Carg24459 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24459
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ubiquitin-fold modifier 1
Location	Carg_Chr04: 18293669 .. 18296153 (-)
RNA-Seq Expression	Carg24459
Synteny	Carg24459

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGGTGCTGGAGGCGGAAAGGTCTCCTTCAAAGTGACCCTCACCTCGGACCCTAAGCTCCCTTTCAAAGTGTTCGTAATCTTAAACCTTTGATCTTTCGTTTTTAGGGTTTTTCTCCCTGTTCAGACTTAAGATCCAATCTTACGGTCTTTCAATTTCCTTGACTCTCAGGTTTAGTGTTCCAGAGGCCGCGCCCTTCACCGCTGTCCTTAAATTTGCCGCTGAAGAATTTAAGGTGCCCCCGCAAACCAGCGCCATCATCACCAATGGTAATTGATTGCCTCCGTGTTGATTTGTTCCTTGAATTTTGATTCGATTGTGATTGGATTCTGCATGCGTGAAATGTCTTTTGTATTTAACAATTTGGGATCGGAAATCGCCGATTCAGGTAGTTCTAGAAACTAGAATTGGTATTGAGTTCCTGGCGCCCACAATAGCACGAAGCGTAAAGGCTTCTGAGAGAAACGAGTATCAGTCATTGTTATTATTGTTATCATTTATGAGTTCAATTGTGAGCCTAGAGATTCAGCCTCTGGGTGGAGGTATATGCCTTAACCTGTTGTGCTAGGCTTTGCCTGGCAGATAGGTTAGTATTAGTTTTAGAGCGCAATTTCTTATTCATCTTACCAAGAAAGTAATTACGTCCTTTCTTTTTGATGAAAAGTTGGGGTTTTCCCCATCAGAAACGTAAACTCTTCTTGAATCCTTCCACATTACTTCATTGATCGCGTGGTGTCAATCTGTATCCAAACCATATAACTATTGCTTATTTGAATTTTATTGCTCTGAAGATTCGAGTGTTAAAAGATCGCCAACAGTACTTGAATATGAGAAAAGTCGAATGTCATCGAACAAACTACTGCACGTTTGGAAATGTATTGGTTATCTTTGATGTTAGTTGAACTTTCCTACATTGTTCTTCATATTTTTTATCTTGTCATGAGATGTGCTAGTGATTCTTTTTTGTATTTTAGGTCAGAGAGATTCCTGTTCATAATAGTTTTTATTGTACTAATATGGAAGCTAAAGTACTTAGGCTTTTCTTCCCAGATAAAGAAAAACCAACACCTTTGAACTTGCAAATAGTTGAGCTTATTTGCAACTGCTGGGTGCTTGAGCTAGCTATTTAGTTGCCTCATGATTTCACTGAAATCTTTCGGAAGAAGGGTCGGAGGTTGTGCTTTAGGATTTGTAAACTATGAGATGTGGACCGTGGTTGTAGGTGTTAGTGTGAGATCACACATCGGTTGGAGAGAAAAACAAAACATTCCTCGTAAGGGTGTGGAAACCTCTCCCTAACATACGCGTTTTAAAAACCGTGAGGTTGATGGCGATACGTAACGGGTTGAAATGGACAATATCTATTAGCGGTGGGGTTGGACTATTACAGTTAGATACTCTTTGCACGATTCTTTTTATGGGGAAAATATCTAAGAATCCGATACAAGCACAACATTTCCCTTGTAGAGACTATTTTACGGGCCATATAACGGTCCTTGGATTCACACTGCACATATGCTTTTAGATGCACTGATATTATCATTTTCGTTTCAGCCATTTAGCCTCTCATTTTAGGTGTTAACATTTGTCGTATGCCTTACAGATGGCGTTGGAATCAACCCTCAGCAAAGTGCTGGTAAGCTAAGTCATGGTTCTATTCTTAAGCTCTACAATTTATTGTCCATTCTTCTGTTCTGCTTATTCTTCTTGTTATTCAAGTTTTCCAACCATAGAAGCATATGCTGAACTGTTTTACGTGGAGAAAAAAAAAAAAAAACAATTGATATATGGATGGGGTAAATAATGTGAGATCCCACGTCGATTGGAGAGGGGAATAGAATACTATTTATAAGGGTGTAGAAACCTCTCCCTAGCAAACACGTTTTAAAAACTTTGAGAGGAGCTCGAAAGGGAAGCTCAAAGAGGACAATATTTTTCTAGCAGTGAGCTTGGGCTGTTATAGATATTGGTGTTTCATGAGCCAAAGGCACCGCCATTGCCCGAAAGCTAAAACATAACAATTGATGTTTTCTTCTTTAACGCCCATCGCAAATGTTAAGAACCTTACCTTTGAAACTCGAAATCAGATTGTTTTTTTCTTTTATTCTTCCCGGATTACATCCTGCGCCGGGTGCTTCCTCAAGCATGAGATACATTTTGTGTTTGTTCTAAATTTTAACATATTGGTCGATATTGCCATAAACTTTTACATATTCCTACTGCCAAACAGCCTACAATTGTGGCCATAATATTCCATTTGAAGCTGAAATTTATGGTTGATGTGCTTTTTGCAGGCAATGTCTTCCTCAAGCACGGCTCTGAACTACGCCTGATTCCTCGTGATAGAGTCGGAGCTGCTGGATCTATGAGAATGTAAACTACAATACTCGCCTTAGTCAACTGGCTCCACACTTTTTTTTATCACATTACTGCAATTGATGAGATGAGAACCAATGTCTGCTTATCCTTTCGATTTCACTAG

