Carg24028 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24028
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ribosomal protein S5 family protein
Location	Carg_Chr02: 2279173 .. 2286777 (+)
RNA-Seq Expression	Carg24028
Synteny	Carg24028

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAATGTAAACCCTACACTCCCTGCATTACAGTAGCTCTTACACAAACCCCCGTCTCTGGCTTCTTTCCGGTCGCCGGCACGCTCCGCCGCCGCTTTCTTTTCTTCTCGTCTTGTCTCCGTTTCTCTCTACTGCAATCTCACTCCGCCGTACCAACAAGGCAATGTCGTTCTTGGGAAAAGATTGTATGATTGAATTGAATGATCTGTACGTTTTATGAATTTGAAGAACCCGTGTTGATGTGTGATTGAAGTTTTGGATTCGAAGAAATGGTGAACAAATCGCAAGCATTTTCTTGGTCGCGTCTGATTCTCAACCAGGTCGTGCAGCAAAACCCCATCAAAACCCCAATTCATATTTCCCGGAAAATCTCCAGTTTCGCACGCTTTCCGTTTGAGGAAATACCGAAGACTTCGGCGGCGCGTTGTTACTCTACTGCTTCAGCTAGAGTTGTGCAAGATCTTCTTGCTGAGGTGGAGAAGGAGAAGCAGAGAGAAAGGGAGCAGAGGAGAAGGGCTGGTCTTGATACCAAGGATATTGACGATGAAGATAGGGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAACTCGAGAAGGAAAAGTTAAAGGATACTGGGAACTTGAACGCCTATGAAGAGCCCTCTGATTCTGATAGTGATGAAGAAGACGAGAGGTTCAGTTCTGAATCCCTCAAAAAGAGGGTTGATGAGTTTGAGAGGAAATTCAAGAGGCATGAGGAATTGCTCAAGAACTTCACTGAGACAGGTATGACAATTTGTTTTGGATAATGTCTCCATTTCTTACATGGCTTGGATTTTGGGAATGCACAATGGTTCAAGCTTTTTTTTATGTCGTTCTTTGGTACTTGCTGCAATAGCATGTGGGTTCAAATTCTTATAACGTTCATCAGAATGCTGCTAGATTTCAGCAGTTTATTAAGTTATACCATTATCCGATCTTAACATCGGAAGATGACTTCTGTTTCTTAACCAAAAGAGAATTTATTGAACCAGATTTGTAGTTTTTGTAACTTTTGGGCTTGTGTTAAAATCTTCCTGCATCTGCAACATGTTTTTGACAGACAACATCGAGGATGCTTTCAAATGGATGAGTAAAATCGACAAGTTTGAGCAAAAGCACTTCCGGCTTCGTCCTGAATACCGAGTGATTGGTGAATTAATGAATCGCTTGAAAGTAGCAGAGGGCAAGGAAAAATTCATTCTTCAGCAAAAGTTAAATAGGGCTACGAGATTAGTGGAGTGGAAGGAAGCTTATGACCCAAATTGTCCTGCCAACTATGGAGTCATTCAACATGAACAGGTAGGTCCATCGGTTGATCTCATGGAGCAATCAGGATTTGAAAAAGAGAAGCAAATCATACAAGGGGTTGATGACGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTTAATGCTATAGATAAGAAGCTTGAAGAGAAGCTAGCAGAGCTGGATCATACCTTTGGAAAGAAAGGAAAGGTTCTAGAAGAAGAAATCCGAGATCTTGCAGAGGAGAGAAATTCTTTAACTGAGAAGAAAAGAAGGCCTCTTTATCGAAAAGTATGTTACTCCATTATCCTGTCTATGCCTTTTACATCGTCGTTTTCTGTCTTTTTAAGCAGTTAGTTCTCAGCTAAATTTGTGGATTCATTAGTTGCTAAATTTCGTCTTTATGATTTAATTTCACTGTCGTGCACCAGTATTTGAAGGTCTATGACAAAATAGTTAGAGATTAGGCATAAGTTTCTGTTTGTTTCCCTACATCTTTATGTGGTACATACTTTTTTTATTAGTTTAAAGAGAAGTATTTGTGAATATAATTCTAAACAGAGCTTCTGTGTTTCTGATTTGAAGCCTGAAGCATTCTTTCTGACTATGTTCGTTTACCATGTTTTCGAAAATACAAGAAAAAAAGCTCTCATTATTCGTGATTAGAGCTTTTGCTAACAGTGTTATAATTGGTTTCATTGAGACTCATGCGAAGTATCCTTTCGTTGGTGGGAGCGATCAATTATTCTTGAAAGTAATATTGTTCTAGATTTTTGGAGATATTTTAACACAGATATCTTTTCTCCTCTCTTATAATATGCATATATACATAGGTCAAATATGATGCATTTGGATAGTCTGCAATGTTGGTGAAATTCATATTTTTATTTTTCATTGTCATTTACTTGAAAAGAGATTTCGATGCGTATTAACCTCTTTTATATTATAGTTTATGAAATGTTTTACATTTTTTCAATAGAAGATATTAACTTCATTTGTTACAAATTTATGTCAGGGCTTTGATGTGAAATTAATTGATGTGAACAGGACTTGTAAAGTTACTAAGGTATGCAATCACCCATTTACACTTGGTATTGAAATAATACGTATTTGATGATTGTAAGCTTTGTATGATCTAGGGTGGACAAGTTATCAAATACACTGCTCTCTTGGCTTGTGGGAACTATCATGGCATTGTTGGTTATGCGAAAGCCAAAGGACCTGCAGTACCGATTGCTTTACAAAAGGTATGTTGTTTGTGCTATTCAGTAGACTCCGTTATACTTTCTGATTTAGTTTTACTGAAAATTTAAAAACTGATAAAATGCTTGAAGTTCGAGTTAGAGAATAATACAGATAGGAAATTTAATCGTTTAAGGTATATTCTGAGTGTGTTGATTGACTTGCTTTGAAAATATTTAGCTAGGTTTTAATTGAAATCCAATTGTCAATGGATGGAATCACGTGGATGGATCTATGTAAATGAGATAGAAATTGAATATGTCACGATGTCAATGTGAGAGACATTGAATTTTATTCATAAATGTTTACTTTACTATTTCACTTAATTGGTAATATTAAGTATCACAAATTTAGTTATTGTGTAGATTGACCAATGTACTTTAAAGTTCATAGTTTTAACAAAATTCCTTGTATCCTTGCCGTTTGACTTGATTATGTTATATTATTTGTTACTGTGAGCTATGCTTTGAAGACTGATCCTAATTGCCCTACAATTCTGTTGGTTGTCTAGTCCTATTCAACTATTCAAGACTTGTGAGACTCGTTTTAAAGATGATCTAAATGTTATATTTTAATTCTGAAATTTATGCTATGTGATGGTGAACTATGTTTTGAGGTTAACTCATAGTTGCCCTACAGCCTTGTGAATTGTTCTATTCCATTTCAGACTCATCAGTTTTTTTTTTTTAAATGAAAAAAAGTTGATTTTGACATGCATGTTGGAATTTAAGAACTGGGTCTTGTTCCTATTTATTGTTACATTTTCATAGTAATAACTAATTACATTTCATCTTACAAGTCGTTGAATATTAGTTTTGATGATATTTCTAATGTCATTCAATTTCTCCCTACTGAGCATAGTACTTTCAAGTCCTTTGGTGTGCAAGTTGAATGTTCCTTACCCACCTTCCTTAATTGTGGTCGATTGTCTTAGTATTCTTCTTGATACAGGTTAGGAAGATTGGCTAGTAGAATTGTTTAAGATTAGAAAGATGACACACATGTCACTCGCCTCTAATTTGTAGATGCCCCCCACATCTTCTAAACTCTTGCTGAAAGGAAAGCTAGAAATTTTTTGAAAACTTCTTGGGTCTTAAAAGTAAACCTAGAGAAATTTGTGGCTATTGGAATCCACAGATCAGCTTCGAGTTGGAGATAATTGTTCTATCTGGGTGTGCAAGGCAAGTTTACTTCCCTTTAAGTATCTATGTTTTTTGCACAGAGGAAAGCCTCTGTTTACCTCTTTTTCGATCTCCGAGTTTTGGTAAAAATCTAGTCTAGGTTCTCTCAGCGGTGTTAAAGAACATCTCAAATGATTTTTTCTGTTCCACATGTTCTCTCAATGTTCCACATTCTAGTTTTAGTGGTGAAAAAGATCAAAAAATTTTTAAAAGGACCTTTTAAGCGAAAGACTCGCTCCCGAAGATAGCAATCACTTGTTTAGATGGATTATGTTTGTCTTGACCTAAGCTTATTTAGGGATCAAGTCGGAACATGAGTAAGCACAACTAAATTTTGCTAACCAAATGGCTGTGTTTTCCTTTTTCATAGCTCGTGGATTCAAAATCTTCAAGCTTGAAAGTCTTTTGGGTAGTTCTAACATCAGAGTCAACAAGGTCAATGAAAAAAGAATAGAGCTTGGTGACCACCTACCTAAAATTTAATATTTTTCAAATTTACTTGAGAACCTAATGTAATAAGGTCTAGTGCTTGTCATGTGAGGTTAATCAATGTGTGTGCAAGTTGGCCCCAGTACTTCATGAAGATAATATATATATGGACTCGGGCCTTTTTTATTCATTTTTGAAACTACGGATGGAGGTATTTGGAGGATCCTTGTTGCAGTTCTGAGAATTTCCAATCTGTAACATTTTGGAGGCTCGACATCAGAGTATGGACCCTTGAGAAGTTCAGACCAGTCCCTGTTAATTCTTTGCTCAATTCTTTATCCAATGGCATCCATGTTTACAGCCTTCATTGTGAATGCTCCTTGGAAAATTTTCTCTTTTGGGCTCTTTACTCTCTAGGGTAAATTACATTTGTGGCCCTTGAGATTTGAACCGTGTTTCTATTTGGTCCTAAAGTTTTCAAAACTAACCCTTTTGGTTCTTGAGATTTAATTTTAGTTTCTTGAGGTCTCTGAAGTGACATTTGGATCCCTAAATTTTGAAATTGAATTAGTCCCTAAAATTTGAAATTGTTTCTAAATGGTCCCTATTAGAGTTAGTCCCCTAAAATTTGAATTAGTCCCCAAAATTCCTTTTTTTTTTTGTTTTTTTTTGTTTTTTTTTTCTCTTTAAAGGAATTCATCTCCCTTTTACTCTTGGAGTGAAGGATAGATTGGTTTTGGTCCTTAGCTTTTGTTGCAACAGTTTGAACTTGAAGCTCGAAGTTAGAGTTTTCAGTTTTTTGGATGAAACTAATTATCATCCCGGATGAGGATTTCCACCCCAATTCCCATTTCTCCGCTGGTACAAAAATGACAGTTTCCTCCTCGTTTTTGCCCATCCAGAACACTCACACAAATCCTCCGTACCATTTGCTGAATATTCAGAACTGGCTGGAAATTTTGAGGCTTTGGGGGTGGGGGAACTAAATTGATTTTAGTTATCTGCAAGGAAGATAGAGTAAAATGTACAAAGAGAGGAAACAAGTCTTATCCAAGAGGGAAGCTAATCCCTGACTCAAGCTACTTTCTCTAGCATGCCTATATCTACTACTGTCTTTGGTCCCTAGAACCTCAAAAAGGGTTTCACTTGTTTAGGCATGGTCTGTGATCAAGCCTCTTCATCACAGTGGATTAGGCATTTGGGATGGGGGGGGGGGGGGGGGGGGGACGTAAATTTTGCTTTGTTATCCAAATGGTCTTTGGCATTTTCCAGAATAGATTAACTATCCTCAGGTAAAAGGTAGTTATAAGTTTACCAAAATTAAATGGATCAACTTTCTTTTTTCTGGTTTAAAATTGCATATTATATGAAGGCTTAATCTTTTGCTTGCAAGTTTTTTTTTTTGAGTATTGTAATTTTTAGACATGAAAATTAATCCTTCAGAACGAGTATATTGCTAGTTAACAAATATGTTTTAAGAACCTTGGTGGTGTCCCAATGTGCATTGGACTTTATAGTTTTTCAGTTTACATTATTATTGTGTAGATTAATTTGATGCTTTTAAGCAGGCATATGAGAAATGTTTCCAAAATCTTCATTATGTGGAACGCCATGAGGAACACACAATTGCACATGCAATACAGACGGAATACAAAAAAACGAAGGTACTCAACCATTTCTAATTTTCTTTTCCCTGCATTAATAATAGTTCACTCGCCCTATTATCTCGGATTGAGGGGCCCTGAACCTGGAAAACACCAAAGAGATGAAATACTGCAGTGGAGGAAGCCAATGTGTTGCCCCCTCAACACACACAGGGTTGCTTGACTAAAACTGTTTCTTGTTCTAGTTCTGGACAATCCGTATCTTGTCGATTAAAATAAAATAAAAAAATAAATAACTAAATAAAAAACGAAAAAAAAAAAAAAGAAATTTCGTATAGGGTTCATTTGATAGAAACTTATGGTTTCTTTCTGTTTGTTAAGGTATATCTTTGGCCAGCATCAACTACGACAGGCATGAAAGCAGGGAAAACTGTTCAAACTGTTTTGAATCTGGCTGGTTTTAAAAATATCAAATCTAAGGTAATTTATACCTGTCCTTTATTATGGAGGTTAATAGATTATGCTTTGCTCCTTCCCCACCTCTAACTTGAGTTCAAATAATAGGTTGTTGGCTCAAGGAACCCCCACAACACTCTGAAGGCCCTCTTCAAAGCTCTGAATGCAGTAAGTAGCCATTGAGTTTACATGGCTAATATCTTCCAATCCCACATAAGATTTTTATACTTACATTTTTTGTCCATTATATTTTCCAGATCGAGACTCCAAAGGATATTCAAGAAAAGTTCGGGCGGACTGTTGTCGAGAAGTATTTGCTATAATAGGAGGTTTTTTCCCCATTCTTCTATACCGTTTTGTTTTGGTTCGAGTCTATTCATGTACTTTTGCTTCTAACTAAAAAGGCAATAAATTTCAGTTAGATGTACAAAAGGAAATATTTATGATAAGAAAACACTGTTGTATCTTCAGTTAAAGTTTTGATCATTTCCATTTTAGAACCCAGGCATGACATTGTACAACCTATAGAATAGAAGCTGTTCAAGTAAGGTTGCCATTTCCTTTACATCAATAATCAAGACAAACATCATTTTCAGCTCTTTTGATTTTTTACCTCTTTTTGCTTCTATGTTTGTTGTTACCTTAGAAAATTTAGAAAATTTAGAAGAACCAATAAAAATAAATACCCTTCAAACCAATCGATATAGTTTGGTTCGGTTTAGTTCGGTTTCATCGATTTATTTCATTATGGGTTAGTAATCTATCTTATATGAGGTCCATGATGTTGTGTAGGTGCAAATGTAGTACAATCAGTCCAAAGATCCATGTGTTAGACAATGATGCGCAAAGTGAAAAATGTATAGAGGAATTTGATCTCAGTGGCTGTCCATTTTCTTCTGAAAGTTCATTTATATGTTAACGTGGGAATAGAGTATTGATATGATCACTTGGCTTTAGCTTTATGGTATTTGTGGGTTACACGAGTTTGGAATATATCAGACAGCTGTTTTGCACACTTCTTTTAACTTTGGAATGGAATTCATAGGGACTTTGTATGACTCTTATGCTCGTAGATTTCTTCTTGTTCTATTCCTTGAAAGTTCTTTTTTCACCGTCTTCTTTGTTCTTACATTTTGTGTCTCTCAATTGAGTAGTTTTGAAATGTTCTTATTCAACGTCCAACAAAACACTTTTTAACATCTCTAAATCTGACTAGATTCCTTCTTGTTCTATTCCTTGAAAGTTCTTTTTTCACCGTGTTCTTTGTTCTTGTATTTTGTGTCTCTCAACTGAGTAGTTTTGAAATGTTTTTACTCAACGTCCAACAAACACTTCTTAACATCTCTAAATCTAACTAGATTCCTTCTTGTTCTATT

