Carg24169 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24169
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	metalloendoproteinase 4-MMP-like
Location	Carg_Chr06: 6290738 .. 6291685 (-)
RNA-Seq Expression	Carg24169
Synteny	Carg24169

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCTGCCATTAATTCCTCGTTCTCGCTACCTTCTCTTGGCTCTGTTCTTCCTCTGCTTGCCACCCATTATTCCTTCCTCCGCCGTGACTTTCCGGCCAAATTCTACTGCACGGCAGTGGCGCGTGTCCGACACGTTGCATGGACCTCATGCAACGGCGCGTTACGTATATTTTCCCGGGAAGCCACGGTGGACGCGGCGAATGCCGATGGTGCTGACGTACGCATTTTTGAAGGAAAATTGGGTCAGCAATTTGAGTTTAAAAGACGTGAAATTCGTATTTCGTACGGCGTTTTCTAAATGGGCCCACGTGATTCCGGTGAGGTTCGAGGAGACGGAGGATTATGGGTTTGCTGATATTAAAATCGGGTTTTATAGAGGCGATCACGGCGACGGGCAGCCGTTCGACGGCGTGCTTGGGGTGTTGGCGCATTCTTTTTCTCCGGAGATTGGGAGGCTCCACCTGGATGCGGCGGAGACGTGGGCGGTTGATTTCGAGGAGGAGAAGTCGGCGGTGGCGGTTGATTTGGAATCTGTGGCGACGCATGAGATTGGGCATTTGTTGGGGTTGGGTCACAGCTCGGTGAGAGAATCAGTGATGTATCCCAGCTTGAAGCCGAGGGAAAAGAAGGCGAATTTGGAAGTGGATGACGTGGAAGGTGTGCAAGCTTTGTACGGATCCAATCCCAATTTCAGGTTTGAGTCATTGGAATTGGAGTCTGATACTTCTGCCACTCACCCACCTGTTTCCACGTGGACAATGACCTGGAATTTTCCCATTTCTTTCTTTTTCTTTTTCTTTTTCACTTCCAATTTTTTTGTTTTTCCATGACCATTAAAACAGCGTCGTTTTGCAGTGAGATTTTGATTTTTCCGTGAATCCAATAGACGGGCTCACTATACGTACTCCTATGCTCGACTACATGCTCTCATCTTGACCGAGTAG

mRNA sequence

ATGTTTCTGCCATTAATTCCTCGTTCTCGCTACCTTCTCTTGGCTCTGTTCTTCCTCTGCTTGCCACCCATTATTCCTTCCTCCGCCGTGACTTTCCGGCCAAATTCTACTGCACGGCAGTGGCGCGTGTCCGACACGTTGCATGGACCTCATGCAACGGCGCGTTACGTATATTTTCCCGGGAAGCCACGGTGGACGCGGCGAATGCCGATGGTGCTGACGTACGCATTTTTGAAGGAAAATTGGGTCAGCAATTTGAGTTTAAAAGACGTGAAATTCGTATTTCGTACGGCGTTTTCTAAATGGGCCCACGTGATTCCGGTGAGGTTCGAGGAGACGGAGGATTATGGGTTTGCTGATATTAAAATCGGGTTTTATAGAGGCGATCACGGCGACGGGCAGCCGTTCGACGGCGTGCTTGGGGTGTTGGCGCATTCTTTTTCTCCGGAGATTGGGAGGCTCCACCTGGATGCGGCGGAGACGTGGGCGGTTGATTTCGAGGAGGAGAAGTCGGCGGTGGCGGTTGATTTGGAATCTGTGGCGACGCATGAGATTGGGCATTTGTTGGGGTTGGGTCACAGCTCGGTGAGAGAATCAGTGATGTATCCCAGCTTGAAGCCGAGGGAAAAGAAGGCGAATTTGGAAGTGGATGACGTGGAAGGTGTGCAAGCTTTGTACGGATCCAATCCCAATTTCAGGTTTGAGTCATTGGAATTGGAGTCTGATACTTCTGCCACTCACCCACCTGTTTCCACACGGGCTCACTATACGTACTCCTATGCTCGACTACATGCTCTCATCTTGACCGAGTAG

Coding sequence (CDS)

