Carg24042 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24042
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	THO complex subunit 7A-like
Location	Carg_Chr02: 2159322 .. 2164639 (-)
RNA-Seq Expression	Carg24042
Synteny	Carg24042

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATTTCGCTTTCCATGATCTTCCGTTGTCAGTGTTTCTGTAGAAAGAATCAGAATTTCGCTTTCCATGATCTTCCGTTGTCAGTGTTTCTGTAGAAAGAATCATTTCTGCCTAACTGCTACTCCGTTTCACACTCAACGTCGGTTCTCGATTTCAATTTCCCGATAATCATATTTCCATTGAATTTGTAGGTTTTCAATCTTCTTTATTTGTGTTTCAGGATCGGTGTGAAAAGTAGATTGTGATGGCGCTGAGAGGGAGAAAACTCTCTGCTCGAGGGGAATCAATGGCGGCAAATTATGCTTTTGGACCTCTCGAAGATGATGTTATCATAAAACACAGGCTTCTCACCCGGACAACGACCACCAGGGGGGAACCTCCATTGAAGAAGCTCCAGAAGAAGTTCACTTCCTTTGTTCTTGAGATTGAAAAGGATGGGAATAGCTACGATGACTGCGAGAAGCTATCCAGAGCTTTCTTACAAGAGCTGTCCACATTTGAAATTCCTTTGCTCAAGAGTAAAGCAGTTGTCGATGCGAACATTAGGGAAAAAGAGAGCTTCCATGAGTTTAAGGATGAGATAAACAGGCAAATTTTGTTATCTCAGGGTGATATTGAAGATCTTAAGAAGCAGCTTGAAGAAAGCAAAATTGAGAGGAAACACAAGGAGGAGTGTGAGGCAATTAGGAAGCTTATAGCAGCACAGCCGCCCAGGTCTGTGACACAAAAGAGTATTATGGAGTTAGAGAAAGAGATTGCGGCACTTGATGCGGAGAACACAGCAAGTTCTAGGATGCTGGAGCTTCGCAAGAAACAATTTGCCCTTCTTTTGCATGTGGTATGTTTCCATCATCAATGTTATTATAGTTATATTAGGGTCTTTTCATTTGAAGCTTCATTAGTTTAGATTTTGGTTCTCCACCATCACCATTTTTGCACTATTGTGTTGTCTTGAGATTCTTAGATAGATTGCTGCACGGAAAAGATTAAGATATCTAATTCTATCAGTGCTGGAACCCCCAAACAATGGCTCATTTAAGGAAGGATGAGAATGCTCCCATTAATTGTGTTTGCTAGTTACATTTGGTGACGGGACAACAGGAAAAATTGATTTGGTTGTAACTTTTAGTGTTCAGTCTCCAACAGCTAGGGTTCTTTTATTTGGAAATGTCTGCCAGCATAACCTGATAATATTTAAATCTAAAAGCAACCCGAAGTTGAAAATTTTGTTTTAGTAGGATTGGAACAAGCGAGGAACGAGTGACCACAAGCTCCCACTGGAGCTAAGAAAACTACGCTCTTCAAAACAATCTGCCCAAAAGTGGGAATGAGAGGGGAAGGAAGAATGGAAAGGGGGGTGGGACGGAGCTTAAGGAACCTTTCCCGGAAGGGGCCCTCCACTAGTTTCATAACATAATTGAAAGAAGTCAGAACGTATAGTAAGTGGACGGATATTCGTCGTATATCTATATTGGACTTGAGCGACAATTTTGATTTTGATAATAAAGTACTTGGTGAAGACCCCTGATTCTGGAAGACACATGAGTCTGAACGCTATGTTAACCGATATGTATTAGAGATCACTTAATTTAAGAATTTGAAGTCGGGGCTTGTCCAAGCAAATGGATGGTGGGTGACTCACCAACCGACCCAGTAGTGATCGGCATATCCTAAGAGAGGTCTACACATTAAAGAAAGGACTCATGAATGATCTTTTCCCTAGCCCTAGTGGGCGAGGACTCATGAATGACCTTTTCCCTAGCCCTAGTGGGCGGGTCTCATGAGATCGATATTAGAAATTGAATTCAAGTTATGACCTTCGTTATAGCATTTGAAAACCTCTGAACTCTCTTGTCTAGGAAGTTTAAATATATGGATTATGTGGGCATAGAACATTTGGTAGGATAGGAAACATGTGCAATTTCTGATATCCTGCGTCGGGCGTACCAAGGGTTTTTTTAACTTAGTACCTTTTATTTTTTTCGCGATGTTTCTTGGTTTGTTAGAGTTGAAACAGGGGAATACTTTTCCTTCTTTCTTTCATCAATCAAAATATTCTATTGAGAAGGTGAAATTTATAAAGAAAGAAGCCCCAGAAGTTAGCATAGTTGCTCCATATTTTGAAGAATGCCCCTCACATGAACTAAGCTTTTGGTTCTAGTTGATGAACTTCCTTTCCAACTCCAAATGATTGACTAGGCTTTAGTCATTTAGAGCAGATTACTAAGGAAATGATAGAGTCTTCCTTCTGCTGCGGACTCAAAGACAAAAAGTTGAAACTTCATCCTCCTTCGTTAAGTTACTCAAGTTTACATTTGATCTAAAATAGATTTCTTGCAAAGAATGACTTGACCACCTTGTTACCATCACCATCATTCAATCATGCTTCCAACGATGAAAAATAAGTTCTCATCCTTATGAGTGAGTCACGTATTTCTTTCCCTTAGCCTCTTTGCACAGGAGAAAGGCGAATTACCTCCTCCTTACCATCCAACTTATGAATACAAAGAACAAGGTATCCTTTAAGCTGCAATATTGCCAAGTGTCATAACCTCACTGAGAGAAAATAGGTTGTGATCCCCACACGCAAGACAGTCAATTGCCAAGTGTCATAACCTCACTGAGAGAAAATAGGTTGTGATCCCCACACGCAAGACAGTCAAGGGGCGACCCTCAAGTGGCGCCCATCCGACCACTTGAGGGTCAAGATTGAGAAGTGCCATGATGCACATACGATATGAGTGTTGAAGACAAGCTTGAAAAGGGTCGGGTAGGGCCCCGGGAGATAACCTCAGAAGTTGGGGTTTCAATATGAGTTTCGACATGTAGTTTTGGAGTTAATTTAGTTTATATGAAAGATGAAAACTCACCAAATTTGGTGTCAATCGGATACTCGACAGACAATACACGGGGCCGTATGACCACTCGCCAAAATGATATCTACTCGAGAAAGGTTGGAAATGCCTCAAAATGTACTATAGAGGGAAGAGTGGTGTTAGCTCTCCTCCACCTCTGGACCCTGTGGCATAAGTGAGCTACCCCGTGGCACATGCGTGTGTCAAAGTGAGGTCAAGTGTTGCGAGACGAGTGTCTTAGGCATCTTTCTTTGAAATGGGTTTTTTCGAGTACAGTATTGGACAGCATGGGAGTGCCAATATTGCGCTCCAGCCCATGTGTTGGAGGTTGGATTATGCACCCACTATCTAGAATGGATGCTGTAAATGGTTTAGCATGGACGGGAGAGTCCAATGCCCGATGAGAACCTAGATGGATGGATGTTCGAGATGTTCCAATGAGATGATCTAGGTCAATTCCCAACAGATGTGTCCGAGCAAGTCAAGATGGACGAGCTTCCCTAAGGCATGGAAGGACATCACGATGCATGATCATGTTGTTGGGAGTCGAGATGACGATGAGATGTGACTTTGCTTACGAGAGATCCTGGCCTAGAGCAGAGGCAAGGTCGAGCCGGATGACTTGGCTTAGTGTAGAGGCAAGTCGACTAGAGTTGCAAACAATTGAACATGCACGCACGAGCAGCGTGTGTGGCCGAACAACCTTGAATTCCTAGTAGGTTATGTTTAGTTGGCGAAGGCAAACCTCGCCTAAGGTCCGACAAAGCCACAAAGCCAGGCGAAAAAATGTGAATCGGGCTCGAGTTCTCCCTTAAGATTTGTCGTGGGCGCACGGTTGAAGTGTTAGGAATCACAGACCTCCACAATGGTATGATAATGTTCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTTGGTTTCCCCAAAAGGCCTCATACTAATGGAAATAGTGTTCCTTACTTATAAACTCATGATTTTCCTCTTAATTAGCCAATCTGGGACTACTACTTTCCATAATCCTCAACATGAAGAAGTACCATCGTGACACCAAGCACCTCAATATATTCCTGCTTGTAGTTTTTCTTTGAGCAATTACAATTAACATAGAAGCATTACTTCATCACCTGACACAAGCAGCATCCCTCGATCACACATCAGTATTGGAAGAAAATTCTTATGAGTGAGCTCATATTTGGAAGGAGGGCAACCATTGAGATCGCCGACCTCTCAAGTGATACGAGAAGGTAATTGGAAGGGGGTCCATAAATCCAAAATTCTAGAAAGAAATACCACACATGTTTGAACTTCCGACTGCAGATTTTCATGAAGCATTTGTCTACCATTGAGGTCCTGGACCCCTTGAAGTGCATCTATTTGAGTGTTATATCTGCAGCTAATTTGAAATAGATCTAATGGTCATCTGTTCCACTGTTAGCCATTCTAGAATGTATTAATCGCTCCTTCGTAGGGTTAAAACGAACTGTTGCTGCATTCTGACCCAAGGGCTTCACATGATGTAATATTACATGAAGATTTCTGGAACATGCATCCAACAAGGGACTGTCATGAAATTAGAAATTACCAACTAAAAAGAAAATTCACCCTGCTGCTCCTGGATTTGGGAAAAAGAGTTGGTTTTTTAATTATTTGTTTCGGAGGAAAAGAGAAGCATAGTGCTTCGGTGCTTTCCAGGGCAATGTCTGTTTGTGTTTCTAACTTTCTTTTTCAGGAAATGACTTCTATCATGACATATTTATAGTTTGGATCTTAACCTAACGAGGATTCACATTGTTTGTAATAGCCTAACCCCACTGCTAGGAGATATTGTCCATTTCGGAACCCTTTCGGACTTTCTCTCAAGAATTTTTAAAACACGTCTGCTAGGGAGAGGTTTCCAGACACTTATAAAGAATAATTAATGATTTGTTCTCTTCCCCAACCGATATGGGATCTTGCAATTTTCCCCTTTTCTTTTCCAATAATTGTGTGTGCGTGTACTTTTTCATTAATTTATCTTTAGAATTGTTGTCACACAACTGAACATTGTGGCTAAATAATTGTTGTCTGGCTTTGATTGTTCACAAACTTTGTAGCTGATGCTTGAAATGCTCAACTATATCGGTGCAGGTGGATGAGTTGCAAAATACCATAGAGGATGAACAGAAGAGTTTAATGGAGGAAATAAGAATCACAAGTGAGGAGAATAAGATCGGTGTAGACGAGGCTAGTGGAGGCCTGGAAGCCATGGCTGTCGACTGAGACCATTCTGTAAAACTTGTATGCTTAGGTTTTTTTTTACAGTTCAATATCAAAGATATTATGTTATCTGGAAATCTTGCTCAAGTTGAGAAATGAAAATGCAAATGGAGTTGGATCTTCAATATATTCTCCTCTTAGGCCAATCAAATCAAGTAGAACCTTGTTCTTTATTCTTAGGCATTATACGTGAAAGACATGCAATTG

mRNA sequence

GAATTTCGCTTTCCATGATCTTCCGTTGTCAGTGTTTCTGTAGAAAGAATCAGAATTTCGCTTTCCATGATCTTCCGTTGTCAGTGTTTCTGTAGAAAGAATCATTTCTGCCTAACTGCTACTCCGTTTCACACTCAACGATCGGTGTGAAAAGTAGATTGTGATGGCGCTGAGAGGGAGAAAACTCTCTGCTCGAGGGGAATCAATGGCGGCAAATTATGCTTTTGGACCTCTCGAAGATGATGTTATCATAAAACACAGGCTTCTCACCCGGACAACGACCACCAGGGGGGAACCTCCATTGAAGAAGCTCCAGAAGAAGTTCACTTCCTTTGTTCTTGAGATTGAAAAGGATGGGAATAGCTACGATGACTGCGAGAAGCTATCCAGAGCTTTCTTACAAGAGCTGTCCACATTTGAAATTCCTTTGCTCAAGAGTAAAGCAGTTGTCGATGCGAACATTAGGGAAAAAGAGAGCTTCCATGAGTTTAAGGATGAGATAAACAGGCAAATTTTGTTATCTCAGGGTGATATTGAAGATCTTAAGAAGCAGCTTGAAGAAAGCAAAATTGAGAGGAAACACAAGGAGGAGTGTGAGGCAATTAGGAAGCTTATAGCAGCACAGCCGCCCAGGTCTGTGACACAAAAGAGTATTATGGAGTTAGAGAAAGAGATTGCGGCACTTGATGCGGAGAACACAGCAAGTTCTAGGATGCTGGAGCTTCGCAAGAAACAATTTGCCCTTCTTTTGCATGTGGTGGATGAGTTGCAAAATACCATAGAGGATGAACAGAAGAGTTTAATGGAGGAAATAAGAATCACAAGTGAGGAGAATAAGATCGGTGTAGACGAGGCTAGTGGAGGCCTGGAAGCCATGGCTGTCGACTGAGACCATTCTGTAAAACTTGTATGCTTAGGTTTTTTTTTACAGTTCAATATCAAAGATATTATGTTATCTGGAAATCTTGCTCAAGTTGAGAAATGAAAATGCAAATGGAGTTGGATCTTCAATATATTCTCCTCTTAGGCCAATCAAATCAAGTAGAACCTTGTTCTTTATTCTTAGGCATTATACGTGAAAGACATGCAATTG

Coding sequence (CDS)

ATGGCGCTGAGAGGGAGAAAACTCTCTGCTCGAGGGGAATCAATGGCGGCAAATTATGCTTTTGGACCTCTCGAAGATGATGTTATCATAAAACACAGGCTTCTCACCCGGACAACGACCACCAGGGGGGAACCTCCATTGAAGAAGCTCCAGAAGAAGTTCACTTCCTTTGTTCTTGAGATTGAAAAGGATGGGAATAGCTACGATGACTGCGAGAAGCTATCCAGAGCTTTCTTACAAGAGCTGTCCACATTTGAAATTCCTTTGCTCAAGAGTAAAGCAGTTGTCGATGCGAACATTAGGGAAAAAGAGAGCTTCCATGAGTTTAAGGATGAGATAAACAGGCAAATTTTGTTATCTCAGGGTGATATTGAAGATCTTAAGAAGCAGCTTGAAGAAAGCAAAATTGAGAGGAAACACAAGGAGGAGTGTGAGGCAATTAGGAAGCTTATAGCAGCACAGCCGCCCAGGTCTGTGACACAAAAGAGTATTATGGAGTTAGAGAAAGAGATTGCGGCACTTGATGCGGAGAACACAGCAAGTTCTAGGATGCTGGAGCTTCGCAAGAAACAATTTGCCCTTCTTTTGCATGTGGTGGATGAGTTGCAAAATACCATAGAGGATGAACAGAAGAGTTTAATGGAGGAAATAAGAATCACAAGTGAGGAGAATAAGATCGGTGTAGACGAGGCTAGTGGAGGCCTGGAAGCCATGGCTGTCGACTGA

