTTTTTTTTTTTATATATATATATTTCATAACTATTTATATATATGACCCAATAACCCGAACTACCTAGATCACCCAATCAAACCCTAAAAATTAAGTTGGGTTAGCTTTTTTTCCTTTTTTCTTTTTTTCCCGGGGTTGGATTAAATTTTTGAAAAACTAAAAAATTCAGTTCGGTTTGTGGGTTAACTTTTTTTTGATTGAGTTAACTCGACCCACTCGAAAATAAGGTTACAACCCAACTCAACCCTATTTTTACGGAAGCGAAAAATATTTAACATTTGTAATCGATGTTAGTGAGACTTGTAAATATTTGATATTTGAATGGGTTGTATAGCTGACGTTGTGGAGTTGGAGTATAGGAGGGGATTGTCGAGGTACTATTCAGGAAAGGCGAGGTCGTTTGCTTGCATAGCGGATGCTCGATGTGTAGAAGACTTGAAGAAACCAACACATCCAGATGCGAAGAAAAGGAAGAAACATTCTGATTGCAAAGGAATTCATGTTTCTCCTCATCACTGTCGACGAGCTTCATCCACTCATTGTTCTATTCCCTTCTTTGCTTCATGA

mRNA sequence

ATGCGAACTACCTGCACGTGGACAGAAAGACTCTACGAAGCTTCATTGTTCATTGGGATTGGCTTTGGGCCTTTCCTGCACAGCTTAGGTGGAGGGGGAAGAAGGCCCCCTTCCCGAGGGGAGTGGGGAAGCGAGTCATCAGTGAGATACCACTCTGAAAGAGCTAGAATTCTAACCTTGTATCAGGACCTACGGACCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGGCGTAGGCCTCAAGGTAATAGAGGCGTGCAAAGGTTTACTCGGGCCAGACGGAGATTGCCCCTCGAGTGCAAAGGTAGAAGGGAGCTTGACTGAAAGACCCACCCGTCGAGTAGAGACGAAAGTCGGCCTTAGTGATCCGACAGTGCCGAGTGAAAAGGCCATTGCTCAATGGATAAAAGTTACTACAGTCGAGCTGAAATACAAGCCAACTGTAAAGAGGCAACTAATGACGTCACACAGTGACTTGGGAGAGTCGATGTCACCTGACGTTGTGGAGTTGGAGTATAGGAGGGGATTGTCGAGGTACTATTCAGGAAAGGCGAGGTCGTTTGCTTGCATAGCGGATGCTCGATGTGTAGAAGACTTGAAGAAACCAACACATCCAGATGCGAAGAAAAGGAAGAAACATTCTGATTGCAAAGGAATTCATGTTTCTCCTCATCACTGTCGACGAGCTTCATCCACTCATTGTTCTATTCCCTTCTTTGCTTCATGA

Coding sequence (CDS)

ATGCGAACTACCTGCACGTGGACAGAAAGACTCTACGAAGCTTCATTGTTCATTGGGATTGGCTTTGGGCCTTTCCTGCACAGCTTAGGTGGAGGGGGAAGAAGGCCCCCTTCCCGAGGGGAGTGGGGAAGCGAGTCATCAGTGAGATACCACTCTGAAAGAGCTAGAATTCTAACCTTGTATCAGGACCTACGGACCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGGCGTAGGCCTCAAGGTAATAGAGGCGTGCAAAGGTTTACTCGGGCCAGACGGAGATTGCCCCTCGAGTGCAAAGGTAGAAGGGAGCTTGACTGAAAGACCCACCCGTCGAGTAGAGACGAAAGTCGGCCTTAGTGATCCGACAGTGCCGAGTGAAAAGGCCATTGCTCAATGGATAAAAGTTACTACAGTCGAGCTGAAATACAAGCCAACTGTAAAGAGGCAACTAATGACGTCACACAGTGACTTGGGAGAGTCGATGTCACCTGACGTTGTGGAGTTGGAGTATAGGAGGGGATTGTCGAGGTACTATTCAGGAAAGGCGAGGTCGTTTGCTTGCATAGCGGATGCTCGATGTGTAGAAGACTTGAAGAAACCAACACATCCAGATGCGAAGAAAAGGAAGAAACATTCTGATTGCAAAGGAATTCATGTTTCTCCTCATCACTGTCGACGAGCTTCATCCACTCATTGTTCTATTCCCTTCTTTGCTTCATGA