mRNA sequence

AGAAATGTAAACCCTACACTCCCTGCATTACAGTAGCTCTTACACAAACCCCCGTCTCTGGCTTCTTTCCGGTCGCCGGCACGCTCCGCCGCCGCTTTCTTTTCTTCTCGTCTTGTCTCCGTTTCTCTCTACTGCAATCTCACTCCGCCGTACCAACAAGGCAATGTCGTTCTTGGGAAAAGATTGTATGATTGAATTGAATGATCTGTACGTTTTATGAATTTGAAGAACCCGTGTTGATGTGTGATTGAAGTTTTGGATTCGAAGAAATGGTGAACAAATCGCAAGCATTTTCTTGGTCGCGTCTGATTCTCAACCAGGTCGTGCAGCAAAACCCCATCAAAACCCCAATTCATATTTCCCGGAAAATCTCCAGTTTCGCACGCTTTCCGTTTGAGGAAATACCGAAGACTTCGGCGGCGCGTTGTTACTCTACTGCTTCAGCTAGAGTTGTGCAAGATCTTCTTGCTGAGGTGGAGAAGGAGAAGCAGAGAGAAAGGGAGCAGAGGAGAAGGGCTGGTCTTGATACCAAGGATATTGACGATGAAGATAGGGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAACTCGAGAAGGAAAAGTTAAAGGATACTGGGAACTTGAACGCCTATGAAGAGCCCTCTGATTCTGATAGTGATGAAGAAGACGAGAGGTTCAGTTCTGAATCCCTCAAAAAGAGGGTTGATGAGTTTGAGAGGAAATTCAAGAGGCATGAGGAATTGCTCAAGAACTTCACTGAGACAGACAACATCGAGGATGCTTTCAAATGGATGAGTAAAATCGACAAGTTTGAGCAAAAGCACTTCCGGCTTCGTCCTGAATACCGAGTGATTGGTGAATTAATGAATCGCTTGAAAGTAGCAGAGGGCAAGGAAAAATTCATTCTTCAGCAAAAGTTAAATAGGGCTACGAGATTAGTGGAGTGGAAGGAAGCTTATGACCCAAATTGTCCTGCCAACTATGGAGTCATTCAACATGAACAGGTAGGTCCATCGGTTGATCTCATGGAGCAATCAGGATTTGAAAAAGAGAAGCAAATCATACAAGGGGTTGATGACGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTTAATGCTATAGATAAGAAGCTTGAAGAGAAGCTAGCAGAGCTGGATCATACCTTTGGAAAGAAAGGAAAGGTTCTAGAAGAAGAAATCCGAGATCTTGCAGAGGAGAGAAATTCTTTAACTGAGAAGAAAAGAAGGCCTCTTTATCGAAAAGGCTTTGATGTGAAATTAATTGATGTGAACAGGACTTGTAAAGTTACTAAGGGTGGACAAGTTATCAAATACACTGCTCTCTTGGCTTGTGGGAACTATCATGGCATTGTTGGTTATGCGAAAGCCAAAGGACCTGCAGTACCGATTGCTTTACAAAAGGCATATGAGAAATGTTTCCAAAATCTTCATTATGTGGAACGCCATGAGGAACACACAATTGCACATGCAATACAGACGGAATACAAAAAAACGAAGGTATATCTTTGGCCAGCATCAACTACGACAGGCATGAAAGCAGGGAAAACTGTTCAAACTGTTTTGAATCTGGCTGGTTTTAAAAATATCAAATCTAAGGTTGTTGGCTCAAGGAACCCCCACAACACTCTGAAGGCCCTCTTCAAAGCTCTGAATGCAATCGAGACTCCAAAGGATATTCAAGAAAAGTTCGGGCGGACTGTTGTCGAGAAGTATTTGCTATAATAGGAGGTGCAAATGTAGTACAATCAGTCCAAAGATCCATGTGTTAGACAATGATGCGCAAAGTGAAAAATGTATAGAGGAATTTGATCTCAGTGGCTGTCCATTTTCTTCTGAAAGTTCATTTATATGTTAACGTGGGAATAGAGTATTGATATGATCACTTGGCTTTAGCTTTATGGTATTTGTGGGTTACACGAGTTTGGAATATATCAGACAGCTGTTTTGCACACTTCTTTTAACTTTGGAATGGAATTCATAGGGACTTTGTATGACTCTTATGCTCGTAGATTTCTTCTTGTTCTATTCCTTGAAAGTTCTTTTTTCACCGTCTTCTTTGTTCTTACATTTTGTGTCTCTCAATTGAGTAGTTTTGAAATGTTCTTATTCAACGTCCAACAAAACACTTTTTAACATCTCTAAATCTGACTAGATTCCTTCTTGTTCTATTCCTTGAAAGTTCTTTTTTCACCGTGTTCTTTGTTCTTGTATTTTGTGTCTCTCAACTGAGTAGTTTTGAAATGTTTTTACTCAACGTCCAACAAACACTTCTTAACATCTCTAAATCTAACTAGATTCCTTCTTGTTCTATT

