Carg23391 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23391
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	PLATZ transcription factor family protein
Location	Carg_Chr06: 3283936 .. 3286055 (+)
RNA-Seq Expression	Carg23391
Synteny	Carg23391

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCTCTCTCTCCTCTTTTTCTCTCTCTAAAACCAGGCTTAAACTCTCTGTTTATCTCTGATTTTGGTTTTGGATTGCTGTGGTTTAGACTGGGTTTTCGTTCTTTTTTGATTAATTTCAAACTGGCGATCGAAAATCACGAGACGACTGTTCGTGAAATCAAGCCCAAGAACAGAAGAATCATGGTATTAAGCTTCTTGTTCTTCATTTTAATTTCCTGCATTCTGTTCTTTGCTCATCTGGGTTTTGATTCTTGCTCTGTTTTCTCTTCTGGGTTTGCCTTCTTTTTGGATTTCTCCATATGGGGATGGATGCCTTGTTCTTCGATGTTCTTCGATGTTCTTATCTGGGTTTTGATTTTCTAGTTTCACTTTCCCGCATTCAGTTTTTTCTCATCTGGGTTTTGCTTTTCAATCGATTTTTCCATCTGGGTTTTGGTTTTCCTCTGTTTTTTCTTCTTATTATGTCTGTTCTTCGTTATTTCCATCTGGGTTTTCATTATTTTCCGATTCTTTCATTAGGGTATTGCTTTTTTCCCCATTTGGGTAATGATTTTTGTTCGTTTTCCCATTAGGGTTATGATTCTTTTTCGATTTTCTCATCTGGGTCTTTCTTATTTTTTGATTCCCTCTCCTCTCCTCTCCTCTCCTCTCTGTTCTTGACATTGTTCTTGATGGATTTGATATCAACAGGGTGCTGGAGGCCCCGACGTTGAAGACAACCGCTGGCCGCCATGGCTTAAACCCCTTTTAAGAGAAAGCTTCTTCGTTCAATGCAAACACCACATCGATTCCCACAAAAGCGAATGCAATATGTACTGTTTAGATTGTATGAACGGCGCTCTCTGTTCTCTTTGCTTGAACCATCACAAGGATCATCGCGCTATACAGGTATCTCAAAATCGATATCCATTTCTCAAAACCTAATTCCAAAACCCCCAAAATTGATATCCATTTAGTCTTCTAATCGATTATGGGTTGATTTTCATTACAGATTCGAAGATCTTCGTACCACGATGTTATCAGAGTTTCTGAGATTCAAAAGGTTCTTGACATTTCTGGCGTTCAAACTTACATTATCAATAGCGCTAGAGTTGTGTTCTTGAATGAACGACCTCAGCCGCGGCCTGGTAAAGGCGTTACGAACACTTGTGAAGTCTGTGAACGCAGCCTGCTTGATTCGTTTCGATTCTGCTCTCTTGGTTGTAAGGTATTTGCTGCGTTGTTCTCTCTTGAAATTTTCTGTTTGGTTTCCGGGAAAATTGGTGAGAAAATTGGTGGGAAAATGGAGGAAAACCCAAATGGGAATCCGTGTCATCAATGTGTGTTAATTGGTTGAATTCAAACCAGTGGAGAGTCGACTTTTTCTTCCACTTGCTTAATTTTCTCGCCAACCAAACAAGTCACAAACGTTGAAAAAGAGTTAACCTAATTTTCGATTGGTTGTGTTCGTTCTCGTAGATCGTAGGCACGTCGAGGAGCTCCCAAAAGAAGAGGGTGACGATAACGGCTGCAGCCTCAGACTCGGAGGAATCCTACAGTAGCAGCAACCATAGGCGGAGCAACAGCAGCAACAACAGCAACAACAATGATATCAATAGGGTTCAGAGTTTTAGTCCATCGACGCCGCCTCCAACATCAGTGAATTATAGAACTGCGAAGCGGAGGAAGGGGATTCCACATCGAGCTCCGATGGGAAGTCTTATTATACAATATTAGTATTATATTTACTCTTTAATTATCATAAAAGCCTCGTGAAATGTAATGTAATGTAATTTCCACGATGATCTTTGCCTCCAACGCCTCGAGCCTTTGTGAAAGAGGCCAGTGTTAGGAGGCTTTACCTTCTAGCTTTGTAAATACAAGCATAGATGTGGGGGAAAAAGAAAATAATGTAAGGCAAATGTGTAAAATGGTGAAGGTTAGAGGACTAAAAGGAAAAATAAGTGGGTAGGTTTGAGTAATTATATAAATTAGGTTGGACTAATCGTCAATTATACTAAGTTTTGGGTCTTAGTTGTAAATATTGTGTGTGGTGTTTTTTTTTTTTTTTTTAATTACGCTGAAAATACAATGTAATCCTTGGAATAATGAAATTTTCATTAAGGAATGATGTTTATA

mRNA sequence

TCCCTCTCTCTCCTCTTTTTCTCTCTCTAAAACCAGGCTTAAACTCTCTGTTTATCTCTGATTTTGGTTTTGGATTGCTGTGGTTTAGACTGGGTTTTCGTTCTTTTTTGATTAATTTCAAACTGGCGATCGAAAATCACGAGACGACTGTTCGTGAAATCAAGCCCAAGAACAGAAGAATCATGGGTGCTGGAGGCCCCGACGTTGAAGACAACCGCTGGCCGCCATGGCTTAAACCCCTTTTAAGAGAAAGCTTCTTCGTTCAATGCAAACACCACATCGATTCCCACAAAAGCGAATGCAATATGTACTGTTTAGATTGTATGAACGGCGCTCTCTGTTCTCTTTGCTTGAACCATCACAAGGATCATCGCGCTATACAGATTCGAAGATCTTCGTACCACGATGTTATCAGAGTTTCTGAGATTCAAAAGGTTCTTGACATTTCTGGCGTTCAAACTTACATTATCAATAGCGCTAGAGTTGTGTTCTTGAATGAACGACCTCAGCCGCGGCCTGGTAAAGGCGTTACGAACACTTGTGAAGTCTGTGAACGCAGCCTGCTTGATTCGTTTCGATTCTGCTCTCTTGGTTGTAAGATCGTAGGCACGTCGAGGAGCTCCCAAAAGAAGAGGGTGACGATAACGGCTGCAGCCTCAGACTCGGAGGAATCCTACAGTAGCAGCAACCATAGGCGGAGCAACAGCAGCAACAACAGCAACAACAATGATATCAATAGGGTTCAGAGTTTTAGTCCATCGACGCCGCCTCCAACATCAGTGAATTATAGAACTGCGAAGCGGAGGAAGGGGATTCCACATCGAGCTCCGATGGGAAGTCTTATTATACAATATTAGTATTATATTTACTCTTTAATTATCATAAAAGCCTCGTGAAATGTAATGTAATGTAATTTCCACGATGATCTTTGCCTCCAACGCCTCGAGCCTTTGTGAAAGAGGCCAGTGTTAGGAGGCTTTACCTTCTAGCTTTGTAAATACAAGCATAGATGTGGGGGAAAAAGAAAATAATGTAAGGCAAATGTGTAAAATGGTGAAGGTTAGAGGACTAAAAGGAAAAATAAGTGGGTAGGTTTGAGTAATTATATAAATTAGGTTGGACTAATCGTCAATTATACTAAGTTTTGGGTCTTAGTTGTAAATATTGTGTGTGGTGTTTTTTTTTTTTTTTTTAATTACGCTGAAAATACAATGTAATCCTTGGAATAATGAAATTTTCATTAAGGAATGATGTTTATA

Coding sequence (CDS)

ATGGGTGCTGGAGGCCCCGACGTTGAAGACAACCGCTGGCCGCCATGGCTTAAACCCCTTTTAAGAGAAAGCTTCTTCGTTCAATGCAAACACCACATCGATTCCCACAAAAGCGAATGCAATATGTACTGTTTAGATTGTATGAACGGCGCTCTCTGTTCTCTTTGCTTGAACCATCACAAGGATCATCGCGCTATACAGATTCGAAGATCTTCGTACCACGATGTTATCAGAGTTTCTGAGATTCAAAAGGTTCTTGACATTTCTGGCGTTCAAACTTACATTATCAATAGCGCTAGAGTTGTGTTCTTGAATGAACGACCTCAGCCGCGGCCTGGTAAAGGCGTTACGAACACTTGTGAAGTCTGTGAACGCAGCCTGCTTGATTCGTTTCGATTCTGCTCTCTTGGTTGTAAGATCGTAGGCACGTCGAGGAGCTCCCAAAAGAAGAGGGTGACGATAACGGCTGCAGCCTCAGACTCGGAGGAATCCTACAGTAGCAGCAACCATAGGCGGAGCAACAGCAGCAACAACAGCAACAACAATGATATCAATAGGGTTCAGAGTTTTAGTCCATCGACGCCGCCTCCAACATCAGTGAATTATAGAACTGCGAAGCGGAGGAAGGGGATTCCACATCGAGCTCCGATGGGAAGTCTTATTATACAATATTAG

Protein sequence

MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHHKDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHRRSNSSNNSNNNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY

Homology

[Close]

BLAST of Carg23391 vs. NCBI nr
Match: KAG6596729.1 (hypothetical protein SDJN03_09909, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028263.1 hypothetical protein SDJN02_09444 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 455.3 bits (1170), Expect = 3.1e-124
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH 60
           MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH
Sbjct: 1   MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHRRSNSSNNSN 180
           EVCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHRRSNSSNNSN
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHRRSNSSNNSN 180

Query: 181 NNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 225
           NNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY
Sbjct: 181 NNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 224

[Close]

BLAST of Carg23391 vs. NCBI nr
Match: XP_022924573.1 (uncharacterized protein LOC111431990 [Cucurbita moschata])

HSP 1 Score: 453.8 bits (1166), Expect = 8.9e-124
Identity = 223/224 (99.55%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH 60
           MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH
Sbjct: 1   MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHRRSNSSNNSN 180
           EVCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHR+SNSSNNSN
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHRQSNSSNNSN 180

Query: 181 NNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 225
           NNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY
Sbjct: 181 NNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 224

[Close]

BLAST of Carg23391 vs. NCBI nr
Match: XP_023539507.1 (uncharacterized protein LOC111800150, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 448.0 bits (1151), Expect = 4.9e-122
Identity = 220/224 (98.21%), Postives = 222/224 (99.11%), Query Frame = 0


Query: 1   MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH 60
           MGAGGPDVE+NRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH
Sbjct: 69  MGAGGPDVEENRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH 128

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 129 KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 188

Query: 121 EVCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHRRSNSSNNSN 180
           EVCERSLLDSFRFCSLGCKIVGTSRSS KK+VTITAAASDSEESYSSSNHRRSNSSNNSN
Sbjct: 189 EVCERSLLDSFRFCSLGCKIVGTSRSSPKKKVTITAAASDSEESYSSSNHRRSNSSNNSN 248

Query: 181 NNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 225
           N DINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY
Sbjct: 249 NTDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 292

[Close]

BLAST of Carg23391 vs. NCBI nr
Match: XP_023005603.1 (uncharacterized protein LOC111498542 [Cucurbita maxima])

HSP 1 Score: 446.4 bits (1147), Expect = 1.4e-121
Identity = 220/224 (98.21%), Postives = 221/224 (98.66%), Query Frame = 0


Query: 1   MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH 60
           MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH
Sbjct: 1   MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHRRSNSSNNSN 180
           EVCERSLLDSFRFCSLGCKIVGTSRSSQKKR  I AAASDSEESYSSSNHRRSNS+NNSN
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGTSRSSQKKRGHIMAAASDSEESYSSSNHRRSNSNNNSN 180

Query: 181 NNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 225
           NNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY
Sbjct: 181 NNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 224

[Close]

BLAST of Carg23391 vs. NCBI nr
Match: XP_023553129.1 (uncharacterized protein LOC111810627 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 403.3 bits (1035), Expect = 1.4e-108
Identity = 201/230 (87.39%), Postives = 210/230 (91.30%), Query Frame = 0


Query: 1   MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH 60
           MGAGGPD EDNRWPPWLKPLLRE+FFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLN H
Sbjct: 1   MGAGGPDDEDNRWPPWLKPLLRETFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGTSRSSQKKR------VTITAAASDSEESYSSSNHRRSN 180
           EVCERSLLDSFRFCSLGCKIVGTSRS QKKR      V  T A SDSE+SYSSSNHRRS 
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGTSRSFQKKRVAGVAGVAATMAVSDSEDSYSSSNHRRSK 180

Query: 181 SSNNSNNNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 225
           S+N+ N+   N+ QSFSPSTPPPTSVNYRTAKRRKGIPHRAPMG L+++Y
Sbjct: 181 SNNSHNS---NKFQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVLEY 227

[Close]

BLAST of Carg23391 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.9e-31
Identity = 63/127 (49.61%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 14  PPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHHKDHRAIQIRRSSY 73
           P WL  L  E FFV C +H  + K+E N+ CLDC   +LC  C+  H+ HR +Q+RR  Y
Sbjct: 6   PAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCT-SLCPHCVPSHRFHRLLQVRRYVY 65

Query: 74  HDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRF 133
           HDV+R+ ++QK++D S VQ Y INSA+VVF+ +RPQ R  KG  N C  C+RSL + +  
Sbjct: 66  HDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRSLQEPYIH 125

Query: 134 CSLGCKI 141
           CSLGCK+
Sbjct: 126 CSLGCKV 131

[Close]

BLAST of Carg23391 vs. ExPASy TrEMBL
Match: A0A6J1ECV3 (uncharacterized protein LOC111431990 OS=Cucurbita moschata OX=3662 GN=LOC111431990 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 4.3e-124
Identity = 223/224 (99.55%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH 60
           MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH
Sbjct: 1   MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHRRSNSSNNSN 180
           EVCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHR+SNSSNNSN
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHRQSNSSNNSN 180

Query: 181 NNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 225
           NNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY
Sbjct: 181 NNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 224

[Close]

BLAST of Carg23391 vs. ExPASy TrEMBL
Match: A0A6J1L2M6 (uncharacterized protein LOC111498542 OS=Cucurbita maxima OX=3661 GN=LOC111498542 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 6.9e-122
Identity = 220/224 (98.21%), Postives = 221/224 (98.66%), Query Frame = 0


Query: 1   MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH 60
           MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH
Sbjct: 1   MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHRRSNSSNNSN 180
           EVCERSLLDSFRFCSLGCKIVGTSRSSQKKR  I AAASDSEESYSSSNHRRSNS+NNSN
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGTSRSSQKKRGHIMAAASDSEESYSSSNHRRSNSNNNSN 180

Query: 181 NNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 225
           NNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY
Sbjct: 181 NNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 224

[Close]

BLAST of Carg23391 vs. ExPASy TrEMBL
Match: A0A6J1HQK4 (uncharacterized protein LOC111465191 OS=Cucurbita maxima OX=3661 GN=LOC111465191 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 8.7e-109
Identity = 201/233 (86.27%), Postives = 211/233 (90.56%), Query Frame = 0


Query: 1   MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH 60
           MGAGGPD EDNRWPPWLKPLLRE+FFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLN H
Sbjct: 1   MGAGGPDDEDNRWPPWLKPLLRETFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGTSRSSQKKR------VTITAAASDSEESYSSSNHRRS- 180
           EVCERSLLDSFRFCSLGCKIVGTSR+ QKKR      V  T A SDSE+SYSSSNHRRS 
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGTSRNFQKKRVAGEAGVAATMAVSDSEDSYSSSNHRRSK 180

Query: 181 --NSSNNSNNNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 225
             NS N+ N++  N+ QSFSPSTPPPTSVNYRTAKRRKGIPHRAPMG L+++Y
Sbjct: 181 SNNSHNSHNSHSSNKFQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVLEY 233

[Close]

BLAST of Carg23391 vs. ExPASy TrEMBL
Match: A0A6J1CW01 (uncharacterized protein LOC111014906 OS=Momordica charantia OX=3673 GN=LOC111014906 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 8.7e-109
Identity = 203/226 (89.82%), Postives = 209/226 (92.48%), Query Frame = 0


Query: 1   MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH 60
           MGAGGPD EDNRWPPWLKPLLRESFFVQCK HIDSHKSECNMYCLDCMNGALCSLCL +H
Sbjct: 1   MGAGGPDDEDNRWPPWLKPLLRESFFVQCKLHIDSHKSECNMYCLDCMNGALCSLCLAYH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITA--AASDSEESYSSSNHRRSNSSNN 180
           EVCERSLLDSFRFCSLGCKIVGTSR   KKRV   A  AASDSE SYSSSNHRRSNS+NN
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGTSRGFPKKRVAAVAAMAASDSEGSYSSSNHRRSNSNNN 180

Query: 181 SNNNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 225
           SN+   N+V SFSPSTPPPTSVNYRTAKRRKGIPHRAPMG L+I+Y
Sbjct: 181 SNS---NKVHSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVIEY 223

[Close]

BLAST of Carg23391 vs. ExPASy TrEMBL
Match: A0A6J1E6F5 (uncharacterized protein LOC111431038 OS=Cucurbita moschata OX=3662 GN=LOC111431038 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.9e-108
Identity = 200/233 (85.84%), Postives = 210/233 (90.13%), Query Frame = 0


Query: 1   MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH 60
           MGAGGPD EDNRWPPWLKPLLRE+FFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLN H
Sbjct: 1   MGAGGPDDEDNRWPPWLKPLLRETFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGTSRSSQKKR---------VTITAAASDSEESYSSSNHR 180
           EVCERSLLDSFRFCSLGCKIVGTSRS QKKR         V  T A SDSE+SYSSSNHR
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGTSRSFQKKRVAGVVGMAGVAATMAVSDSEDSYSSSNHR 180

Query: 181 RSNSSNNSNNNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 225
           RS S+N+ N+   N+ QSFSPSTPPPTS+NYRTAKRRKGIPHRAPMG L+++Y
Sbjct: 181 RSKSNNSHNS---NKFQSFSPSTPPPTSINYRTAKRRKGIPHRAPMGGLVLEY 230

[Close]

BLAST of Carg23391 vs. TAIR 10
Match: AT4G17900.1 (PLATZ transcription factor family protein )

HSP 1 Score: 307.4 bits (786), Expect = 9.6e-84
Identity = 155/220 (70.45%), Postives = 171/220 (77.73%), Query Frame = 0


Query: 1   MGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHH 60
           MGAGGP+ E+NRWPPWLKPLL+E FFV CK H DSHKSECNMYCLDC NG LCSLCL HH
Sbjct: 21  MGAGGPEEEENRWPPWLKPLLKEQFFVHCKFHGDSHKSECNMYCLDCTNGPLCSLCLAHH 80

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHR IQIRRSSYHDVIRV+EIQK LDI G+QTY+INSA+VVFLNERPQPRPGKGVTNTC
Sbjct: 81  KDHRTIQIRRSSYHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPRPGKGVTNTC 140

Query: 121 EVCERSLL-DSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHRRSNSSNNS 180
           +VC RSL+ DSFRFCSLGCKI GTSR  +K R  +     DS             SS+ +
Sbjct: 141 KVCYRSLVDDSFRFCSLGCKIAGTSRGFEKGRENLLMETEDS-------------SSSIA 200

Query: 181 NNNDINRVQSFSPSTPP-PTSVNYRTAKRRKGIPHRAPMG 219
              +I  +QSFSPSTPP  TS N R  KRRKGIPHR+PMG
Sbjct: 201 IGKNITNLQSFSPSTPPLTTSSNCRIVKRRKGIPHRSPMG 227

[Close]

BLAST of Carg23391 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 300.1 bits (767), Expect = 1.5e-81
Identity = 157/221 (71.04%), Postives = 177/221 (80.09%), Query Frame = 0


Query: 5   GPDVEDNR-WPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHHKDH 64
           G + E N+ +P WLKPLLRE FFVQCK H DSHKSECNMYCLDC NG LCSLCL+ HKDH
Sbjct: 2   GAEEETNKTYPHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDH 61

Query: 65  RAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVC 124
            AIQIRRSSYHDVIRVSEIQK LDI+GVQTY+INSA+VVFLNERPQPRPGKGV NTCEVC
Sbjct: 62  HAIQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEVC 121

Query: 125 ERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHRRSNSSNNSNNND 184
            RSL+DSFRFCSLGCKI G S+   KKR   T   SDS++SYSS++  R   +++  NN 
Sbjct: 122 YRSLVDSFRFCSLGCKISGISK---KKRKEWTNNLSDSDDSYSSTSIGRLKKNDDIMNN- 181

Query: 185 INRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 225
                SF+PSTPP ++VN R AKRRKGIPHRAP G LII+Y
Sbjct: 182 -----SFTPSTPPLSAVNRRIAKRRKGIPHRAPFGGLIIEY 213

[Close]

BLAST of Carg23391 vs. TAIR 10
Match: AT1G32700.2 (PLATZ transcription factor family protein )

HSP 1 Score: 243.0 bits (619), Expect = 2.2e-64
Identity = 130/183 (71.04%), Postives = 147/183 (80.33%), Query Frame = 0


Query: 42  MYCLDCMNGALCSLCLNHHKDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARV 101
           MYCLDC NG LCSLCL+ HKDH AIQIRRSSYHDVIRVSEIQK LDI+GVQTY+INSA+V
Sbjct: 1   MYCLDCTNGPLCSLCLSFHKDHHAIQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKV 60

Query: 102 VFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDS 161
           VFLNERPQPRPGKGV NTCEVC RSL+DSFRFCSLGCKI G S+   KKR   T   SDS
Sbjct: 61  VFLNERPQPRPGKGVINTCEVCYRSLVDSFRFCSLGCKISGISK---KKRKEWTNNLSDS 120

Query: 162 EESYSSSNHRRSNSSNNSNNNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLI 221
           ++SYSS++  R   +++  NN      SF+PSTPP ++VN R AKRRKGIPHRAP G LI
Sbjct: 121 DDSYSSTSIGRLKKNDDIMNN------SFTPSTPPLSAVNRRIAKRRKGIPHRAPFGGLI 174

Query: 222 IQY 225
           I+Y
Sbjct: 181 IEY 174

[Close]

BLAST of Carg23391 vs. TAIR 10
Match: AT4G17900.2 (PLATZ transcription factor family protein )

HSP 1 Score: 228.4 bits (581), Expect = 5.7e-60
Identity = 122/179 (68.16%), Postives = 135/179 (75.42%), Query Frame = 0


Query: 42  MYCLDCMNGALCSLCLNHHKDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARV 101
           MYCLDC NG LCSLCL HHKDHR IQIRRSSYHDVIRV+EIQK LDI G+QTY+INSA+V
Sbjct: 1   MYCLDCTNGPLCSLCLAHHKDHRTIQIRRSSYHDVIRVNEIQKYLDIGGIQTYVINSAKV 60

Query: 102 VFLNERPQPRPGKGVTNTCEVCERSLL-DSFRFCSLGCKIVGTSRSSQKKRVTITAAASD 161
           VFLNERPQPRPGKGVTNTC+VC RSL+ DSFRFCSLGCKI GTSR  +K R  +     D
Sbjct: 61  VFLNERPQPRPGKGVTNTCKVCYRSLVDDSFRFCSLGCKIAGTSRGFEKGRENLLMETED 120

Query: 162 SEESYSSSNHRRSNSSNNSNNNDINRVQSFSPSTPP-PTSVNYRTAKRRKGIPHRAPMG 219
           S             SS+ +   +I  +QSFSPSTPP  TS N R  KRRKGIPHR+PMG
Sbjct: 121 S-------------SSSIAIGKNITNLQSFSPSTPPLTTSSNCRIVKRRKGIPHRSPMG 166

[Close]

BLAST of Carg23391 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein )

HSP 1 Score: 228.0 bits (580), Expect = 7.4e-60
Identity = 124/237 (52.32%), Postives = 156/237 (65.82%), Query Frame = 0


Query: 9   EDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHHKDHRAIQI 68
           ED   PPWL P+LR S+FV C  H+DS+K+ECN++CLDC   A CS CL  HKDHR +QI
Sbjct: 11  EDYTSPPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVKHKDHRVVQI 70

Query: 69  RRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLL 128
           RRSSYH+V+RV+EIQK +DI+ VQTYIINSA++VFLNERPQPR GKGVTNTCE+C RSLL
Sbjct: 71  RRSSYHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIGKGVTNTCEICCRSLL 130

Query: 129 DSFRFCSLGCKIVGTSR-------SSQKKRVTITAAASDSEESYSSSNHRRSNSSN---- 188
           DSFRFCSLGCK+ G  R       S + K        S+S+E+ + +  R++N+ N    
Sbjct: 131 DSFRFCSLGCKLGGMRRGDLSLTFSLKGKHGREYLGGSESDEATTPTKMRKTNAFNRLMS 190

Query: 189 ------------------NSNNNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAP 217
                              S+++      SFSP TPP    N+R + RRKG+PHRAP
Sbjct: 191 GLSISTVRFDDYGPNGDQRSSSSGDEGGFSFSPGTPP--IYNHRNSSRRKGVPHRAP 245

The following BLAST results are available for this feature:

BLAST of Carg23391 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596729.1	3.1e-124	100.00	hypothetical protein SDJN03_09909, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022924573.1	8.9e-124	99.55	uncharacterized protein LOC111431990 [Cucurbita moschata]	[more]
XP_023539507.1	4.9e-122	98.21	uncharacterized protein LOC111800150, partial [Cucurbita pepo subsp. pepo]	[more]
XP_023005603.1	1.4e-121	98.21	uncharacterized protein LOC111498542 [Cucurbita maxima]	[more]
XP_023553129.1	1.4e-108	87.39	uncharacterized protein LOC111810627 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg23391 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	1.9e-31	49.61	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Carg23391 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ECV3	4.3e-124	99.55	uncharacterized protein LOC111431990 OS=Cucurbita moschata OX=3662 GN=LOC1114319...	[more]
A0A6J1L2M6	6.9e-122	98.21	uncharacterized protein LOC111498542 OS=Cucurbita maxima OX=3661 GN=LOC111498542...	[more]
A0A6J1HQK4	8.7e-109	86.27	uncharacterized protein LOC111465191 OS=Cucurbita maxima OX=3661 GN=LOC111465191...	[more]
A0A6J1CW01	8.7e-109	89.82	uncharacterized protein LOC111014906 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1E6F5	1.9e-108	85.84	uncharacterized protein LOC111431038 OS=Cucurbita moschata OX=3662 GN=LOC1114310...	[more]

BLAST of Carg23391 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17900.1	9.6e-84	70.45	PLATZ transcription factor family protein	[more]
AT1G32700.1	1.5e-81	71.04	PLATZ transcription factor family protein	[more]
AT1G32700.2	2.2e-64	71.04	PLATZ transcription factor family protein	[more]
AT4G17900.2	5.7e-60	68.16	PLATZ transcription factor family protein	[more]
AT1G21000.1	7.4e-60	52.32	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 69..140 e-value: 2.4E-30 score: 105.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..224
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 1..220
None	No IPR available	PANTHER	PTHR31065:SF64	SUBFAMILY NOT NAMED	coord: 1..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23391-RA	Carg23391-RA	mRNA