Carg24250 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg24250
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAutophagy protein 5
LocationCarg_Chr14: 4673432 .. 4683570 (+)
RNA-Seq ExpressionCarg24250
SyntenyCarg24250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAGAAGAAGAAGAAGAAGAAGCAGAAGGGAGGGAGAGAGAGAGAGACAGAGAGAGGGGGCATGGAAGCACTGAGGTACATCTGGGAAGGTGCAATTCCATTACAGATTCATCTCCATGAGTCTGAAGTCACCACCATCCCTCCTCCGCCGCCTGCAATGGTATTTCTCTGTTTCCTCCCTTCGCTGCTGCACTTTCCCTTTTCTAACTATCAAATTTCCGGCTCTCAATTTGATCAACAGATGAATATCATGGCCTCATTCTGTTTATTTATCTCTTTTCCTCTGGGAAATTTGACTTTTTTTTTCTTTACAAGGGTTGTTTGTATTTCCTGCTTCTTTGTGTTTTTCAATCTGAAGTTTTGAATAAGGGATGATTTTACGTGTCTACTGTACCCCAAGTACATCGATCTTTGATTGAACTGAATCGAATTGCTTTCCATGTGGAATTTGTATTTTGATCTACTTTAGGTCTTGGCTCCTCGGATTGGCTACTTGCCTCTGTTGGCTTCTCAGATTAAACCTTACTTCAGTAGTACGCTTCCTCCTGGAGTGGACACCATTTGGTTTGAGTACAAGGGTTTGCCCCTTAAATGGTACGCTCTTCTTTTCTCTTTTAAATTTCATCTTTGTTAATGGTTTCTTCGAATTTTGTAGATCAGTTTGAGTTTTCTTTAATAATCTACTACTATTCTCTGTTTTTGTTACTACGACACCGCTCTTCTCCGTCATTCTATGTCTCTTGGGGTTGTACTTCTGGCTGTCTTGTATAACTGTTCTTGCTATTTTTTCGCTTTTGATAAAACTCTTTCTTTCTCTTATTGCGTATGTCTCACAAGGTACACGGAGAGGAAAGCTGAAAATTGAAACGTGTTAAATTAATAATATGTACTATGTTTTAGTAGGAAGGACTTCCGTTTATTATTGAAGACTATAGAAAGAAGAAATAGGATAAGATATTCATCTCAACCTAGTGATTTAGAATGGAAGAAGATGATAGACATTCATGATAAAGGAAAATGGTTGAAGGGAAACAATTTCATAGGTAAAGCAAAAGAAATGAGAGGGAAGGAGAGCCTTCACCAAGACTAAGGTGTGTTATATCTGTTAAAGCATGATTACTAAAAGTTTTGTTAAGTCTACACCATCAAGTTGCTGTCTAAAGGACGTGATCCCCAAGAAAGGGGGAAGTTTTCCCCAAACACCAAGACTAAGGTGTGTTATATCCATTAGAAACTTGTGATGAAACTGATCCATAGAAAGTTAACCTATTCCTTGGAGGGACAGTTTTGTAGGAGGGAGTGAGGCTTAACATGACTATAGTTCAATTGGTTAAGGTATATGCCCTCGGCCAAGAGGTTAGCTCCGTCCTGCGTTTTGTTGAACTACGAAGGAGGGAGTGAGATTGAAACTAATGTCTTTATCACATGGATGATAGCAAAAGTAGGTTGTAATAGGATTCCACATGGTGGTGACGAATTGGCAATGAACAAAAATGTGGTATTACTGTTTTGAGGTCCTTTTGCAAAGACCAAACCAATTAGGGGAGAGAGCTGGATGCAGATTCCTCCTCTGAATTTTGTCATGGTGTTGCTGTTGTTTAGACTTCAGAGCAATTTCCTTAATGAAGATCACCAAATTGCCTTGCAAAAATTAGAATTGAATAATTTCCTATCGATGTTAGGCCTTTGGGAAGAGACTTGCACGTTGAATATCCTGAAAGGTAAAAATTTCAAGACCATTAATCTGGGGAATTGGAGGAGGATCAACCTTAAATATGTCACGAAGGAGAGAGTCCATCTGCAAAGTCCTTGCCATTAGAATTTCTTGTGAGCAAATTCCAAATCAAAAGTTCATTGACTAAATTTGGGCAACTATCGTATTTGAATCGACACAAGGGGCATAAAGTTGTGGGTAGAGGAAGCAAGGGAGGTATTACCTCTCCAAGGGTCTTGATACAACAACACTAAGAGCTTTGGTGTAGGAAACATCCCAACCATGAACCTCAACATTTTCGTATCAATACAAAAAAAAAAAAACCTACGAAAATGTTAGAAACATATTACTTTATGGTTTATGATGAAAAGATTAGAGAATTCATTCTTATCTCAGGTTTCAAACAGTTCACAAGTTTGGTAACCAAACTTGAATGTTTGAAGATATGCAATCTTAACACTAGGCTTGCAAAGGGAACTGACACTCTGTTGTGTCAAGAAAAGTAATCAAATATCGTTCATCATCAATGTCTAAGAAGAACATGACATTCCTTGGGTTTATATAACCAAGGGTGAAAAATATGGAGAATCTAAAGACCCTAGAGCTTGAAAATCCTAAATAATAAAGGGATAATTAAAAAATTATTCTAAAAATGGGAATTGTAAGATAATTGACAATTGATCCATCTAACTTTCATTCCTAAGAATCATACATCCAGTTAAAATTGCAAAAATTGAAAGAAGCAAAATTCTTCGGGAAGGAGGCAAGGTTGGCAACAAGACAATATACATGGGCGTAAGAGTGGTGCACGACAAGCAGCTGGTGGGCGTGCATCTAGGTCATCGTTGATCAACATGGGTGTCGGGCAACATGTCTAGGGCATTAAGGCAGCATGCAAAGACACAAGTTGTTGCAAGGCAGGGTCTAGACAAAGGGCGCATGGCCGTGAGTGCATGCTGGCTTGTGCTGATAGGCCTAGGTGGGCATGGGCTTCCTTTATGGGTGCACAATGATGGGTTGTGTGAGGAAAACACTGATGGGCTATGGAGACCAGGGGTGCATGGGTGGGAGCACTGGGCCATGCAGATAGATTGTTTGACACCAATGGTCCGGGCATGTGGATGAACTTATGGTTGAGTAGTGTAGGGCATCAGGTTTGCTCCCCAGAGGTTTTTTGTGGGCTTTCTTTTGCGATGGCATATTGAGCTTAATAGGTGGTTTCCAACTTTCGAGCCAGCTACTTGCAATCTTGGATCTTCTTGATGTGGTCAAGGCAATGGTCTAAGACCATTGTCAAAAGAATAGGAAACTCAGTATGAGATTAGCTTTTTGGTTTTCCAAAGGACTTTCGAGTGCTTGGTGTCATTCGGTGACTAGTTGCTAGGAGAAGGCCCAAATTTAGCTTTTAATGTTTTTTTTTTTTGAAAGTGAGCATTTTTTTCGTGAGTATAATGGTATGCCAATAGACCGACACTTTTGAATTGACATAAAATAAAAAGGCGAATTAGAGGCGCTAAAGTAAATAAGCTCCCAAGATTTCAGAAAGTATCTTTGAATCTTTCCTCTCCTGAAAATTTATTTATTTATCTCAAGTCAAATCTGTCTAATGGAAAGAAAAAAGAAGGTAGTAATTCTTAATATTTTTTGGCTCCTTTAATTATTATATTTATTGTTTTTAGTGGAGAAATAGAAGTTATAAGATGATTTTATAGATATTTGTTTCAAATGGTCTATAACTGCATAGGGCTGTAACTAGAAGAACAAGAGTGTTTAAGCTGGTAATAGAAAATAATAAATTGAGATTGCGCAAGTGGATTCTTGGCTAATTTCTTTGACTTAATTGTCAGTTTAGTTTGACAACAATATTTCCATAGTCATTTAGTATGTCAGGATTTCGCCTTTTAGAAGATTATAGTTTTACTAATTTATTCAGAATTAACAGTCCTGGCAAAAAATTGTGTTGCTCATGATAGAATCTGGTGCATTCTTCTCAGGCATATACCGACTGGTGTACTGTTTGACCTTCTATGTGCAGAACCAGAAAGACCGTGGAATCTAACGGTTCAAATTCTATCTCTTTATCTTTATAGTTCAAGCTGCTATATTTTTATTGTATCTGACACCCATTTTCCTTTAAATTTAGTAAAAAATTCATTTATACTCCTAAACTTACTTTGGGTTATATAAATTAAAACTACAAACTAATAATTGAATCAATTTAAATCCTAAACTTTCAAAAGTAAATCAATTCAGACCCTCCATTAGTGGTTTTTAACTTTTTCACTTTATTCTATTTAAAATGAATTCAAAATCACCTAAATAAAAATATTATTCTCTCAAAATCCTACCAAAAGTAATAAGAAAAATTTATCCCATAGTTCTTTTTAAATAGGTATAAAAATTGAGGAAAAAGAAAATATGATAAACTACTCATATTAATGAAAACCACTACCATTCATTTGATTTTAGCATTCTTTCTAATATTTTGTTAATCACTGCATTTAAAGAAGTCTTATGCACATGTGAGAGTTATGTATTAATAGTTCAAAATTTGAATCCTAATGGAGGGTCCAAATTGATCTCCTTACGAAGTTTAGAGTTTTAATTGATACAACCAACAAAGTTTAAAAGTACAATTTTATTTTTCCAAAATTTTAGCAAATCGAAAAGTTCCGACCTCGCGTTGGTTGCACATGAGAATTAATATATATCTGGGTCTTGTTGTGACTGCACTTGCATTCCTCAGTATGAGAACCTTAGGTGCGTTAATGTTGAATTTAGCATTGGTGGTGCATCACTGCTGGTTGAACTTTTTGTAGGAACGGAATTTCAGCTACTTCAAAGTTTCTGTTTAAATTTCTTTTTTCAGATTATAACTCAATTCAAAGTTAAGCATTTCAATAAAGTTTCATGGAATCCAGCATAAGTTTTAGTTCCCGTCCTTAGGAGTATGAATGTATGTGAAGTGAAAAGTCGAAGGTGATTTTTGGTCAGCATCCAAAATAAGTACGTCTGTATATTCACACTGTAATTTTTTTCAATGTTTTTAACCTTCGGAAAAAGGATTAATTAGCAATTCCCATGGTTAATTCACTTCAGTAATGAGTAAGAACTTAGCTCTCTTAGCCTAGTGGTTGTTGCTCTTTCCCTTAAAGACAGATACTTCACCGTACAAATCAAACAGCAATTTCGCATTTTTTATGCTTTGGTTTCCAAATCCCATGGTTCCTACTTCTAGAGTTTCACGTTCCCATTCCCTGATACCAAATGCTCTGTTTTTTCCTAGGAGTGTAAATGCAATATCCATTCTGTAAAACGAATTTGGTTATTTGGTTATGTTAGCTAAAGCTAGAACGGTTTGAAATTAGGTATTGCCTTTACTTTCTCATATTTTGTGTCAAATGTGAAATGATAGCCATCTCTCTCTTTTTAACAGGTACATTTTAGAGGTTATCCAAGACAGCTGTTAATTCCTTGTGAAGGTGAAGATAGTATAAAGTGGAGCTTTATTAACTCATTAAAAGAGGTTGGTAATACTTTCTTTAAATCTTGTCAAAATCGTTACAATCTCTTCAAGAAGAATACTACACACATAACTTTGTTCTAAGGCACCAAATGGATGCAGAAAATAATGTCTAATGGACTCCTAAACTTTTAAAACGTTAAATAGGGCCTTAAACTTTCCACCCTGTAAATAATCTTTGAGTTCTTTTTTCTTTCTAACTTCTAATTGACCCAGGAACCTTTTTTTTCTTTTTCTCAAGTACAATATAGGGATAGAGTGGGTCTCAAACCACATTGGGGAGGGGGAAAGCACCAATCAGTGTCAATGAGCTGCCTGTCGGATTATAGCACACCTCTCTATCCCTTTCATCATTAGCCAACTTAGGACATCTGCCACACTAATAAAGAGGAAGGGCAAAGGTGTTGAGTGTTGACTCTGTCTAATTTCCCGGTGGCAAAAATGTCCTCTTGGTCGGCCATTGTTCACATTAGAGAAATTAGTTGACTGAAGGCAATTCCGTTAACACATTTTCCATTTAAAGCCAAAACCCGTTTGGACACATTCTCATACAAAAACACCAAATCATGTGATTATAAGCCTTCTCTCAAAGTGTTATACCTTGATGATTATGCGTTCCTTAATCAGATATTCTTTTGGTGCCTGATTTGCGATCAGAACCCAATACAATATTTGTTTTCCACTCACAAGTATCCCTAGTGAAGTGGAGATGGAACTAGCAAGCACCTTTTTACTAATGACCAGTATAGAATTCTTAATTTTTGCGCCCCCAAACTTTTTTGGAATAAGACAAAAAAATTTATTCATGGTTTCATCTGCTACGCCTCTCTCATTGAAATTTGATTTAAATATGTTGTCTTAATAATGAGAGAAGAACAAAAAAGAGAAAAATGGAAGTCAACCGTCAATAAGGAAAAATAAAAAGATCACAATTTTCACTTGAAACGCTTTATCTTTTTTATTTGTAGTTTTCCTTAATCACTATTTTTTTTTTAAATTTTTTTTATTGATGCTTGTTATTTTTATTGTTTTTCCCCATAAGAGACACATGGCATATCATATTAAAAAAGGAAAGATGCACAAAAACAACAGGGGATAAAGCATCTCCTCCTGAAACCTCAAAAGGAGGACCTAAGAAGGAGCCCAATTCACCAAATTACAATTTCTTGTTTATATTTCTAATTTTTCCTAATTACTATTTTTAATGTTGTTATATTTGATGAGAGACACTTACTGTATCATATCAAAAAATGGGAAGATACAAAAGAAAGAAAAGATGAGTCATCTCTAAAATCTTGAAACAGCGAGTCTATGAAAGGACCCCAATTAAGTCAATAAAACTAGCAGGAGCGACTGACTGGCAAACAAACTCCCAAAGACCATAAAAACATCTGCTAGTCACTTCGAGGATTTTATTATTATTAATTTGCTATCATTGTTATTAATTTGATTGATGTCTTGTTGTGTAATTTTAAGTTGACACTCTTGGTAATTTATGATATTTGGTGAGAGTGATTTTCTACAAGTTGATCAAGGGATGTTCATTATAACCAGGCCGATTACATTGTCAATGGGAACACCAAGAATGTCATGAGCATGTCTCAACCTGATCTGGTGGTGTTATGGCGTTCTGTATTAAATGGTATGCTAGCAAGCCAGAAGTACCTTTGTTTTAGAAATTAAATCAGTAGTTTTTCAAGTGAAATGATGATTCCTTGATGGCATTTTACTTTACTTTCCATAATTTTGCACTTCAATCTAAGTTAATATTGCAATATTATTTTGTGATTTTGAACTTCAATCATTTTGGTGATATAGTTACTTTTGCAGCCTCCAATTAGAGCTCTGTTTTCTAAAAGGAACTGTGTAATATACAGCCGCCTAGGAGCAAGGGATAGAGAAAACCCTACTTGAAACTATAAAAGGGGAGCCTTTTAATTGTTGATAATCATAAAAATGTGTAGTTACATAATAGTTTTTTGTGGTTAGAGCACTACCAAGAAGTAGTGTGTTGTACGTTTCCTTCCTAATCAGCCAAACGACAGCACCATTTTGATGAACTTCTGTAATAATTCCTCTTTCTTTATTTACTCCAATAGTAATATTCTTGGCAAGCTCAATTGGTTAGAAGGGCTCTCCCTCTTTATATGTCTCTTCATCGATTTGTATAAAAAGGTTTCATATTTCTATTGTAAAGGCAGGAACATAAATTATGTGGAAATTTGGAGAAACACTCTCTATATTGAAGAAAAAATACAAAAAAGATAAGGTAGTATAAACCTATATAACTAATACGACTAAGATTCATGAAAAATATAAAGGAAATCCAATGGACTTTATAATGTGTTTTTTCTCTAATTTGTTCGGCTTGATCATTGGCTACTAGCAGGTGACTTGGAAGCCTACCTACGTATATCATCTAAACTTAAGCTTGGAGGAACTGACCATGAGCAATTGTTGAAATCTATATCAACTTCATCATTGCCTGGTCAAAGTACTAGTGAGATGGATATAGCAGGAAAAGTAATGACAGGTATGACAACCACTTGTAGGCATTTCAGTTTGAAGCACAATTTATCAAGCAAAAGTTCGATGATAAAGATTGTTTATACTGAATTTTTCCACCAAAAATGTTTTGGGTCGGCAGAGTGTAGAATCAACTCTTGGAATTGAGGTCATGAAAGAGGGTTCTACTCTTCTGGATCTTTATGAACTTTCTATTCATTACCTTTCTGCTTCATGACTGGGGTCTCCTCTTCTAGTTCCTTCCCCTCCCTCCCAATTTTTGTCTTCTTACTGTATATTTTATGAACTTTCTATTCATTACTTTACTTTCTGCTTCATGCCTTGTTGGGTTACATTGAGGTATATCAATATTTTTGTGTACTTGTAGTAATGCCATTCTGTATGTGGGTACTACCTAGGATTAGGGCTCCAAATCATGCGGTTGGATGTACCTTTTGGGGAATGGAGATAAATGTGGAGGGATTTTGAGAGGTTTTGTCTGCATTTACCTTGTAGTTTCTGTTTGGAGATATGAAAGCTGGAAATTAGAGAAAGTTTGGGAGTAAAGAAGAGGAATTTTATAGGTTTGGGACTATATTGCCTTTTGGTTTCTTTGTGCTTCTGCTAAAATATTCTTTGTCCTCTGTATCTAATTTGCATATTGGAGATTTATTCTGTAGACCCTTTACAACTTCTTTCCAATGGCAGTGATCCTTGGGTAGCCACATTTATACCAAATGTAGACAATAATTACAAAACGTAACCATTGTAATCATTCGGTAGACAATAATTACAAGATGTAACCATTATTCTTAATCATTTGTCTCTTCATCTATCCTTTTAAAAGAATTCACCATCAAGTGAAGTTTTTGATGGCATATATTTTCTCTTGGAGAGGGAGAGTTGTTCCAAATTGTTGTTTTGACTTCAAATGTGAGAGGTTTTGGTTCTTGCGCTAAAAGAACCATTGTCAACTAAACCAGACTTTGTGATTCCCATAGAAACGAAATCACGGATGCTGACTAGAAACTTTGTCTAGTCTAGGGCATCTTTAGATGTGGATGTCTCCCCTGATTGTATTCTCGTTCTTTCGAAGGATGTCTTTGTTATGATTATTGAGGTGCTTTAGGTAGGGTTCCTCTTTCCATCCTTGTTTCTATTTCCGATGGATTCTTTTGGCGGTTTATTGGGGTTTATGGGCCATCTTGTGGAAGGAGAAACCTCTTTAAATCAAACTAGTAGTGTTTTATCATTCTACTTTCTGGGTAGTCTCTAGAAGCAAAAGAATGTCTCTATTAATGCTTCTGTATGCCAAGGAAAGCAAGTATTGTGTTGTAAGATATTGGATTTTCATCGAACTTTACATGAGGGTACCGTGTGTGTGTGTGTTTTTTCTTAAGTTTGCACTTACATCTGTTACTCTCTTCCTTCAAGGCTAATATTCATTAACCCCGCTTTATGTTATCGTTTCACTTGTTAGGACAAGTTTCTTATTATTTAAGCATGTCCAGGTCGAATTCCAGTTCGATTGTATGTGAGGAATGTAGGTGAAGATTTTGATAATTTAGAAGATGCACCACCAGTTAATAGTTGGGATGATGTCTCATACATTAACCGTCCAGTAGAGATTCATGAAGAATGTAAGGCAACGCTATCTCTTTGTTTTTAGTTTTCTTATTCTTTTGGAAAAGCCTATTTTATGAGTACTGTGTTATTGAGTAGCCAGATTTATGTTGTCCAATCGATCAAAGAATGATAACAGAAAGATAGAAGCTAATTTATGAACAGGGAGGATTGAGTATAGACTGATTGATTTTTCACGATGAATCAATAACTCTTGTCTTGCGCTTTTTTAAAGTTGTCAACTTGAATATAGCTCAATTGATTTAAGGTGTATATCTTCCACAAAAAAGGTCCACAAAATAAATCCCCACCCTCGCATGTTGTTGAACTGAAGCGTCAACTTATATTGTATCGTTATGTAGCAATTTCATTTAGTAGTCAAAGTCTTCGGCATATGCAGAGATTCTCGTCCTCATCTCTATACATTGCAGGTAAGTGCTTCACCTTACATGATGCTATTAGGAGTTTGTTATCCGAGCTTTTCCTCGAGAAGGCAACTACCAAGGAGGAATCAACAACTATTATAGGGGAAGAAGAACAAAGTGATTGTACAGAACAGGTGGATTGTAAAAAAACTGAAGAGAGGGGATCAAATTTTTGTGATGAACATTTTCAATCTTATCATCCAAGCATCAAGCTTGTTAGGATCCAAGGGATTGAACCAAAATGCGAAATTCCTTTCTCCTGGGTGGTGAACAACTTAATGAACCCTGAATACTTTCTTCATATATGTGTTTTTGTAACAGTTCAACAAGTCAGATGCTAAGCTATAG