Coding sequence (CDS)

ATGGTGAACAAATCGCAAGCATTTTCTTGGTCGCGTCTGATTCTCAACCAGGTCGTGCAGCAAAACCCCATCAAAACCCCAATTCATATTTCCCGGAAAATCTCCAGTTTCGCACGCTTTCCGTTTGAGGAAATACCGAAGACTTCGGCGGCGCGTTGTTACTCTACTGCTTCAGCTAGAGTTGTGCAAGATCTTCTTGCTGAGGTGGAGAAGGAGAAGCAGAGAGAAAGGGAGCAGAGGAGAAGGGCTGGTCTTGATACCAAGGATATTGACGATGAAGATAGGGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAACTCGAGAAGGAAAAGTTAAAGGATACTGGGAACTTGAACGCCTATGAAGAGCCCTCTGATTCTGATAGTGATGAAGAAGACGAGAGGTTCAGTTCTGAATCCCTCAAAAAGAGGGTTGATGAGTTTGAGAGGAAATTCAAGAGGCATGAGGAATTGCTCAAGAACTTCACTGAGACAGACAACATCGAGGATGCTTTCAAATGGATGAGTAAAATCGACAAGTTTGAGCAAAAGCACTTCCGGCTTCGTCCTGAATACCGAGTGATTGGTGAATTAATGAATCGCTTGAAAGTAGCAGAGGGCAAGGAAAAATTCATTCTTCAGCAAAAGTTAAATAGGGCTACGAGATTAGTGGAGTGGAAGGAAGCTTATGACCCAAATTGTCCTGCCAACTATGGAGTCATTCAACATGAACAGGTAGGTCCATCGGTTGATCTCATGGAGCAATCAGGATTTGAAAAAGAGAAGCAAATCATACAAGGGGTTGATGACGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTTAATGCTATAGATAAGAAGCTTGAAGAGAAGCTAGCAGAGCTGGATCATACCTTTGGAAAGAAAGGAAAGGTTCTAGAAGAAGAAATCCGAGATCTTGCAGAGGAGAGAAATTCTTTAACTGAGAAGAAAAGAAGGCCTCTTTATCGAAAAGGCTTTGATGTGAAATTAATTGATGTGAACAGGACTTGTAAAGTTACTAAGGGTGGACAAGTTATCAAATACACTGCTCTCTTGGCTTGTGGGAACTATCATGGCATTGTTGGTTATGCGAAAGCCAAAGGACCTGCAGTACCGATTGCTTTACAAAAGGCATATGAGAAATGTTTCCAAAATCTTCATTATGTGGAACGCCATGAGGAACACACAATTGCACATGCAATACAGACGGAATACAAAAAAACGAAGGTATATCTTTGGCCAGCATCAACTACGACAGGCATGAAAGCAGGGAAAACTGTTCAAACTGTTTTGAATCTGGCTGGTTTTAAAAATATCAAATCTAAGGTTGTTGGCTCAAGGAACCCCCACAACACTCTGAAGGCCCTCTTCAAAGCTCTGAATGCAATCGAGACTCCAAAGGATATTCAAGAAAAGTTCGGGCGGACTGTTGTCGAGAAGTATTTGCTATAA

Protein sequence

MVNKSQAFSWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLNAYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRATRLVEWKEAYDPNCPANYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL

Homology

[Close]

BLAST of Carg24028 vs. NCBI nr
Match: KAG7035156.1 (rpsE [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 968.0 bits (2501), Expect = 3.1e-278
Identity = 500/500 (100.00%), Postives = 500/500 (100.00%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR 60
           MVNKSQAFSWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID 180
           AYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID
Sbjct: 121 AYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRATRLVEWKEAYDPNCPANYG 240
           KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRATRLVEWKEAYDPNCPANYG
Sbjct: 181 KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRATRLVEWKEAYDPNCPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
           VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360

Query: 361 QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT 420
           QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT
Sbjct: 361 QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT 420

Query: 421 EYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI 480
           EYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI
Sbjct: 421 EYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI 480

Query: 481 ETPKDIQEKFGRTVVEKYLL 501
           ETPKDIQEKFGRTVVEKYLL
Sbjct: 481 ETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Carg24028 vs. NCBI nr
Match: KAG6605165.1 (hypothetical protein SDJN03_02482, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 961.4 bits (2484), Expect = 2.9e-276
Identity = 497/500 (99.40%), Postives = 498/500 (99.60%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR 60
           MVNKSQAFSWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120
           VVQDLLAEVEKEKQ EREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQIEREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID 180
           AYEEP+DSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID
Sbjct: 121 AYEEPTDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRATRLVEWKEAYDPNCPANYG 240
           KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRA RLVEWKEAYDPNCPANYG
Sbjct: 181 KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNCPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
           VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360

Query: 361 QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT 420
           QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT
Sbjct: 361 QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT 420

Query: 421 EYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI 480
           EYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI
Sbjct: 421 EYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI 480

Query: 481 ETPKDIQEKFGRTVVEKYLL 501
           ETPKDIQEKFGRTVVEKYLL
Sbjct: 481 ETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Carg24028 vs. NCBI nr
Match: XP_023533655.1 (uncharacterized protein LOC111795451 [Cucurbita pepo subsp. pepo] >XP_023533656.1 uncharacterized protein LOC111795451 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 958.7 bits (2477), Expect = 1.9e-275
Identity = 496/500 (99.20%), Postives = 497/500 (99.40%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR 60
           MVNKSQAFSWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID 180
           AYEEPSDSDSDEEDERFSSESLKKR DEFERKFKRHEELLKNFTETDNIEDAFKWMSKID
Sbjct: 121 AYEEPSDSDSDEEDERFSSESLKKRFDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRATRLVEWKEAYDPNCPANYG 240
           KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRA RLVEWKEAYDPN PANYG
Sbjct: 181 KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNSPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
           VIQHEQVGPSVDLMEQSGFEKEKQ+IQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEKEKQMIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360

Query: 361 QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT 420
           QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT
Sbjct: 361 QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT 420

Query: 421 EYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI 480
           EYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI
Sbjct: 421 EYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI 480

Query: 481 ETPKDIQEKFGRTVVEKYLL 501
           ETPKDIQEKFGRTVVEKYLL
Sbjct: 481 ETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Carg24028 vs. NCBI nr
Match: XP_022947619.1 (uncharacterized protein LOC111451428 [Cucurbita moschata] >XP_022947620.1 uncharacterized protein LOC111451428 [Cucurbita moschata])

HSP 1 Score: 957.2 bits (2473), Expect = 5.5e-275
Identity = 495/500 (99.00%), Postives = 497/500 (99.40%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR 60
           MVNKSQAFSWSRLILNQVVQ+NPI+TPIHISRKISSFARFPFEEIPKT AARCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLILNQVVQRNPIQTPIHISRKISSFARFPFEEIPKTLAARCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID 180
           AYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID
Sbjct: 121 AYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRATRLVEWKEAYDPNCPANYG 240
           KFEQKHF LRPEYRVIGELMNRLKVAEGKEKFILQQKLNRA RLVEWKEAYDPNCPANYG
Sbjct: 181 KFEQKHFWLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNCPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
           VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360

Query: 361 QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT 420
           QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT
Sbjct: 361 QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT 420

Query: 421 EYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI 480
           EYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI
Sbjct: 421 EYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI 480

Query: 481 ETPKDIQEKFGRTVVEKYLL 501
           ETPKDIQEKFGRTVVEKYLL
Sbjct: 481 ETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Carg24028 vs. NCBI nr
Match: XP_023006975.1 (uncharacterized protein LOC111499608 [Cucurbita maxima] >XP_023006976.1 uncharacterized protein LOC111499608 [Cucurbita maxima])

HSP 1 Score: 956.1 bits (2470), Expect = 1.2e-274
Identity = 493/500 (98.60%), Postives = 497/500 (99.40%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR 60
           MVNKSQAF+WSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR
Sbjct: 1   MVNKSQAFAWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDED EDYMGVGPLIEKLEKEKLKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDGEDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID 180
           AYEEPSDSDSDEEDERFSSESLKKR DEF+RKFKRHEELLKNFTETDNIEDAFKWMSKID
Sbjct: 121 AYEEPSDSDSDEEDERFSSESLKKRFDEFKRKFKRHEELLKNFTETDNIEDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRATRLVEWKEAYDPNCPANYG 240
           KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRATRLVEWK+AYDPNCPANYG
Sbjct: 181 KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRATRLVEWKDAYDPNCPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
           VIQHEQVGPSVDLMEQSGFE+EKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEEEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360

Query: 361 QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT 420
           QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT
Sbjct: 361 QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT 420

Query: 421 EYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI 480
           EYKKTKVYLWPA TTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI
Sbjct: 421 EYKKTKVYLWPAPTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI 480

Query: 481 ETPKDIQEKFGRTVVEKYLL 501
           ETPKDIQEKFGRTVVEKYLL
Sbjct: 481 ETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Carg24028 vs. ExPASy Swiss-Prot
Match: Q1IFU9 (30S ribosomal protein S5 OS=Pseudomonas entomophila (strain L48) OX=384676 GN=rpsE PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.9e-24
Identity = 62/156 (39.74%), Postives = 95/156 (60.90%), Query Frame = 0


Query: 341 KGFDVKLIDVNRTCKVTKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCF 400
           +G+  KL+ VNR  K  KGG++  +TAL   G+  G VG+ + K   VP A+QKA E   
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQKAMEAAR 69

Query: 401 QNLHYVERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKV 460
           +N+  V+  +  T+ +A +  +  +KVY+ PAS  TG+ AG  ++ VL +AG +N+ +K 
Sbjct: 70  RNMIQVDL-KGTTLQYATKAAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKC 129

Query: 461 VGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 497
            GS NP N + A FK L A+++P+ I  K G+TV E
Sbjct: 130 YGSTNPVNVVHATFKGLKAMQSPESIAAKRGKTVEE 164

[Close]

BLAST of Carg24028 vs. ExPASy Swiss-Prot
Match: Q4K550 (30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=rpsE PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.9e-24
Identity = 61/156 (39.10%), Postives = 97/156 (62.18%), Query Frame = 0


Query: 341 KGFDVKLIDVNRTCKVTKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCF 400
           +G+  KL+ VNR  K  KGG++  +TAL   G+  G VG+ + K   VP A+QKA E   
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQKAMEAAR 69

Query: 401 QNLHYVERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKV 460
           +N+  V+ +   T+ +A+++ +  +KVY+ PAS  TG+ AG  ++ VL +AG +N+ +K 
Sbjct: 70  RNMIQVDLNGT-TLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKC 129

Query: 461 VGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 497
            GS NP N + A FK L A+++P+ I  K G++V E
Sbjct: 130 YGSTNPVNVVHATFKGLKAMQSPESIAAKRGKSVQE 164

[Close]

BLAST of Carg24028 vs. ExPASy Swiss-Prot
Match: C3K2V9 (30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=rpsE PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.9e-24
Identity = 62/156 (39.74%), Postives = 96/156 (61.54%), Query Frame = 0


Query: 341 KGFDVKLIDVNRTCKVTKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCF 400
           +G+  KL+ VNR  K  KGG++  +TAL   G+  G VG+ + K   VP A+QKA E   
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQKAMEAAR 69

Query: 401 QNLHYVERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKV 460
           +N+  V+ +   T+ +A+++ +  +KVY+ PAS  TG+ AG  ++ VL +AG +N+ +K 
Sbjct: 70  RNMIQVDLNGT-TLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKC 129

Query: 461 VGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 497
            GS NP N + A FK L A+++P+ I  K G TV E
Sbjct: 130 YGSTNPVNVVHATFKGLKAMQSPESIAAKRGLTVKE 164