ATGTTTCTGCCATTAATTCCTCGTTCTCGCTACCTTCTCTTGGCTCTGTTCTTCCTCTGCTTGCCACCCATTATTCCTTCCTCCGCCGTGACTTTCCGGCCAAATTCTACTGCACGGCAGTGGCGCGTGTCCGACACGTTGCATGGACCTCATGCAACGGCGCGTTACGTATATTTTCCCGGGAAGCCACGGTGGACGCGGCGAATGCCGATGGTGCTGACGTACGCATTTTTGAAGGAAAATTGGGTCAGCAATTTGAGTTTAAAAGACGTGAAATTCGTATTTCGTACGGCGTTTTCTAAATGGGCCCACGTGATTCCGGTGAGGTTCGAGGAGACGGAGGATTATGGGTTTGCTGATATTAAAATCGGGTTTTATAGAGGCGATCACGGCGACGGGCAGCCGTTCGACGGCGTGCTTGGGGTGTTGGCGCATTCTTTTTCTCCGGAGATTGGGAGGCTCCACCTGGATGCGGCGGAGACGTGGGCGGTTGATTTCGAGGAGGAGAAGTCGGCGGTGGCGGTTGATTTGGAATCTGTGGCGACGCATGAGATTGGGCATTTGTTGGGGTTGGGTCACAGCTCGGTGAGAGAATCAGTGATGTATCCCAGCTTGAAGCCGAGGGAAAAGAAGGCGAATTTGGAAGTGGATGACGTGGAAGGTGTGCAAGCTTTGTACGGATCCAATCCCAATTTCAGGTTTGAGTCATTGGAATTGGAGTCTGATACTTCTGCCACTCACCCACCTGTTTCCACACGGGCTCACTATACGTACTCCTATGCTCGACTACATGCTCTCATCTTGACCGAGTAG

Protein sequence

MFLPLIPRSRYLLLALFFLCLPPIIPSSAVTFRPNSTARQWRVSDTLHGPHATARYVYFPGKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRFESLELESDTSATHPPVSTRAHYTYSYARLHALILTE

Homology

[Close]

BLAST of Carg24169 vs. NCBI nr
Match: KAG7028506.1 (Metalloendoproteinase 4-MMP, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 550.1 bits (1416), Expect = 1.1e-152
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MFLPLIPRSRYLLLALFFLCLPPIIPSSAVTFRPNSTARQWRVSDTLHGPHATARYVYFP 60
           MFLPLIPRSRYLLLALFFLCLPPIIPSSAVTFRPNSTARQWRVSDTLHGPHATARYVYFP
Sbjct: 1   MFLPLIPRSRYLLLALFFLCLPPIIPSSAVTFRPNSTARQWRVSDTLHGPHATARYVYFP 60

Query: 61  GKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120
           GKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD
Sbjct: 61  GKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120

Query: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180
           IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV
Sbjct: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180

Query: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRFESLELE 240
           ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRFESLELE
Sbjct: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRFESLELE 240

Query: 241 SDTSATHPPVSTRAHYTYSYARLHALILTE 271
           SDTSATHPPVSTRAHYTYSYARLHALILTE
Sbjct: 241 SDTSATHPPVSTRAHYTYSYARLHALILTE 270

[Close]

BLAST of Carg24169 vs. NCBI nr
Match: XP_023539433.1 (metalloendoproteinase 4-MMP-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 502.3 bits (1292), Expect = 2.6e-138
Identity = 247/252 (98.02%), Postives = 248/252 (98.41%), Query Frame = 0


Query: 1   MFLPLIPRSRYLLLALFFLCLPPIIPSSAVTFRPNSTARQWRVSDTLHGPHATARYVYFP 60
           MFLPLIP SRYLLLALFFLCLPPIIPSSAVTFRPNSTAR+WRVSDTLHGPHATARYVYFP
Sbjct: 1   MFLPLIPPSRYLLLALFFLCLPPIIPSSAVTFRPNSTARRWRVSDTLHGPHATARYVYFP 60

Query: 61  GKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120
           GKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD
Sbjct: 61  GKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120

Query: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180
           IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE EKSAVAVDLESV
Sbjct: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEVEKSAVAVDLESV 180

Query: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRFESLELE 240
           ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRFES ELE
Sbjct: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRFESSELE 240

Query: 241 SDTSATHPPVST 253
           SDTSATH PVST
Sbjct: 241 SDTSATHAPVST 252

[Close]