Protein sequence

MRTTCTWTERLYEASLFIGIGFGPFLHSLGGGGRRPPSRGEWGSESSVRYHSERARILTLYQDLRTKGQSQVDSFYGGVGLKVIEACKGLLGPDGDCPSSAKVEGSLTERPTRRVETKVGLSDPTVPSEKAIAQWIKVTTVELKYKPTVKRQLMTSHSDLGESMSPDVVELEYRRGLSRYYSGKARSFACIADARCVEDLKKPTHPDAKKRKKHSDCKGIHVSPHHCRRASSTHCSIPFFAS
Homology
BLAST of Carg24679 vs. NCBI nr
Match: KAG7022280.1 (hypothetical protein SDJN02_16011, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 497.7 bits (1280), Expect = 5.8e-137
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0

Query: 1   MRTTCTWTERLYEASLFIGIGFGPFLHSLGGGGRRPPSRGEWGSESSVRYHSERARILTL 60
           MRTTCTWTERLYEASLFIGIGFGPFLHSLGGGGRRPPSRGEWGSESSVRYHSERARILTL
Sbjct: 1   MRTTCTWTERLYEASLFIGIGFGPFLHSLGGGGRRPPSRGEWGSESSVRYHSERARILTL 60

Query: 61  YQDLRTKGQSQVDSFYGGVGLKVIEACKGLLGPDGDCPSSAKVEGSLTERPTRRVETKVG 120
           YQDLRTKGQSQVDSFYGGVGLKVIEACKGLLGPDGDCPSSAKVEGSLTERPTRRVETKVG
Sbjct: 61  YQDLRTKGQSQVDSFYGGVGLKVIEACKGLLGPDGDCPSSAKVEGSLTERPTRRVETKVG 120

Query: 121 LSDPTVPSEKAIAQWIKVTTVELKYKPTVKRQLMTSHSDLGESMSPDVVELEYRRGLSRY 180
           LSDPTVPSEKAIAQWIKVTTVELKYKPTVKRQLMTSHSDLGESMSPDVVELEYRRGLSRY
Sbjct: 121 LSDPTVPSEKAIAQWIKVTTVELKYKPTVKRQLMTSHSDLGESMSPDVVELEYRRGLSRY 180

Query: 181 YSGKARSFACIADARCVEDLKKPTHPDAKKRKKHSDCKGIHVSPHHCRRASSTHCSIPFF 240
           YSGKARSFACIADARCVEDLKKPTHPDAKKRKKHSDCKGIHVSPHHCRRASSTHCSIPFF
Sbjct: 181 YSGKARSFACIADARCVEDLKKPTHPDAKKRKKHSDCKGIHVSPHHCRRASSTHCSIPFF 240

Query: 241 AS 243
           AS
Sbjct: 241 AS 242

BLAST of Carg24679 vs. NCBI nr
Match: KAG9438714.1 (hypothetical protein H6P81_021346 [Aristolochia fimbriata])

HSP 1 Score: 149.8 bits (377), Expect = 3.0e-32
Identity = 90/134 (67.16%), Postives = 94/134 (70.15%), Query Frame = 0

Query: 6   TWTERLYEASLFIGIGFGPFLHSLGGGGRRPPSRGEWGSESSVRYHSERARILTLYQDLR 65
           T TER YEA LF GIGFGPF   L    ++  S G  GSE SVRYHS RARILTL QDLR
Sbjct: 108 TDTERPYEALLFPGIGFGPFPAQLRWKAKK-ASLG--GSEPSVRYHSGRARILTLCQDLR 167

Query: 66  TKGQSQVDSFYGGVGLKVIEACKGLLGPDGDCPSSAKVEGSLTERPTRRVETKVGLSDPT 125
            KGQSQ           V EACKG LGPDGD PSSAK EGSLT RPTRR  TKVGLSDPT
Sbjct: 168 AKGQSQ-----------VTEACKGFLGPDGDWPSSAKAEGSLTARPTRRAGTKVGLSDPT 227

Query: 126 VPSEKAIAQWIKVT 140
           VPS +A+AQ IKVT
Sbjct: 228 VPSGRAVAQRIKVT 227

BLAST of Carg24679 vs. NCBI nr
Match: KAG6588432.1 (hypothetical protein SDJN03_16997, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 149.1 bits (375), Expect = 5.1e-32
Identity = 71/79 (89.87%), Postives = 72/79 (91.14%), Query Frame = 0

Query: 164 MSPDVVELEYRRGLSRYYSGKARSFACIADARCVEDLKKPTHPDAKKRKKHSDCKGIHVS 223
           MS     L  +RGLSRYYSGKARSFACIADARCVEDLKKPTHPDAKKRKKHSDCKGIHVS
Sbjct: 13  MSSLGANLPQKRGLSRYYSGKARSFACIADARCVEDLKKPTHPDAKKRKKHSDCKGIHVS 72

Query: 224 PHHCRRASSTHCSIPFFAS 243
           PHHCRRASSTHCSIPFFAS
Sbjct: 73  PHHCRRASSTHCSIPFFAS 91

BLAST of Carg24679 vs. NCBI nr
Match: KAD5318097.1 (hypothetical protein E3N88_18043 [Mikania micrantha])

HSP 1 Score: 145.6 bits (366), Expect = 5.6e-31
Identity = 83/125 (66.40%), Postives = 87/125 (69.60%), Query Frame = 0

Query: 24  PFLHSLGGGGRR---PPSRGE-----WGSESSVRYHSERARILTLYQDLRTKGQSQVDSF 83
           P   +L  GGR    P   GE      GSE SVRYHS RARILTL QD+R KGQSQVDSF
Sbjct: 5   PATEALVNGGRNYNGPKVEGEEGLLPGGSEPSVRYHSGRARILTLCQDIRAKGQSQVDSF 64

Query: 84  YGG-VGLKVIEACKGLLGPDGDCPSSAKVEGSLTERPTRRVETKVGLSDPTVPSEKAIAQ 140
           YG     KV EACKG LGPDGD P SAK EGSLT R TRR  TKV LSDPTVPS +A+AQ
Sbjct: 65  YGAYASQKVTEACKGFLGPDGDWPLSAKAEGSLTARSTRRAGTKVDLSDPTVPSGRAVAQ 124

BLAST of Carg24679 vs. NCBI nr
Match: TKY72915.1 (hypothetical protein E2542_SST01661 [Spatholobus suberectus])

HSP 1 Score: 145.2 bits (365), Expect = 7.3e-31
Identity = 82/128 (64.06%), Postives = 88/128 (68.75%), Query Frame = 0

Query: 1   MRTTCTWTERLYEASLFIGIGFGPFLHSLGGGGRRPPSRGEWGSESSVRYHSERARILTL 60
           MRTTCTWTER +EA LF  IGF  FL SLGGG RRPPS    G E S+RYHS+RARILT+
Sbjct: 5   MRTTCTWTERPFEALLFPEIGFRLFLCSLGGGQRRPPS---GGLEPSMRYHSKRARILTM 64

Query: 61  YQDLRTKGQSQVDSFYGGVGLKVIEACKGLLGPDGDCPSSAKVEGSLTERPTRRVETKVG 120
            QDL  KGQSQ              ACKG LGPD D PSSAK +GSL  RPT R +TKVG
Sbjct: 65  CQDLWAKGQSQASL-----------ACKGFLGPDKDWPSSAKAKGSLIARPTSRAKTKVG 118

Query: 121 LSDPTVPS 129
           LSD TVPS
Sbjct: 125 LSDSTVPS 118

BLAST of Carg24679 vs. ExPASy TrEMBL
Match: A0A6N2NAY5 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS480550 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 9.6e-45
Identity = 103/137 (75.18%), Postives = 105/137 (76.64%), Query Frame = 0

Query: 1   MRTTCTWTERLYEASLFIGIGFGPFLHSLGGGGRRPPSRGEWGSESSVRYHSERARILTL 60
           MRTTCTWTER YEASLF GIGFGPFL SLGG  RRPPS    GSE SVRYHS RARILTL
Sbjct: 237 MRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPS---GGSEPSVRYHSGRARILTL 296

Query: 61  YQDLRTKGQSQVDSFYGGVGLKVIEACKGLLGPDGDCPSSAKVEGSLTERPTRRVETKVG 120
            QDLR KGQSQ          KV EACKG LGPDGD PSSAK EGSLT RPTRR  TKVG
Sbjct: 297 CQDLRAKGQSQASQ-------KVTEACKGFLGPDGDWPSSAKAEGSLTARPTRRAGTKVG 356

Query: 121 LSDPTVPSEKAIAQWIK 138
           LSDPTVPS +A+AQ IK
Sbjct: 357 LSDPTVPSGRAVAQRIK 363

BLAST of Carg24679 vs. ExPASy TrEMBL
Match: A0A5N6NWN0 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_18043 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 2.7e-31
Identity = 83/125 (66.40%), Postives = 87/125 (69.60%), Query Frame = 0

Query: 24  PFLHSLGGGGRR---PPSRGE-----WGSESSVRYHSERARILTLYQDLRTKGQSQVDSF 83
           P   +L  GGR    P   GE      GSE SVRYHS RARILTL QD+R KGQSQVDSF
Sbjct: 5   PATEALVNGGRNYNGPKVEGEEGLLPGGSEPSVRYHSGRARILTLCQDIRAKGQSQVDSF 64

Query: 84  YGG-VGLKVIEACKGLLGPDGDCPSSAKVEGSLTERPTRRVETKVGLSDPTVPSEKAIAQ 140
           YG     KV EACKG LGPDGD P SAK EGSLT R TRR  TKV LSDPTVPS +A+AQ
Sbjct: 65  YGAYASQKVTEACKGFLGPDGDWPLSAKAEGSLTARSTRRAGTKVDLSDPTVPSGRAVAQ 124

BLAST of Carg24679 vs. ExPASy TrEMBL
Match: A0A5N6PUG6 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_04250 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-30
Identity = 81/139 (58.27%), Postives = 83/139 (59.71%), Query Frame = 0

Query: 1   MRTTCTWTERLYEASLFIGIGFGPFLHSLGGGGRRPPSRGEWGSESSVRYHSERARILTL 60
           MRTTCTWTER YEASLF GIGFGPFL SLGG  RRPPS                      
Sbjct: 1   MRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPS---------------------- 60

Query: 61  YQDLRTKGQSQVDSFYGGVGLKVIEACKGLLGPDGDCPSSAKVEGSLTERPTRRVETKVG 120
                           GG   KV EACKG LGPDGD PSSAK EGSLT RPTRR  TKV 
Sbjct: 61  ----------------GGASQKVTEACKGFLGPDGDWPSSAKAEGSLTARPTRRAGTKVS 101

Query: 121 LSDPTVPSEKAIAQWIKVT 140
           LSDPTVPS +A+AQ IKVT
Sbjct: 121 LSDPTVPSGRAVAQRIKVT 101

BLAST of Carg24679 vs. ExPASy TrEMBL
Match: A0A2J6K843 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_6X14541 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.0e-25
Identity = 75/139 (53.96%), Postives = 79/139 (56.83%), Query Frame = 0

Query: 1   MRTTCTWTERLYEASLFIGIGFGPFLHSLGGGGRRPPSRGEWGSESSVRYHSERARILTL 60
           MRTTCTWTER YEASLF GIGF  FL +LGG  RRPPS                      
Sbjct: 5   MRTTCTWTERPYEASLFPGIGFVLFLRNLGGRRRRPPS---------------------- 64

Query: 61  YQDLRTKGQSQVDSFYGGVGLKVIEACKGLLGPDGDCPSSAKVEGSLTERPTRRVETKVG 120
                           GG  LKV E CKG LG +GD PSSAK EGSLT R T R  TKVG
Sbjct: 65  ----------------GGASLKVTEVCKGFLGSNGDWPSSAKAEGSLTARHTLRAGTKVG 105

Query: 121 LSDPTVPSEKAIAQWIKVT 140
           LSDPTVPS +A+AQ IKVT
Sbjct: 125 LSDPTVPSGRAVAQQIKVT 105

BLAST of Carg24679 vs. ExPASy TrEMBL
Match: A0A5N6MLP8 (Uncharacterized protein ycf68 OS=Mikania micrantha OX=192012 GN=E3N88_30142 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.4e-24
Identity = 72/128 (56.25%), Postives = 74/128 (57.81%), Query Frame = 0

Query: 12  YEASLFIGIGFGPFLHSLGGGGRRPPSRGEWGSESSVRYHSERARILTLYQDLRTKGQSQ 71
           YEASLF GIGFGPFL SLGG  RRPPS                                 
Sbjct: 488 YEASLFPGIGFGPFLRSLGGRRRRPPS--------------------------------- 547

Query: 72  VDSFYGGVGLKVIEACKGLLGPDGDCPSSAKVEGSLTERPTRRVETKVGLSDPTVPSEKA 131
                GG   KV EACKG LGPDGD PSSAK EGSLT RPTRR  TKVGLSDPTVPS +A
Sbjct: 548 -----GGASQKVTEACKGFLGPDGDWPSSAKAEGSLTARPTRRAGTKVGLSDPTVPSGRA 577

Query: 132 IAQWIKVT 140
           +AQ IKVT
Sbjct: 608 VAQRIKVT 577

BLAST of Carg24679 vs. TAIR 10
Match: AT3G03170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits to 184 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 1.1e-05
Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0

Query: 174 RRGLSRYYSGKARSFACIADARCVEDLKKPTHPDAKKRKKHSDCKGIHVSPHHCRRAS 232
           RRGLS++Y GK++SF  +A+A  VEDL KP +P   K K+  +      SP HCRR S
Sbjct: 56  RRGLSKHYKGKSQSFTTLAEALTVEDLAKPENPFNAKLKQRRE------SP-HCRRLS 106

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7022280.15.8e-137100.00hypothetical protein SDJN02_16011, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG9438714.13.0e-3267.16hypothetical protein H6P81_021346 [Aristolochia fimbriata][more]
KAG6588432.15.1e-3289.87hypothetical protein SDJN03_16997, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAD5318097.15.6e-3166.40hypothetical protein E3N88_18043 [Mikania micrantha][more]
TKY72915.17.3e-3164.06hypothetical protein E2542_SST01661 [Spatholobus suberectus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6N2NAY59.6e-4575.18Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS480550 PE=4 SV=... [more]
A0A5N6NWN02.7e-3166.40Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_18043 PE=4 SV=1[more]
A0A5N6PUG61.3e-3058.27Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_04250 PE=4 SV=1[more]
A0A2J6K8431.0e-2553.96Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_6X14541 PE=4 SV=1[more]
A0A5N6MLP81.4e-2456.25Uncharacterized protein ycf68 OS=Mikania micrantha OX=192012 GN=E3N88_30142 PE=3... [more]
Match NameE-valueIdentityDescription
AT3G03170.11.1e-0548.28unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33172:SF38BNAA01G05330D PROTEINcoord: 171..235
NoneNo IPR availablePANTHERPTHR33172OS08G0516900 PROTEINcoord: 171..235

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24679-RACarg24679-RAmRNA