[Close]

BLAST of Carg24028 vs. ExPASy Swiss-Prot
Match: Q0VSI6 (30S ribosomal protein S5 OS=Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) OX=393595 GN=rpsE PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.1e-23
Identity = 60/156 (38.46%), Postives = 93/156 (59.62%), Query Frame = 0


Query: 341 KGFDVKLIDVNRTCKVTKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCF 400
           +G   KL+ VNR  KV KGG++  +TAL   G+  G VG+ + K   VP A+QKA E   
Sbjct: 10  EGLQEKLVQVNRVAKVVKGGRIFGFTALTVVGDGKGKVGFGRGKAREVPAAIQKALEAAR 69

Query: 401 QNLHYVERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKV 460
           +N+  VE +   TI H ++  +  +KVY+ PA   TG+ AG  ++ VL +AG +N+ +K 
Sbjct: 70  RNMIQVELNGT-TIQHPMKARHGASKVYMQPADEGTGVIAGGAMRAVLEVAGVQNVLAKC 129

Query: 461 VGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 497
            GS NP N ++A F  L ++ +P+ +  K G++V E
Sbjct: 130 YGSTNPVNVVRATFNGLKSMASPESVAAKRGKSVDE 164

[Close]

BLAST of Carg24028 vs. ExPASy Swiss-Prot
Match: B4RT45 (30S ribosomal protein S5 OS=Alteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype) OX=1774373 GN=rpsE PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.1e-23
Identity = 63/151 (41.72%), Postives = 91/151 (60.26%), Query Frame = 0


Query: 346 KLIDVNRTCKVTKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHY 405
           KLI VNR  KV KGG++  +TAL   G+ +G VG+   K   VP A+QKA EK  +N+  
Sbjct: 14  KLIAVNRVSKVVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARRNMVD 73

Query: 406 VERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRN 465
           V+ +  HT+ H I+  +  +KVY+ PAS  TG+ AG  ++ VL +AG +N+ SK  GS N
Sbjct: 74  VDLN-GHTLQHPIKGRHSGSKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLSKCYGSTN 133

Query: 466 PHNTLKALFKALNAIETPKDIQEKFGRTVVE 497
           P N ++A   AL  + +P  +  K G +V E
Sbjct: 134 PINVVRATINALTEMNSPAKVAAKRGLSVEE 163

[Close]

BLAST of Carg24028 vs. ExPASy TrEMBL
Match: A0A6J1G7C4 (uncharacterized protein LOC111451428 OS=Cucurbita moschata OX=3662 GN=LOC111451428 PE=3 SV=1)

HSP 1 Score: 957.2 bits (2473), Expect = 2.7e-275
Identity = 495/500 (99.00%), Postives = 497/500 (99.40%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR 60
           MVNKSQAFSWSRLILNQVVQ+NPI+TPIHISRKISSFARFPFEEIPKT AARCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLILNQVVQRNPIQTPIHISRKISSFARFPFEEIPKTLAARCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID 180
           AYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID
Sbjct: 121 AYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRATRLVEWKEAYDPNCPANYG 240
           KFEQKHF LRPEYRVIGELMNRLKVAEGKEKFILQQKLNRA RLVEWKEAYDPNCPANYG
Sbjct: 181 KFEQKHFWLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNCPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
           VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360

Query: 361 QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT 420
           QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT
Sbjct: 361 QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT 420

Query: 421 EYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI 480
           EYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI
Sbjct: 421 EYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI 480

Query: 481 ETPKDIQEKFGRTVVEKYLL 501
           ETPKDIQEKFGRTVVEKYLL
Sbjct: 481 ETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Carg24028 vs. ExPASy TrEMBL
Match: A0A6J1KZ96 (uncharacterized protein LOC111499608 OS=Cucurbita maxima OX=3661 GN=LOC111499608 PE=3 SV=1)

HSP 1 Score: 956.1 bits (2470), Expect = 6.0e-275
Identity = 493/500 (98.60%), Postives = 497/500 (99.40%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR 60
           MVNKSQAF+WSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR
Sbjct: 1   MVNKSQAFAWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDED EDYMGVGPLIEKLEKEKLKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDGEDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID 180
           AYEEPSDSDSDEEDERFSSESLKKR DEF+RKFKRHEELLKNFTETDNIEDAFKWMSKID
Sbjct: 121 AYEEPSDSDSDEEDERFSSESLKKRFDEFKRKFKRHEELLKNFTETDNIEDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRATRLVEWKEAYDPNCPANYG 240
           KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRATRLVEWK+AYDPNCPANYG
Sbjct: 181 KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRATRLVEWKDAYDPNCPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
           VIQHEQVGPSVDLMEQSGFE+EKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEEEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360

Query: 361 QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT 420
           QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT
Sbjct: 361 QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT 420

Query: 421 EYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI 480
           EYKKTKVYLWPA TTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI
Sbjct: 421 EYKKTKVYLWPAPTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI 480

Query: 481 ETPKDIQEKFGRTVVEKYLL 501
           ETPKDIQEKFGRTVVEKYLL
Sbjct: 481 ETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Carg24028 vs. ExPASy TrEMBL
Match: A0A6J1FXC7 (DEAD-box ATP-dependent RNA helicase 42 OS=Cucurbita moschata OX=3662 GN=LOC111448419 PE=3 SV=1)

HSP 1 Score: 926.4 bits (2393), Expect = 5.1e-266
Identity = 474/500 (94.80%), Postives = 489/500 (97.80%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR 60
           MVNKSQAFSWSRL+LNQVV QNPIKTP+HISR+IS   RFPFEE PKT A RCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQRFPFEETPKTPATRCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID 180
           AYEE +DSDSDE+DERFSSES+KKR DEFERKFKRHEELLK+FTETDNI+DAFKWMSKID
Sbjct: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRATRLVEWKEAYDPNCPANYG 240
           KFEQKHFRLRPEYRVIGELMNRLK+A+GKEKFILQQKLNRA RLVEWKEAYDPN PANYG
Sbjct: 181 KFEQKHFRLRPEYRVIGELMNRLKMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
           VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360

Query: 361 QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQT 420
           QV+KY+ALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHA+QT
Sbjct: 361 QVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQT 420

Query: 421 EYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAI 480
           EYKKTKVYLWPAST+TGMKAGKTVQTVLNLAGFKN+KSKVVGSRNPHNTLKALFKALNAI
Sbjct: 421 EYKKTKVYLWPASTSTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAI 480