BLAST of Carg24169 vs. NCBI nr
Match: KAG6597028.1 (Metalloendoproteinase 4-MMP, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 495.4 bits (1274), Expect = 3.2e-136
Identity = 248/270 (91.85%), Postives = 249/270 (92.22%), Query Frame = 0


Query: 1   MFLPLIPRSRYLLLALFFLCLPPIIPSSAVTFRPNSTARQWRVSDTLHGPHATARYVYFP 60
           MFLPLIPRSRYLLLALFFLCLP IIPSSAVTFRPNSTAR+WRVSDTLHGPHATARYVYFP
Sbjct: 1   MFLPLIPRSRYLLLALFFLCLPSIIPSSAVTFRPNSTARRWRVSDTLHGPHATARYVYFP 60

Query: 61  GKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120
           GKPRWTRRMPMVLTYAF KENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD
Sbjct: 61  GKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120

Query: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180
           IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV
Sbjct: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180

Query: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRFESLELE 240
           ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFR       
Sbjct: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFR------- 240

Query: 241 SDTSATHPPVSTRAHYTYSYARLHALILTE 271
                       RAHYTYSYARLHALILTE
Sbjct: 241 ------------RAHYTYSYARLHALILTE 251

[Close]

BLAST of Carg24169 vs. NCBI nr
Match: XP_022974263.1 (metalloendoproteinase 4-MMP-like [Cucurbita maxima])

HSP 1 Score: 485.7 bits (1249), Expect = 2.5e-133
Identity = 237/246 (96.34%), Postives = 241/246 (97.97%), Query Frame = 0


Query: 1   MFLPLIPRSRYLLLALFFLCLPPIIPSSAVTFRPNSTARQWRVSDTLHGPHATARYVYFP 60
           MFLP IP  RYLLLALFFLCLPPIIPSSAVTFR NSTAR+WRV+DTLHGPH TARY+YFP
Sbjct: 1   MFLPSIPPPRYLLLALFFLCLPPIIPSSAVTFRSNSTARRWRVADTLHGPHVTARYLYFP 60

Query: 61  GKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120
           GKPRWTRRMPMVLTYAFLKENW+SNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD
Sbjct: 61  GKPRWTRRMPMVLTYAFLKENWISNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120

Query: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180
           IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV
Sbjct: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180

Query: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRFESLELE 240
           ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRFESLELE
Sbjct: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRFESLELE 240

Query: 241 SDTSAT 247
           SDTSAT
Sbjct: 241 SDTSAT 246

[Close]

BLAST of Carg24169 vs. NCBI nr
Match: XP_022944853.1 (metalloendoproteinase 4-MMP-like [Cucurbita moschata])

HSP 1 Score: 469.9 bits (1208), Expect = 1.4e-128
Identity = 229/232 (98.71%), Postives = 230/232 (99.14%), Query Frame = 0


Query: 1   MFLPLIPRSRYLLLALFFLCLPPIIPSSAVTFRPNSTARQWRVSDTLHGPHATARYVYFP 60
           MFLPLIPRSRYLLLALFFLCLP IIPSSAVTFRPNSTAR+WRVSDTLHGPHATARYVYFP
Sbjct: 1   MFLPLIPRSRYLLLALFFLCLPSIIPSSAVTFRPNSTARRWRVSDTLHGPHATARYVYFP 60

Query: 61  GKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120
           GKPRWTRRMPMVLTYAF KENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD
Sbjct: 61  GKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120

Query: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180
           IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV
Sbjct: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180

Query: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNF 233
           ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNF
Sbjct: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNF 232

[Close]

BLAST of Carg24169 vs. ExPASy Swiss-Prot
Match: Q8GWW6 (Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana OX=3702 GN=4MMP PE=1 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.0e-76
Identity = 138/194 (71.13%), Postives = 160/194 (82.47%), Query Frame = 0


Query: 51  HATARYVYFPGKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRF 110
           H   +YVYFPG+PRWTR +P+ LTYAF +EN    L+  D++ VFR AF KWA VIPV F
Sbjct: 120 HTGKKYVYFPGRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKWASVIPVSF 179

Query: 111 EETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEK 170
            ETEDY  ADIKIGF+ GDHGDG+PFDGVLGVLAH+FSPE GRLHLD AETWAVDF+EEK
Sbjct: 180 IETEDYVIADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEK 239