Protein sequence

MALRGRKLSARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEKDGNSYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLSQGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENTASSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMAVD

Homology

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BLAST of Carg24042 vs. NCBI nr
Match: XP_022948190.1 (THO complex subunit 7A-like [Cucurbita moschata] >KAG7035142.1 THO complex subunit 7A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 451.8 bits (1161), Expect = 3.6e-123
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MALRGRKLSARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60
           MALRGRKLSARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE
Sbjct: 1   MALRGRKLSARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60

Query: 61  IEKDGNSYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLS 120
           IEKDGNSYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLS
Sbjct: 61  IEKDGNSYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLS 120

Query: 121 QGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENTA 180
           QGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENTA
Sbjct: 121 QGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENTA 180

Query: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMAV 240
           SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMAV
Sbjct: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMAV 240

Query: 241 D 242
           D
Sbjct: 241 D 241

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BLAST of Carg24042 vs. NCBI nr
Match: XP_023532127.1 (THO complex subunit 7A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 445.3 bits (1144), Expect = 3.4e-121
Identity = 237/241 (98.34%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 1   MALRGRKLSARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60
           MALRGRK+SARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKL KKFTSFVLE
Sbjct: 1   MALRGRKVSARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLLKKFTSFVLE 60

Query: 61  IEKDGNSYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLS 120
           IEKDGN+YDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLS
Sbjct: 61  IEKDGNNYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLS 120

Query: 121 QGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENTA 180
           QGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALD ENTA
Sbjct: 121 QGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDVENTA 180

Query: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMAV 240
           SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMAV
Sbjct: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMAV 240

Query: 241 D 242
           D
Sbjct: 241 D 241

[Close]

BLAST of Carg24042 vs. NCBI nr
Match: XP_023007527.1 (THO complex subunit 7A-like [Cucurbita maxima])

HSP 1 Score: 438.3 bits (1126), Expect = 4.2e-119
Identity = 236/241 (97.93%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 1   MALRGRKLSARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60
           MALRGRK+SARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE
Sbjct: 1   MALRGRKVSARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60

Query: 61  IEKDGNSYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLS 120
           IEKDGN+YDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLS
Sbjct: 61  IEKDGNNYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLS 120

Query: 121 QGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENTA 180
           QGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAAL+AENTA
Sbjct: 121 QGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALNAENTA 180

Query: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMAV 240
           SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASG  EAMAV
Sbjct: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASG--EAMAV 239

Query: 241 D 242
           D
Sbjct: 241 D 239

[Close]

BLAST of Carg24042 vs. NCBI nr
Match: XP_022148578.1 (THO complex subunit 7A [Momordica charantia])

HSP 1 Score: 427.6 bits (1098), Expect = 7.3e-116
Identity = 224/241 (92.95%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 1   MALRGRKLSARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60
           M++RGRK+SARGE++AANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFV+E
Sbjct: 1   MSVRGRKVSARGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVIE 60

Query: 61  IEKDGNSYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLS 120
           IEKDG++YDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILL+
Sbjct: 61  IEKDGSNYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLA 120

Query: 121 QGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENTA 180
           Q DIEDLKKQLEESKIER+HKEECEAIRKLIAAQPPRSVTQK IMELEKEIAALDAENTA
Sbjct: 121 QDDIEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKIIMELEKEIAALDAENTA 180

Query: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMAV 240
           SSRMLELRKKQF+LLLHVVDELQNTIEDEQKSLMEE+RIT+EE+KIGVD+ASGGLEAMAV
Sbjct: 181 SSRMLELRKKQFSLLLHVVDELQNTIEDEQKSLMEEMRITAEEHKIGVDDASGGLEAMAV 240

Query: 241 D 242
           D
Sbjct: 241 D 241

[Close]

BLAST of Carg24042 vs. NCBI nr
Match: KAG6605148.1 (THO complex subunit 7B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 426.8 bits (1096), Expect = 1.3e-115
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 15  MAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEKDGNSYDDCEKL 74
           MAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEKDGNSYDDCEKL
Sbjct: 1   MAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEKDGNSYDDCEKL 60

Query: 75  SRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLSQGDIEDLKKQLEES 134
           SRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLSQGDIEDLKKQLEES
Sbjct: 61  SRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLSQGDIEDLKKQLEES 120

Query: 135 KIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENTASSRMLELRKKQFAL 194
           KIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENTASSRMLELRKKQFAL
Sbjct: 121 KIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENTASSRMLELRKKQFAL 180

Query: 195 LLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMAVD 242
           LLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMAVD
Sbjct: 181 LLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMAVD 227

[Close]

BLAST of Carg24042 vs. ExPASy Swiss-Prot
Match: Q8LDS5 (THO complex subunit 7A OS=Arabidopsis thaliana OX=3702 GN=THO7A PE=1 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 3.8e-83
Identity = 168/242 (69.42%), Postives = 204/242 (84.30%), Query Frame = 0


Query: 1   MALRGRKL-SARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVL 60
           M++R R++ S R E++AANYAF PL DD II++RLLTRTTTTRGEPPLKKLQKKFTSFV+
Sbjct: 1   MSVRARRIVSGRSETVAANYAFDPLHDDKIIRNRLLTRTTTTRGEPPLKKLQKKFTSFVI 60

Query: 61  EIEKDGNSYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILL 120
           E++K+ ++Y +C +L++AFLQELS FEIPLLKS+ VV AN+REKE+F+E KDE NRQI+ 
Sbjct: 61  ELDKEEDNYSECGRLAKAFLQELSAFEIPLLKSQVVVAANLREKENFNELKDETNRQIMQ 120

Query: 121 SQGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENT 180
           +Q DIEDLKKQLEESKIER+ KEECEAIRKLI+AQPPRS TQK I EL+KEIA L+AENT
Sbjct: 121 AQADIEDLKKQLEESKIERQQKEECEAIRKLISAQPPRSETQKVIHELKKEIAELEAENT 180

Query: 181 ASSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMA 240
           AS R+LELRKKQFALLLHVVDELQ T+EDEQKS++EE+     +  I  D    G EAM+
Sbjct: 181 ASWRLLELRKKQFALLLHVVDELQETMEDEQKSMVEEM-----QRNITAD----GAEAMS 233

Query: 241 VD 242
           +D
Sbjct: 241 ID 233

[Close]

BLAST of Carg24042 vs. ExPASy Swiss-Prot
Match: Q9M8T6 (THO complex subunit 7B OS=Arabidopsis thaliana OX=3702 GN=THO7B PE=1 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 6.5e-83
Identity = 162/234 (69.23%), Postives = 202/234 (86.32%), Query Frame = 0


Query: 1   MALRGRKLSARGESMA--ANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFV 60
           M+++ R++S R E++    NYAF P++DD II++RLLTRTTTTRGEPPLKKLQKKFTSFV
Sbjct: 1   MSVKARRISGRLETVVTKVNYAFDPVDDDKIIRNRLLTRTTTTRGEPPLKKLQKKFTSFV 60

Query: 61  LEIEKDGNSYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQIL 120
           LE++K+  +Y+DC +L++AFLQELSTFEIPLLKS+AVV+AN+REKESF+E KDE  RQI+
Sbjct: 61  LEVDKEEENYNDCGRLAKAFLQELSTFEIPLLKSQAVVEANLREKESFNEVKDETERQIM 120

Query: 121 LSQGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAEN 180
            ++ +IEDLKKQLEESKI+R+HKEECE IRKLI+AQPPRS T+K I EL KEIA L+AE+
Sbjct: 121 QAKAEIEDLKKQLEESKIDRQHKEECETIRKLISAQPPRSETEKVIYELNKEIAELEAES 180

Query: 181 TASSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEAS 233
           TAS R+LELRKKQFALL+HVVDELQNT+EDEQKSL++EIR  SE+ +   D  S
Sbjct: 181 TASWRLLELRKKQFALLMHVVDELQNTMEDEQKSLVDEIRSASEDQRNITDAMS 234

[Close]

BLAST of Carg24042 vs. ExPASy Swiss-Prot
Match: Q7SZ78 (THO complex subunit 7 homolog OS=Xenopus laevis OX=8355 GN=thoc7 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.3e-14
Identity = 61/195 (31.28%), Postives = 99/195 (50.77%), Query Frame = 0


Query: 22  GPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEKDGNSYDDCEKLSRAFLQE 81
           G + DD +I+ RLL        +  +  L K F  +      +  S ++     +  L  
Sbjct: 2   GAVTDDEVIRKRLLIDGDGAGDDRRINLLVKSFVKWC-----NSGSQEEGYSQYQRMLSS 61

Query: 82  LSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLSQGDIEDLKKQLEESKIERKHK 141
           LS  E  + K+  V D N+RE E++ +   +I   I  +   I + KKQ+ ++K  RK++
Sbjct: 62  LSQCEYSMGKTLLVHDMNLREMENYEKIYVDIESSIAAAHEKIAECKKQILQAKRIRKNR 121

Query: 142 EECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENTASSRMLELRKKQFALLLHVVDE 201
           +E +A+ K+I   P R  T K +  L+KE+  L      +   LELR+KQF +LL  + E
Sbjct: 122 QEYDALAKVIEQHPDRHETLKQLEALDKELKQLSHTKENAEDKLELRRKQFHVLLSTIHE 181

Query: 202 LQNTIEDEQKSLMEE 217
           LQ T+E++ K L EE
Sbjct: 182 LQQTLENDDK-LAEE 190

[Close]