Query: 481 ETPKDIQEKFGRTVVEKYLL 501
           ETPKDIQEKFGRTVVEKYLL
Sbjct: 481 ETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Carg24028 vs. ExPASy TrEMBL
Match: A0A6J1D5I3 (uncharacterized protein LOC111017222 OS=Momordica charantia OX=3673 GN=LOC111017222 PE=3 SV=1)

HSP 1 Score: 883.2 bits (2281), Expect = 4.9e-253
Identity = 459/502 (91.43%), Postives = 480/502 (95.62%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPK--TSAARCYSTAS 60
           MVNKSQAFSWSRLIL+QVV QNP KTP+HI+R IS+  RFPFEEIPK   S A  YSTAS
Sbjct: 1   MVNKSQAFSWSRLILSQVV-QNPTKTPLHITRNISNLRRFPFEEIPKFSFSGAARYSTAS 60

Query: 61  ARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGN 120
           ARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDED+EDYMGVGPLIEKLEKEKLKDTG+
Sbjct: 61  ARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDQEDYMGVGPLIEKLEKEKLKDTGD 120

Query: 121 LNAYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSK 180
           LNAYEEP+DSDSDE+DERFS ES+K+R D+FERKFKRHEELLK+FTE++N++DAFKWM+K
Sbjct: 121 LNAYEEPTDSDSDEDDERFSPESVKERFDKFERKFKRHEELLKHFTESENMDDAFKWMNK 180

Query: 181 IDKFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRATRLVEWKEAYDPNCPAN 240
           IDKFEQKHF LRPEYRVIGELMNRLKVAEGKEKFILQQKLNRA RLVEWKEAYDPN PAN
Sbjct: 181 IDKFEQKHFGLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNNPAN 240

Query: 241 YGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKL 300
           YGVIQ EQVG SVDL+EQSGF KEKQIIQG DDDDEEEFDDMKERDDILLEKLNAIDKKL
Sbjct: 241 YGVIQQEQVGSSVDLLEQSGFAKEKQIIQGADDDDEEEFDDMKERDDILLEKLNAIDKKL 300

Query: 301 EEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTK 360
           EEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTK
Sbjct: 301 EEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTK 360

Query: 361 GGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAI 420
           GGQV+KYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHA+
Sbjct: 361 GGQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAV 420

Query: 421 QTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALN 480
           QT YKKTKVYLWPAST TGMKAGKTVQTVLNLAGFKN+KSKVVGSRNPHNTLKALFKALN
Sbjct: 421 QTAYKKTKVYLWPASTCTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALN 480

Query: 481 AIETPKDIQEKFGRTVVEKYLL 501
           AIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 AIETPKDIQEKFGRTVVEKYLL 501

[Close]

BLAST of Carg24028 vs. ExPASy TrEMBL
Match: A0A6J1J864 (uncharacterized protein LOC111484333 OS=Cucurbita maxima OX=3661 GN=LOC111484333 PE=3 SV=1)

HSP 1 Score: 859.0 bits (2218), Expect = 9.9e-246
Identity = 446/478 (93.31%), Postives = 458/478 (95.82%), Query Frame = 0


Query: 25  KTPIHISRKISSFARFPFEEIPKTSAARCYSTASARVVQDLLAEVEKEKQREREQRRRAG 84
           KTP+ ISRKIS   RFPFEE PKT A  CYST SARVVQD LAEVEKEKQREREQRRRAG
Sbjct: 19  KTPLQISRKISPLQRFPFEETPKTPATLCYSTTSARVVQDFLAEVEKEKQREREQRRRAG 78

Query: 85  LDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLNAYEEPSDSDSDEEDERFSSESLKK 144
           LDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLNAYEEP+DSDSDE+DERFSSES+KK
Sbjct: 79  LDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLNAYEEPTDSDSDEDDERFSSESVKK 138

Query: 145 RVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRLK 204
           R DEFERKFKRHEEL KNFTETDNI+DAFKWMSKIDKFEQKHFRLRPEY+VIGELMNRLK
Sbjct: 139 RFDEFERKFKRHEELFKNFTETDNIDDAFKWMSKIDKFEQKHFRLRPEYQVIGELMNRLK 198

Query: 205 VAEGKEKF-ILQQKLNRATRLVEWKEAYDPNCPANYGVIQHEQVGPSVDLMEQSGFEKEK 264
           VA+GK KF ILQQKLNRA RLVEWKEAYDPN PANYGVIQH++VGPSVDLME SGFEKEK
Sbjct: 199 VADGKGKFIILQQKLNRAIRLVEWKEAYDPNNPANYGVIQHKRVGPSVDLMELSGFEKEK 258

Query: 265 QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL 324
           QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL
Sbjct: 259 QIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDL 318

Query: 325 AEERNSLTEKKRRPLYRK-GFDVKLIDVNRTCKVTKGGQVIKYTALLACGNYHGIVGYAK 384
           AEERNSLTEKKRRPLYRK  FDVKLIDVNRTCKVTKGGQV+KYTALLACGNYHGIVGYAK
Sbjct: 319 AEERNSLTEKKRRPLYRKVWFDVKLIDVNRTCKVTKGGQVVKYTALLACGNYHGIVGYAK 378

Query: 385 AKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGK 444
           AKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHA+QTEYKKTKVYLWPASTTTGMKAGK
Sbjct: 379 AKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGK 438

Query: 445 TVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 501
           TVQTVLNLAGFKN+KSKVVGSRNPHN LKALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 439 TVQTVLNLAGFKNVKSKVVGSRNPHNNLKALFKALNAIETPKDIQEKFGRTVVEKYLL 496

[Close]

BLAST of Carg24028 vs. TAIR 10
Match: AT1G64880.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 619.4 bits (1596), Expect = 2.5e-177
Identity = 331/521 (63.53%), Postives = 407/521 (78.12%), Query Frame = 0


Query: 4   KSQAFSWSRLILNQVVQQNPIKTPIHISRKISSFAR----------FPFEEIPKTSAARC 63
           +++A SW RL+L +  + +  +    +    S+F R          FP  + P  S+ R 
Sbjct: 4   RTRASSWPRLLLRRNPRSSFSRQISTLDSSTSTFPRRISGYYSSSFFPVNQTPWISSQRY 63

Query: 64  YSTASA--------RVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLI 123
              +S+        RVV++L+AEVEKEKQRERE+R+R GLD KDID ED EDY+G+ P I
Sbjct: 64  RFFSSSTMSPSEADRVVRELIAEVEKEKQREREERQRQGLDYKDIDAEDEEDYLGIEPFI 123

Query: 124 EKLEKEKLKDTGNLNAYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTE 183
           EKL+K+ LKD G LN  EE SDSDS+ ++     E  +K+ D F +KF+RH+ELL+  T+
Sbjct: 124 EKLKKQNLKDDGELNRREESSDSDSEYDEIDLDEE--RKKEDIFNKKFQRHKELLQTLTK 183

Query: 184 TDNIEDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRATRLV 243
           ++ +++AF+WM+K+DKFE+KHF+LRPEYRVIGELMNRLKVAEGKEKF+LQQKLNRA RLV
Sbjct: 184 SETLDEAFRWMNKLDKFEEKHFKLRPEYRVIGELMNRLKVAEGKEKFVLQQKLNRAMRLV 243

Query: 244 EWKEAYDPNCPANYGVIQHEQVGPSVDLMEQSGFEKEKQII------QGVDDDDEEEFDD 303
           EWKEA+DPN PANYGVI+ + V       +  G E+E++++         DDDDEEEFDD
Sbjct: 244 EWKEAFDPNNPANYGVIERDNV-------QGGGEEREERLVADGPKDDNDDDDDEEEFDD 303

Query: 304 MKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLY 363
           MKERDDILLEKLNAIDKKLE KL+ELDHTFGKKGK LEEEIR+LAE+RN+LTEKKR+PLY
Sbjct: 304 MKERDDILLEKLNAIDKKLEIKLSELDHTFGKKGKRLEEEIRELAEDRNALTEKKRQPLY 363

Query: 364 RKGFDVKLIDVNRTCKVTKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKC 423
           RKG+DV +IDV + CKVTKGG+V +YTAL+ CGNY GI+GYAKAK      A+QKAYEKC
Sbjct: 364 RKGYDVHVIDVKKVCKVTKGGRVERYTALMVCGNYEGIIGYAKAKAETGQSAMQKAYEKC 423

Query: 424 FQNLHYVERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSK 483
           FQNLHYVERHEEHTIAHAIQT YKKTK+YLWPA TTTGMKAG+ V+T+L LAGFKNIKSK
Sbjct: 424 FQNLHYVERHEEHTIAHAIQTSYKKTKLYLWPAPTTTGMKAGRVVKTILLLAGFKNIKSK 483

Query: 484 VVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 501
           V+GSRN +NT+KA+ KALNA+ETPKD+QEKFGRTVVEKYLL
Sbjct: 484 VIGSRNSYNTVKAVLKALNAVETPKDVQEKFGRTVVEKYLL 515

[Close]

BLAST of Carg24028 vs. TAIR 10
Match: AT2G33800.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 89.7 bits (221), Expect = 7.0e-18
Identity = 53/159 (33.33%), Postives = 84/159 (52.83%), Query Frame = 0


Query: 333 KKRRPLYRKGFDVKLIDVNRTCKVTKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIAL 392
           K ++   R GF+ +++ V R  KV KGG+ +K+ A++  G+  G VG   AK   V  A+
Sbjct: 137 KPKKDKIRDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAV 196

Query: 393 QKAYEKCFQNLHYVERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAG 452
           QK+     +N+  V   +  T  H  + +Y   KV L PAS  TG+ AG  V+ VL +AG
Sbjct: 197 QKSAIDARRNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 256

Query: 453 FKNIKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFG 492
            +N   K +GS N  N  +A   A+  +   +D+ ++ G
Sbjct: 257 VENALGKQLGSNNALNNARATLAAVQQMRQFRDVAQERG 295

The following BLAST results are available for this feature:

BLAST of Carg24028 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035156.1	3.1e-278	100.00	rpsE [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6605165.1	2.9e-276	99.40	hypothetical protein SDJN03_02482, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023533655.1	1.9e-275	99.20	uncharacterized protein LOC111795451 [Cucurbita pepo subsp. pepo] >XP_023533656....	[more]
XP_022947619.1	5.5e-275	99.00	uncharacterized protein LOC111451428 [Cucurbita moschata] >XP_022947620.1 unchar...	[more]
XP_023006975.1	1.2e-274	98.60	uncharacterized protein LOC111499608 [Cucurbita maxima] >XP_023006976.1 uncharac...	[more]

BLAST of Carg24028 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1IFU9	2.9e-24	39.74	30S ribosomal protein S5 OS=Pseudomonas entomophila (strain L48) OX=384676 GN=rp...	[more]
Q4K550	2.9e-24	39.10	30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL ...	[more]
C3K2V9	2.9e-24	39.74	30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=...	[more]
Q0VSI6	1.1e-23	38.46	30S ribosomal protein S5 OS=Alcanivorax borkumensis (strain ATCC 700651 / DSM 11...	[more]
B4RT45	1.1e-23	41.72	30S ribosomal protein S5 OS=Alteromonas mediterranea (strain DSM 17117 / CIP 110...	[more]

BLAST of Carg24028 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7C4	2.7e-275	99.00	uncharacterized protein LOC111451428 OS=Cucurbita moschata OX=3662 GN=LOC1114514...	[more]
A0A6J1KZ96	6.0e-275	98.60	uncharacterized protein LOC111499608 OS=Cucurbita maxima OX=3661 GN=LOC111499608...	[more]
A0A6J1FXC7	5.1e-266	94.80	DEAD-box ATP-dependent RNA helicase 42 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1D5I3	4.9e-253	91.43	uncharacterized protein LOC111017222 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1J864	9.9e-246	93.31	uncharacterized protein LOC111484333 OS=Cucurbita maxima OX=3661 GN=LOC111484333...	[more]

BLAST of Carg24028 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64880.1	2.5e-177	63.53	Ribosomal protein S5 family protein	[more]
AT2G33800.1	7.0e-18	33.33	Ribosomal protein S5 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 59..86
None	No IPR available	COILS	Coil	Coil	coord: 313..336
None	No IPR available	COILS	Coil	Coil	coord: 288..308
None	No IPR available	COILS	Coil	Coil	coord: 139..166
None	No IPR available	GENE3D	3.30.160.20		coord: 293..404 e-value: 2.2E-20 score: 74.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..139
None	No IPR available	PANTHER	PTHR13718:SF61	28S RIBOSOMAL PROTEIN S5, MITOCHONDRIAL	coord: 59..500
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 338..408
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 408..497 e-value: 1.1E-27 score: 97.5
IPR013810	Ribosomal protein S5, N-terminal	PFAM	PF00333	Ribosomal_S5	coord: 343..407 e-value: 1.5E-18 score: 66.5
IPR013810	Ribosomal protein S5, N-terminal	PROSITE	PS50881	S5_DSRBD	coord: 343..406 score: 16.233612
IPR005324	Ribosomal protein S5, C-terminal	PFAM	PF03719	Ribosomal_S5_C	coord: 421..488 e-value: 5.0E-22 score: 77.1
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 59..500
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 412..490

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24028-RA	Carg24028-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0005840	ribosome
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome