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Carg24465 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGTATTTTTGGCATCAATTTCATCTGAAGATTATGAACAAATGGCATCTGCCCTCATCCAAATGGGTGCCACGAATAATGACGTCAATGCTGTGGCCTTTGCCAGAGATCTTGGCTCCTTTTGGAATATGCTTTTATTTCATTCATTCAAATTAACTAAAAAAAAACATGTTAGTTTTCTAGAAGGTCATTAAAGTGAGGTAACATCTCTTCTTTTTTCATAAGAATATTCTCCATTTTTTGTCATAGTATATGAACAGAATTTAACAAAAGTATCCTAAATCAATTTGTTCTCATTGTATCAACGCAGGATTTGGATACTGAAATAGCGAGAGGAAGGAAAGATTCAACTGCTGTTGCTGCAAATATACTCGTAGACGAGAGGCAAATGAACAAACTTTTGTGTTCGTAGCCGACAAAGTTCATAAACTTCAGGGTACACAGTGCAGGTATGCTTTTGCATAGAACATCAGTCCTTAGTCTATATAATCAGAAAGTTTGTGTTTTAGAACCACGAGTATTGAATACTTCTGAATAATGATCACTAGTAAAATGGTCCTTCCTTGCAACTTGAGTTTTGTATTTTTCATTGAAGTCCTAAAATGAAGTAAGACTGAGAGCCTAGGAAAGAAGAATACATTCATGAACCTCTTGAACCATACATTAAGACAAGTTGCTAATTTGGACCACTTTTCTCTCC ATGGACGTATTTTTGGCATCAATTTCATCTGAAGATTATGAACAAATGGCATCTGCCCTCATCCAAATGGGTGCCACGAATAATGACGTCAATGCTGATTTGGATACTGAAATAGCGAGAGGAAGGAAAGATTCAACTGCTGTTGCTGCAAATATACTCGTAGACGAGAGGCAAATGAACAAACTTTTGTGTTCGTAGCCGACAAAGTTCATAAACTTCAGGGTACACAGTGCAGGTATGCTTTTGCATAGAACATCAGTCCTTAGTCTATATAATCAGAAAGTTTGTGTTTTAGAACCACGAGTATTGAATACTTCTGAATAATGATCACTAGTAAAATGGTCCTTCCTTGCAACTTGAGTTTTGTATTTTTCATTGAAGTCCTAAAATGAAGTAAGACTGAGAGCCTAGGAAAGAAGAATACATTCATGAACCTCTTGAACCATACATTAAGACAAGTTGCTAATTTGGACCACTTTTCTCTCC ATGGACGTATTTTTGGCATCAATTTCATCTGAAGATTATGAACAAATGGCATCTGCCCTCATCCAAATGGGTGCCACGAATAATGACGTCAATGCTGATTTGGATACTGAAATAGCGAGAGGAAGGAAAGATTCAACTGCTGTTGCTGCAAATATACTCGTAGACGAGAGGCAAATGAACAAACTTTTGTGTTCGTAG MDVFLASISSEDYEQMASALIQMGATNNDVNADLDTEIARGRKDSTAVAANILVDERQMNKLLCS Homology
BLAST of Carg24465 vs. NCBI nr
Match: KAG7030614.1 (putative aarF domain-containing protein kinase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 123.6 bits (309), Expect = 6.1e-25 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Carg24465 vs. NCBI nr
Match: XP_038892843.1 (uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic [Benincasa hispida]) HSP 1 Score: 88.6 bits (218), Expect = 2.2e-14 Identity = 55/82 (67.07%), Postives = 57/82 (69.51%), Query Frame = 0
BLAST of Carg24465 vs. NCBI nr
Match: XP_008456971.1 (PREDICTED: uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic [Cucumis melo] >KAA0067028.1 putative aarF domain-containing protein kinase [Cucumis melo var. makuwa] >TYK26264.1 putative aarF domain-containing protein kinase [Cucumis melo var. makuwa]) HSP 1 Score: 88.6 bits (218), Expect = 2.2e-14 Identity = 55/82 (67.07%), Postives = 57/82 (69.51%), Query Frame = 0
BLAST of Carg24465 vs. NCBI nr
Match: XP_004146430.1 (uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic [Cucumis sativus] >KAE8648057.1 hypothetical protein Csa_005856 [Cucumis sativus]) HSP 1 Score: 88.6 bits (218), Expect = 2.2e-14 Identity = 55/82 (67.07%), Postives = 57/82 (69.51%), Query Frame = 0
BLAST of Carg24465 vs. NCBI nr
Match: KAG6600867.1 (putative aarF domain-containing protein kinase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 88.2 bits (217), Expect = 2.8e-14 Identity = 52/67 (77.61%), Postives = 54/67 (80.60%), Query Frame = 0
BLAST of Carg24465 vs. ExPASy Swiss-Prot
Match: Q9ASX5 (Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g05200 PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 2.8e-12 Identity = 46/82 (56.10%), Postives = 56/82 (68.29%), Query Frame = 0
BLAST of Carg24465 vs. ExPASy TrEMBL
Match: A0A5D3DRP0 (Putative aarF domain-containing protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00290 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.1e-14 Identity = 55/82 (67.07%), Postives = 57/82 (69.51%), Query Frame = 0
BLAST of Carg24465 vs. ExPASy TrEMBL
Match: A0A0A0KMB7 (ABC1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G223110 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.1e-14 Identity = 55/82 (67.07%), Postives = 57/82 (69.51%), Query Frame = 0
BLAST of Carg24465 vs. ExPASy TrEMBL
Match: A0A1S3C5P7 (uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496762 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.1e-14 Identity = 55/82 (67.07%), Postives = 57/82 (69.51%), Query Frame = 0
BLAST of Carg24465 vs. ExPASy TrEMBL
Match: A0A6J1JGV2 (uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111484256 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.4e-14 Identity = 54/82 (65.85%), Postives = 57/82 (69.51%), Query Frame = 0
BLAST of Carg24465 vs. ExPASy TrEMBL
Match: A0A6J1FSC0 (uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447716 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.4e-14 Identity = 54/82 (65.85%), Postives = 57/82 (69.51%), Query Frame = 0
BLAST of Carg24465 vs. TAIR 10
Match: AT5G05200.1 (Protein kinase superfamily protein ) HSP 1 Score: 72.0 bits (175), Expect = 2.0e-13 Identity = 46/82 (56.10%), Postives = 56/82 (68.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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