
Carg24679 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGAACTACCTGCACGTGGACAGAAAGACTCTACGAAGCTTCATTGTTCATTGGGATTGGCTTTGGGCCTTTCCTGCACAGCTTAGGTGGAGGGGGAAGAAGGCCCCCTTCCCGAGGGGAGTGGGGAAGCGAGTCATCAGTGAGATACCACTCTGAAAGAGCTAGAATTCTAACCTTGTATCAGGACCTACGGACCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGGCGTAGGCCTCAAGGTAATAGAGGCGTGCAAAGGTTTACTCGGGCCAGACGGAGATTGCCCCTCGAGTGCAAAGGTAGAAGGGAGCTTGACTGAAAGACCCACCCGTCGAGTAGAGACGAAAGTCGGCCTTAGTGATCCGACAGTGCCGAGTGAAAAGGCCATTGCTCAATGGATAAAAGTTACTGTTTTGAAAAATCATTGAAACATTTCTATTTAAAAATACTGAGTAAGTAACACTACTGTTGTGGACAGAAAATGCAATCACATGCAACATGGTTCATGGTGGAATCTACTTTTCATCACTATTATTTGGACTTTACTTTCTTTTTCGAATAGGATTGGACGTATATTACTTTTCTACGACATGATTCATGCATGAATTCACTATGTGGCTCCATATACGTACCTGTAGGCCTCACTATTAGCTAGCACGAATTAGCTAACCAAGGCGAAAACTGAAAATGACTCAAAAGCTGTGCGCAGACAGTCGAGCTGAAATACAAGCCAACTGTAAAGAGGCAACTAATGACGTCACACAGTGACTTGGGAGAGTCGATGTCACGTTGGTGCTAGGGAGGATGGCTCCGTACACACATCTAGGCCTTCGCTTGGACTACACCTCTACTGACATTGAGCTGGACAAACCGTCAAAATGTAGTTCAAACATGTGAGATGTTGTGTTTGTTATTTCAGTCCCGCTTCTAAGAGTTAAACATATTTTGTCCTCATAAAATTGTTCTAAACAAAGCACTCTTAATCTTAAAATTCCTATTTTCATGATCACTCTCATTCGAACGTGGTCACGATTCATTTATGTCTGTCTCTTTAAACCAGATGTCACGTATGTGTACGTGGAGTGGGAAATAACTGGTAATGATATTTCCCAATATATTTTTGGAAGCTTTTTCTCGAATGAAAATCATAATAATAATTATCTCGAATTTGATAGAAAATACTCCTGAAAACAAATGGACTAAATTTTGATTAAAGATGGAGATTAGACTCAAAATACACGAGGTTTTAACCTAATTTTTTACGAGTCAACAGACCATTCGTTCATATTTTCGAACATTTGAATTCAAAAACCATATTTTCGAAACTTGAACGATCGAACAAATGGATGTATAGGAGAAATTGATTCCGTTCCATTAATAAAATAGATTTTTTTTTATTTATTTATATTTTTTTTATTATTTTTTTTTTTTGTGGGAAAATGTTGTATAAATATTTGTGCGTGTTTAGCCACAAAGCCTCCCTCACTCTCTTAATTGAAGGAAATGAAAGATCAAGGAAATAACATGATGGCTTTTGATATGAGTTCTCTTGGGGCAAATCTTCCTCAAAAGTAAGCAATTTTGGCCTACTTTTTTTTGTTAGTTTAATACTTGTTTTACGTCGTTTTGAATGTATAATTACGAGATAGTAGGTTCGAGTTTTTCAATTTTGTTGTGTGACTATCGTGCAAGTATCATGTCGGAACGTTTAAAAAAAACGATGTGATATCTCACATTGGTTGAGGAGAGAACGAAACACCCTTCATAAGGGTGTAGAAACCTTTCCCTAACATACTCGTAATGGAGAAGTCGATAAGGGAAACCCCAAAACCCTTGAGGGGGAAGCTCGAAAGGGAAATCCCAAAAAGGATAGTATCTGGATGAACACCGATTCTACTGTATAACTCTGAAAGACACGTTTTTAAAGGTTTGAGGGTAAGCTCGAAAGGAAATTTTACATTACAAACATAATCTTCCTTTCACGTGGGAAATGAGAAACATAGCCAACGTAGATTACAGTCTTTTTACTATCGTATTTGCATACTCCTCTCGTAACTATTTTCTTTTTGGTTTCCTTTTACGTGGGTAATGAGAAACACAGCCAACGTAGATTACCGTCTTTTTAGTATCGTATTTGCATACTCCTCTCATAACTATTTTCTTTTTGTTTTTTTTTTTATATATATATATTTCATAACTATTTATATATATGACCCAATAACCCGAACTACCTAGATCACCCAATCAAACCCTAAAAATTAAGTTGGGTTAGCTTTTTTTCCTTTTTTCTTTTTTTCCCGGGGTTGGATTAAATTTTTGAAAAACTAAAAAATTCAGTTCGGTTTGTGGGTTAACTTTTTTTTGATTGAGTTAACTCGACCCACTCGAAAATAAGGTTACAACCCAACTCAACCCTATTTTTACGGAAGCGAAAAATATTTAACATTTGTAATCGATGTTAGTGAGACTTGTAAATATTTGATATTTGAATGGGTTGTATAGCTGACGTTGTGGAGTTGGAGTATAGGAGGGGATTGTCGAGGTACTATTCAGGAAAGGCGAGGTCGTTTGCTTGCATAGCGGATGCTCGATGTGTAGAAGACTTGAAGAAACCAACACATCCAGATGCGAAGAAAAGGAAGAAACATTCTGATTGCAAAGGAATTCATGTTTCTCCTCATCACTGTCGACGAGCTTCATCCACTCATTGTTCTATTCCCTTCTTTGCTTCATGA ATGCGAACTACCTGCACGTGGACAGAAAGACTCTACGAAGCTTCATTGTTCATTGGGATTGGCTTTGGGCCTTTCCTGCACAGCTTAGGTGGAGGGGGAAGAAGGCCCCCTTCCCGAGGGGAGTGGGGAAGCGAGTCATCAGTGAGATACCACTCTGAAAGAGCTAGAATTCTAACCTTGTATCAGGACCTACGGACCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGGCGTAGGCCTCAAGGTAATAGAGGCGTGCAAAGGTTTACTCGGGCCAGACGGAGATTGCCCCTCGAGTGCAAAGGTAGAAGGGAGCTTGACTGAAAGACCCACCCGTCGAGTAGAGACGAAAGTCGGCCTTAGTGATCCGACAGTGCCGAGTGAAAAGGCCATTGCTCAATGGATAAAAGTTACTACAGTCGAGCTGAAATACAAGCCAACTGTAAAGAGGCAACTAATGACGTCACACAGTGACTTGGGAGAGTCGATGTCACCTGACGTTGTGGAGTTGGAGTATAGGAGGGGATTGTCGAGGTACTATTCAGGAAAGGCGAGGTCGTTTGCTTGCATAGCGGATGCTCGATGTGTAGAAGACTTGAAGAAACCAACACATCCAGATGCGAAGAAAAGGAAGAAACATTCTGATTGCAAAGGAATTCATGTTTCTCCTCATCACTGTCGACGAGCTTCATCCACTCATTGTTCTATTCCCTTCTTTGCTTCATGA ATGCGAACTACCTGCACGTGGACAGAAAGACTCTACGAAGCTTCATTGTTCATTGGGATTGGCTTTGGGCCTTTCCTGCACAGCTTAGGTGGAGGGGGAAGAAGGCCCCCTTCCCGAGGGGAGTGGGGAAGCGAGTCATCAGTGAGATACCACTCTGAAAGAGCTAGAATTCTAACCTTGTATCAGGACCTACGGACCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGGCGTAGGCCTCAAGGTAATAGAGGCGTGCAAAGGTTTACTCGGGCCAGACGGAGATTGCCCCTCGAGTGCAAAGGTAGAAGGGAGCTTGACTGAAAGACCCACCCGTCGAGTAGAGACGAAAGTCGGCCTTAGTGATCCGACAGTGCCGAGTGAAAAGGCCATTGCTCAATGGATAAAAGTTACTACAGTCGAGCTGAAATACAAGCCAACTGTAAAGAGGCAACTAATGACGTCACACAGTGACTTGGGAGAGTCGATGTCACCTGACGTTGTGGAGTTGGAGTATAGGAGGGGATTGTCGAGGTACTATTCAGGAAAGGCGAGGTCGTTTGCTTGCATAGCGGATGCTCGATGTGTAGAAGACTTGAAGAAACCAACACATCCAGATGCGAAGAAAAGGAAGAAACATTCTGATTGCAAAGGAATTCATGTTTCTCCTCATCACTGTCGACGAGCTTCATCCACTCATTGTTCTATTCCCTTCTTTGCTTCATGA MRTTCTWTERLYEASLFIGIGFGPFLHSLGGGGRRPPSRGEWGSESSVRYHSERARILTLYQDLRTKGQSQVDSFYGGVGLKVIEACKGLLGPDGDCPSSAKVEGSLTERPTRRVETKVGLSDPTVPSEKAIAQWIKVTTVELKYKPTVKRQLMTSHSDLGESMSPDVVELEYRRGLSRYYSGKARSFACIADARCVEDLKKPTHPDAKKRKKHSDCKGIHVSPHHCRRASSTHCSIPFFAS Homology
BLAST of Carg24679 vs. NCBI nr
Match: KAG7022280.1 (hypothetical protein SDJN02_16011, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 497.7 bits (1280), Expect = 5.8e-137 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of Carg24679 vs. NCBI nr