mRNA sequence

AGAAGAAGAAGAAGAAGAAGAAGCAGAAGGGAGGGAGAGAGAGAGAGACAGAGAGAGGGGGCATGGAAGCACTGAGGTACATCTGGGAAGGTGCAATTCCATTACAGATTCATCTCCATGAGTCTGAAGTCACCACCATCCCTCCTCCGCCGCCTGCAATGGTCTTGGCTCCTCGGATTGGCTACTTGCCTCTGTTGGCTTCTCAGATTAAACCTTACTTCAGTAGTACGCTTCCTCCTGGAGTGGACACCATTTGGTTTGAGTACAAGGGTTTGCCCCTTAAATGGCATATACCGACTGGTGTACTGTTTGACCTTCTATGTGCAGAACCAGAAAGACCGTGGAATCTAACGGTACATTTTAGAGGTTATCCAAGACAGCTGTTAATTCCTTGTGAAGGTGAAGATAGTATAAAGTGGAGCTTTATTAACTCATTAAAAGAGGCCGATTACATTGTCAATGGGAACACCAAGAATGTCATGAGCATGTCTCAACCTGATCTGGTGGTGTTATGGCGTTCTGTATTAAATGGTGACTTGGAAGCCTACCTACGTATATCATCTAAACTTAAGCTTGGAGGAACTGACCATGAGCAATTGTTGAAATCTATATCAACTTCATCATTGCCTGGTCAAAGTACTAGTGAGATGGATATAGCAGGAAAAGTAATGACAGGTCGAATTCCAGTTCGATTGTATGTGAGGAATGTAGGTGAAGATTTTGATAATTTAGAAGATGCACCACCAGTTAATAGTTGGGATGATGTCTCATACATTAACCGTCCAGTAGAGATTCATGAAGAATGTAAGTGCTTCACCTTACATGATGCTATTAGGAGTTTGTTATCCGAGCTTTTCCTCGAGAAGGCAACTACCAAGGAGGAATCAACAACTATTATAGGGGAAGAAGAACAAAGTGATTGTACAGAACAGTTCAACAAGTCAGATGCTAAGCTATAG

Coding sequence (CDS)