BLAST of Carg24042 vs. ExPASy Swiss-Prot
Match: A7RX34 (THO complex subunit 7 homolog OS=Nematostella vectensis OX=45351 GN=thoc7 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.7e-14
Identity = 61/188 (32.45%), Postives = 97/188 (51.60%), Query Frame = 0


Query: 24  LEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEKDGNSYDDCEKLS-RAFLQEL 83
           + DD +I+ RLL        +  +  L K F  +        NS DD    S +  L +L
Sbjct: 1   MADDEVIRKRLLIDGEGVGDDRRITTLMKTFVKWC-------NSTDDDNDASYQKLLAQL 60

Query: 84  STFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLSQGDIEDLKKQLEESKIERKHKE 143
           +  E  + K++ V   N RE E++ +   E+ + I  +  +I   K  L+E+K  R++K+
Sbjct: 61  AQCEFAMGKTEMVHAMNERETENYEKAYKEVEQSITHAYEEIATCKTNLQEAKRIRRNKQ 120

Query: 144 ECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENTASSRMLELRKKQFALLLHVVDEL 203
           E +A+ K I   P R  T + I ELEK++ +L     +    LELRKKQF LL++ + EL
Sbjct: 121 EYDALAKEITKHPERQETTRQISELEKDLNSLTETKESLVSKLELRKKQFYLLINTIHEL 180

Query: 204 QNTIEDEQ 211
           Q  I+DE+
Sbjct: 181 QRMIDDEK 181

[Close]

BLAST of Carg24042 vs. ExPASy Swiss-Prot
Match: Q6P643 (THO complex subunit 7 homolog OS=Xenopus tropicalis OX=8364 GN=thoc7 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.9e-14
Identity = 63/195 (32.31%), Postives = 97/195 (49.74%), Query Frame = 0


Query: 22  GPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEKDGNSYDDCEKLSRAFLQE 81
           G + DD +I+ RLL        +  +  L K F  +        NS    E   +  L  
Sbjct: 2   GAVTDDEVIRKRLLIDGDGAGDDRRINLLVKSFLKWC-------NSGSQEEGQYQRMLSS 61

Query: 82  LSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLSQGDIEDLKKQLEESKIERKHK 141
           LS  E  + K+  V D N+RE E++ +   +I   I  +   I + KKQ+ ++K  RK++
Sbjct: 62  LSQCEFSMGKTLLVHDMNLREMENYEKIYVDIESSIAAAHEKIAECKKQILQAKRIRKNR 121

Query: 142 EECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENTASSRMLELRKKQFALLLHVVDE 201
           +E +A+ K+I   P R  T K +  L+KE+  L          LELR+KQF +LL  + E
Sbjct: 122 QEYDALAKVIQQHPDRHETLKQLEALDKELKQLSHTKENVEDKLELRRKQFHVLLSTIHE 181

Query: 202 LQNTIEDEQKSLMEE 217
           LQ T+E++ K L EE
Sbjct: 182 LQQTLENDDK-LAEE 188

[Close]

BLAST of Carg24042 vs. ExPASy TrEMBL
Match: A0A6J1G916 (THO complex subunit 7A-like OS=Cucurbita moschata OX=3662 GN=LOC111451841 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.8e-123
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MALRGRKLSARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60
           MALRGRKLSARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE
Sbjct: 1   MALRGRKLSARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60

Query: 61  IEKDGNSYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLS 120
           IEKDGNSYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLS
Sbjct: 61  IEKDGNSYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLS 120

Query: 121 QGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENTA 180
           QGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENTA
Sbjct: 121 QGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENTA 180

Query: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMAV 240
           SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMAV
Sbjct: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMAV 240

Query: 241 D 242
           D
Sbjct: 241 D 241

[Close]

BLAST of Carg24042 vs. ExPASy TrEMBL
Match: A0A6J1KYY8 (THO complex subunit 7A-like OS=Cucurbita maxima OX=3661 GN=LOC111499991 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 2.0e-119
Identity = 236/241 (97.93%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 1   MALRGRKLSARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60
           MALRGRK+SARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE
Sbjct: 1   MALRGRKVSARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60

Query: 61  IEKDGNSYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLS 120
           IEKDGN+YDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLS
Sbjct: 61  IEKDGNNYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLS 120

Query: 121 QGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENTA 180
           QGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAAL+AENTA
Sbjct: 121 QGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALNAENTA 180

Query: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMAV 240
           SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASG  EAMAV
Sbjct: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASG--EAMAV 239

Query: 241 D 242
           D
Sbjct: 241 D 239

[Close]

BLAST of Carg24042 vs. ExPASy TrEMBL
Match: A0A6J1D4G9 (THO complex subunit 7A OS=Momordica charantia OX=3673 GN=LOC111017210 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.6e-116
Identity = 224/241 (92.95%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 1   MALRGRKLSARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60
           M++RGRK+SARGE++AANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFV+E
Sbjct: 1   MSVRGRKVSARGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVIE 60