Match: KAG9438714.1 (hypothetical protein H6P81_021346 [Aristolochia fimbriata]) HSP 1 Score: 149.8 bits (377), Expect = 3.0e-32 Identity = 90/134 (67.16%), Postives = 94/134 (70.15%), Query Frame = 0
BLAST of Carg24679 vs. NCBI nr
Match: KAG6588432.1 (hypothetical protein SDJN03_16997, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 149.1 bits (375), Expect = 5.1e-32 Identity = 71/79 (89.87%), Postives = 72/79 (91.14%), Query Frame = 0
BLAST of Carg24679 vs. NCBI nr
Match: KAD5318097.1 (hypothetical protein E3N88_18043 [Mikania micrantha]) HSP 1 Score: 145.6 bits (366), Expect = 5.6e-31 Identity = 83/125 (66.40%), Postives = 87/125 (69.60%), Query Frame = 0
BLAST of Carg24679 vs. NCBI nr
Match: TKY72915.1 (hypothetical protein E2542_SST01661 [Spatholobus suberectus]) HSP 1 Score: 145.2 bits (365), Expect = 7.3e-31 Identity = 82/128 (64.06%), Postives = 88/128 (68.75%), Query Frame = 0
BLAST of Carg24679 vs. ExPASy TrEMBL
Match: A0A6N2NAY5 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS480550 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 9.6e-45 Identity = 103/137 (75.18%), Postives = 105/137 (76.64%), Query Frame = 0
BLAST of Carg24679 vs. ExPASy TrEMBL
Match: A0A5N6NWN0 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_18043 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 2.7e-31 Identity = 83/125 (66.40%), Postives = 87/125 (69.60%), Query Frame = 0
BLAST of Carg24679 vs. ExPASy TrEMBL
Match: A0A5N6PUG6 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_04250 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 1.3e-30 Identity = 81/139 (58.27%), Postives = 83/139 (59.71%), Query Frame = 0
BLAST of Carg24679 vs. ExPASy TrEMBL
Match: A0A2J6K843 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_6X14541 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 1.0e-25 Identity = 75/139 (53.96%), Postives = 79/139 (56.83%), Query Frame = 0
BLAST of Carg24679 vs. ExPASy TrEMBL
Match: A0A5N6MLP8 (Uncharacterized protein ycf68 OS=Mikania micrantha OX=192012 GN=E3N88_30142 PE=3 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 1.4e-24 Identity = 72/128 (56.25%), Postives = 74/128 (57.81%), Query Frame = 0
BLAST of Carg24679 vs. TAIR 10
Match: AT3G03170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits to 184 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 1.1e-05 Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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