ATGGAAGCACTGAGGTACATCTGGGAAGGTGCAATTCCATTACAGATTCATCTCCATGAGTCTGAAGTCACCACCATCCCTCCTCCGCCGCCTGCAATGGTCTTGGCTCCTCGGATTGGCTACTTGCCTCTGTTGGCTTCTCAGATTAAACCTTACTTCAGTAGTACGCTTCCTCCTGGAGTGGACACCATTTGGTTTGAGTACAAGGGTTTGCCCCTTAAATGGCATATACCGACTGGTGTACTGTTTGACCTTCTATGTGCAGAACCAGAAAGACCGTGGAATCTAACGGTACATTTTAGAGGTTATCCAAGACAGCTGTTAATTCCTTGTGAAGGTGAAGATAGTATAAAGTGGAGCTTTATTAACTCATTAAAAGAGGCCGATTACATTGTCAATGGGAACACCAAGAATGTCATGAGCATGTCTCAACCTGATCTGGTGGTGTTATGGCGTTCTGTATTAAATGGTGACTTGGAAGCCTACCTACGTATATCATCTAAACTTAAGCTTGGAGGAACTGACCATGAGCAATTGTTGAAATCTATATCAACTTCATCATTGCCTGGTCAAAGTACTAGTGAGATGGATATAGCAGGAAAAGTAATGACAGGTCGAATTCCAGTTCGATTGTATGTGAGGAATGTAGGTGAAGATTTTGATAATTTAGAAGATGCACCACCAGTTAATAGTTGGGATGATGTCTCATACATTAACCGTCCAGTAGAGATTCATGAAGAATGTAAGTGCTTCACCTTACATGATGCTATTAGGAGTTTGTTATCCGAGCTTTTCCTCGAGAAGGCAACTACCAAGGAGGAATCAACAACTATTATAGGGGAAGAAGAACAAAGTGATTGTACAGAACAGTTCAACAAGTCAGATGCTAAGCTATAG

Protein sequence

MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPGVDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLLKSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINRPVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQFNKSDAKL
Homology
[Close]
BLAST of Carg24250 vs. NCBI nr
Match: KAG7017973.1 (Autophagy protein 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 614.0 bits (1582), Expect = 6.8e-172
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0 

Query: 1   MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG 60
           MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG
Sbjct: 1   MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG 60

Query: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120
           VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS
Sbjct: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120

Query: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL 180
           FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL
Sbjct: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL 180

Query: 181 KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINR 240
           KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINR
Sbjct: 181 KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINR 240

Query: 241 PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQFNKSDAKL 299
           PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQFNKSDAKL
Sbjct: 241 PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQFNKSDAKL 298

[Close]
BLAST of Carg24250 vs. NCBI nr
Match: XP_022935041.1 (autophagy protein 5 isoform X2 [Cucurbita moschata])

HSP 1 Score: 597.4 bits (1539), Expect = 6.6e-167
Identity = 289/290 (99.66%), Postives = 290/290 (100.00%), Query Frame = 0 

Query: 1   MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG 60
           MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG
Sbjct: 1   MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG 60

Query: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120
           VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS
Sbjct: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120

Query: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL 180
           FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL
Sbjct: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL 180

Query: 181 KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINR 240
           KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVN+WDDVSYINR
Sbjct: 181 KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNNWDDVSYINR 240

Query: 241 PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ 291
           PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ
Sbjct: 241 PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ 290

[Close]
BLAST of Carg24250 vs. NCBI nr
Match: XP_022935040.1 (autophagy protein 5 isoform X1 [Cucurbita moschata])

HSP 1 Score: 592.8 bits (1527), Expect = 1.6e-165
Identity = 289/291 (99.31%), Postives = 290/291 (99.66%), Query Frame = 0 

Query: 1   MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG 60
           MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG
Sbjct: 1   MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG 60

Query: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120
           VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS
Sbjct: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120

Query: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLN-GDLEAYLRISSKLKLGGTDHEQL 180
           FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLN GDLEAYLRISSKLKLGGTDHEQL
Sbjct: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNAGDLEAYLRISSKLKLGGTDHEQL 180

Query: 181 LKSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYIN 240
           LKSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVN+WDDVSYIN
Sbjct: 181 LKSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNNWDDVSYIN 240

Query: 241 RPVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ 291
           RPVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ
Sbjct: 241 RPVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ 291

[Close]
BLAST of Carg24250 vs. NCBI nr
Match: XP_023528056.1 (autophagy protein 5 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 586.6 bits (1511), Expect = 1.2e-163
Identity = 282/290 (97.24%), Postives = 287/290 (98.97%), Query Frame = 0 

Query: 1   MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG 60
           MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG
Sbjct: 1   MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG 60

Query: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120
           VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS
Sbjct: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120

Query: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL 180
           FINSLKEADYIVNGNTKNVMSMSQPDLV LWRSVLNGDLEAYLRISSKLKLGGTDHEQ+L
Sbjct: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVELWRSVLNGDLEAYLRISSKLKLGGTDHEQVL 180

Query: 181 KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINR 240
            SISTSSLPGQSTSEMDIAGKV+TGRIPVRLYVRNVGEDFDNLEDAPPVN+WDDVSYINR
Sbjct: 181 NSISTSSLPGQSTSEMDIAGKVLTGRIPVRLYVRNVGEDFDNLEDAPPVNNWDDVSYINR 240

Query: 241 PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ 291
           PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEEST IIG+EEQSDCTE+
Sbjct: 241 PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTNIIGQEEQSDCTEE 290

[Close]
BLAST of Carg24250 vs. NCBI nr
Match: XP_022982728.1 (autophagy protein 5 isoform X2 [Cucurbita maxima])

HSP 1 Score: 583.9 bits (1504), Expect = 7.6e-163
Identity = 282/290 (97.24%), Postives = 286/290 (98.62%), Query Frame = 0 

Query: 1   MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG 60
           MEALRYIWEGAIPLQIHLHESEVTTIP PPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG
Sbjct: 1   MEALRYIWEGAIPLQIHLHESEVTTIPSPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG 60

Query: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120
           VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS
Sbjct: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120

Query: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL 180
           FINSLKEADYIVNGNTKNVMSMSQPDLV LWRSVLNGDLEAYLRISSKLKLGGTDHEQ+L
Sbjct: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVELWRSVLNGDLEAYLRISSKLKLGGTDHEQVL 180

Query: 181 KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINR 240
            SI+TSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVN+WDDVSYINR
Sbjct: 181 NSITTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNNWDDVSYINR 240

Query: 241 PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ 291
           PVEIHEECKC TLHDAIRSLLSELFLEKATTKEESTTIIGEEE+SDCTEQ
Sbjct: 241 PVEIHEECKCLTLHDAIRSLLSELFLEKATTKEESTTIIGEEERSDCTEQ 290

[Close]
BLAST of Carg24250 vs. ExPASy Swiss-Prot
Match: Q9FFI2 (Autophagy protein 5 OS=Arabidopsis thaliana OX=3702 GN=ATG5 PE=2 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.9e-108
Identity = 184/289 (63.67%), Postives = 226/289 (78.20%), Query Frame = 0 