Query: 171 SAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNP 230
           S+VAVDLESVA HEIGH+LGLGHSSV+++ MYP+LKPR KK NL +DDV GVQ+LYG+NP
Sbjct: 240 SSVAVDLESVAVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLYGTNP 299

Query: 231 NFRFESLELESDTS 245
           NF   SL L S+TS
Sbjct: 300 NFTLNSL-LASETS 312

[Close]

BLAST of Carg24169 vs. ExPASy Swiss-Prot
Match: O23507 (Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.4e-64
Identity = 128/204 (62.75%), Postives = 149/204 (73.04%), Query Frame = 0


Query: 51  HATARYVYFPGKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRF 110
           H TA Y YF GKP+W R     LTYA  K + +  L+ +DVK VFR AFS+W+ VIPV F
Sbjct: 145 HTTAHYTYFNGKPKWNRD---TLTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSF 204

Query: 111 EETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE-EE 170
           EE +D+  AD+KIGFY GDHGDG PFDGVLG LAH+F+PE GRLHLDAAETW VD + + 
Sbjct: 205 EEVDDFTTADLKIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKG 264

Query: 171 KSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSN 230
            S VAVDLESVATHEIGHLLGLGHSS   +VMYPSL+PR KK +L VDDV GV  LYG N
Sbjct: 265 SSEVAVDLESVATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLYGPN 324

Query: 231 PNFRFESLELESDTSATHPPVSTR 254
           P  R +SL  +S+ S  +  VS R
Sbjct: 325 PKLRLDSL-TQSEDSIKNGTVSHR 344

[Close]

BLAST of Carg24169 vs. ExPASy Swiss-Prot
Match: O04529 (Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.5e-51
Identity = 106/206 (51.46%), Postives = 133/206 (64.56%), Query Frame = 0


Query: 51  HATARYVYFPGKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRF 110
           HA  RY  FPG+PRW R     LTYAF  +N ++    ++VK VF  AF +W+ V  + F
Sbjct: 150 HAVKRYTLFPGEPRWPRNR-RDLTYAFDPKNPLT----EEVKSVFSRAFGRWSDVTALNF 209

Query: 111 EETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEE- 170
             +E +  +DI IGFY GDHGDG+PFDGVLG LAH+FSP  G+ HLDA E W V  + + 
Sbjct: 210 TLSESFSTSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDS 269

Query: 171 --KSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYG 230
                 AVDLESVA HEIGHLLGLGHSSV ES+MYP++   ++K +L  DDVEG+Q LYG
Sbjct: 270 FLSVTAAVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLYG 329

Query: 231 SNPNFRFESLELESDTSATHPPVSTR 254
           +NPNF             T PP +T+
Sbjct: 330 ANPNF----------NGTTSPPSTTK 340

[Close]

BLAST of Carg24169 vs. ExPASy Swiss-Prot
Match: Q5XF51 (Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.2e-48
Identity = 103/211 (48.82%), Postives = 128/211 (60.66%), Query Frame = 0


Query: 51  HATARYVYFPGKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRF 110
           HA   Y +FPG+PRW R     LTYAF   N ++    ++VK VF  AF++W  V P+ F
Sbjct: 154 HAVKHYSFFPGEPRWPRNR-RDLTYAFDPRNALT----EEVKSVFSRAFTRWEEVTPLTF 213

Query: 111 EETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEK 170
              E +  +DI IGFY G+HGDG+PFDG +  LAH+FSP  G  HLD  E W V  E   
Sbjct: 214 TRVERFSTSDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGD 273

Query: 171 SAV----AVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALY 230
             +    AVDLESVA HEIGHLLGLGHSSV  S+MYP+++   +K +L  DDVEGVQ LY
Sbjct: 274 GFISVSEAVDLESVAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYLY 333

Query: 231 GSNPNFRFESLELESDTSATHPPVSTRAHYT 258
           G+NPNF            +  PP ST+   T
Sbjct: 334 GANPNF----------NGSRSPPPSTQQRDT 349

[Close]

BLAST of Carg24169 vs. ExPASy Swiss-Prot
Match: Q9ZUJ5 (Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.1e-46
Identity = 95/184 (51.63%), Postives = 122/184 (66.30%), Query Frame = 0