mRNA sequence

ATGGCGGGTGCTGGAGGCGGAAAGGTCTCCTTCAAAGTGACCCTCACCTCGGACCCTAAGCTCCCTTTCAAAGTGTTTAGTGTTCCAGAGGCCGCGCCCTTCACCGCTGTCCTTAAATTTGCCGCTGAAGAATTTAAGGTGCCCCCGCAAACCAGCGCCATCATCACCAATGATGGCGTTGGAATCAACCCTCAGCAAAGTGCTGGCAATGTCTTCCTCAAGCACGGCTCTGAACTACGCCTGATTCCTCGTGATAGAGTCGGAGCTGCTGGATCTATGAGAATGTAAACTACAATACTCGCCTTAGTCAACTGGCTCCACACTTTTTTTTATCACATTACTGCAATTGATGAGATGAGAACCAATGTCTGCTTATCCTTTCGATTTCACTAG

Coding sequence (CDS)

ATGGCGGGTGCTGGAGGCGGAAAGGTCTCCTTCAAAGTGACCCTCACCTCGGACCCTAAGCTCCCTTTCAAAGTGTTTAGTGTTCCAGAGGCCGCGCCCTTCACCGCTGTCCTTAAATTTGCCGCTGAAGAATTTAAGGTGCCCCCGCAAACCAGCGCCATCATCACCAATGATGGCGTTGGAATCAACCCTCAGCAAAGTGCTGGCAATGTCTTCCTCAAGCACGGCTCTGAACTACGCCTGATTCCTCGTGATAGAGTCGGAGCTGCTGGATCTATGAGAATGTAA

Protein sequence

MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM

Homology

[Close]

BLAST of Carg24459 vs. NCBI nr
Match: XP_023547732.1 (ubiquitin-fold modifier 1-like [Cucurbita pepo subsp. pepo] >KAG6602076.1 Ubiquitin-fold modifier 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032781.1 Ubiquitin-fold modifier 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 188.7 bits (478), Expect = 2.3e-44
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60
          MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV
Sbjct: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60

Query: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM 96
          GINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM
Sbjct: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM 95

[Close]

BLAST of Carg24459 vs. NCBI nr
Match: XP_022141697.1 (ubiquitin-fold modifier 1 [Momordica charantia])

HSP 1 Score: 185.3 bits (469), Expect = 2.5e-43
Identity = 92/95 (96.84%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60
          MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV
Sbjct: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60

Query: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM 96
          GINPQQSAGNVFLKHGSELRLIPRDRVGA+G++RM
Sbjct: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGASGALRM 95

[Close]

BLAST of Carg24459 vs. NCBI nr
Match: XP_022990075.1 (ubiquitin-fold modifier 1-like [Cucurbita maxima])

HSP 1 Score: 179.9 bits (455), Expect = 1.1e-41
Identity = 90/91 (98.90%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60
          MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV
Sbjct: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60

Query: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAAG 92
          GINPQQSAGNVFLKHGSELRLIPRDRVGA G
Sbjct: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGATG 91

[Close]

BLAST of Carg24459 vs. NCBI nr
Match: XP_004140331.1 (ubiquitin-fold modifier 1 [Cucumis sativus] >XP_008465795.1 PREDICTED: ubiquitin-fold modifier 1 [Cucumis melo] >XP_022939161.1 ubiquitin-fold modifier 1 [Cucurbita moschata] >XP_022993821.1 ubiquitin-fold modifier 1 [Cucurbita maxima] >XP_023550471.1 ubiquitin-fold modifier 1 [Cucurbita pepo subsp. pepo] >XP_038906934.1 ubiquitin-fold modifier 1 [Benincasa hispida] >KAG6578985.1 Ubiquitin-fold modifier 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016510.1 Ubiquitin-fold modifier 1 [Cucurbita argyrosperma subsp. argyrosperma] >KGN50966.1 hypothetical protein Csa_009305 [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 1.8e-41
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60
          MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV
Sbjct: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60

Query: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAA 91
          GINPQQSAGNVFLKHGSELRLIPRDRVGAA
Sbjct: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAA 90

[Close]

BLAST of Carg24459 vs. NCBI nr
Match: GAV76212.1 (Thaumatin domain-containing protein/Ufm1 domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 178.3 bits (451), Expect = 3.1e-41
Identity = 88/92 (95.65%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 3   GAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGI 62
           G GGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGI
Sbjct: 296 GGGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGI 355

Query: 63  NPQQSAGNVFLKHGSELRLIPRDRVGAAGSMR 95
           NPQQSAGNVFLKHGSELRLIPRDRVGA+GS++
Sbjct: 356 NPQQSAGNVFLKHGSELRLIPRDRVGASGSLK 387

[Close]

BLAST of Carg24459 vs. ExPASy Swiss-Prot
Match: Q94DM8 (Ubiquitin-fold modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0962400 PE=3 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 2.4e-41
Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 0


Query: 4  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGIN 63
          AGGGKVSFK+ LTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGIN
Sbjct: 12 AGGGKVSFKIILTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGIN 71

Query: 64 PQQSAGNVFLKHGSELRLIPRDRVGA 90
          PQQSAGNVFLKHGSELRLIPRDRVGA
Sbjct: 72 PQQSAGNVFLKHGSELRLIPRDRVGA 97

[Close]

BLAST of Carg24459 vs. ExPASy Swiss-Prot
Match: Q9CA23 (Ubiquitin-fold modifier 1 OS=Arabidopsis thaliana OX=3702 GN=At1g77710 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.2e-40
Identity = 83/86 (96.51%), Postives = 84/86 (97.67%), Query Frame = 0


Query: 4  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGIN 63
          A GGKVSFKVTLTSDPKLPFKVFSVPE APFTAVLKFAAEEFKVPPQTSAIITNDG+GIN
Sbjct: 2  ATGGKVSFKVTLTSDPKLPFKVFSVPEGAPFTAVLKFAAEEFKVPPQTSAIITNDGIGIN 61

Query: 64 PQQSAGNVFLKHGSELRLIPRDRVGA 90
          PQQSAGNVFLKHGSELRLIPRDRVGA
Sbjct: 62 PQQSAGNVFLKHGSELRLIPRDRVGA 87

[Close]

BLAST of Carg24459 vs. ExPASy Swiss-Prot
Match: Q5PU89 (Ubiquitin-fold modifier 1 OS=Chlamydomonas incerta OX=51695 GN=PR46a PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.8e-37
Identity = 78/90 (86.67%), Postives = 82/90 (91.11%), Query Frame = 0


Query: 5  GGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINP 64
          G  KV+FKVTLTSDPKLPF+VFSVPE APFTAVLKFAAEEFKVP QTSAIITNDGVGINP
Sbjct: 10 GVTKVTFKVTLTSDPKLPFRVFSVPEEAPFTAVLKFAAEEFKVPAQTSAIITNDGVGINP 69

Query: 65 QQSAGNVFLKHGSELRLIPRDRVGAAGSMR 95
          QQ+AGNVFLKHGSELRLIPRDRVG +   R
Sbjct: 70 QQTAGNVFLKHGSELRLIPRDRVGGSSLAR 99

[Close]

BLAST of Carg24459 vs. ExPASy Swiss-Prot
Match: Q94EY2 (Ubiquitin-fold modifier 1 OS=Chlamydomonas reinhardtii OX=3055 GN=PR46a PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.1e-36
Identity = 77/87 (88.51%), Postives = 79/87 (90.80%), Query Frame = 0


Query: 8  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQS 67
          KV+FKVTLTSDPKLPF+VFSVPE APFTAVLKFAAEEFKVP QTSAIITNDGVGINPQQ 
Sbjct: 10 KVTFKVTLTSDPKLPFRVFSVPEEAPFTAVLKFAAEEFKVPAQTSAIITNDGVGINPQQI 69

Query: 68 AGNVFLKHGSELRLIPRDRVGAAGSMR 95
          AGNVFLKHGSELRLIPRDRVG     R
Sbjct: 70 AGNVFLKHGSELRLIPRDRVGGISRAR 96

[Close]

BLAST of Carg24459 vs. ExPASy Swiss-Prot
Match: Q176V0 (Ubiquitin-fold modifier 1 OS=Aedes aegypti OX=7159 GN=AAEL006251 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 4.0e-36
Identity = 73/82 (89.02%), Postives = 79/82 (96.34%), Query Frame = 0


Query: 8  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQS 67
          KV+FK+TLTSDPKLPFKV SVPEA PFTAVLKFAAEEFKVPP TSAIIT+DG+GINPQQ+
Sbjct: 4  KVTFKITLTSDPKLPFKVLSVPEATPFTAVLKFAAEEFKVPPATSAIITDDGIGINPQQT 63

Query: 68 AGNVFLKHGSELRLIPRDRVGA 90
          AGNVFLKHGSELRLIPRDRVG+
Sbjct: 64 AGNVFLKHGSELRLIPRDRVGS 85

[Close]

BLAST of Carg24459 vs. ExPASy TrEMBL
Match: A0A6J1CKK3 (Ubiquitin-fold modifier 1 OS=Momordica charantia OX=3673 GN=LOC111011996 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.2e-43
Identity = 92/95 (96.84%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60
          MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV
Sbjct: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60

Query: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM 96
          GINPQQSAGNVFLKHGSELRLIPRDRVGA+G++RM
Sbjct: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGASGALRM 95

[Close]

BLAST of Carg24459 vs. ExPASy TrEMBL
Match: A0A6J1JP49 (Ubiquitin-fold modifier 1 OS=Cucurbita maxima OX=3661 GN=LOC111487080 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.1e-42
Identity = 90/91 (98.90%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60
          MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV
Sbjct: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60

Query: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAAG 92
          GINPQQSAGNVFLKHGSELRLIPRDRVGA G
Sbjct: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGATG 91

[Close]

BLAST of Carg24459 vs. ExPASy TrEMBL
Match: A0A6J1JXE3 (Ubiquitin-fold modifier 1 OS=Cucurbita maxima OX=3661 GN=LOC111489715 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 8.7e-42
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60
          MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV
Sbjct: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60

Query: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAA 91
          GINPQQSAGNVFLKHGSELRLIPRDRVGAA
Sbjct: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAA 90

[Close]

BLAST of Carg24459 vs. ExPASy TrEMBL
Match: A0A0A0KTD7 (Ubiquitin-fold modifier 1 OS=Cucumis sativus OX=3659 GN=Csa_5G374760 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 8.7e-42
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60
          MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV
Sbjct: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60

Query: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAA 91
          GINPQQSAGNVFLKHGSELRLIPRDRVGAA
Sbjct: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAA 90

[Close]

BLAST of Carg24459 vs. ExPASy TrEMBL
Match: A0A6J1FF53 (Ubiquitin-fold modifier 1 OS=Cucurbita moschata OX=3662 GN=LOC111445155 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 8.7e-42
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60
          MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV
Sbjct: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60

Query: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAA 91
          GINPQQSAGNVFLKHGSELRLIPRDRVGAA
Sbjct: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAA 90

[Close]

BLAST of Carg24459 vs. TAIR 10
Match: AT1G77710.1 (CONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1 (InterPro:IPR005375); Has 244 Blast hits to 244 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). )

HSP 1 Score: 166.8 bits (421), Expect = 8.6e-42
Identity = 83/86 (96.51%), Postives = 84/86 (97.67%), Query Frame = 0


Query: 4  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGIN 63
          A GGKVSFKVTLTSDPKLPFKVFSVPE APFTAVLKFAAEEFKVPPQTSAIITNDG+GIN
Sbjct: 2  ATGGKVSFKVTLTSDPKLPFKVFSVPEGAPFTAVLKFAAEEFKVPPQTSAIITNDGIGIN 61

Query: 64 PQQSAGNVFLKHGSELRLIPRDRVGA 90
          PQQSAGNVFLKHGSELRLIPRDRVGA
Sbjct: 62 PQQSAGNVFLKHGSELRLIPRDRVGA 87

The following BLAST results are available for this feature:

BLAST of Carg24459 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547732.1	2.3e-44	100.00	ubiquitin-fold modifier 1-like [Cucurbita pepo subsp. pepo] >KAG6602076.1 Ubiqui...	[more]
XP_022141697.1	2.5e-43	96.84	ubiquitin-fold modifier 1 [Momordica charantia]	[more]
XP_022990075.1	1.1e-41	98.90	ubiquitin-fold modifier 1-like [Cucurbita maxima]	[more]
XP_004140331.1	1.8e-41	100.00	ubiquitin-fold modifier 1 [Cucumis sativus] >XP_008465795.1 PREDICTED: ubiquitin...	[more]
GAV76212.1	3.1e-41	95.65	Thaumatin domain-containing protein/Ufm1 domain-containing protein [Cephalotus f...	[more]

BLAST of Carg24459 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94DM8	2.4e-41	97.67	Ubiquitin-fold modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g09624...	[more]
Q9CA23	1.2e-40	96.51	Ubiquitin-fold modifier 1 OS=Arabidopsis thaliana OX=3702 GN=At1g77710 PE=1 SV=1	[more]
Q5PU89	4.8e-37	86.67	Ubiquitin-fold modifier 1 OS=Chlamydomonas incerta OX=51695 GN=PR46a PE=3 SV=1	[more]
Q94EY2	1.1e-36	88.51	Ubiquitin-fold modifier 1 OS=Chlamydomonas reinhardtii OX=3055 GN=PR46a PE=3 SV=...	[more]
Q176V0	4.0e-36	89.02	Ubiquitin-fold modifier 1 OS=Aedes aegypti OX=7159 GN=AAEL006251 PE=3 SV=1	[more]

BLAST of Carg24459 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CKK3	1.2e-43	96.84	Ubiquitin-fold modifier 1 OS=Momordica charantia OX=3673 GN=LOC111011996 PE=3 SV...	[more]
A0A6J1JP49	5.1e-42	98.90	Ubiquitin-fold modifier 1 OS=Cucurbita maxima OX=3661 GN=LOC111487080 PE=3 SV=1	[more]
A0A6J1JXE3	8.7e-42	100.00	Ubiquitin-fold modifier 1 OS=Cucurbita maxima OX=3661 GN=LOC111489715 PE=3 SV=1	[more]
A0A0A0KTD7	8.7e-42	100.00	Ubiquitin-fold modifier 1 OS=Cucumis sativus OX=3659 GN=Csa_5G374760 PE=3 SV=1	[more]
A0A6J1FF53	8.7e-42	100.00	Ubiquitin-fold modifier 1 OS=Cucurbita moschata OX=3662 GN=LOC111445155 PE=3 SV=...	[more]

BLAST of Carg24459 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77710.1	8.6e-42	96.51	CONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1 (InterPro:IPR005375); Has 244 B...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005375	Ubiquitin-fold modifier 1	PIRSF	PIRSF038027	Ufm1	coord: 1..90 e-value: 3.3E-47 score: 156.4
IPR005375	Ubiquitin-fold modifier 1	PFAM	PF03671	Ufm1	coord: 8..82 e-value: 6.7E-43 score: 144.5
IPR005375	Ubiquitin-fold modifier 1	PANTHER	PTHR15825	UBIQUITIN-FOLD MODIFIER 1	coord: 5..91
None	No IPR available	GENE3D	3.10.20.90		coord: 6..89 e-value: 3.2E-51 score: 173.2
None	No IPR available	PANTHER	PTHR15825:SF1	UBIQUITIN-FOLD MODIFIER 1	coord: 5..91
None	No IPR available	CDD	cd01766	Ubl_UFM1	coord: 9..83 e-value: 1.64177E-53 score: 159.147
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 5..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24459-RA	Carg24459-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1990592	protein K69-linked ufmylation
biological_process	GO:0071569	protein ufmylation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus