Carg23329 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23329
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	HNHc domain-containing protein
Location	Carg_Chr06: 10456240 .. 10459561 (-)
RNA-Seq Expression	Carg23329
Synteny	Carg23329

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCAATTCACCGCACACAGTCGGGTTAAGTTGTTGCTCAACGGAGACGGAGTGCCATTCGGTTCAGAACCAAAAGATCGTTCGAGACAAAAGCTCAGATCACTACGAACCCTTAAGCGAAGAACTCCTTTATCCGGTGCCTCCTCCACTGGACTTTCCCCTTCGTCGTCCTCGGCTTCAGCTTTGAGGAAATCCGCTCAGCGTGTCGGTGTGAGGGGTGAGAGCGTTAGCGGAGACGACGCCATTCTTGATATTGACTATGATTACGAGTTTGAGAGCGACGATCTGGCTTGCTTCAGAGGTCTCGTCTTGGATATTTCCTACAGGTAATGTTATTCCACTTCATACCCACTTGGTTATAGGGAGATTATTGGAAAGCTGTTTGAATATTAATTGTGGCATAATCGGAAGTTAGTTAATTGTAGATGGCTATAAATAGGGGGAATTCGGAGTTTAAGAATTAAGCATAATTTTAGGAATTGGTGTACTGTAGATCTTAGGAAAGAGATAGCCATTACCTTTTGATATGTCCTGTATCCGGTACCATGCACTGAATAAAACGAACAAACACAAATAAACTTGACTCCATTTCTGTATGTGGAATGGAGTGACCTCCACTTTTTTGTGTGTACTTGTTTCATGTTGCTTTGATATCTCCATATTGTTTGTATGACTGGAAAGGTTGTAATTTATCTTTTGCTGTTGATTTCCTTGCTTTAGGCCAGTTAACGTTGTTTGTTGGAAGCGTGCAATTTGTTTGGAGTTCATGGAGAAGGTTTGACCAATCTCTTTTACATATTATTTTCCATTGGTTTTCGCCATGAATAGGGAAATATGTCCAACTTCCGAGAGCGAAAAACAAAATGGGAATTGCTAAATGCTTTGATATTTAAATCCAAAGGGAATAAGGAAACTGTCAGTTCCACAAAAGATGACGATCCTTTTCTTGCTGACGATAAAAGGACACAGAACTAAAGAAAAAATGGCAATGAATACGATGTTGGGTGTCCACGCTGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATCCCAATGGAGTTAGTATTCCTCACTTATAAACCCATGATCACATCCTAAATTAGTCGATGTGGGACTTCCATCATCCAACACCTCCCCTCGAACAAAGTGCGCCTCCCCTTAATCGAGGCTCGACTCCTTTGGAGTCTTAGTCATTTTTGACGGCCTTCGAGGAGGGCTTAGCTCCTTTTCTTTAAGAGTTCTTTGTTCGATATTTGAGGATTTACCAATCTATTGGCACGACTAAGTTTAGGGCATGGCTCTGATACCATGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATGCCAATGGAGTTAATATTCCTCACTTATAAACCCATGATCACACCCTAAATTAGTCGATGTGGGACTTCCATCATCCAACACACGCTATCATGTAAAACTATTTGCAGAAAGTCTGTGAATTTTAAATCTTGATTTTGGATTTCAAAAGGCTTAGATAAGGGCTTGGTTCTTATCAATTGATTGAGGTTGATCGAGTAGTTTTGAATCCACTGTAAATGTTAACATTGCATGTTTCGATATGTCTATCTCAAACCTTATTTGCTTTTCCAGGCTGATGTATTGGAATACTATGACCAGACTGTGAGTTCTCCAAGTGGATCCTTCTATATACCAGCAGTCTTAAGGGTATGCATCAAACATTTATCTGATTCATTCATGGACTTTTTTTCACTGGATTTTACTTATTTCAATCTTTACTTCCATAACCAGGAGAAGCTCAACACTGAACTCATCTTTTTTTACTTGAGTCTTGTATTTTTCTAAGGCCTTTGAAGTAAGTAACTATGCCATCTCCCCTGTCAGGTTCCTCATTTATTGCAAGTTGTAAAGAGAAGAAGAATCAAGCAGTCTTTGAGTCGTAAAAACATCCTTTATCGGGACAATTACACTTGTCAGTAAGTTGCTCAATTTATCATTTAAATTTGAAATGGAAGAAGTTATTTTGAGATGCTTTGCTAATTTTATGATTCGATTACATAATCATTTTAATTGTAGTTTCATTAAAAACCTGAATAGCCTCTGAATTTCATTAAAAACCTGAATAGCCTCTGAATTTCATTAAAAACCTAATTAATCCTTTATCGGGACAATTACACTTGTCCCTTTAGTAGATTTAGGTCCTTTTAAATTCTCAACACTACTTTCAATAGGAAGGCTTAACTAGACTATTAATATTGAAATGAGGAAGATATTTGCTATTTTTCTTTATTTTTTCGTTGCCTTAAATGGGCCTCTTCAACAGGTATTGTTCATCACATGAGAGTTTGACGATTGACCATGTTTTGCCCGTGTCTCGGGGTGGAGAATGGACATGGGAAAATCTGGTGAGTTATCTATCCGGTAGATATCAATATAAGATTACAAATGCTCAACTGAATTTTCAATCATCGAAAGACTGAAGACGTCTTTGTTGAATCTTCACACCTGATCCAGGCTGACCCCTGTCCTCTCATGTTATAACAGGTGGCCGCCTGCGTGAAATGCAATTCAAAGAAAGGGCAAAAAACTGTTGAAGAAGCAAATATGAAGCTGAAAAAGACTCCCAAGGTAATATTATATTATGTTTCGTTTACCATGTTTGATCTCTTCAACATCGCGGCATCCCTTTTCAGAAGAGGGTTGAGTCCTCCCGTCTCTCAAGTCCTTGAACTTAAAGTCTCGTTTCTGTAGTAGACCATTTGTTAACATCTCCTAAATCATTTTTTATTAACATAATGACCCTGAACCCTTGTTGCAGCCCGAGCTACGAATCCTCTGCTTTATTTTTGGTGTCTCAATCCATCTAGTTAAGGCTTATTTATGGGTTTTGACACCTTGAATTTGCAGGCACCAAAAGATTATGACATACTTGCCATTCCTCTAACCAGTACCGCAATAAAGATGTTGAAACTCAGGAAGGGGACCCCTGAAGAATGGCGTCAATATCTGTCGAGTGAGCAATGACGTACACTCATAATGGCACTTGTAAATTCTTCTTTGAACAAATTGCACATATCATACATACACTTGTTTCTTCTAATACTTCGGCACCTTCAAACTAATTTATTCTATCATTACTCCCACAAGCATTTTGCATTTTGCTTCTTAATTTGGATTGATTTTCTAAAACATACTTTAGAAAAATTAAGTTTGA

mRNA sequence

ATGGCCCAATTCACCGCACACAGTCGGGTTAAGTTGTTGCTCAACGGAGACGGAGTGCCATTCGGTTCAGAACCAAAAGATCGTTCGAGACAAAAGCTCAGATCACTACGAACCCTTAAGCGAAGAACTCCTTTATCCGGTGCCTCCTCCACTGGACTTTCCCCTTCGTCGTCCTCGGCTTCAGCTTTGAGGAAATCCGCTCAGCGTGTCGGTGTGAGGGGTGAGAGCGTTAGCGGAGACGACGCCATTCTTGATATTGACTATGATTACGAGTTTGAGAGCGACGATCTGGCTTGCTTCAGAGGTCTCGTCTTGGATATTTCCTACAGGCCAGTTAACGTTGTTTGTTGGAAGCGTGCAATTTGTTTGGAGTTCATGGAGAAGGCTGATGTATTGGAATACTATGACCAGACTGTGAGTTCTCCAAGTGGATCCTTCTATATACCAGCAGTCTTAAGGGTTCCTCATTTATTGCAAGTTGTAAAGAGAAGAAGAATCAAGCAGTCTTTGAGTCGTAAAAACATCCTTTATCGGGACAATTACACTTGTCAGTATTGTTCATCACATGAGAGTTTGACGATTGACCATGTTTTGCCCGTGTCTCGGGGTGGAGAATGGACATGGGAAAATCTGGTGGCCGCCTGCGTGAAATGCAATTCAAAGAAAGGGCAAAAAACTGTTGAAGAAGCAAATATGAAGCTGAAAAAGACTCCCAAGGCACCAAAAGATTATGACATACTTGCCATTCCTCTAACCAGTACCGCAATAAAGATGTTGAAACTCAGGAAGGGGACCCCTGAAGAATGGCGTCAATATCTGTCGAGTGAGCAATGACGTACACTCATAATGGCACTTGTAAATTCTTCTTTGAACAAATTGCACATATCATACATACACTTGTTTCTTCTAATACTTCGGCACCTTCAAACTAATTTATTCTATCATTACTCCCACAAGCATTTTGCATTTTGCTTCTTAATTTGGATTGATTTTCTAAAACATACTTTAGAAAAATTAAGTTTGA

Coding sequence (CDS)

ATGGCCCAATTCACCGCACACAGTCGGGTTAAGTTGTTGCTCAACGGAGACGGAGTGCCATTCGGTTCAGAACCAAAAGATCGTTCGAGACAAAAGCTCAGATCACTACGAACCCTTAAGCGAAGAACTCCTTTATCCGGTGCCTCCTCCACTGGACTTTCCCCTTCGTCGTCCTCGGCTTCAGCTTTGAGGAAATCCGCTCAGCGTGTCGGTGTGAGGGGTGAGAGCGTTAGCGGAGACGACGCCATTCTTGATATTGACTATGATTACGAGTTTGAGAGCGACGATCTGGCTTGCTTCAGAGGTCTCGTCTTGGATATTTCCTACAGGCCAGTTAACGTTGTTTGTTGGAAGCGTGCAATTTGTTTGGAGTTCATGGAGAAGGCTGATGTATTGGAATACTATGACCAGACTGTGAGTTCTCCAAGTGGATCCTTCTATATACCAGCAGTCTTAAGGGTTCCTCATTTATTGCAAGTTGTAAAGAGAAGAAGAATCAAGCAGTCTTTGAGTCGTAAAAACATCCTTTATCGGGACAATTACACTTGTCAGTATTGTTCATCACATGAGAGTTTGACGATTGACCATGTTTTGCCCGTGTCTCGGGGTGGAGAATGGACATGGGAAAATCTGGTGGCCGCCTGCGTGAAATGCAATTCAAAGAAAGGGCAAAAAACTGTTGAAGAAGCAAATATGAAGCTGAAAAAGACTCCCAAGGCACCAAAAGATTATGACATACTTGCCATTCCTCTAACCAGTACCGCAATAAAGATGTTGAAACTCAGGAAGGGGACCCCTGAAGAATGGCGTCAATATCTGTCGAGTGAGCAATGA

Protein sequence

MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSASALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLKKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ

Homology

[Close]

BLAST of Carg23329 vs. NCBI nr
Match: KAG6597719.1 (hypothetical protein SDJN03_10899, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029166.1 hypothetical protein SDJN02_10351, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 549.7 bits (1415), Expect = 1.5e-152
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA
Sbjct: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60

Query: 61  SALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVVCWKRA 120
           SALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVVCWKRA
Sbjct: 61  SALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVVCWKRA 120

Query: 121 ICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNILYRDN 180
           ICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNILYRDN
Sbjct: 121 ICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNILYRDN 180

Query: 181 YTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLKKTPKA 240
           YTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLKKTPKA
Sbjct: 181 YTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLKKTPKA 240

Query: 241 PKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 278
           PKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ
Sbjct: 241 PKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 277

[Close]

BLAST of Carg23329 vs. NCBI nr
Match: XP_022932702.1 (uncharacterized protein LOC111439170 [Cucurbita moschata] >XP_022932703.1 uncharacterized protein LOC111439170 [Cucurbita moschata] >XP_022972084.1 uncharacterized protein LOC111470725 [Cucurbita maxima] >XP_023539770.1 uncharacterized protein LOC111800353 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 546.6 bits (1407), Expect = 1.2e-151
Identity = 275/277 (99.28%), Postives = 276/277 (99.64%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFTAHSRVKLLLNGDGVPFGSEPKDRSR KLRS+RTLKRRTPLSGASSTGLSPSSSSA
Sbjct: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRHKLRSVRTLKRRTPLSGASSTGLSPSSSSA 60

Query: 61  SALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVVCWKRA 120
           SALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVVCWKRA
Sbjct: 61  SALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVVCWKRA 120

Query: 121 ICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNILYRDN 180
           ICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNILYRDN
Sbjct: 121 ICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNILYRDN 180

Query: 181 YTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLKKTPKA 240
           YTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLKKTPKA
Sbjct: 181 YTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLKKTPKA 240

Query: 241 PKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 278
           PKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ
Sbjct: 241 PKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 277

[Close]

BLAST of Carg23329 vs. NCBI nr
Match: XP_038905692.1 (uncharacterized protein LOC120091663 [Benincasa hispida])

HSP 1 Score: 509.2 bits (1310), Expect = 2.2e-140
Identity = 259/282 (91.84%), Postives = 266/282 (94.33%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFTAHSRVKLLLNGDGVPFGSEPKDR R KLR +RTLKRR PLSG      SPS+SSA
Sbjct: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRFRYKLRLVRTLKRRIPLSGP-----SPSTSSA 60

Query: 61  SALRKSAQ-----RVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVV 120
           SALRKSAQ     RVGVRGESVSGDDAI+D+DYDYEFE+DDLACFRGLVLDISYRPVNVV
Sbjct: 61  SALRKSAQHAAEVRVGVRGESVSGDDAIVDLDYDYEFETDDLACFRGLVLDISYRPVNVV 120

Query: 121 CWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNI 180
           CWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIK SLSRKNI
Sbjct: 121 CWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNI 180

Query: 181 LYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLK 240
           LYRDNYTCQYCSSHESLTIDHVLP+SRGGEWTWENLVAACV+CNSKKGQKTVEEANMKLK
Sbjct: 181 LYRDNYTCQYCSSHESLTIDHVLPISRGGEWTWENLVAACVQCNSKKGQKTVEEANMKLK 240

Query: 241 KTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 278
           KTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ
Sbjct: 241 KTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 277

[Close]

BLAST of Carg23329 vs. NCBI nr
Match: XP_022152374.1 (uncharacterized protein LOC111020122 [Momordica charantia])

HSP 1 Score: 480.7 bits (1236), Expect = 8.4e-132
Identity = 249/282 (88.30%), Postives = 260/282 (92.20%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFT  +RVKLLLNGDGVPFGSE KDR R KLRS+    RR PLS A+STG+SPS+SSA
Sbjct: 1   MAQFTTLNRVKLLLNGDGVPFGSESKDRLRYKLRSV----RRIPLS-AASTGISPSASSA 60

Query: 61  SALRKSAQ-----RVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVV 120
           SALRKSAQ     RVGVR ESVS D AI+ +D DYEFESDDLACFRGLVLDISYRPVNVV
Sbjct: 61  SALRKSAQHVAEMRVGVRDESVSDDGAIVGLDCDYEFESDDLACFRGLVLDISYRPVNVV 120

Query: 121 CWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNI 180
           CWKRAICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLRVPHLLQVVKRRRIK SLSRKNI
Sbjct: 121 CWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNI 180

Query: 181 LYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLK 240
           LYRDNYTCQYCSSH+SLTIDHVLP+SRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLK
Sbjct: 181 LYRDNYTCQYCSSHDSLTIDHVLPISRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLK 240

Query: 241 KTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 278
           KTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLS+EQ
Sbjct: 241 KTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSNEQ 277

[Close]

BLAST of Carg23329 vs. NCBI nr
Match: XP_008465340.1 (PREDICTED: uncharacterized protein LOC103502982 [Cucumis melo] >KAA0051262.1 HNH endonuclease [Cucumis melo var. makuwa] >TYK29998.1 HNH endonuclease [Cucumis melo var. makuwa])

HSP 1 Score: 476.1 bits (1224), Expect = 2.1e-130
Identity = 249/283 (87.99%), Postives = 256/283 (90.46%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFTAHSRVKLLLNGDG+P GSE KDR R KLRS+R   RR PLS  SS     S+SS 
Sbjct: 1   MAQFTAHSRVKLLLNGDGLPCGSESKDRFRYKLRSVRA--RRFPLSAPSS-----STSST 60

Query: 61  SALRKSAQ-----RVGVRGESVS-GDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNV 120
           SALRKS Q     RVGVR ESV+ GDDAI+  DYDYEFESDDLACFRGLVLDISYRPVNV
Sbjct: 61  SALRKSTQHAAEVRVGVRDESVTGGDDAIVGFDYDYEFESDDLACFRGLVLDISYRPVNV 120

Query: 121 VCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKN 180
           VCWKRAICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLRVPHLLQVVKRRRIK SLSRKN
Sbjct: 121 VCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKN 180

Query: 181 ILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL 240
           ILYRDNYTCQYCSSHESLTIDHVLP+SRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL
Sbjct: 181 ILYRDNYTCQYCSSHESLTIDHVLPISRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL 240

Query: 241 KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 278
           KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ
Sbjct: 241 KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 276

[Close]

BLAST of Carg23329 vs. ExPASy TrEMBL
Match: A0A6J1F2H9 (uncharacterized protein LOC111439170 OS=Cucurbita moschata OX=3662 GN=LOC111439170 PE=4 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 6.0e-152
Identity = 275/277 (99.28%), Postives = 276/277 (99.64%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFTAHSRVKLLLNGDGVPFGSEPKDRSR KLRS+RTLKRRTPLSGASSTGLSPSSSSA
Sbjct: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRHKLRSVRTLKRRTPLSGASSTGLSPSSSSA 60

Query: 61  SALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVVCWKRA 120
           SALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVVCWKRA
Sbjct: 61  SALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVVCWKRA 120

Query: 121 ICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNILYRDN 180
           ICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNILYRDN
Sbjct: 121 ICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNILYRDN 180

Query: 181 YTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLKKTPKA 240
           YTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLKKTPKA
Sbjct: 181 YTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLKKTPKA 240

Query: 241 PKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 278
           PKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ
Sbjct: 241 PKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 277

[Close]

BLAST of Carg23329 vs. ExPASy TrEMBL
Match: A0A6J1IAG4 (uncharacterized protein LOC111470725 OS=Cucurbita maxima OX=3661 GN=LOC111470725 PE=4 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 6.0e-152
Identity = 275/277 (99.28%), Postives = 276/277 (99.64%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFTAHSRVKLLLNGDGVPFGSEPKDRSR KLRS+RTLKRRTPLSGASSTGLSPSSSSA
Sbjct: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRHKLRSVRTLKRRTPLSGASSTGLSPSSSSA 60

Query: 61  SALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVVCWKRA 120
           SALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVVCWKRA
Sbjct: 61  SALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVVCWKRA 120

Query: 121 ICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNILYRDN 180
           ICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNILYRDN
Sbjct: 121 ICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNILYRDN 180

Query: 181 YTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLKKTPKA 240
           YTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLKKTPKA
Sbjct: 181 YTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLKKTPKA 240

Query: 241 PKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 278
           PKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ
Sbjct: 241 PKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 277

[Close]

BLAST of Carg23329 vs. ExPASy TrEMBL
Match: A0A6J1DFU6 (uncharacterized protein LOC111020122 OS=Momordica charantia OX=3673 GN=LOC111020122 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 4.1e-132
Identity = 249/282 (88.30%), Postives = 260/282 (92.20%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFT  +RVKLLLNGDGVPFGSE KDR R KLRS+    RR PLS A+STG+SPS+SSA
Sbjct: 1   MAQFTTLNRVKLLLNGDGVPFGSESKDRLRYKLRSV----RRIPLS-AASTGISPSASSA 60

Query: 61  SALRKSAQ-----RVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVV 120
           SALRKSAQ     RVGVR ESVS D AI+ +D DYEFESDDLACFRGLVLDISYRPVNVV
Sbjct: 61  SALRKSAQHVAEMRVGVRDESVSDDGAIVGLDCDYEFESDDLACFRGLVLDISYRPVNVV 120

Query: 121 CWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNI 180
           CWKRAICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLRVPHLLQVVKRRRIK SLSRKNI
Sbjct: 121 CWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNI 180

Query: 181 LYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLK 240
           LYRDNYTCQYCSSH+SLTIDHVLP+SRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLK
Sbjct: 181 LYRDNYTCQYCSSHDSLTIDHVLPISRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLK 240

Query: 241 KTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 278
           KTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLS+EQ
Sbjct: 241 KTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSNEQ 277

[Close]

BLAST of Carg23329 vs. ExPASy TrEMBL
Match: A0A5D3E2H2 (HNH endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold734G00280 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 1.0e-130
Identity = 249/283 (87.99%), Postives = 256/283 (90.46%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFTAHSRVKLLLNGDG+P GSE KDR R KLRS+R   RR PLS  SS     S+SS 
Sbjct: 1   MAQFTAHSRVKLLLNGDGLPCGSESKDRFRYKLRSVRA--RRFPLSAPSS-----STSST 60

Query: 61  SALRKSAQ-----RVGVRGESVS-GDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNV 120
           SALRKS Q     RVGVR ESV+ GDDAI+  DYDYEFESDDLACFRGLVLDISYRPVNV
Sbjct: 61  SALRKSTQHAAEVRVGVRDESVTGGDDAIVGFDYDYEFESDDLACFRGLVLDISYRPVNV 120

Query: 121 VCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKN 180
           VCWKRAICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLRVPHLLQVVKRRRIK SLSRKN
Sbjct: 121 VCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKN 180

Query: 181 ILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL 240
           ILYRDNYTCQYCSSHESLTIDHVLP+SRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL
Sbjct: 181 ILYRDNYTCQYCSSHESLTIDHVLPISRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL 240

Query: 241 KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 278
           KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ
Sbjct: 241 KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 276

[Close]

BLAST of Carg23329 vs. ExPASy TrEMBL
Match: A0A1S3CNK0 (uncharacterized protein LOC103502982 OS=Cucumis melo OX=3656 GN=LOC103502982 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 1.0e-130
Identity = 249/283 (87.99%), Postives = 256/283 (90.46%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFTAHSRVKLLLNGDG+P GSE KDR R KLRS+R   RR PLS  SS     S+SS 
Sbjct: 1   MAQFTAHSRVKLLLNGDGLPCGSESKDRFRYKLRSVRA--RRFPLSAPSS-----STSST 60

Query: 61  SALRKSAQ-----RVGVRGESVS-GDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNV 120
           SALRKS Q     RVGVR ESV+ GDDAI+  DYDYEFESDDLACFRGLVLDISYRPVNV
Sbjct: 61  SALRKSTQHAAEVRVGVRDESVTGGDDAIVGFDYDYEFESDDLACFRGLVLDISYRPVNV 120

Query: 121 VCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKN 180
           VCWKRAICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLRVPHLLQVVKRRRIK SLSRKN
Sbjct: 121 VCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKN 180

Query: 181 ILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL 240
           ILYRDNYTCQYCSSHESLTIDHVLP+SRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL
Sbjct: 181 ILYRDNYTCQYCSSHESLTIDHVLPISRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL 240

Query: 241 KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 278
           KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ
Sbjct: 241 KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 276

[Close]

BLAST of Carg23329 vs. TAIR 10
Match: AT2G23840.1 (HNH endonuclease )

HSP 1 Score: 335.1 bits (858), Expect = 5.3e-92
Identity = 179/285 (62.81%), Postives = 215/285 (75.44%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MA F+A  R+KLL + DG+ FG + +D+ RQ   SL      +PL     + L   +   
Sbjct: 1   MAHFSA--RLKLLSSNDGLSFGVDSRDQFRQ---SLYMAGGGSPLVPIRMSRLKFCARIF 60

Query: 61  SALRKSAQRVGVRGESVSGDDAILDIDYD---YEFESDD--------LACFRGLVLDISY 120
           S+     +R  +R   +   +  LDID D   ++F+ DD        L+CFRGLVLDISY
Sbjct: 61  SSYSFPYKRKKIR--DLDNTEKNLDIDEDNDEWDFDGDDDGLETDDHLSCFRGLVLDISY 120

Query: 121 RPVNVVCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQS 180
           RPVNVVCWKRAICLE+M+KADVLEYYDQTVSSP+GSFYIPAVLRVPHLLQVVKRRR+K S
Sbjct: 121 RPVNVVCWKRAICLEYMDKADVLEYYDQTVSSPTGSFYIPAVLRVPHLLQVVKRRRVKNS 180

Query: 181 LSRKNILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEE 240
           LSRKNIL RD+YTCQYCSS E+LTIDHV+PVSRGGEWTW+NLVAAC +CNS+KGQKT +E
Sbjct: 181 LSRKNILLRDDYTCQYCSSRENLTIDHVMPVSRGGEWTWQNLVAACSRCNSRKGQKTADE 240

Query: 241 ANMKLKKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLS 275
           A+MKL K PK PKDYDI+AIPLT+ AI+ML+  KG PEEWRQYL+
Sbjct: 241 AHMKLLKVPKEPKDYDIVAIPLTNAAIRMLRSNKGMPEEWRQYLA 278

The following BLAST results are available for this feature:

BLAST of Carg23329 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597719.1	1.5e-152	100.00	hypothetical protein SDJN03_10899, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022932702.1	1.2e-151	99.28	uncharacterized protein LOC111439170 [Cucurbita moschata] >XP_022932703.1 unchar...	[more]
XP_038905692.1	2.2e-140	91.84	uncharacterized protein LOC120091663 [Benincasa hispida]	[more]
XP_022152374.1	8.4e-132	88.30	uncharacterized protein LOC111020122 [Momordica charantia]	[more]
XP_008465340.1	2.1e-130	87.99	PREDICTED: uncharacterized protein LOC103502982 [Cucumis melo] >KAA0051262.1 HNH...	[more]

BLAST of Carg23329 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg23329 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F2H9	6.0e-152	99.28	uncharacterized protein LOC111439170 OS=Cucurbita moschata OX=3662 GN=LOC1114391...	[more]
A0A6J1IAG4	6.0e-152	99.28	uncharacterized protein LOC111470725 OS=Cucurbita maxima OX=3661 GN=LOC111470725...	[more]
A0A6J1DFU6	4.1e-132	88.30	uncharacterized protein LOC111020122 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A5D3E2H2	1.0e-130	87.99	HNH endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold734G002...	[more]
A0A1S3CNK0	1.0e-130	87.99	uncharacterized protein LOC103502982 OS=Cucumis melo OX=3656 GN=LOC103502982 PE=...	[more]

BLAST of Carg23329 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23840.1	5.3e-92	62.81	HNH endonuclease	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003615	HNH nuclease	SMART	SM00507	HNH_5	coord: 170..220 e-value: 8.6E-14 score: 61.8
IPR003615	HNH nuclease	CDD	cd00085	HNHc	coord: 172..223 e-value: 2.34482E-13 score: 61.3335
IPR029471	HNH endonuclease 5	PFAM	PF14279	HNH_5	coord: 183..234 e-value: 9.0E-16 score: 57.5
None	No IPR available	GENE3D	1.10.30.50		coord: 158..247 e-value: 4.4E-24 score: 86.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..65
None	No IPR available	PANTHER	PTHR33877	SLL1193 PROTEIN	coord: 62..275
None	No IPR available	PANTHER	PTHR33877:SF2	SLL1193 PROTEIN	coord: 62..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23329-RA	Carg23329-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
molecular_function	GO:0004519	endonuclease activity