Query: 2   EALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPGV 61
           EA++Y+WEGAIPLQIHLH+S+V + P PPPA+VLAPRIGYLPLL   IKPYF  +LPPG 
Sbjct: 4   EAVKYVWEGAIPLQIHLHKSDVASHPAPPPALVLAPRIGYLPLLIPLIKPYFKDSLPPGE 63

Query: 62  DTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSF 121
           D+IWF+YKG PLKW+IPTGVLFDLLCAEPERPWNLT+HFRGYP  +LIPCEGEDS+KW+F
Sbjct: 64  DSIWFDYKGFPLKWYIPTGVLFDLLCAEPERPWNLTIHFRGYPCNILIPCEGEDSVKWNF 123

Query: 122 INSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLLK 181
           +NSLKEA YI+NGN KNVM+MSQ D   LW SV+NGDL+AY R+S KLK+G  + E   K
Sbjct: 124 VNSLKEAQYIINGNCKNVMNMSQSDQEDLWTSVMNGDLDAYTRLSPKLKMGTVEDEFSRK 183

Query: 182 SISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINRP 241
           +  +S    Q   E ++AG+V T RIPVRLYVR++ +DF+NLED P +++WDD+SY+NRP
Sbjct: 184 TSLSSPQSQQVVPETEVAGQVKTARIPVRLYVRSLNKDFENLEDVPEIDTWDDISYLNRP 243

Query: 242 VE-IHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTE 290
           VE + EE KCFTL DAI+SLL E   ++A T  E  +I   EE     E
Sbjct: 244 VEFLKEEGKCFTLRDAIKSLLPEFMGDRAQTSGEERSIDDTEEADGSRE 292

[Close]
BLAST of Carg24250 vs. ExPASy Swiss-Prot
Match: A2X052 (Autophagy protein 5 OS=Oryza sativa subsp. indica OX=39946 GN=ATG5 PE=3 SV=2)

HSP 1 Score: 347.8 bits (891), Expect = 1.2e-94
Identity = 162/272 (59.56%), Postives = 209/272 (76.84%), Query Frame = 0 

Query: 2   EALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPGV 61
           EA R +W GA+PLQ+HLH+++VTT+PPPPP + L PRIGYLPLL   IK +FSSTLPPG+
Sbjct: 14  EAARRVWGGAVPLQVHLHDADVTTLPPPPPFLTLGPRIGYLPLLVPIIKAHFSSTLPPGI 73

Query: 62  DTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSF 121
           DT+WFEYKGLPLKW+IP GVL+DLLCA+PERPWNLTVHFRGYP ++L PC+GEDS+KWS+
Sbjct: 74  DTVWFEYKGLPLKWYIPIGVLYDLLCADPERPWNLTVHFRGYPSEILTPCDGEDSVKWSY 133

Query: 122 INSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLLK 181
           +NSLKEA +I+ GN+KNVM+MSQ D   LW+SV+ G+L+ Y+ IS++LKLG  + + L++
Sbjct: 134 MNSLKEAAFIITGNSKNVMNMSQADQGALWQSVMKGNLDGYMNISTRLKLGPFEEDCLVR 193

Query: 182 SISTSSLPGQSTS-EMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINR 241
              TSS+ GQ  S E +  G     R+PVRLYVR+V ED  +LEDA PV  W+ +SYINR
Sbjct: 194 ---TSSVEGQQGSDEPESPGSGKPCRVPVRLYVRSVQEDLYDLEDALPVGDWESISYINR 253

Query: 242 PVEIHEE--CKCFTLHDAIRSLLSELFLEKAT 271
           P E+  E      TL  A+++LL E F  KA+
Sbjct: 254 PFEVRREEGRSYITLEHALKTLLPEFFSSKAS 282

[Close]
BLAST of Carg24250 vs. ExPASy Swiss-Prot
Match: Q6ZGL4 (Autophagy protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ATG5 PE=2 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 1.7e-93
Identity = 161/272 (59.19%), Postives = 208/272 (76.47%), Query Frame = 0 

Query: 2   EALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPGV 61
           EA R +W GA+PLQ+HLH+++VTT+PPPPP + L PRIGYLPLL   IK +FSSTLPPG+
Sbjct: 14  EAARRVWGGAVPLQVHLHDADVTTLPPPPPFLTLGPRIGYLPLLVPIIKAHFSSTLPPGI 73

Query: 62  DTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSF 121
           DT+WFEYKGLPLKW+IP GVL+DLLCA+PERPWNLTVHFRGYP ++L  C+GEDS+KWS+
Sbjct: 74  DTVWFEYKGLPLKWYIPIGVLYDLLCADPERPWNLTVHFRGYPSEILTLCDGEDSVKWSY 133

Query: 122 INSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLLK 181
           +NSLKEA +I+ GN+KNVM+MSQ D   LW+SV+ G+L+ Y+ IS++LKLG  + + L++
Sbjct: 134 MNSLKEAAFIITGNSKNVMNMSQADQGALWQSVMKGNLDGYMNISTRLKLGPFEEDCLVR 193

Query: 182 SISTSSLPGQSTS-EMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINR 241
              TSS+ GQ  S E +  G     R+PVRLYVR+V ED  +LEDA PV  W+ +SYINR
Sbjct: 194 ---TSSVEGQQGSDEPESPGSGKPCRVPVRLYVRSVQEDLYDLEDALPVGDWESISYINR 253

Query: 242 PVEIHEE--CKCFTLHDAIRSLLSELFLEKAT 271
           P E+  E      TL  A+++LL E F  KA+
Sbjct: 254 PFEVRREEGRSYITLEHALKTLLPEFFSSKAS 282

[Close]
BLAST of Carg24250 vs. ExPASy Swiss-Prot
Match: A1DMA1 (Autophagy protein 5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=atg5 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.6e-30
Identity = 71/189 (37.57%), Postives = 108/189 (57.14%), Query Frame = 0 

Query: 5   RYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTL-PPGVDT 64
           R +W+G +PLQI L  SE  T     P ++  PRI YLP L  +++ +FSS+L  P    
Sbjct: 18  RAVWDGKLPLQITLASSESRTYDQTDPYLIACPRISYLPSLLPRLRAFFSSSLIEPNSQP 77

Query: 65  I--WFEYKGLPLKWHIPTGVLFDLLC-AEPER-------------------PWNLTVHFR 124
              WF ++G+PLKWH+P G+L+DL   A+P                     PW LTVHF 
Sbjct: 78  HEGWFSFEGVPLKWHLPVGLLYDLYAGADPASKGTRIDETDHPSSSLSDTLPWRLTVHFS 137

Query: 125 GYPRQLLIPCEGEDSIKW-SFINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLE 170
            +P + L+  + +  +   +FINS+KEAD++ NG  K +M++S+ D   LW++V + DL 
Sbjct: 138 DWPDEELVRLDADGMVMHDAFINSVKEADFLRNGTAKGIMTLSKEDSAGLWQAVQDVDLP 197

[Close]
BLAST of Carg24250 vs. ExPASy Swiss-Prot
Match: Q4WNA5 (Autophagy protein 5 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=atg5 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.8e-29
Identity = 70/189 (37.04%), Postives = 107/189 (56.61%), Query Frame = 0 

Query: 5   RYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFS-STLPPGVDT 64
           R +W+G +PLQI L  SE  T     P ++  PRI YLP L  +++ +FS S + P    
Sbjct: 18  RAVWDGKLPLQITLASSESRTYDQTDPYLIACPRISYLPSLLPRLRAFFSPSLIEPNSQP 77

Query: 65  I--WFEYKGLPLKWHIPTGVLFDLLC-AEPER-------------------PWNLTVHFR 124
              WF ++G+PLKWH+P G+L+DL   A+P                     PW LTVHF 
Sbjct: 78  HEGWFSFEGVPLKWHLPVGLLYDLYAGADPASKGTRVDETDHPTSSLNDTLPWRLTVHFS 137

Query: 125 GYPRQLLIPCEGEDSIKW-SFINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLE 170
            +P + L+  + +  +   +FINS+KEAD++ NG  K +M++S+ D   LW++V + DL 
Sbjct: 138 DWPDEELVRLDADGMVMHDAFINSVKEADFLRNGTAKGIMTLSKEDSAGLWQAVQDVDLL 197

[Close]
BLAST of Carg24250 vs. ExPASy TrEMBL
Match: A0A6J1F3F6 (Autophagy protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111442026 PE=3 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 3.2e-167
Identity = 289/290 (99.66%), Postives = 290/290 (100.00%), Query Frame = 0 

Query: 1   MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG 60
           MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG
Sbjct: 1   MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG 60

Query: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120
           VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS
Sbjct: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120

Query: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL 180
           FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL
Sbjct: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL 180

Query: 181 KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINR 240
           KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVN+WDDVSYINR
Sbjct: 181 KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNNWDDVSYINR 240

Query: 241 PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ 291
           PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ
Sbjct: 241 PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ 290

[Close]
BLAST of Carg24250 vs. ExPASy TrEMBL
Match: A0A6J1F9G3 (Autophagy protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111442026 PE=3 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 7.9e-166
Identity = 289/291 (99.31%), Postives = 290/291 (99.66%), Query Frame = 0 

Query: 1   MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG 60
           MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG
Sbjct: 1   MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG 60

Query: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120
           VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS
Sbjct: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120

Query: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLN-GDLEAYLRISSKLKLGGTDHEQL 180
           FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLN GDLEAYLRISSKLKLGGTDHEQL
Sbjct: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNAGDLEAYLRISSKLKLGGTDHEQL 180

Query: 181 LKSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYIN 240
           LKSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVN+WDDVSYIN
Sbjct: 181 LKSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNNWDDVSYIN 240

Query: 241 RPVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ 291
           RPVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ
Sbjct: 241 RPVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ 291

[Close]
BLAST of Carg24250 vs. ExPASy TrEMBL
Match: A0A6J1J5M0 (Autophagy protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111481509 PE=3 SV=1)

HSP 1 Score: 583.9 bits (1504), Expect = 3.7e-163
Identity = 282/290 (97.24%), Postives = 286/290 (98.62%), Query Frame = 0 

Query: 1   MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG 60
           MEALRYIWEGAIPLQIHLHESEVTTIP PPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG
Sbjct: 1   MEALRYIWEGAIPLQIHLHESEVTTIPSPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG 60

Query: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120
           VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS
Sbjct: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120

Query: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL 180
           FINSLKEADYIVNGNTKNVMSMSQPDLV LWRSVLNGDLEAYLRISSKLKLGGTDHEQ+L
Sbjct: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVELWRSVLNGDLEAYLRISSKLKLGGTDHEQVL 180

Query: 181 KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINR 240
            SI+TSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVN+WDDVSYINR
Sbjct: 181 NSITTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNNWDDVSYINR 240

Query: 241 PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ 291
           PVEIHEECKC TLHDAIRSLLSELFLEKATTKEESTTIIGEEE+SDCTEQ
Sbjct: 241 PVEIHEECKCLTLHDAIRSLLSELFLEKATTKEESTTIIGEEERSDCTEQ 290

[Close]
BLAST of Carg24250 vs. ExPASy TrEMBL
Match: A0A6J1IXC8 (Autophagy protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111481509 PE=3 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 9.0e-162
Identity = 282/291 (96.91%), Postives = 286/291 (98.28%), Query Frame = 0 

Query: 1   MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG 60
           MEALRYIWEGAIPLQIHLHESEVTTIP PPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG
Sbjct: 1   MEALRYIWEGAIPLQIHLHESEVTTIPSPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG 60

Query: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120
           VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS
Sbjct: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120

Query: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLN-GDLEAYLRISSKLKLGGTDHEQL 180
           FINSLKEADYIVNGNTKNVMSMSQPDLV LWRSVLN GDLEAYLRISSKLKLGGTDHEQ+
Sbjct: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVELWRSVLNAGDLEAYLRISSKLKLGGTDHEQV 180

Query: 181 LKSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYIN 240
           L SI+TSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVN+WDDVSYIN
Sbjct: 181 LNSITTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNNWDDVSYIN 240

Query: 241 RPVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ 291
           RPVEIHEECKC TLHDAIRSLLSELFLEKATTKEESTTIIGEEE+SDCTEQ
Sbjct: 241 RPVEIHEECKCLTLHDAIRSLLSELFLEKATTKEESTTIIGEEERSDCTEQ 291

[Close]
BLAST of Carg24250 vs. ExPASy TrEMBL
Match: A0A5A7T773 (Autophagy protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001340 PE=3 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 5.3e-146
Identity = 253/292 (86.64%), Postives = 274/292 (93.84%), Query Frame = 0 

Query: 1   MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG 60
           M+AL+YIWEGAIPLQIHLHESEVTT+PPPPPAMVLAPRIGYLPLLASQIKPYF STLPPG
Sbjct: 1   MDALKYIWEGAIPLQIHLHESEVTTVPPPPPAMVLAPRIGYLPLLASQIKPYFGSTLPPG 60

Query: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120
           VDTIWFEY+GLPLKW+IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS
Sbjct: 61  VDTIWFEYQGLPLKWNIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120

Query: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL 180
           FINSLKEADYIVNGNTKNVMSMS+PDL+ LWRSV N DLEAYLRISSKLKLGGT  E +L
Sbjct: 121 FINSLKEADYIVNGNTKNVMSMSEPDLLELWRSVSNVDLEAYLRISSKLKLGGTGLEHVL 180

Query: 181 KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINR 240
           KSIS +SLP +S+ EMDIAG+++TGRIPVRLYVRN+G+DFDNLEDAPPVN+WDDVSYINR
Sbjct: 181 KSISAASLPAKSSGEMDIAGQLITGRIPVRLYVRNLGDDFDNLEDAPPVNNWDDVSYINR 240

Query: 241 PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQFN 293
           PVEI EE KCFTLHDA+RSLL ELF EKATTK+EST +IG EEQSD TEQ +
Sbjct: 241 PVEIQEEGKCFTLHDAVRSLLPELFTEKATTKDESTNVIG-EEQSDSTEQLD 291

[Close]
BLAST of Carg24250 vs. TAIR 10
Match: AT5G17290.1 (autophagy protein Apg5 family )

HSP 1 Score: 393.7 bits (1010), Expect = 1.4e-109
Identity = 184/289 (63.67%), Postives = 226/289 (78.20%), Query Frame = 0 

Query: 2   EALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPGV 61
           EA++Y+WEGAIPLQIHLH+S+V + P PPPA+VLAPRIGYLPLL   IKPYF  +LPPG 
Sbjct: 4   EAVKYVWEGAIPLQIHLHKSDVASHPAPPPALVLAPRIGYLPLLIPLIKPYFKDSLPPGE 63

Query: 62  DTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSF 121
           D+IWF+YKG PLKW+IPTGVLFDLLCAEPERPWNLT+HFRGYP  +LIPCEGEDS+KW+F
Sbjct: 64  DSIWFDYKGFPLKWYIPTGVLFDLLCAEPERPWNLTIHFRGYPCNILIPCEGEDSVKWNF 123

Query: 122 INSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLLK 181
           +NSLKEA YI+NGN KNVM+MSQ D   LW SV+NGDL+AY R+S KLK+G  + E   K
Sbjct: 124 VNSLKEAQYIINGNCKNVMNMSQSDQEDLWTSVMNGDLDAYTRLSPKLKMGTVEDEFSRK 183

Query: 182 SISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINRP 241
           +  +S    Q   E ++AG+V T RIPVRLYVR++ +DF+NLED P +++WDD+SY+NRP
Sbjct: 184 TSLSSPQSQQVVPETEVAGQVKTARIPVRLYVRSLNKDFENLEDVPEIDTWDDISYLNRP 243

Query: 242 VE-IHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTE 290
           VE + EE KCFTL DAI+SLL E   ++A T  E  +I   EE     E
Sbjct: 244 VEFLKEEGKCFTLRDAIKSLLPEFMGDRAQTSGEERSIDDTEEADGSRE 292

The following BLAST results are available for this feature:
BLAST of Carg24250 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7017973.16.8e-172100.00Autophagy protein 5 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022935041.16.6e-16799.66autophagy protein 5 isoform X2 [Cucurbita moschata][more]
XP_022935040.11.6e-16599.31autophagy protein 5 isoform X1 [Cucurbita moschata][more]
XP_023528056.11.2e-16397.24autophagy protein 5 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022982728.17.6e-16397.24autophagy protein 5 isoform X2 [Cucurbita maxima][more]
BLAST of Carg24250 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FFI21.9e-10863.67Autophagy protein 5 OS=Arabidopsis thaliana OX=3702 GN=ATG5 PE=2 SV=1[more]
A2X0521.2e-9459.56Autophagy protein 5 OS=Oryza sativa subsp. indica OX=39946 GN=ATG5 PE=3 SV=2[more]
Q6ZGL41.7e-9359.19Autophagy protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ATG5 PE=2 SV=1[more]
A1DMA13.6e-3037.57Autophagy protein 5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 5... [more]
Q4WNA51.8e-2937.04Autophagy protein 5 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS ... [more]
BLAST of Carg24250 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F3F63.2e-16799.66Autophagy protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111442026 PE=3 SV=1[more]
A0A6J1F9G37.9e-16699.31Autophagy protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111442026 PE=3 SV=1[more]
A0A6J1J5M03.7e-16397.24Autophagy protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111481509 PE=3 SV=1[more]
A0A6J1IXC89.0e-16296.91Autophagy protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111481509 PE=3 SV=1[more]
A0A5A7T7735.3e-14686.64Autophagy protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G... [more]
BLAST of Carg24250 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G17290.11.4e-10963.67autophagy protein Apg5 family [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007239Autophagy-related protein 5PFAMPF04106APG5coord: 75..274
e-value: 1.1E-46
score: 159.2
IPR007239Autophagy-related protein 5PANTHERPTHR13040AUTOPHAGY PROTEIN 5coord: 1..275
IPR042526Autophagy protein Atg5, helix rich domainGENE3D1.10.246.190Autophagy protein Apg5, helix rich domaincoord: 104..171
e-value: 4.9E-28
score: 98.6
IPR042527Autophagy protein Atg5, UblA domainGENE3D3.10.20.620coord: 1..103
e-value: 3.4E-33
score: 116.3
NoneNo IPR availableGENE3D3.10.20.90coord: 196..287
e-value: 3.2E-7
score: 32.2

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24250-RACarg24250-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006914 autophagy
cellular_component GO:0005737 cytoplasm