Query: 53  TARYVYFPGKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEE 112
           T +Y +FPGKPRW +R    LTYAF  +N   NL+  +VK VF  AF++WA V P+ F  
Sbjct: 140 TEKYSFFPGKPRWPKR-KRDLTYAFAPQN---NLT-DEVKRVFSRAFTRWAEVTPLNFTR 199

Query: 113 TEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSA 172
           +E    ADI IGF+ G+HGDG+PFDG +G LAH+ SP  G LHLD  E W +   E    
Sbjct: 200 SESILRADIVIGFFSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRR 259

Query: 173 V-----AVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYG 232
           +      VDLESVA HEIGHLLGLGHSSV +++M+P++   ++K  L  DD+EG+Q LYG
Sbjct: 260 ILPVTTVVDLESVAVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHLYG 318

[Close]

BLAST of Carg24169 vs. ExPASy TrEMBL
Match: A0A6J1IFQ0 (metalloendoproteinase 4-MMP-like OS=Cucurbita maxima OX=3661 GN=LOC111472903 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 1.2e-133
Identity = 237/246 (96.34%), Postives = 241/246 (97.97%), Query Frame = 0


Query: 1   MFLPLIPRSRYLLLALFFLCLPPIIPSSAVTFRPNSTARQWRVSDTLHGPHATARYVYFP 60
           MFLP IP  RYLLLALFFLCLPPIIPSSAVTFR NSTAR+WRV+DTLHGPH TARY+YFP
Sbjct: 1   MFLPSIPPPRYLLLALFFLCLPPIIPSSAVTFRSNSTARRWRVADTLHGPHVTARYLYFP 60

Query: 61  GKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120
           GKPRWTRRMPMVLTYAFLKENW+SNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD
Sbjct: 61  GKPRWTRRMPMVLTYAFLKENWISNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120

Query: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180
           IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV
Sbjct: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180

Query: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRFESLELE 240
           ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRFESLELE
Sbjct: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRFESLELE 240

Query: 241 SDTSAT 247
           SDTSAT
Sbjct: 241 SDTSAT 246

[Close]

BLAST of Carg24169 vs. ExPASy TrEMBL
Match: A0A6J1FZ72 (metalloendoproteinase 4-MMP-like OS=Cucurbita moschata OX=3662 GN=LOC111449256 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 7.0e-129
Identity = 229/232 (98.71%), Postives = 230/232 (99.14%), Query Frame = 0


Query: 1   MFLPLIPRSRYLLLALFFLCLPPIIPSSAVTFRPNSTARQWRVSDTLHGPHATARYVYFP 60
           MFLPLIPRSRYLLLALFFLCLP IIPSSAVTFRPNSTAR+WRVSDTLHGPHATARYVYFP
Sbjct: 1   MFLPLIPRSRYLLLALFFLCLPSIIPSSAVTFRPNSTARRWRVSDTLHGPHATARYVYFP 60

Query: 61  GKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120
           GKPRWTRRMPMVLTYAF KENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD
Sbjct: 61  GKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120

Query: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180
           IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV
Sbjct: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180

Query: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNF 233
           ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNF
Sbjct: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNF 232

[Close]

BLAST of Carg24169 vs. ExPASy TrEMBL
Match: A0A5D3DB58 (Metalloendoproteinase 4-MMP OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00450 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.7e-111
Identity = 209/264 (79.17%), Postives = 225/264 (85.23%), Query Frame = 0


Query: 1   MFLPLIPRSRYLLLALFFLCLPPIIP----------SSAVTFRPNSTARQW--RVSDTLH 60
           MFLPL      LLL  FFLC P  +P          ++ + FR NS++ Q   R+++TLH
Sbjct: 1   MFLPL------LLLLFFFLCTPSCLPYPTTLPQNSTAAVIIFRSNSSSLQGRRRLTETLH 60

Query: 61  GPHATARYVYFPGKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPV 120
            PHAT RYV+FPGKPRW RRMPMVLTYAF KENW+SNLSLKDV+ VFR AFSKWAHVIPV
Sbjct: 61  NPHATERYVFFPGKPRWARRMPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPV 120

Query: 121 RFEETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEE 180
            FEET+DYG+ADIKIGFYRGDH DGQ FDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE+
Sbjct: 121 SFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEK 180

Query: 181 EKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGS 240
           EKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGS
Sbjct: 181 EKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGS 240

Query: 241 NPNFRFESLELESDTSATHPPVST 253
           NPNF+FESLELESDTS T PPVST
Sbjct: 241 NPNFKFESLELESDTSDTQPPVST 258

[Close]

BLAST of Carg24169 vs. ExPASy TrEMBL
Match: A0A1S3AUH8 (metalloendoproteinase 4-MMP OS=Cucumis melo OX=3656 GN=LOC103483123 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.7e-111
Identity = 209/264 (79.17%), Postives = 225/264 (85.23%), Query Frame = 0


Query: 1   MFLPLIPRSRYLLLALFFLCLPPIIP----------SSAVTFRPNSTARQW--RVSDTLH 60
           MFLPL      LLL  FFLC P  +P          ++ + FR NS++ Q   R+++TLH
Sbjct: 1   MFLPL------LLLLFFFLCTPSCLPYPTTLPQNSTAAVIIFRSNSSSLQGRRRLTETLH 60

Query: 61  GPHATARYVYFPGKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPV 120
            PHAT RYV+FPGKPRW RRMPMVLTYAF KENW+SNLSLKDV+ VFR AFSKWAHVIPV
Sbjct: 61  NPHATERYVFFPGKPRWARRMPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPV 120

Query: 121 RFEETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEE 180
            FEET+DYG+ADIKIGFYRGDH DGQ FDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE+
Sbjct: 121 SFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEK 180

Query: 181 EKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGS 240
           EKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGS
Sbjct: 181 EKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGS 240

Query: 241 NPNFRFESLELESDTSATHPPVST 253
           NPNF+FESLELESDTS T PPVST
Sbjct: 241 NPNFKFESLELESDTSDTQPPVST 258

[Close]

BLAST of Carg24169 vs. ExPASy TrEMBL
Match: A0A0A0L2Y8 (ZnMc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G117950 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 2.1e-109
Identity = 208/261 (79.69%), Postives = 222/261 (85.06%), Query Frame = 0


Query: 1   MFLPLIPRSRYLLLALFFLCLP---------PIIPSSAVTFRPNSTARQWRVSDTLHGPH 60
           MFLPL      LLL  FFLC P         P  P+SAV FR +S+        +LH PH
Sbjct: 1   MFLPL------LLLLFFFLCTPSCLPYPTTLPQNPTSAVIFRSDSS--------SLHNPH 60

Query: 61  ATARYVYFPGKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFE 120
           AT RYV+FPGKPRWTRRMPMVLTYAF K+NW+SNLSL+DV+ VFR AFSKWAHVIPV FE
Sbjct: 61  ATERYVFFPGKPRWTRRMPMVLTYAFFKDNWMSNLSLEDVRAVFRKAFSKWAHVIPVSFE 120

Query: 121 ETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKS 180
           ET+DYG+ADIKIGFYRGDH DGQ FDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE+EKS
Sbjct: 121 ETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKS 180

Query: 181 AVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPN 240
           AVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPN
Sbjct: 181 AVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPN 240

Query: 241 FRFESLELESDTSATHPPVST 253
           F+FESLELESDTSA+ PPVST
Sbjct: 241 FKFESLELESDTSASQPPVST 247

[Close]

BLAST of Carg24169 vs. TAIR 10
Match: AT2G45040.1 (Matrixin family protein )

HSP 1 Score: 288.1 bits (736), Expect = 7.3e-78
Identity = 138/194 (71.13%), Postives = 160/194 (82.47%), Query Frame = 0


Query: 51  HATARYVYFPGKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRF 110
           H   +YVYFPG+PRWTR +P+ LTYAF +EN    L+  D++ VFR AF KWA VIPV F
Sbjct: 120 HTGKKYVYFPGRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKWASVIPVSF 179

Query: 111 EETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEK 170
            ETEDY  ADIKIGF+ GDHGDG+PFDGVLGVLAH+FSPE GRLHLD AETWAVDF+EEK
Sbjct: 180 IETEDYVIADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEK 239

Query: 171 SAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNP 230
           S+VAVDLESVA HEIGH+LGLGHSSV+++ MYP+LKPR KK NL +DDV GVQ+LYG+NP
Sbjct: 240 SSVAVDLESVAVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLYGTNP 299

Query: 231 NFRFESLELESDTS 245
           NF   SL L S+TS
Sbjct: 300 NFTLNSL-LASETS 312

[Close]

BLAST of Carg24169 vs. TAIR 10
Match: AT4G16640.1 (Matrixin family protein )

HSP 1 Score: 246.5 bits (628), Expect = 2.4e-65
Identity = 128/204 (62.75%), Postives = 149/204 (73.04%), Query Frame = 0


Query: 51  HATARYVYFPGKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRF 110
           H TA Y YF GKP+W R     LTYA  K + +  L+ +DVK VFR AFS+W+ VIPV F
Sbjct: 145 HTTAHYTYFNGKPKWNRD---TLTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSF 204

Query: 111 EETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE-EE 170
           EE +D+  AD+KIGFY GDHGDG PFDGVLG LAH+F+PE GRLHLDAAETW VD + + 
Sbjct: 205 EEVDDFTTADLKIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKG 264

Query: 171 KSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSN 230
            S VAVDLESVATHEIGHLLGLGHSS   +VMYPSL+PR KK +L VDDV GV  LYG N
Sbjct: 265 SSEVAVDLESVATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLYGPN 324

Query: 231 PNFRFESLELESDTSATHPPVSTR 254
           P  R +SL  +S+ S  +  VS R
Sbjct: 325 PKLRLDSL-TQSEDSIKNGTVSHR 344

[Close]

BLAST of Carg24169 vs. TAIR 10
Match: AT1G70170.1 (matrix metalloproteinase )

HSP 1 Score: 203.8 bits (517), Expect = 1.8e-52
Identity = 106/206 (51.46%), Postives = 133/206 (64.56%), Query Frame = 0


Query: 51  HATARYVYFPGKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRF 110
           HA  RY  FPG+PRW R     LTYAF  +N ++    ++VK VF  AF +W+ V  + F
Sbjct: 150 HAVKRYTLFPGEPRWPRNR-RDLTYAFDPKNPLT----EEVKSVFSRAFGRWSDVTALNF 209

Query: 111 EETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEE- 170
             +E +  +DI IGFY GDHGDG+PFDGVLG LAH+FSP  G+ HLDA E W V  + + 
Sbjct: 210 TLSESFSTSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDS 269

Query: 171 --KSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYG 230
                 AVDLESVA HEIGHLLGLGHSSV ES+MYP++   ++K +L  DDVEG+Q LYG
Sbjct: 270 FLSVTAAVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLYG 329

Query: 231 SNPNFRFESLELESDTSATHPPVSTR 254
           +NPNF             T PP +T+
Sbjct: 330 ANPNF----------NGTTSPPSTTK 340

[Close]

BLAST of Carg24169 vs. TAIR 10
Match: AT1G24140.1 (Matrixin family protein )

HSP 1 Score: 194.9 bits (494), Expect = 8.4e-50
Identity = 103/211 (48.82%), Postives = 128/211 (60.66%), Query Frame = 0


Query: 51  HATARYVYFPGKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRF 110
           HA   Y +FPG+PRW R     LTYAF   N ++    ++VK VF  AF++W  V P+ F
Sbjct: 154 HAVKHYSFFPGEPRWPRNR-RDLTYAFDPRNALT----EEVKSVFSRAFTRWEEVTPLTF 213

Query: 111 EETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEK 170
              E +  +DI IGFY G+HGDG+PFDG +  LAH+FSP  G  HLD  E W V  E   
Sbjct: 214 TRVERFSTSDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGD 273

Query: 171 SAV----AVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALY 230
             +    AVDLESVA HEIGHLLGLGHSSV  S+MYP+++   +K +L  DDVEGVQ LY
Sbjct: 274 GFISVSEAVDLESVAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYLY 333

Query: 231 GSNPNFRFESLELESDTSATHPPVSTRAHYT 258
           G+NPNF            +  PP ST+   T
Sbjct: 334 GANPNF----------NGSRSPPPSTQQRDT 349

[Close]

BLAST of Carg24169 vs. TAIR 10
Match: AT1G59970.1 (Matrixin family protein )

HSP 1 Score: 188.3 bits (477), Expect = 7.8e-48
Identity = 95/184 (51.63%), Postives = 122/184 (66.30%), Query Frame = 0


Query: 53  TARYVYFPGKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEE 112
           T +Y +FPGKPRW +R    LTYAF  +N   NL+  +VK VF  AF++WA V P+ F  
Sbjct: 140 TEKYSFFPGKPRWPKR-KRDLTYAFAPQN---NLT-DEVKRVFSRAFTRWAEVTPLNFTR 199

Query: 113 TEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSA 172
           +E    ADI IGF+ G+HGDG+PFDG +G LAH+ SP  G LHLD  E W +   E    
Sbjct: 200 SESILRADIVIGFFSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRR 259

Query: 173 V-----AVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYG 232
           +      VDLESVA HEIGHLLGLGHSSV +++M+P++   ++K  L  DD+EG+Q LYG
Sbjct: 260 ILPVTTVVDLESVAVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHLYG 318

The following BLAST results are available for this feature:

BLAST of Carg24169 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7028506.1	1.1e-152	100.00	Metalloendoproteinase 4-MMP, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_023539433.1	2.6e-138	98.02	metalloendoproteinase 4-MMP-like [Cucurbita pepo subsp. pepo]	[more]
KAG6597028.1	3.2e-136	91.85	Metalloendoproteinase 4-MMP, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022974263.1	2.5e-133	96.34	metalloendoproteinase 4-MMP-like [Cucurbita maxima]	[more]
XP_022944853.1	1.4e-128	98.71	metalloendoproteinase 4-MMP-like [Cucurbita moschata]	[more]

BLAST of Carg24169 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWW6	1.0e-76	71.13	Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana OX=3702 GN=4MMP PE=1 SV=1	[more]
O23507	3.4e-64	62.75	Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1	[more]
O04529	2.5e-51	51.46	Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1	[more]
Q5XF51	1.2e-48	48.82	Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1	[more]
Q9ZUJ5	1.1e-46	51.63	Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1	[more]

BLAST of Carg24169 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IFQ0	1.2e-133	96.34	metalloendoproteinase 4-MMP-like OS=Cucurbita maxima OX=3661 GN=LOC111472903 PE=...	[more]
A0A6J1FZ72	7.0e-129	98.71	metalloendoproteinase 4-MMP-like OS=Cucurbita moschata OX=3662 GN=LOC111449256 P...	[more]
A0A5D3DB58	1.7e-111	79.17	Metalloendoproteinase 4-MMP OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3AUH8	1.7e-111	79.17	metalloendoproteinase 4-MMP OS=Cucumis melo OX=3656 GN=LOC103483123 PE=4 SV=1	[more]
A0A0A0L2Y8	2.1e-109	79.69	ZnMc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G117950 PE=4 S...	[more]

BLAST of Carg24169 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45040.1	7.3e-78	71.13	Matrixin family protein	[more]
AT4G16640.1	2.4e-65	62.75	Matrixin family protein	[more]
AT1G70170.1	1.8e-52	51.46	matrix metalloproteinase	[more]
AT1G24140.1	8.4e-50	48.82	Matrixin family protein	[more]
AT1G59970.1	7.8e-48	51.63	Matrixin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021190	Peptidase M10A	PRINTS	PR00138	MATRIXIN	coord: 180..205 score: 55.77 coord: 95..110 score: 39.41 coord: 119..147 score: 59.04 coord: 214..227 score: 58.8
IPR006026	Peptidase, metallopeptidase	SMART	SM00235	col_5	coord: 61..228 e-value: 1.0E-43 score: 161.2
IPR001818	Peptidase M10, metallopeptidase	PFAM	PF00413	Peptidase_M10	coord: 68..227 e-value: 6.7E-48 score: 162.5
IPR024079	Metallopeptidase, catalytic domain superfamily	GENE3D	3.40.390.10	Collagenase (Catalytic Domain)	coord: 31..232 e-value: 2.5E-55 score: 189.5
None	No IPR available	PANTHER	PTHR10201	MATRIX METALLOPROTEINASE	coord: 43..257
None	No IPR available	PANTHER	PTHR10201:SF245	METALLOENDOPROTEINASE 4-MMP	coord: 43..257
None	No IPR available	SUPERFAMILY	55486	Metalloproteases ("zincins"), catalytic domain	coord: 56..230
IPR033739	Peptidase M10A, catalytic domain	CDD	cd04278	ZnMc_MMP	coord: 64..227 e-value: 3.13148E-65 score: 198.967

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24169-RA	Carg24169-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030574	collagen catabolic process
biological_process	GO:0030198	extracellular matrix organization
biological_process	GO:0006508	proteolysis
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0031012	extracellular matrix
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0008237	metallopeptidase activity