Query: 61  IEKDGNSYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLS 120
           IEKDG++YDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILL+
Sbjct: 61  IEKDGSNYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLA 120

Query: 121 QGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENTA 180
           Q DIEDLKKQLEESKIER+HKEECEAIRKLIAAQPPRSVTQK IMELEKEIAALDAENTA
Sbjct: 121 QDDIEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKIIMELEKEIAALDAENTA 180

Query: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMAV 240
           SSRMLELRKKQF+LLLHVVDELQNTIEDEQKSLMEE+RIT+EE+KIGVD+ASGGLEAMAV
Sbjct: 181 SSRMLELRKKQFSLLLHVVDELQNTIEDEQKSLMEEMRITAEEHKIGVDDASGGLEAMAV 240

Query: 241 D 242
           D
Sbjct: 241 D 241

[Close]

BLAST of Carg24042 vs. ExPASy TrEMBL
Match: A0A6J1FSD4 (THO complex subunit 7A-like OS=Cucurbita moschata OX=3662 GN=LOC111448358 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.8e-115
Identity = 222/241 (92.12%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 1   MALRGRKLSARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60
           M++RGRK+S RGE++AA+YAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE
Sbjct: 1   MSVRGRKVSTRGEAVAASYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60

Query: 61  IEKDGNSYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLS 120
           IEKDG+++DDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILL+
Sbjct: 61  IEKDGSNHDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLA 120

Query: 121 QGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENTA 180
           Q DIEDLKKQLEESKIER+HKEECEAIRKL+AAQPPRSVTQK+I+ELEKEIAALDAENTA
Sbjct: 121 QDDIEDLKKQLEESKIERQHKEECEAIRKLVAAQPPRSVTQKTIVELEKEIAALDAENTA 180

Query: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMAV 240
           SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEE+RIT+EENKIGVD+ASGGLEAMAV
Sbjct: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEMRITAEENKIGVDDASGGLEAMAV 240

Query: 241 D 242
           D
Sbjct: 241 D 241

[Close]

BLAST of Carg24042 vs. ExPASy TrEMBL
Match: A0A6J1JBL9 (THO complex subunit 7A-like OS=Cucurbita maxima OX=3661 GN=LOC111484290 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 2.0e-114
Identity = 220/241 (91.29%), Postives = 237/241 (98.34%), Query Frame = 0


Query: 1   MALRGRKLSARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60
           M++RGRK+S RGE++AA+YAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE
Sbjct: 1   MSVRGRKVSTRGEAVAASYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60

Query: 61  IEKDGNSYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLS 120
           IEKDG+++DDCEKLSRAFLQELSTFEIPLLKSKAVVD NIREKESFHEFKDEINRQILL+
Sbjct: 61  IEKDGSNHDDCEKLSRAFLQELSTFEIPLLKSKAVVDTNIREKESFHEFKDEINRQILLA 120

Query: 121 QGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENTA 180
           Q DIEDLKKQLEESKIER+HKEECEAIRKL+AAQPPRSVTQK+I+ELEKEIAALDAENTA
Sbjct: 121 QDDIEDLKKQLEESKIERQHKEECEAIRKLVAAQPPRSVTQKTIVELEKEIAALDAENTA 180

Query: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMAV 240
           SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEE+R T+EENKIGVD+ASGGLEAMAV
Sbjct: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEMRTTAEENKIGVDDASGGLEAMAV 240

Query: 241 D 242
           D
Sbjct: 241 D 241

[Close]

BLAST of Carg24042 vs. TAIR 10
Match: AT5G16790.1 (Tho complex subunit 7/Mft1p )

HSP 1 Score: 309.3 bits (791), Expect = 2.7e-84
Identity = 168/242 (69.42%), Postives = 204/242 (84.30%), Query Frame = 0


Query: 1   MALRGRKL-SARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVL 60
           M++R R++ S R E++AANYAF PL DD II++RLLTRTTTTRGEPPLKKLQKKFTSFV+
Sbjct: 1   MSVRARRIVSGRSETVAANYAFDPLHDDKIIRNRLLTRTTTTRGEPPLKKLQKKFTSFVI 60

Query: 61  EIEKDGNSYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILL 120
           E++K+ ++Y +C +L++AFLQELS FEIPLLKS+ VV AN+REKE+F+E KDE NRQI+ 
Sbjct: 61  ELDKEEDNYSECGRLAKAFLQELSAFEIPLLKSQVVVAANLREKENFNELKDETNRQIMQ 120

Query: 121 SQGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAENT 180
           +Q DIEDLKKQLEESKIER+ KEECEAIRKLI+AQPPRS TQK I EL+KEIA L+AENT
Sbjct: 121 AQADIEDLKKQLEESKIERQQKEECEAIRKLISAQPPRSETQKVIHELKKEIAELEAENT 180

Query: 181 ASSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMA 240
           AS R+LELRKKQFALLLHVVDELQ T+EDEQKS++EE+     +  I  D    G EAM+
Sbjct: 181 ASWRLLELRKKQFALLLHVVDELQETMEDEQKSMVEEM-----QRNITAD----GAEAMS 233

Query: 241 VD 242
           +D
Sbjct: 241 ID 233

[Close]

BLAST of Carg24042 vs. TAIR 10
Match: AT3G02950.1 (Tho complex subunit 7/Mft1p )

HSP 1 Score: 308.5 bits (789), Expect = 4.6e-84
Identity = 162/234 (69.23%), Postives = 202/234 (86.32%), Query Frame = 0


Query: 1   MALRGRKLSARGESMA--ANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFV 60
           M+++ R++S R E++    NYAF P++DD II++RLLTRTTTTRGEPPLKKLQKKFTSFV
Sbjct: 1   MSVKARRISGRLETVVTKVNYAFDPVDDDKIIRNRLLTRTTTTRGEPPLKKLQKKFTSFV 60

Query: 61  LEIEKDGNSYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQIL 120
           LE++K+  +Y+DC +L++AFLQELSTFEIPLLKS+AVV+AN+REKESF+E KDE  RQI+
Sbjct: 61  LEVDKEEENYNDCGRLAKAFLQELSTFEIPLLKSQAVVEANLREKESFNEVKDETERQIM 120

Query: 121 LSQGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDAEN 180
            ++ +IEDLKKQLEESKI+R+HKEECE IRKLI+AQPPRS T+K I EL KEIA L+AE+
Sbjct: 121 QAKAEIEDLKKQLEESKIDRQHKEECETIRKLISAQPPRSETEKVIYELNKEIAELEAES 180

Query: 181 TASSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEAS 233
           TAS R+LELRKKQFALL+HVVDELQNT+EDEQKSL++EIR  SE+ +   D  S
Sbjct: 181 TASWRLLELRKKQFALLMHVVDELQNTMEDEQKSLVDEIRSASEDQRNITDAMS 234

The following BLAST results are available for this feature:

BLAST of Carg24042 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948190.1	3.6e-123	100.00	THO complex subunit 7A-like [Cucurbita moschata] >KAG7035142.1 THO complex subun...	[more]
XP_023532127.1	3.4e-121	98.34	THO complex subunit 7A-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007527.1	4.2e-119	97.93	THO complex subunit 7A-like [Cucurbita maxima]	[more]
XP_022148578.1	7.3e-116	92.95	THO complex subunit 7A [Momordica charantia]	[more]
KAG6605148.1	1.3e-115	100.00	THO complex subunit 7B, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Carg24042 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDS5	3.8e-83	69.42	THO complex subunit 7A OS=Arabidopsis thaliana OX=3702 GN=THO7A PE=1 SV=1	[more]
Q9M8T6	6.5e-83	69.23	THO complex subunit 7B OS=Arabidopsis thaliana OX=3702 GN=THO7B PE=1 SV=1	[more]
Q7SZ78	1.3e-14	31.28	THO complex subunit 7 homolog OS=Xenopus laevis OX=8355 GN=thoc7 PE=2 SV=1	[more]
A7RX34	1.7e-14	32.45	THO complex subunit 7 homolog OS=Nematostella vectensis OX=45351 GN=thoc7 PE=3 S...	[more]
Q6P643	2.9e-14	32.31	THO complex subunit 7 homolog OS=Xenopus tropicalis OX=8364 GN=thoc7 PE=2 SV=1	[more]

BLAST of Carg24042 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G916	1.8e-123	100.00	THO complex subunit 7A-like OS=Cucurbita moschata OX=3662 GN=LOC111451841 PE=4 S...	[more]
A0A6J1KYY8	2.0e-119	97.93	THO complex subunit 7A-like OS=Cucurbita maxima OX=3661 GN=LOC111499991 PE=4 SV=...	[more]
A0A6J1D4G9	3.6e-116	92.95	THO complex subunit 7A OS=Momordica charantia OX=3673 GN=LOC111017210 PE=4 SV=1	[more]
A0A6J1FSD4	1.8e-115	92.12	THO complex subunit 7A-like OS=Cucurbita moschata OX=3662 GN=LOC111448358 PE=4 S...	[more]
A0A6J1JBL9	2.0e-114	91.29	THO complex subunit 7A-like OS=Cucurbita maxima OX=3661 GN=LOC111484290 PE=4 SV=...	[more]

BLAST of Carg24042 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16790.1	2.7e-84	69.42	Tho complex subunit 7/Mft1p	[more]
AT3G02950.1	4.6e-84	69.23	Tho complex subunit 7/Mft1p	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 199..219
None	No IPR available	COILS	Coil	Coil	coord: 110..144
None	No IPR available	COILS	Coil	Coil	coord: 157..184
None	No IPR available	PANTHER	PTHR23405:SF10	THO COMPLEX SUBUNIT 7A-LIKE	coord: 4..241
None	No IPR available	PANTHER	PTHR23405	MAINTENANCE OF KILLER 16 MAK16 PROTEIN-RELATED	coord: 4..241
IPR008501	THO complex subunit 7/Mft1	PFAM	PF05615	THOC7	coord: 27..164 e-value: 1.6E-25 score: 89.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24042-RA	Carg24042-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0000445	THO complex part of transcription export complex