Carg24536 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24536
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein SAMBA isoform X2
Location	Carg_Chr19: 1648769 .. 1652213 (-)
RNA-Seq Expression	Carg24536
Synteny	Carg24536

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTATCTCATGTTTAAAAAATAAATGGTCATGTATATAAATCCTCGAAGCGCTTCAAATTGACAGCAGAAATTCAAAACCCTTATCTTCTCCAATCTCCATTGCTCAATTTTCCTCTCAGACCCCTTCGTTGCATTTGCTGTTTTCCTTGTTGCTAAACGTTGATCTGACTTCTGATTCCTGTACAGTTCTAGGGCTTACTTCATTCGAAATTTGGGATCGCAATGAATACCTCGTCGCCGGCTAATTCTTCCATTTCTACCACACCGGTTGCCGGAAGATGTACCACTAATGCCGCAATGTCTCTTGACGATTTTCGCTTCCCCGCCAATTTAGTTTCCCTACAAGAGCGCAAGGACGAGGCCATGAGCGGTTAGTTTCCTTTTGATCCTCCTTCTTAGCTCTTCGTTGTTCCAGCGATGTTCTTAAACTTGGGAATCTGATTCTGATTTTCCTGCTTCCTTAGGTATAAAATTTCTTTCAAGATCGTGTGTCAATGTTATTGATGTTTCTACTTTTGTTCTTGTAAATCAGTTCGTGTTGTTTTGTGCCATTTAGATTTCTTTAGGCCTTCATTTGATTGCTGGGGAACTGATTAACTGACGAAAATGCTATGTTCTTCCACCAATATACGACGAGAAACATGTAGTCGTCGGTGGACATAGATATACATACTGACTAAAAATTTGGATGGGGAAATAGGAACAAGGCTAGAAAATTTGAAAATACTCTTTTGAGTTTACGACATGGTAAGAGGTGTTGGATGATGAAAGTCCCACATCGGCTAATTTAGGGAATGATCATTGGTTTATAATCGAGGAATACTATCTCCATCGGTATGAGGCATTTTGGGGAAGCCCAAAGTAAAGACATGAGAGCTTATGCTCAAAGTGGACAATATCATTCAATTGTGGACAGTCGTGTTCGTCTAACATGGTATCAGAGCCATGCCCTAAACTTAGTCGTGCCAATAGATCAGTAAATCCTCAAATATCGAACAAAGCACTCCAAAAGAAAAGGAGTCAAGCCTAGGAGTAAAAAATGACTAAGACTCTATAGGAGCACTTTGTTCGAGGGGAGGTGTTGGATGATGAAAGTTCCACATCAGCTAATTTAGGGAATGATCATGGGTTTATAATCAAGAAATACTCTCTCCATTGGTATGAGACCTTTTGAGGAAGCCCAAAGCAACGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGACAGTCTAGTTAGAAGTTCTCTAACAAGAGGATCCAATTTCGTTCTTAGCCTCTGGCTTACTCTGTCATGAATGATGCGACTTCTAACTAGAACTTCAGAGAAGGGAGTGAATTTTTTAGTTGGTACTTGGTCGTTTAAAACATCATTGAAAATCAAAATCTAACTAGCCTTTAATGGAGTGAGTAACCAGATGGTTGTTGAGGATTCATGGAAGAGGAGTCCCACGTCGGCTAATTAAGGGGTTGATCATGGGTTTATAAGTAAGGAATACTATCTCCATTGATACGAGGCCTTTTGGAGAAGCCCAAAACAAACCCTCGAGAGCTTATGCTCAAAGTGGACAATATCATACCACTGTGAAGAGTCATTATTCCTAACAATGGTCTCTTCCCGACAAAAGAAAATGATTTTATGTGCCCTAATGGAGGTTTTTCTTTAATAAATTTCACCTTCATTTAGTATGAAGTAGCTTGAATTTACATAAAGACTTAAGAGGGAGATGATCCATTCTTATTCTTTCTCAATTTGTGAAGCATTTCCAGGTAAAATATAATATAGATCTTCTGTTGAAATGTTTTGATGTTTCCCACTTGTGTTATATTTGGGCGTTTGTTGATTAAGAGGGGTAGTGGATAAGAGTTTTAATTGAACATTATAATGTCTTTTTGCTATGCATTTTGGTTAATGAATGAAGCACTTCCTCTTGTAGTGAGTAAGGTTTGAATTATCTGTGCGTTGCAGCTCTTAAATCTAATATAATGGCTGCACTGAACAAGGAGGTCAAATCTCTGGATGATGATAACTGGATGTTTGAAGGTCCTCGCTCTCGTATCAACCTTATGTCACGACAAGGTCAACTATTCAACTAGATCTGACTTCCTCATTCTGCATTCTGCATTCTGCACTCTTATTTAACCTTCCTCCCCCTTGCTTGTTCACCGATGTATGTGATGCATACCGATGTAACAGTATAACCCTTGTATGCATCTTGACATGTGTGAGCATAGTCTGTCCTTTGAATTACATATGCAAAGAAGAAAATGCATATGTTGTAAGATCCCACGTCAGTCGAGGAGAACGAAGCATTCTTTATAAAGGTGTGGAAACCTCTCCCTAATGGACGCGTTTTAAAAACCTTCAGGAGAAGTTTGAAAGAGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGCTGTTACAAATAGTATTAGAGCCAGACAGGGGGTGGACATGAGACGGTGTGCTAGCAAGGACGCTGAGCCCCGAAGGGTGGTGGATTGGGGGGTTCCACATCGATTGGAGAAAGGAACGAGTGCCAGCGAGAATGCTAGGTCTAGAAGGGGGGTGGATTGTAAGATCTCATATTGGTTGGAGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAATCTCTCCTTAGTGTACTCGTTTTAAAAACCTTGAGGGAAAACCTGAAAAGGGAAGCCCAAAGAGGACAATATCTACTAGCGGTGAGCTTGGGCTGTTACAAATAGTATCAGACCCAGACACCGAACGATGTACCAACGAGGAGGTTGAGCCCCGAAGGAGGGTGTGCACGAGGCAGTGTGCCAGTGGACGCGTTTTAAAAATCTTGAGGAGGGAAAGCCCAAAGAGAACAATATTGCTAGCGGTGAGCTTGAGTTATTACACAAGTGCTTTAGGATTAGGATTAAATGAACGAATGATTTAAGATCTTTCCTCGATGTTGTGTGTAAGAGCTCTAGTGATGGATGTTTATTTTTCAGTTATTGATTTCAGTTGTTGAATGCAGCAATTGAGTTCAATGTTGTTTATGCAACTATTGCCATATACGCTTGACTACTCTACTTTTGCGGTTTCAAGGTGCTAATTGCCATGCAATTCCATATCAGGTGCTCATTTCCTCAAAAAGACAGAAGAGAAAACAAGATAATGGGCCAGCTTGATCATAATCTCAGTACAGTTCTTCAGTAGAGTTCTTCAGCCTCATTCCCACAATCCAATCAACTAATCCTTCTATTCTATTTTTAATTTTTCTTTAGCTGTTTAAGGGTTTGCAAATGCTTGTTCAAATCAAACCTTGCTTCACATGTTTGGATAATTTTTTTATCTTCCTCGTTTTTCTACTTATTTTTAAAACGTTTATACATCGAAAACATATATTTTGAAAGTTTAGAGATAAAAAAATATATATGTTCGAC

mRNA sequence

TGTATCTCATGTTTAAAAAATAAATGGTCATGTATATAAATCCTCGAAGCGCTTCAAATTGACAGCAGAAATTCAAAACCCTTATCTTCTCCAATCTCCATTGCTCAATTTTCCTCTCAGACCCCTTCGTTGCATTTGCTGTTTTCCTTGTTGCTAAACGTTGATCTGACTTCTGATTCCTGTACAGTTCTAGGGCTTACTTCATTCGAAATTTGGGATCGCAATGAATACCTCGTCGCCGGCTAATTCTTCCATTTCTACCACACCGGTTGCCGGAAGATGTACCACTAATGCCGCAATGTCTCTTGACGATTTTCGCTTCCCCGCCAATTTAGTTTCCCTACAAGAGCGCAAGGACGAGGCCATGAGCGCTCTTAAATCTAATATAATGGCTGCACTGAACAAGGAGGTCAAATCTCTGGATGATGATAACTGGATGTTTGAAGGTCCTCGCTCTCGTATCAACCTTATGTCACGACAAGGTGCTCATTTCCTCAAAAAGACAGAAGAGAAAACAAGATAATGGGCCAGCTTGATCATAATCTCAGTACAGTTCTTCAGTAGAGTTCTTCAGCCTCATTCCCACAATCCAATCAACTAATCCTTCTATTCTATTTTTAATTTTTCTTTAGCTGTTTAAGGGTTTGCAAATGCTTGTTCAAATCAAACCTTGCTTCACATGTTTGGATAATTTTTTTATCTTCCTCGTTTTTCTACTTATTTTTAAAACGTTTATACATCGAAAACATATATTTTGAAAGTTTAGAGATAAAAAAATATATATGTTCGAC

Coding sequence (CDS)

ATGAATACCTCGTCGCCGGCTAATTCTTCCATTTCTACCACACCGGTTGCCGGAAGATGTACCACTAATGCCGCAATGTCTCTTGACGATTTTCGCTTCCCCGCCAATTTAGTTTCCCTACAAGAGCGCAAGGACGAGGCCATGAGCGCTCTTAAATCTAATATAATGGCTGCACTGAACAAGGAGGTCAAATCTCTGGATGATGATAACTGGATGTTTGAAGGTCCTCGCTCTCGTATCAACCTTATGTCACGACAAGGTGCTCATTTCCTCAAAAAGACAGAAGAGAAAACAAGATAA

Protein sequence

MNTSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGAHFLKKTEEKTR

Homology

[Close]

BLAST of Carg24536 vs. NCBI nr
Match: XP_022963561.1 (protein SAMBA isoform X2 [Cucurbita moschata] >XP_023553752.1 protein SAMBA isoform X2 [Cucurbita pepo subsp. pepo] >KAG7011376.1 hypothetical protein SDJN02_26281 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 191.8 bits (486), Expect = 2.8e-45
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MNTSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN 60
           MNTSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN
Sbjct: 1   MNTSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN 60

Query: 61  KEVKSLDDDNWMFEGPRSRINLMSRQGAHFLKKTEEKTR 100
           KEVKSLDDDNWMFEGPRSRINLMSRQGAHFLKKTEEKTR
Sbjct: 61  KEVKSLDDDNWMFEGPRSRINLMSRQGAHFLKKTEEKTR 99

[Close]

BLAST of Carg24536 vs. NCBI nr
Match: KAG6571647.1 (Protein SAMBA, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189.9 bits (481), Expect = 1.1e-44
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MNTSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN 60
           MNTSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN
Sbjct: 1   MNTSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN 60

Query: 61  KEVKSLDDDNWMFEGPRSRINLMSRQGAHFLKKTEEKTR 100
           KEVKSLDDDNWMFEGPRSRINLMSRQGAHFLKK EEKTR
Sbjct: 61  KEVKSLDDDNWMFEGPRSRINLMSRQGAHFLKKAEEKTR 99

[Close]

BLAST of Carg24536 vs. NCBI nr
Match: XP_022967351.1 (protein SAMBA isoform X2 [Cucurbita maxima])

HSP 1 Score: 184.5 bits (467), Expect = 4.4e-43
Identity = 96/99 (96.97%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MNTSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN 60
           M TSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN
Sbjct: 1   MITSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN 60

Query: 61  KEVKSLDDDNWMFEGPRSRINLMSRQGAHFLKKTEEKTR 100
           KEVKSLDDDNWMFEGPRSRINL SRQG HFLKKTEEKTR
Sbjct: 61  KEVKSLDDDNWMFEGPRSRINLTSRQGGHFLKKTEEKTR 99

[Close]

BLAST of Carg24536 vs. NCBI nr
Match: XP_038888368.1 (protein SAMBA isoform X2 [Benincasa hispida])

HSP 1 Score: 176.8 bits (447), Expect = 9.3e-41
Identity = 90/99 (90.91%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MNTSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN 60
           MNTSSPANSSISTT VAGRC+TNAAMSLDDFRFPANL+S+ ERKDEAM+ALKSNIMAALN
Sbjct: 1   MNTSSPANSSISTTAVAGRCSTNAAMSLDDFRFPANLISVPERKDEAMTALKSNIMAALN 60

Query: 61  KEVKSLDDDNWMFEGPRSRINLMSRQGAHFLKKTEEKTR 100
           KEVKSLDDDNWMFEGPRSRINLMS+QG HFLKKTEEK R
Sbjct: 61  KEVKSLDDDNWMFEGPRSRINLMSQQGGHFLKKTEEKRR 99

[Close]

BLAST of Carg24536 vs. NCBI nr
Match: XP_022131248.1 (protein SAMBA isoform X2 [Momordica charantia])

HSP 1 Score: 171.8 bits (434), Expect = 3.0e-39
Identity = 88/99 (88.89%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 1   MNTSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN 60
           MN+SSPANSSISTT VAGRC+TNAAMS+DDFRFPANL+S+ ERKDEAMSALKSNIMAALN
Sbjct: 1   MNSSSPANSSISTTAVAGRCSTNAAMSVDDFRFPANLISIPERKDEAMSALKSNIMAALN 60

Query: 61  KEVKSLDDDNWMFEGPRSRINLMSRQGAHFLKKTEEKTR 100
           KEVKSLDDD+WMFEGPRSRINLMSRQG  FLKKTEEK R
Sbjct: 61  KEVKSLDDDSWMFEGPRSRINLMSRQGGSFLKKTEEKRR 99

[Close]

BLAST of Carg24536 vs. ExPASy Swiss-Prot
Match: Q9C613 (Protein SAMBA OS=Arabidopsis thaliana OX=3702 GN=SAMBA PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 9.1e-23
Identity = 59/97 (60.82%), Postives = 78/97 (80.41%), Query Frame = 0


Query: 1  MNTSSPANSSISTTPVA-GRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAAL 60
          MN +SPA+S +STT VA G  ++ AA  LDDF FP ++ S+QERKDEAM  LK+++M  L
Sbjct: 1  MNGASPAHSLVSTTAVAGGGGSSGAAAGLDDFHFPPDIPSMQERKDEAMRVLKADLMTEL 60

Query: 61 NKEVKSLDDDNWMFEGPRSRINLMSRQGAHFLKKTEE 97
          +KEVKSL++D+WMFEGPRSRI+L+SR+G +FLKK  E
Sbjct: 61 DKEVKSLEEDSWMFEGPRSRIHLISRRG-NFLKKGGE 96

[Close]

BLAST of Carg24536 vs. ExPASy TrEMBL
Match: A0A6J1HGF1 (protein SAMBA isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463853 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.3e-45
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MNTSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN 60
           MNTSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN
Sbjct: 1   MNTSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN 60

Query: 61  KEVKSLDDDNWMFEGPRSRINLMSRQGAHFLKKTEEKTR 100
           KEVKSLDDDNWMFEGPRSRINLMSRQGAHFLKKTEEKTR
Sbjct: 61  KEVKSLDDDNWMFEGPRSRINLMSRQGAHFLKKTEEKTR 99

[Close]

BLAST of Carg24536 vs. ExPASy TrEMBL
Match: A0A6J1HRR3 (protein SAMBA isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466897 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.2e-43
Identity = 96/99 (96.97%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MNTSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN 60
           M TSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN
Sbjct: 1   MITSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN 60

Query: 61  KEVKSLDDDNWMFEGPRSRINLMSRQGAHFLKKTEEKTR 100
           KEVKSLDDDNWMFEGPRSRINL SRQG HFLKKTEEKTR
Sbjct: 61  KEVKSLDDDNWMFEGPRSRINLTSRQGGHFLKKTEEKTR 99

[Close]

BLAST of Carg24536 vs. ExPASy TrEMBL
Match: A0A6J1BST3 (protein SAMBA isoform X2 OS=Momordica charantia OX=3673 GN=LOC111004506 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.4e-39
Identity = 88/99 (88.89%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 1   MNTSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN 60
           MN+SSPANSSISTT VAGRC+TNAAMS+DDFRFPANL+S+ ERKDEAMSALKSNIMAALN
Sbjct: 1   MNSSSPANSSISTTAVAGRCSTNAAMSVDDFRFPANLISIPERKDEAMSALKSNIMAALN 60

Query: 61  KEVKSLDDDNWMFEGPRSRINLMSRQGAHFLKKTEEKTR 100
           KEVKSLDDD+WMFEGPRSRINLMSRQG  FLKKTEEK R
Sbjct: 61  KEVKSLDDDSWMFEGPRSRINLMSRQGGSFLKKTEEKRR 99

[Close]

BLAST of Carg24536 vs. ExPASy TrEMBL
Match: A0A6J1HIC3 (protein SAMBA isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463853 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.5e-39
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  MNTSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN 60
          MNTSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN
Sbjct: 1  MNTSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN 60

Query: 61 KEVKSLDDDNWMFEGPRSRINLMSRQGAH 90
          KEVKSLDDDNWMFEGPRSRINLMSRQGA+
Sbjct: 61 KEVKSLDDDNWMFEGPRSRINLMSRQGAN 89

[Close]

BLAST of Carg24536 vs. ExPASy TrEMBL
Match: A0A0A0LK11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G901060 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 5.5e-39
Identity = 86/99 (86.87%), Postives = 93/99 (93.94%), Query Frame = 0


Query: 1   MNTSSPANSSISTTPVAGRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAALN 60
           MNT SPANSS+STT VAGRC+TNAA+SLDDFRFP+NL+S+ ERKDEAM+ALKSNIMAALN
Sbjct: 1   MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALN 60

Query: 61  KEVKSLDDDNWMFEGPRSRINLMSRQGAHFLKKTEEKTR 100
           KEVKSLDDDNWMFEGPRSRINLMSRQG  FLKKTEEK R
Sbjct: 61  KEVKSLDDDNWMFEGPRSRINLMSRQGGAFLKKTEEKRR 99

[Close]

BLAST of Carg24536 vs. TAIR 10
Match: AT1G32310.1 (unknown protein; Has 28 Blast hits to 28 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 107.5 bits (267), Expect = 6.4e-24
Identity = 59/97 (60.82%), Postives = 78/97 (80.41%), Query Frame = 0


Query: 1  MNTSSPANSSISTTPVA-GRCTTNAAMSLDDFRFPANLVSLQERKDEAMSALKSNIMAAL 60
          MN +SPA+S +STT VA G  ++ AA  LDDF FP ++ S+QERKDEAM  LK+++M  L
Sbjct: 1  MNGASPAHSLVSTTAVAGGGGSSGAAAGLDDFHFPPDIPSMQERKDEAMRVLKADLMTEL 60

Query: 61 NKEVKSLDDDNWMFEGPRSRINLMSRQGAHFLKKTEE 97
          +KEVKSL++D+WMFEGPRSRI+L+SR+G +FLKK  E
Sbjct: 61 DKEVKSLEEDSWMFEGPRSRIHLISRRG-NFLKKGGE 96

The following BLAST results are available for this feature:

BLAST of Carg24536 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963561.1	2.8e-45	100.00	protein SAMBA isoform X2 [Cucurbita moschata] >XP_023553752.1 protein SAMBA isof...	[more]
KAG6571647.1	1.1e-44	98.99	Protein SAMBA, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022967351.1	4.4e-43	96.97	protein SAMBA isoform X2 [Cucurbita maxima]	[more]
XP_038888368.1	9.3e-41	90.91	protein SAMBA isoform X2 [Benincasa hispida]	[more]
XP_022131248.1	3.0e-39	88.89	protein SAMBA isoform X2 [Momordica charantia]	[more]

BLAST of Carg24536 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C613	9.1e-23	60.82	Protein SAMBA OS=Arabidopsis thaliana OX=3702 GN=SAMBA PE=1 SV=1	[more]

BLAST of Carg24536 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HGF1	1.3e-45	100.00	protein SAMBA isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463853 PE=4 SV=1	[more]
A0A6J1HRR3	2.2e-43	96.97	protein SAMBA isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466897 PE=4 SV=1	[more]
A0A6J1BST3	1.4e-39	88.89	protein SAMBA isoform X2 OS=Momordica charantia OX=3673 GN=LOC111004506 PE=4 SV=...	[more]
A0A6J1HIC3	2.5e-39	98.88	protein SAMBA isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463853 PE=4 SV=1	[more]
A0A0A0LK11	5.5e-39	86.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G901060 PE=4 SV=1	[more]

BLAST of Carg24536 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32310.1	6.4e-24	60.82	unknown protein; Has 28 Blast hits to 28 proteins in 9 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037547	Protein SAMBA	PANTHER	PTHR37387	PROTEIN SAMBA	coord: 1..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24536-RA	Carg24536-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046621	negative regulation of organ growth
molecular_function	GO:0010997	anaphase-promoting complex binding